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Conserved domains on  [gi|695636940|ref|WP_032613339|]
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MULTISPECIES: SLC13 family permease [Pseudomonas]

Protein Classification

transporter permease( domain architecture ID 229430)

transporter permease similar to ArsB/NhaD family permeases, which typically contain 8-13 transmembrane helices and can function either independently as a chemiosmotic transporter or as a channel-forming subunit of an ATP-driven anion pump

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ArsB_NhaD_permease super family cl21473
Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, ...
1-482 1.17e-134

Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices and can function either independently as a chemiosmotic transporter or as a channel-forming subunit of an ATP-driven anion pump.


The actual alignment was detected with superfamily member PRK09821:

Pssm-ID: 473875  Cd Length: 454  Bit Score: 396.33  E-value: 1.17e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940   1 MTPLMLMVVAGAGIALLLFLVLKYKFQPFVALMLVSIIVALVAGVKPADLVATIEGGMGKTLGHIAIIIALGAMIGRIIE 80
Cdd:PRK09821   1 MSTILLLCIALAGVILLLLLVIKAKVQPFVALLLVSLLVALAAGIPAGEVGKVMIAGMGGVLGSVTIIIGLGAMLGRMIE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940  81 LSGGAEALAKTLINRFGNRRTPLALTVAGFMVGIPVFFEVGVIILMPLAYGVARAARKPLLIFALPMCAALLAVHAFLPP 160
Cdd:PRK09821  81 HSGGAESLANYFTRKLGDKRTIAALTLAAFILGIPVFFDVGFIILAPIIYGFAKVAKVSPLKFGLPVAGIMLTVHVALPP 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 161 HPGAVAAASQLGADLGRVLMLGIPIVAVLCMIGYFVAGRMTRKTYPMTddiraevygphvtnedleawarndySGVREAT 240
Cdd:PRK09821 161 HPGPVAAAGLLHADIGWLTIIGIAISIPVGIVGYFAAKIINRRQYALS-------------------------VEVLEQM 215
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 241 ETRTMGVEESASSLASKLPPAPapgfGLIIALILLPIVLILMGTLATTMLPATSTLRAVLTVLGAPLVALLIDTLLCAWL 320
Cdd:PRK09821 216 QLAPASEEGATKLSDKINPPGA----ALITSLIVIPIAIIMLGTVSATLLPPSHPLLGTLQLIGSPMVALLIALVLAFWL 291
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 321 LGSRRGWSRTQVSDVIGSALPGVAMVILIAGAGGVFGKVLVDTGIGAVVSEALRNTGLPVLALGFLLTLLLRAVQGSTTV 400
Cdd:PRK09821 292 LALRRGWSLQHTSDVMGSALPTAAVVILVTGAGGVFGKVLVESGVGKALANMLQMIHLPLIPAAFIISLALRASQGSATV 371
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 401 ALVTTAGILSPliATLDLSANHLALLCLAMGGGGLAMSHINDAGYWMFTKLAGLNVADGLRTWTVLVTLLGTLGFVITLL 480
Cdd:PRK09821 372 AILTTSGLLSE--AVMGLNPIQCVLVTLAACFGGLGLSHVNDSGFWIVTKYLGLSVADGLKTWTVLTTILGLTGFLITWC 449

                 ..
gi 695636940 481 LW 482
Cdd:PRK09821 450 VW 451
 
Name Accession Description Interval E-value
PRK09821 PRK09821
putative transporter; Provisional
1-482 1.17e-134

putative transporter; Provisional


Pssm-ID: 182094  Cd Length: 454  Bit Score: 396.33  E-value: 1.17e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940   1 MTPLMLMVVAGAGIALLLFLVLKYKFQPFVALMLVSIIVALVAGVKPADLVATIEGGMGKTLGHIAIIIALGAMIGRIIE 80
Cdd:PRK09821   1 MSTILLLCIALAGVILLLLLVIKAKVQPFVALLLVSLLVALAAGIPAGEVGKVMIAGMGGVLGSVTIIIGLGAMLGRMIE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940  81 LSGGAEALAKTLINRFGNRRTPLALTVAGFMVGIPVFFEVGVIILMPLAYGVARAARKPLLIFALPMCAALLAVHAFLPP 160
Cdd:PRK09821  81 HSGGAESLANYFTRKLGDKRTIAALTLAAFILGIPVFFDVGFIILAPIIYGFAKVAKVSPLKFGLPVAGIMLTVHVALPP 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 161 HPGAVAAASQLGADLGRVLMLGIPIVAVLCMIGYFVAGRMTRKTYPMTddiraevygphvtnedleawarndySGVREAT 240
Cdd:PRK09821 161 HPGPVAAAGLLHADIGWLTIIGIAISIPVGIVGYFAAKIINRRQYALS-------------------------VEVLEQM 215
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 241 ETRTMGVEESASSLASKLPPAPapgfGLIIALILLPIVLILMGTLATTMLPATSTLRAVLTVLGAPLVALLIDTLLCAWL 320
Cdd:PRK09821 216 QLAPASEEGATKLSDKINPPGA----ALITSLIVIPIAIIMLGTVSATLLPPSHPLLGTLQLIGSPMVALLIALVLAFWL 291
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 321 LGSRRGWSRTQVSDVIGSALPGVAMVILIAGAGGVFGKVLVDTGIGAVVSEALRNTGLPVLALGFLLTLLLRAVQGSTTV 400
Cdd:PRK09821 292 LALRRGWSLQHTSDVMGSALPTAAVVILVTGAGGVFGKVLVESGVGKALANMLQMIHLPLIPAAFIISLALRASQGSATV 371
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 401 ALVTTAGILSPliATLDLSANHLALLCLAMGGGGLAMSHINDAGYWMFTKLAGLNVADGLRTWTVLVTLLGTLGFVITLL 480
Cdd:PRK09821 372 AILTTSGLLSE--AVMGLNPIQCVLVTLAACFGGLGLSHVNDSGFWIVTKYLGLSVADGLKTWTVLTTILGLTGFLITWC 449

                 ..
gi 695636940 481 LW 482
Cdd:PRK09821 450 VW 451
GntT COG2610
H+/gluconate symporter GntT or related permease, GntP/DsdX family [Carbohydrate transport and ...
5-485 4.07e-114

H+/gluconate symporter GntT or related permease, GntP/DsdX family [Carbohydrate transport and metabolism];


Pssm-ID: 442022 [Multi-domain]  Cd Length: 440  Bit Score: 343.25  E-value: 4.07e-114
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940   5 MLMVVAGAGIALLLFLVLKYKFQPFVALMLVSIIVALVAGVKPADLVATIEGGMGKTLGHIAIIIALGAMIGRIIELSGG 84
Cdd:COG2610    2 MLLLGLLLAIALLILLIIKFKLHPFLALLLAALLVGLLAGMPLAKIVTSIMTGFGGTLGSIGLVIGLGAMLGKLLEDSGA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940  85 AEALAKTLINRFGNRRTPLALTVAGFMVGIPVFFEVGVIILMPLAYGVARAARKPLLIFALPMCAALLAVHAFLPPHPGA 164
Cdd:COG2610   82 AERIADTIIKKFGEKRAPLALVLAGFILGIPVFFDVGFVILAPLAFSLARRAGISKLLIGLALAAGLSTTHMLVPPTPGP 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 165 VAAASQLGADLGRVLMLGIPIVAVLCMIGYFVAGRMTRKTYPMtddiraevygphvtnedleawarndysgVREATETRT 244
Cdd:COG2610  162 LAAAGILGADLGAVILLGLIVAIPALIVGYLYAKWLGKKAPVP----------------------------APEGLAGEE 213
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 245 MGVEESASSLasklppapaPGFGLIIALILLPIVLILMGTLAtTMLPATSTLRAVLTVLGAPLVALLIDTLLCAWLLgsR 324
Cdd:COG2610  214 DEEEEDDEEL---------PSFGLALLPILLPIVLILLGTIA-DLLPKDSALVQVLAFIGDPIIALLIGVLVAILLL--R 281
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 325 RGWSRTQVSDVIGSALPGVAMVILIAGAGGVFGKVLVDTGIGAVVSEALRNTGLPVLALGFLLTLLLRAVQGSTTVALVT 404
Cdd:COG2610  282 RGLSREELMKILNEGLKPAGLILLITGAGGAFGAVLAASGIGDAIADALSGLGLPPLLLAFLIAALLRGATGSATVAMIT 361
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 405 TAGILSPLIATLDLsanHLALLCLAMGGGGLAMSHINDAGYWMFTKLAGLNVADGLRTWTVLVTLLGTLGFVITLLLWPF 484
Cdd:COG2610  362 AAGILAPLLLALGV---SPELLVLAIGAGSGGLSHVNDSGFWLVKEYFGLTVKETLKTWTVMTTIIGVVGLVLVLILSLL 438

                 .
gi 695636940 485 V 485
Cdd:COG2610  439 F 439
GntP_permease pfam02447
GntP family permease; This is a family of integral membrane permeases that are involved in ...
5-481 8.63e-111

GntP family permease; This is a family of integral membrane permeases that are involved in gluconate uptake. E. coli contains several members of this family including GntU, a low affinity transporter and GntT, a high affinity transporter.


Pssm-ID: 308194 [Multi-domain]  Cd Length: 440  Bit Score: 335.02  E-value: 8.63e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940    5 MLMVVAGAGIALLLFLVLKYKFQPFVALMLVSIIVALVAGVKPADLVATIEGGMGKTLGHIAIIIALGAMIGRIIELSGG 84
Cdd:pfam02447   1 MPLLIVAIGIILLLLLIIKFKVNPFVALLLVSLGVGLASGMPLDKVLKSIEAGFGGTLGSLAIIIGLGAMLGKLLADSGG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940   85 AEALAKTLINRFGNRRTPLALTVAGFMVGIPVFFEVGVIILMPLAYGVARAARKPLLIFALPMCAALLAVHAFLPPHPGA 164
Cdd:pfam02447  81 AERIATTLIKKFGKKRVQWAVVLAGFIVGIPLFFEVGFVLLIPLVFAIAREAKISLLKLGIPLAAGLAVVHGFLPPHPGP 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940  165 VAAASQLGADLGRVLMLGIPIVAVLCMIGYFVAGRMTRKTYPMTDDIRAEVYGPHVTNEDLeawarndysgvreatetrt 244
Cdd:pfam02447 161 TAIAGLLGADIGKVLLYGLIVAIPTVIIAGPLFGKFLGRIEPLEPEFAELGATKSFDEKEL------------------- 221
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940  245 mgveesasslasklppapaPGFGLIIALILLPIVLILMGTLATTMLPATSTLRAVLTVLGAPLVALLIDTLLCAWLLGSR 324
Cdd:pfam02447 222 -------------------PSFGLSLFTILLPVILMAIKTIAELFLPKGHAALEVVEFIGNPVIALLIALLVAIYTLGLR 282
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940  325 RGWSRTQVSDVIGSALPGVAMVILIAGAGGVFGKVLVDTGIGAVVSEALRNTGLPVLALGFLLTLLLRAVQGSTTVALVT 404
Cdd:pfam02447 283 RGMSMQQLMDILGSALKPIAMILLIIGAGGAFKQVLVDSGVGDALAELLSGMHISPILLAWIVAALLRIAQGSATVAAIT 362
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 695636940  405 TAGILSPLIATldLSANHLALLCLAMGGGGLAMSHINDAGYWMFTKLAGLNVADGLRTWTVLVTLLGTLGFVITLLL 481
Cdd:pfam02447 363 AAGIVSPIIAQ--LPGVNPALLVLATGAGSLILSHVNDAGFWLFKEYFGLTVKETLKTWTVLETILSVVGLIGTLLL 437
gntP TIGR00791
gluconate transporter; This family includes known gluconate transporters of E. coli and ...
5-481 4.17e-96

gluconate transporter; This family includes known gluconate transporters of E. coli and Bacillus species as well as an idonate transporter from E. coli. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 129873  Cd Length: 440  Bit Score: 297.35  E-value: 4.17e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940    5 MLMVVAGAGIALLLFLVLKYKFQPFVALMLVSIIVALVAGVKPADLVATIEGGMGKTLGHIAIIIALGAMIGRIIELSGG 84
Cdd:TIGR00791   1 MPLVIVALGIVLLLLLIMKFKLNTFVALLVVSFGVGLASGMPLDKVVHSIEAGIGGTLGFLALIVGLGAMLGKLLADSGA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940   85 AEALAKTLINRFGNRRTPLALTVAGFMVGIPVFFEVGVIILMPLAYGVARAARKPLLIFALPMCAALLAVHAFLPPHPGA 164
Cdd:TIGR00791  81 AQRIALTLLAKFGKSRVQWAVVIAGLIVGLALFFEVGFVLLIPLVFSIAAEAKISLLKLGIPMVAALSVAHGFLPPHPGP 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940  165 VAAASQLGADLGRVLMLGIpIVAVLCMIgyfvagrmtrktypmtddIRAEVYGPHVTNEDLEAWARNDYSgvreateTRT 244
Cdd:TIGR00791 161 TAIANEYGADIGEVLLYGL-IVAIPTVI------------------IAGPLFTKFLGRIVPPSPEASLGS-------QKT 214
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940  245 MGVEEsasslasklppapAPGFGLIIALILLPIVLILMGTLATTMLPATSTLRAVLTVLGAPLVALLIDTLLCAWLLGSR 324
Cdd:TIGR00791 215 FSEEE-------------MPSFGISLFTALLPVILMAVKTIAELTLPKGSTAYEVVEFIGNPSTAMFIALLVAIYTLGIR 281
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940  325 RGWSRTQVSDVIGSALPGVAMVILIAGAGGVFGKVLVDTGIGAVVSEALRNTGLPVLALGFLLTLLLRAVQGSTTVALVT 404
Cdd:TIGR00791 282 RGMPMDQVMDSCGSAIGSIAMILLIIGGGGAFKQVLIDSGVGDYIAELMSGMNISPILMAWLIAAILRIALGSATVAALT 361
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 695636940  405 TAGILSPLIATldLSANHLALLCLAMGGGGLAMSHINDAGYWMFTKLAGLNVADGLRTWTVLVTLLGTLGFVITLLL 481
Cdd:TIGR00791 362 AAGLVAPLLGQ--YSGVNPALLVLATGAGSVIASHVNDAGFWLFKEYFGLTVKETLKTWTLLETIISVVGLIGVLLL 436
 
Name Accession Description Interval E-value
PRK09821 PRK09821
putative transporter; Provisional
1-482 1.17e-134

putative transporter; Provisional


Pssm-ID: 182094  Cd Length: 454  Bit Score: 396.33  E-value: 1.17e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940   1 MTPLMLMVVAGAGIALLLFLVLKYKFQPFVALMLVSIIVALVAGVKPADLVATIEGGMGKTLGHIAIIIALGAMIGRIIE 80
Cdd:PRK09821   1 MSTILLLCIALAGVILLLLLVIKAKVQPFVALLLVSLLVALAAGIPAGEVGKVMIAGMGGVLGSVTIIIGLGAMLGRMIE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940  81 LSGGAEALAKTLINRFGNRRTPLALTVAGFMVGIPVFFEVGVIILMPLAYGVARAARKPLLIFALPMCAALLAVHAFLPP 160
Cdd:PRK09821  81 HSGGAESLANYFTRKLGDKRTIAALTLAAFILGIPVFFDVGFIILAPIIYGFAKVAKVSPLKFGLPVAGIMLTVHVALPP 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 161 HPGAVAAASQLGADLGRVLMLGIPIVAVLCMIGYFVAGRMTRKTYPMTddiraevygphvtnedleawarndySGVREAT 240
Cdd:PRK09821 161 HPGPVAAAGLLHADIGWLTIIGIAISIPVGIVGYFAAKIINRRQYALS-------------------------VEVLEQM 215
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 241 ETRTMGVEESASSLASKLPPAPapgfGLIIALILLPIVLILMGTLATTMLPATSTLRAVLTVLGAPLVALLIDTLLCAWL 320
Cdd:PRK09821 216 QLAPASEEGATKLSDKINPPGA----ALITSLIVIPIAIIMLGTVSATLLPPSHPLLGTLQLIGSPMVALLIALVLAFWL 291
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 321 LGSRRGWSRTQVSDVIGSALPGVAMVILIAGAGGVFGKVLVDTGIGAVVSEALRNTGLPVLALGFLLTLLLRAVQGSTTV 400
Cdd:PRK09821 292 LALRRGWSLQHTSDVMGSALPTAAVVILVTGAGGVFGKVLVESGVGKALANMLQMIHLPLIPAAFIISLALRASQGSATV 371
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 401 ALVTTAGILSPliATLDLSANHLALLCLAMGGGGLAMSHINDAGYWMFTKLAGLNVADGLRTWTVLVTLLGTLGFVITLL 480
Cdd:PRK09821 372 AILTTSGLLSE--AVMGLNPIQCVLVTLAACFGGLGLSHVNDSGFWIVTKYLGLSVADGLKTWTVLTTILGLTGFLITWC 449

                 ..
gi 695636940 481 LW 482
Cdd:PRK09821 450 VW 451
GntT COG2610
H+/gluconate symporter GntT or related permease, GntP/DsdX family [Carbohydrate transport and ...
5-485 4.07e-114

H+/gluconate symporter GntT or related permease, GntP/DsdX family [Carbohydrate transport and metabolism];


Pssm-ID: 442022 [Multi-domain]  Cd Length: 440  Bit Score: 343.25  E-value: 4.07e-114
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940   5 MLMVVAGAGIALLLFLVLKYKFQPFVALMLVSIIVALVAGVKPADLVATIEGGMGKTLGHIAIIIALGAMIGRIIELSGG 84
Cdd:COG2610    2 MLLLGLLLAIALLILLIIKFKLHPFLALLLAALLVGLLAGMPLAKIVTSIMTGFGGTLGSIGLVIGLGAMLGKLLEDSGA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940  85 AEALAKTLINRFGNRRTPLALTVAGFMVGIPVFFEVGVIILMPLAYGVARAARKPLLIFALPMCAALLAVHAFLPPHPGA 164
Cdd:COG2610   82 AERIADTIIKKFGEKRAPLALVLAGFILGIPVFFDVGFVILAPLAFSLARRAGISKLLIGLALAAGLSTTHMLVPPTPGP 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 165 VAAASQLGADLGRVLMLGIPIVAVLCMIGYFVAGRMTRKTYPMtddiraevygphvtnedleawarndysgVREATETRT 244
Cdd:COG2610  162 LAAAGILGADLGAVILLGLIVAIPALIVGYLYAKWLGKKAPVP----------------------------APEGLAGEE 213
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 245 MGVEESASSLasklppapaPGFGLIIALILLPIVLILMGTLAtTMLPATSTLRAVLTVLGAPLVALLIDTLLCAWLLgsR 324
Cdd:COG2610  214 DEEEEDDEEL---------PSFGLALLPILLPIVLILLGTIA-DLLPKDSALVQVLAFIGDPIIALLIGVLVAILLL--R 281
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 325 RGWSRTQVSDVIGSALPGVAMVILIAGAGGVFGKVLVDTGIGAVVSEALRNTGLPVLALGFLLTLLLRAVQGSTTVALVT 404
Cdd:COG2610  282 RGLSREELMKILNEGLKPAGLILLITGAGGAFGAVLAASGIGDAIADALSGLGLPPLLLAFLIAALLRGATGSATVAMIT 361
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 405 TAGILSPLIATLDLsanHLALLCLAMGGGGLAMSHINDAGYWMFTKLAGLNVADGLRTWTVLVTLLGTLGFVITLLLWPF 484
Cdd:COG2610  362 AAGILAPLLLALGV---SPELLVLAIGAGSGGLSHVNDSGFWLVKEYFGLTVKETLKTWTVMTTIIGVVGLVLVLILSLL 438

                 .
gi 695636940 485 V 485
Cdd:COG2610  439 F 439
GntP_permease pfam02447
GntP family permease; This is a family of integral membrane permeases that are involved in ...
5-481 8.63e-111

GntP family permease; This is a family of integral membrane permeases that are involved in gluconate uptake. E. coli contains several members of this family including GntU, a low affinity transporter and GntT, a high affinity transporter.


Pssm-ID: 308194 [Multi-domain]  Cd Length: 440  Bit Score: 335.02  E-value: 8.63e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940    5 MLMVVAGAGIALLLFLVLKYKFQPFVALMLVSIIVALVAGVKPADLVATIEGGMGKTLGHIAIIIALGAMIGRIIELSGG 84
Cdd:pfam02447   1 MPLLIVAIGIILLLLLIIKFKVNPFVALLLVSLGVGLASGMPLDKVLKSIEAGFGGTLGSLAIIIGLGAMLGKLLADSGG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940   85 AEALAKTLINRFGNRRTPLALTVAGFMVGIPVFFEVGVIILMPLAYGVARAARKPLLIFALPMCAALLAVHAFLPPHPGA 164
Cdd:pfam02447  81 AERIATTLIKKFGKKRVQWAVVLAGFIVGIPLFFEVGFVLLIPLVFAIAREAKISLLKLGIPLAAGLAVVHGFLPPHPGP 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940  165 VAAASQLGADLGRVLMLGIPIVAVLCMIGYFVAGRMTRKTYPMTDDIRAEVYGPHVTNEDLeawarndysgvreatetrt 244
Cdd:pfam02447 161 TAIAGLLGADIGKVLLYGLIVAIPTVIIAGPLFGKFLGRIEPLEPEFAELGATKSFDEKEL------------------- 221
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940  245 mgveesasslasklppapaPGFGLIIALILLPIVLILMGTLATTMLPATSTLRAVLTVLGAPLVALLIDTLLCAWLLGSR 324
Cdd:pfam02447 222 -------------------PSFGLSLFTILLPVILMAIKTIAELFLPKGHAALEVVEFIGNPVIALLIALLVAIYTLGLR 282
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940  325 RGWSRTQVSDVIGSALPGVAMVILIAGAGGVFGKVLVDTGIGAVVSEALRNTGLPVLALGFLLTLLLRAVQGSTTVALVT 404
Cdd:pfam02447 283 RGMSMQQLMDILGSALKPIAMILLIIGAGGAFKQVLVDSGVGDALAELLSGMHISPILLAWIVAALLRIAQGSATVAAIT 362
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 695636940  405 TAGILSPLIATldLSANHLALLCLAMGGGGLAMSHINDAGYWMFTKLAGLNVADGLRTWTVLVTLLGTLGFVITLLL 481
Cdd:pfam02447 363 AAGIVSPIIAQ--LPGVNPALLVLATGAGSLILSHVNDAGFWLFKEYFGLTVKETLKTWTVLETILSVVGLIGTLLL 437
gntP TIGR00791
gluconate transporter; This family includes known gluconate transporters of E. coli and ...
5-481 4.17e-96

gluconate transporter; This family includes known gluconate transporters of E. coli and Bacillus species as well as an idonate transporter from E. coli. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 129873  Cd Length: 440  Bit Score: 297.35  E-value: 4.17e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940    5 MLMVVAGAGIALLLFLVLKYKFQPFVALMLVSIIVALVAGVKPADLVATIEGGMGKTLGHIAIIIALGAMIGRIIELSGG 84
Cdd:TIGR00791   1 MPLVIVALGIVLLLLLIMKFKLNTFVALLVVSFGVGLASGMPLDKVVHSIEAGIGGTLGFLALIVGLGAMLGKLLADSGA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940   85 AEALAKTLINRFGNRRTPLALTVAGFMVGIPVFFEVGVIILMPLAYGVARAARKPLLIFALPMCAALLAVHAFLPPHPGA 164
Cdd:TIGR00791  81 AQRIALTLLAKFGKSRVQWAVVIAGLIVGLALFFEVGFVLLIPLVFSIAAEAKISLLKLGIPMVAALSVAHGFLPPHPGP 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940  165 VAAASQLGADLGRVLMLGIpIVAVLCMIgyfvagrmtrktypmtddIRAEVYGPHVTNEDLEAWARNDYSgvreateTRT 244
Cdd:TIGR00791 161 TAIANEYGADIGEVLLYGL-IVAIPTVI------------------IAGPLFTKFLGRIVPPSPEASLGS-------QKT 214
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940  245 MGVEEsasslasklppapAPGFGLIIALILLPIVLILMGTLATTMLPATSTLRAVLTVLGAPLVALLIDTLLCAWLLGSR 324
Cdd:TIGR00791 215 FSEEE-------------MPSFGISLFTALLPVILMAVKTIAELTLPKGSTAYEVVEFIGNPSTAMFIALLVAIYTLGIR 281
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940  325 RGWSRTQVSDVIGSALPGVAMVILIAGAGGVFGKVLVDTGIGAVVSEALRNTGLPVLALGFLLTLLLRAVQGSTTVALVT 404
Cdd:TIGR00791 282 RGMPMDQVMDSCGSAIGSIAMILLIIGGGGAFKQVLIDSGVGDYIAELMSGMNISPILMAWLIAAILRIALGSATVAALT 361
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 695636940  405 TAGILSPLIATldLSANHLALLCLAMGGGGLAMSHINDAGYWMFTKLAGLNVADGLRTWTVLVTLLGTLGFVITLLL 481
Cdd:TIGR00791 362 AAGLVAPLLGQ--YSGVNPALLVLATGAGSVIASHVNDAGFWLFKEYFGLTVKETLKTWTLLETIISVVGLIGVLLL 436
PRK10472 PRK10472
low affinity gluconate transporter; Provisional
1-485 1.11e-81

low affinity gluconate transporter; Provisional


Pssm-ID: 182485  Cd Length: 445  Bit Score: 260.07  E-value: 1.11e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940   1 MTPLMLMVVAGAGIALLLFLVLKYKFQPFVALMLVSIIVALVAGVKPADLVATIEGGMGKTLGHIAIIIALGAMIGRIIE 80
Cdd:PRK10472   1 MSTLTLVLTAVGSVLLLLFLVMKARMHAFVALMVVSMGAGLFSGMPLDKIAATMEKGMGGTLGFLAVVVALGAMFGKILH 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940  81 LSGGAEALAKTLINRFGNRRTPLALTVAGFMVGIPVFFEVGVIILMPLAYGVARAARKPLLIFALPMCAALLAVHAFLPP 160
Cdd:PRK10472  81 ETGAVDQIAVKMLKSFGHSRAHYAIGLAGLICALPLFFEVAIVLLISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLLP 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 161 HPGAVAAASQLGADLGRVLMLGIpIVAVLCMIgyfvagrmtrktypmtddIRAEVYGPHVTnedleawarndysgvreat 240
Cdd:PRK10472 161 GPAPMLLASQMNADFGWMILIGL-CAAIPGMI------------------IAGPLWGNFIS------------------- 202
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 241 etRTMGVEESASSLASKLPPAPAPGFGLIIALILLPIVLILMGTLATTMLPATSTLRAVLTVLGAPLVALLIDTLLCAWL 320
Cdd:PRK10472 203 --RYVELHIPDDISEPHLGEGKMPSFGFSLSLILLPLVLVGLKTIAARFVPEGSTAYEWFEFIGHPFTAILVACLVAIYG 280
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 321 LGSRRGWSRTQVSDVIGSALPGVAMVILIAGAGGVFGKVLVDTGIGAVVSEALRNTGLPVLALGFLLTLLLRAVQGSTTV 400
Cdd:PRK10472 281 LAMRQGMPKDKVMEICGHALQPAGIILLVIGAGGVFKQVLVDSGVGPALGEALTGMGLPIAITCFVLAAAVRIIQGSATV 360
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 401 ALVTTAGILSPLIATLDLSANHLALLCLAMGGGGLAMSHINDAGYWMFTKLAGLNVADGLRTWTVLVTLLGTLGFVITLL 480
Cdd:PRK10472 361 ACLTAVGLVMPVIEQLNYSGAQMAALSICIAGGSIVVSHVNDAGFWLFGKFTGATEAQTLKTWTMMETILGTVGAIVGMI 440

                 ....*
gi 695636940 481 LWPFV 485
Cdd:PRK10472 441 AFQLL 445
PRK14984 PRK14984
gluconate transporter;
5-481 2.47e-75

gluconate transporter;


Pssm-ID: 237880  Cd Length: 438  Bit Score: 243.55  E-value: 2.47e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940   5 MLMVVAGAGIALLLFLVLKYKFQPFVALMLVSIIVALVAGVKPADLVATIEGGMGKTLGHIAIIIALGAMIGRIIELSGG 84
Cdd:PRK14984   1 MPLVIVAIGVALLLLLMIRFKMNGFIALVLVALAVGLMQGMPLDKVIGSIKAGVGGTLGSLALIMGFGAMLGKMLADCGG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940  85 AEALAKTLINRFGNRRTPLALTVAGFMVGIPVFFEVGVIILMPLAYGVARAARKPLLIFALPMCAALLAVHAFLPPHPGA 164
Cdd:PRK14984  81 AQRIATTLIAKFGKKHIQWAVVLTGFTVGFALFYEVGFVLMLPLVFTIAASANIPLLYVGVPMAAALSVTHGFLPPHPGP 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 165 VAAASQLGADLGRVLMLGIpIVAVLCMIgyfVAGRM-TRKTYPMTDDIRAEVYGPHVTNEdleawarndysgvreatetr 243
Cdd:PRK14984 161 TAIATIFNADMGKTLLYGT-ILAIPTVI---LAGPVyARFLKGIDKPIPEGLYSAKTFTE-------------------- 216
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 244 tmgveesasslasklppAPAPGFGLIIALILLPIVLILMGTLATTMLPATSTLRAVLTVLGAPLVALLIDTLLCAWLLGS 323
Cdd:PRK14984 217 -----------------EEMPSFGVSVWTSLVPVILMAMRAIAEMILPKGHAFLPVAEFLGDPVMATLIAVLIAMFTFGL 279
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 324 RRGWSRTQVSDVIGSALPGVAMVILIAGAGGVFGKVLVDTGIGAVVSEALRNTGLPVLALGFLLTLLLRAVQGSTTVALV 403
Cdd:PRK14984 280 NRGRSMDQINDTLVSSIKIIAMMLLIIGGGGAFKQVLVDSGVDKYIASMMHETNISPLLMAWSIAAVLRIALGSATVAAI 359
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 695636940 404 TTAGILSPLIATLDLSANhlaLLCLAMGGGGLAMSHINDAGYWMFTKLAGLNVADGLRTWTVLVTLLGTLGFVITLLL 481
Cdd:PRK14984 360 TAGGIAAPLIATTGVSPE---LMVIAVGSGSVIFSHVNDPGFWLFKEYFNLTIGETIKSWSMLETIISVCGLVGCLLL 434
PRK10034 PRK10034
gluconate transporter GntP;
13-485 3.10e-56

gluconate transporter GntP;


Pssm-ID: 182203  Cd Length: 447  Bit Score: 193.53  E-value: 3.10e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940  13 GIALLLFLVLKYKFQPFVALMLVSIIVALVAGVKPADLVATIEGGMGKTLGHIAIIIALGAMIGRIIELSGGAEALAKTL 92
Cdd:PRK10034  12 GIGLMLVLNLKFKINSMVALLVAALSVGMLAGMDLMKLLHTMKAGFGNTLGELAIIVVFGAVIGKLMVDSGAAHQIAHTL 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940  93 INRFGNRRTPLALTVAGFMVGIPVFFEVGVIILMPLAYGVARAARKPLLIFALPMCAALLAVHAFLPPHPGAVAAASQLG 172
Cdd:PRK10034  92 LARLGLRYVQLSVIIIGLIFGLAMFYEVAFIMLAPLVIVIAAEAKIPFLKLAIPAVAAATTAHSLFPPQPGPVALVNAYG 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 173 ADLGRVLMLG--IPIVAVLCmigyfvAGRMTRKTYPmtddiraevygphvtnedleawarndysGVREATETRTMGVEEs 250
Cdd:PRK10034 172 ADMGMVYIYGvlVTIPSVIC------AGLILPKFLG----------------------------NLERPTPSFLKADQP- 216
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 251 asslaskLPPAPAPGFGLIIALILLPIVLILMGTLATTMLPATSTLRAVLTVLGAPLVALLIDTLLCAWLLGSRRGWSRT 330
Cdd:PRK10034 217 -------VDMNNLPSFGTSILVPLIPAIIMISTTIANIWLVKGTPAWEVVNFIGSSPIAMFIAMVVAFVLFGTARGHDMQ 289
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 331 QVSDVIGSALPGVAMVILIAGAGGVFGKVLVDTGIGAVVSEALRNTGLPVLALGFLLTLLLRAVQGSTTVALVTTAGILS 410
Cdd:PRK10034 290 WVMNAFESAVKSIAMVILIIGAGGVLKQTIIDTGIGDTIGMLMSHGNISPYIMAWLITVLIRLATGQGVVSAMTAAGIIS 369
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 695636940 411 PLI---ATLDLSANHLALLCLAMGGGGLAMSHINDAGYWMFTKLAGLNVADGLRTWTVLVTLLGTLGFVITLLLWPFV 485
Cdd:PRK10034 370 AAIldpATGQLVGVNPALLVLATAAGSNTLTHINDASFWLFKGYFDLSVKDTLKTWGLLELVNSVVGLIIVLIISMVA 447
PRK09921 PRK09921
permease DsdX; Provisional
12-481 3.97e-45

permease DsdX; Provisional


Pssm-ID: 182147  Cd Length: 445  Bit Score: 163.78  E-value: 3.97e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940  12 AGIALLLFLVLKYKFQPFVALMLVSIIVALVAGVKPADLVATIEGGMGKTLGHIAIIIALGAMIGRIIELSGGAEALAKT 91
Cdd:PRK09921  13 ISIVLIVLTIVKFKFHPFLALLLASFFVGAMMGMGPLEMVNAIESGIGGTLGFLAAVIGLGTILGKMMEVSGAAERIGLT 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940  92 LiNRFGNRRTPLALTVAGFMVGIPVFFEVGVIILMPLAYGVARAARKPLLIFALPMCAALLAVHAFLPPHPGAVAAASQL 171
Cdd:PRK09921  93 L-QRCRWLSADVIMVLVGLICGITLFVEVGVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPPHPAALFVANKL 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 172 GADLGRVLMLGIPIVAVLCMIGYFVAGRMTRKTYPmtddiraevygphvtnedleawarndYSGVREATETRTMGVEESA 251
Cdd:PRK09921 172 GADIGSVIVYGLLVGLMASLVGGPLFLKFLGNRLP--------------------------FKPVPTEFADLEVRDEKTL 225
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 252 SSLASKLPPAPAPgfgliialillpIVLILMGTLATTMLPATSTLRAVLTVLGAPLVALLIDTLLCAWLLGSRRGWSRTQ 331
Cdd:PRK09921 226 PSLGATLFTVLLP------------IGLMLVKTVAELNMAKEGTLYTLLEFIGNPITAMFIAVFVAYYILGIRQHMGMGT 293
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940 332 VSDVIGSALPGVAMVILIAGAGGVFGKVLVDTGIGAVVSEALRNTGLPVLALGFLLTLLLRAVQGSTTVALVTTAGILSP 411
Cdd:PRK09921 294 LLTHTENGFGSIANILLIIGAGGAFNAILKSSGLADTLAVILSNMHMHPILLAWLVALILHAAVGSATVAMMGATAIVAP 373
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 695636940 412 LIATL-DLSAnhlALLCLAMGGGGLAMSHINDAGYWMFTKLAGLNVADGLRTWTVLVTLLGTLGFVITLLL 481
Cdd:PRK09921 374 MLPLYpDISP---EIIAIAIGSGAIGCTIVTDSLFWLVKQYCGATLNETFKYYTTATFIASVVALAGTFLL 441
CitMHS pfam03600
Citrate transporter;
37-196 1.85e-03

Citrate transporter;


Pssm-ID: 460985 [Multi-domain]  Cd Length: 342  Bit Score: 40.37  E-value: 1.85e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940   37 IIVALVAGVKPADLVATIEGGMGKTLGHIAIIIALGAMIGRIIELSGGAEALAKTLINRFGNRRTPL--ALTVAGFMVGI 114
Cdd:pfam03600  13 VVALLGAVLLVLLGVLTPEEALSGIDSPTILLLLGMMIIGAILERTGLFDRLALKLLRLAGGKPRRLlvALMLATALLSA 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695636940  115 PVFFEVGVIILMPLAYGVARAARKPLLIFALPMC----AALLAVHAFLPPHPGAVAAASQLGADLGRVLMLGIPIVAVLC 190
Cdd:pfam03600  93 FLSNDGTVLIMIPIVLALARRLGLPPSPLLIALAfaanIGGTATPIGDPPNIIIASALGLSFGDFGFFMFPPVGVALLLV 172

                  ....*.
gi 695636940  191 MIGYFV 196
Cdd:pfam03600 173 GLLPLL 178
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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