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Conserved domains on  [gi|665842432|ref|WP_031210549|]
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MULTISPECIES: YeeE/YedE family protein [Marinobacter]

Protein Classification

YeeE/YedE family protein( domain architecture ID 10789399)

YeeE/YedE family protein similar to Escherichia coli proteins YeeE and YedE, which are membrane proteins that constitute transport components for sulfur-containing compounds

TCDB:  9.B.102

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF6691 super family cl46265
Family of unknown function (DUF6691); This family of proteins is functionally uncharacterized. ...
 3-137 2.15e-47

Family of unknown function (DUF6691); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 137 and 165 amino acids in length. Proteins in this family are related to the thiosulfate transporter, but appear to be about half the length. Suggesting this family may operate as a dimer to make a functional transporter.


The actual alignment was detected with superfamily member pfam20398:

Pssm-ID: 480605  Cd Length: 142  Bit Score: 149.99  E-value: 2.15e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665842432    3 YSVTSLLAGLIFGLGLMVSGMANPEKVLGFLDIAGLWDPSLAFVMGGAIIVGLVAFAVARRRTLSFLGFTMKMPANNRIE 82
Cdd:pfam20398   2 HIIMALLIGLLFGLGLIVSGMTDPAKVIGFLDLAGAWDPSLGFVMGGAILVGLVAFRLARGRDASLLGAPMRLPTATGID 81

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 665842432   83 PRLVIGSMMFGIGWGIAGFCPGPALVALGAGEIKAVVFVASMVAGMMAFEVIERI 137
Cdd:pfam20398  82 RRLVLGSLAFGAGWGLAGFCPGPALASLATGGSKPLIFVAAMLAGMALFEFLERL 136
 
Name Accession Description Interval E-value
DUF6691 pfam20398
Family of unknown function (DUF6691); This family of proteins is functionally uncharacterized. ...
 3-137 2.15e-47

Family of unknown function (DUF6691); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 137 and 165 amino acids in length. Proteins in this family are related to the thiosulfate transporter, but appear to be about half the length. Suggesting this family may operate as a dimer to make a functional transporter.


Pssm-ID: 466547  Cd Length: 142  Bit Score: 149.99  E-value: 2.15e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665842432    3 YSVTSLLAGLIFGLGLMVSGMANPEKVLGFLDIAGLWDPSLAFVMGGAIIVGLVAFAVARRRTLSFLGFTMKMPANNRIE 82
Cdd:pfam20398   2 HIIMALLIGLLFGLGLIVSGMTDPAKVIGFLDLAGAWDPSLGFVMGGAILVGLVAFRLARGRDASLLGAPMRLPTATGID 81

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 665842432   83 PRLVIGSMMFGIGWGIAGFCPGPALVALGAGEIKAVVFVASMVAGMMAFEVIERI 137
Cdd:pfam20398  82 RRLVLGSLAFGAGWGLAGFCPGPALASLATGGSKPLIFVAAMLAGMALFEFLERL 136
YedE COG2391
Uncharacterized membrane protein YedE/YeeE, contains two sulfur transport domains [General ...
 5-136 3.99e-20

Uncharacterized membrane protein YedE/YeeE, contains two sulfur transport domains [General function prediction only];


Pssm-ID: 441956  Cd Length: 143  Bit Score: 80.66  E-value: 3.99e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665842432   5 VTSLLAGLIFGLGL---------------MVSGMANPEKVLGFLDIAglwdpsLAFVMGGAIIVGLVAFAVARrrtlsfl 69
Cdd:COG2391    7 WMALLGGLLIGLGLallllgngriagisgILSGMLDPAKVLGFLDRA------WRFVFGGGLVVGPLLYRLVA------- 73

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 665842432  70 gFTMKMPANNRIEPRLVIGSMMFGIGWGIAGFC-PGPALVALGAGEIKAVVFVASMVAGMMAFEVIER 136
Cdd:COG2391   74 -PHLPAITITIDPPRLVIGGLLVGIGTRLGGGCtSGHGVCGLGRLSPRSLVATLAFMAGGFLTVFLVR 140
 
Name Accession Description Interval E-value
DUF6691 pfam20398
Family of unknown function (DUF6691); This family of proteins is functionally uncharacterized. ...
 3-137 2.15e-47

Family of unknown function (DUF6691); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 137 and 165 amino acids in length. Proteins in this family are related to the thiosulfate transporter, but appear to be about half the length. Suggesting this family may operate as a dimer to make a functional transporter.


Pssm-ID: 466547  Cd Length: 142  Bit Score: 149.99  E-value: 2.15e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665842432    3 YSVTSLLAGLIFGLGLMVSGMANPEKVLGFLDIAGLWDPSLAFVMGGAIIVGLVAFAVARRRTLSFLGFTMKMPANNRIE 82
Cdd:pfam20398   2 HIIMALLIGLLFGLGLIVSGMTDPAKVIGFLDLAGAWDPSLGFVMGGAILVGLVAFRLARGRDASLLGAPMRLPTATGID 81

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 665842432   83 PRLVIGSMMFGIGWGIAGFCPGPALVALGAGEIKAVVFVASMVAGMMAFEVIERI 137
Cdd:pfam20398  82 RRLVLGSLAFGAGWGLAGFCPGPALASLATGGSKPLIFVAAMLAGMALFEFLERL 136
YedE COG2391
Uncharacterized membrane protein YedE/YeeE, contains two sulfur transport domains [General ...
 5-136 3.99e-20

Uncharacterized membrane protein YedE/YeeE, contains two sulfur transport domains [General function prediction only];


Pssm-ID: 441956  Cd Length: 143  Bit Score: 80.66  E-value: 3.99e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665842432   5 VTSLLAGLIFGLGL---------------MVSGMANPEKVLGFLDIAglwdpsLAFVMGGAIIVGLVAFAVARrrtlsfl 69
Cdd:COG2391    7 WMALLGGLLIGLGLallllgngriagisgILSGMLDPAKVLGFLDRA------WRFVFGGGLVVGPLLYRLVA------- 73

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 665842432  70 gFTMKMPANNRIEPRLVIGSMMFGIGWGIAGFC-PGPALVALGAGEIKAVVFVASMVAGMMAFEVIER 136
Cdd:COG2391   74 -PHLPAITITIDPPRLVIGGLLVGIGTRLGGGCtSGHGVCGLGRLSPRSLVATLAFMAGGFLTVFLVR 140
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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