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Conserved domains on  [gi|695732334|ref|WP_032658829|]
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MULTISPECIES: colanic acid biosynthesis glycosyltransferase WcaC [Enterobacter]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
WcaC super family cl37369
colanic acid biosynthesis glycosyl transferase WcaC; This gene is one of the glycosyl ...
 1-405 0e+00

colanic acid biosynthesis glycosyl transferase WcaC; This gene is one of the glycosyl transferases involved in the biosynthesis of colanic acid, an exopolysaccharide expressed in Enterobacteraceae species.


The actual alignment was detected with superfamily member TIGR04015:

Pssm-ID: 274919  Cd Length: 405  Bit Score: 858.51  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334    1 MNILQFNVRLAEGGAAGVALDLHQRALQKGLQSRFIYGYGKGGKKSVSHDNFPQVHKHTPRLTSIANIALFRLFNRDLFG 80
Cdd:TIGR04015   1 MNILQFNVRLAEGGAAGVALDLHQRALQKGLTSHFVYGYGKGGKKSVSHDNYPQVIKHTPRLTSIANIALFRFFNRDLFG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334   81 NLNNLYRTVTRTTGPVVLHFHVLHSYWLNLEEVVAFCQKVQAHKPDTRFVWTLHDHWSVTGRCAFTDGCEGWKDNCQKCP 160
Cdd:TIGR04015  81 NLDNLYRTITRTPGPVVLHFHVLHSYWLNLAKVVAFCEKVKAHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCP 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334  161 TLSNYPPVKVDRAHQLVAGKRQLFRDMLSLGCTFISPSQHVADAFNSLYGAGRCQIINNGIDVATEAILAELTPVAETAG 240
Cdd:TIGR04015 161 TLDNYPPVKIDRAHQLVDGKRQRFRDMLALGCQFISPSQHVADAFNSLYGAGRCRIINNGIDVATEAILAELPPVPEGQG 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334  241 KPKIAIVAHDLRYDGKTNQQLVRDMMALGDKIELHTFGKFSPFEGANVVNHGFETDKRKLMSALNEMDALVFSSRVDNYP 320
Cdd:TIGR04015 241 KPKIAVVAHDLRYDGKTNQRLVRDMMALGDKIELHTFGKFSPFTGTNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYP 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334  321 LILCEALSIGVPVIATHSDAAREVLEKSGGKTFTEQEVLPLVQLPKAQIAEIVFGTDLESFRNRSRKAYSGQQMLEEYVS 400
Cdd:TIGR04015 321 LILCEALSIGVPVIATHSEAAQEVLAKSGGKTVSESEVLQLAQRSKPEIAQAVFGTTLEAFRARSREAYSGQQMLEEYVS 400


                  ....*
gi 695732334  401 FYQNL 405
Cdd:TIGR04015 401 FYQNL 405
 
Name Accession Description Interval E-value
WcaC TIGR04015
colanic acid biosynthesis glycosyl transferase WcaC; This gene is one of the glycosyl ...
 1-405 0e+00

colanic acid biosynthesis glycosyl transferase WcaC; This gene is one of the glycosyl transferases involved in the biosynthesis of colanic acid, an exopolysaccharide expressed in Enterobacteraceae species.


Pssm-ID: 274919  Cd Length: 405  Bit Score: 858.51  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334    1 MNILQFNVRLAEGGAAGVALDLHQRALQKGLQSRFIYGYGKGGKKSVSHDNFPQVHKHTPRLTSIANIALFRLFNRDLFG 80
Cdd:TIGR04015   1 MNILQFNVRLAEGGAAGVALDLHQRALQKGLTSHFVYGYGKGGKKSVSHDNYPQVIKHTPRLTSIANIALFRFFNRDLFG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334   81 NLNNLYRTVTRTTGPVVLHFHVLHSYWLNLEEVVAFCQKVQAHKPDTRFVWTLHDHWSVTGRCAFTDGCEGWKDNCQKCP 160
Cdd:TIGR04015  81 NLDNLYRTITRTPGPVVLHFHVLHSYWLNLAKVVAFCEKVKAHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCP 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334  161 TLSNYPPVKVDRAHQLVAGKRQLFRDMLSLGCTFISPSQHVADAFNSLYGAGRCQIINNGIDVATEAILAELTPVAETAG 240
Cdd:TIGR04015 161 TLDNYPPVKIDRAHQLVDGKRQRFRDMLALGCQFISPSQHVADAFNSLYGAGRCRIINNGIDVATEAILAELPPVPEGQG 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334  241 KPKIAIVAHDLRYDGKTNQQLVRDMMALGDKIELHTFGKFSPFEGANVVNHGFETDKRKLMSALNEMDALVFSSRVDNYP 320
Cdd:TIGR04015 241 KPKIAVVAHDLRYDGKTNQRLVRDMMALGDKIELHTFGKFSPFTGTNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYP 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334  321 LILCEALSIGVPVIATHSDAAREVLEKSGGKTFTEQEVLPLVQLPKAQIAEIVFGTDLESFRNRSRKAYSGQQMLEEYVS 400
Cdd:TIGR04015 321 LILCEALSIGVPVIATHSEAAQEVLAKSGGKTVSESEVLQLAQRSKPEIAQAVFGTTLEAFRARSREAYSGQQMLEEYVS 400


                  ....*
gi 695732334  401 FYQNL 405
Cdd:TIGR04015 401 FYQNL 405
GT4_WcaC-like cd03825
putative colanic acid biosynthesis glycosyl transferase WcaC and similar proteins; This family ...
 1-405 1.48e-100

putative colanic acid biosynthesis glycosyl transferase WcaC and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. Escherichia coli WcaC has been predicted to function in colanic acid biosynthesis. WcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.


Pssm-ID: 340851 [Multi-domain]  Cd Length: 364  Bit Score: 303.10  E-value: 1.48e-100
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334   1 MNILQFNVRLAEGGAAGVALDLHQRALQKGLQSRFIYGYGKggkksvshdnfpqvhkhtprltsianialfrlfNRDLFG 80
Cdd:cd03825    1 MKVLHINTVDLSGGAARAAYRLHQALLAYGIDSTMLVGRKK---------------------------------NLISKP 47

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334  81 NLNNlyrtvtrttgPVVLHFHVLHSYWLNLEEVVAFCQKVqahkpdtRFVWTLHDHWSVTGRCAFTDGCEGWKDNCQKCP 160
Cdd:cd03825   48 EFIE----------ADIIHLHWIHGGYLSLKALFKLLRRK-------PVVWTLHDMWPFTGGCHYPMECEGWKTGCGNCP 110

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334 161 TLSNYPPVKVDRAHQLVAGKRQLFRDmlsLGCTFISPSQHVADAFNS--LYGAGRCQIINNGIDVA--TEAILAELTPVA 236
Cdd:cd03825  111 NLNSYPPAKKDLSRQLFRRKREALAK---KRLTIVAPSRWLADMVRRspLLKGLPVVVIPNGIDTEifAPVDKAKARKRL 187

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334 237 ETaGKPKIAIVAHDLRYD--GKTNQQLVRDMMALG--DKIELHTFGKFSPF---EGANVVNHGFETDKRKLMSALNEMDA 309
Cdd:cd03825  188 GI-PQDKKVILFGAESVTkpRKGFDELIEALKLLAtkDDLLLVVFGKNDPQiviLPFDIISLGYIDDDEQLVDIYSAADL 266

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334 310 LVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVL-EKSGGKTFTEQEVlplVQLPKAqIAEIVFGTD-LESFRNRSRK 387
Cdd:cd03825  267 FVHPSLADNLPNTLLEAMACGTPVVAFDTGGSPEIVqHGVTGYLVPPGDV---QALAEA-IEWLLANPKeRESLGERARA 342

                        410       420
                 ....*....|....*....|..
gi 695732334 388 A----YSGQQMLEEYVSFYQNL 405
Cdd:cd03825  343 LaenhFDQRVQAQRYLELYKDL 364
RfaB COG0438
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ...
 303-405 4.22e-08

Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440207 [Multi-domain]  Cd Length: 123  Bit Score: 51.53  E-value: 4.22e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334 303 ALNEMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLEKSG-GKTFTEQEVLPLVqlpkAQIAEIVFGTDL--- 378
Cdd:COG0438   17 LLAAADVFVLPSRSEGFGLVLLEAMAAGLPVIATDVGGLPEVIEDGEtGLLVPPGDPEALA----EAILRLLEDPELrrr 92

                         90       100
                 ....*....|....*....|....*....
gi 695732334 379 --ESFRNRSRKAYSGQQMLEEYVSFYQNL 405
Cdd:COG0438   93 lgEAARERAEERFSWEAIAERLLALYEEL 121
Glyco_trans_1_4 pfam13692
Glycosyl transferases group 1;
287-346 3.34e-07

Glycosyl transferases group 1;


Pssm-ID: 463957 [Multi-domain]  Cd Length: 138  Bit Score: 49.05  E-value: 3.34e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334  287 NVVNHGFETDKRKLMSAlneMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLE 346
Cdd:pfam13692  57 RVIFTGFVEDLAELLAA---ADVFVLPSLYEGFGLKLLEAMAAGLPVVATDVGGIPELVD 113
PRK15179 PRK15179
Vi polysaccharide biosynthesis protein TviE; Provisional
 304-403 1.29e-05

Vi polysaccharide biosynthesis protein TviE; Provisional


Pssm-ID: 185101 [Multi-domain]  Cd Length: 694  Bit Score: 47.34  E-value: 1.29e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334 304 LNEMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAARE-VLEKSGGKTFTEQEVL-PLVQLPKAQIAEIVFGTD--LE 379
Cdd:PRK15179 589 LTQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEaVQEGVTGLTLPADTVTaPDVAEALARIHDMCAADPgiAR 668

                         90       100
                 ....*....|....*....|....
gi 695732334 380 SFRNRSRKAYSGQQMLEEYVSFYQ 403
Cdd:PRK15179 669 KAADWASARFSLNQMIASTVRCYQ 692
 
Name Accession Description Interval E-value
WcaC TIGR04015
colanic acid biosynthesis glycosyl transferase WcaC; This gene is one of the glycosyl ...
 1-405 0e+00

colanic acid biosynthesis glycosyl transferase WcaC; This gene is one of the glycosyl transferases involved in the biosynthesis of colanic acid, an exopolysaccharide expressed in Enterobacteraceae species.


Pssm-ID: 274919  Cd Length: 405  Bit Score: 858.51  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334    1 MNILQFNVRLAEGGAAGVALDLHQRALQKGLQSRFIYGYGKGGKKSVSHDNFPQVHKHTPRLTSIANIALFRLFNRDLFG 80
Cdd:TIGR04015   1 MNILQFNVRLAEGGAAGVALDLHQRALQKGLTSHFVYGYGKGGKKSVSHDNYPQVIKHTPRLTSIANIALFRFFNRDLFG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334   81 NLNNLYRTVTRTTGPVVLHFHVLHSYWLNLEEVVAFCQKVQAHKPDTRFVWTLHDHWSVTGRCAFTDGCEGWKDNCQKCP 160
Cdd:TIGR04015  81 NLDNLYRTITRTPGPVVLHFHVLHSYWLNLAKVVAFCEKVKAHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCP 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334  161 TLSNYPPVKVDRAHQLVAGKRQLFRDMLSLGCTFISPSQHVADAFNSLYGAGRCQIINNGIDVATEAILAELTPVAETAG 240
Cdd:TIGR04015 161 TLDNYPPVKIDRAHQLVDGKRQRFRDMLALGCQFISPSQHVADAFNSLYGAGRCRIINNGIDVATEAILAELPPVPEGQG 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334  241 KPKIAIVAHDLRYDGKTNQQLVRDMMALGDKIELHTFGKFSPFEGANVVNHGFETDKRKLMSALNEMDALVFSSRVDNYP 320
Cdd:TIGR04015 241 KPKIAVVAHDLRYDGKTNQRLVRDMMALGDKIELHTFGKFSPFTGTNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYP 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334  321 LILCEALSIGVPVIATHSDAAREVLEKSGGKTFTEQEVLPLVQLPKAQIAEIVFGTDLESFRNRSRKAYSGQQMLEEYVS 400
Cdd:TIGR04015 321 LILCEALSIGVPVIATHSEAAQEVLAKSGGKTVSESEVLQLAQRSKPEIAQAVFGTTLEAFRARSREAYSGQQMLEEYVS 400


                  ....*
gi 695732334  401 FYQNL 405
Cdd:TIGR04015 401 FYQNL 405
GT4_WcaC-like cd03825
putative colanic acid biosynthesis glycosyl transferase WcaC and similar proteins; This family ...
 1-405 1.48e-100

putative colanic acid biosynthesis glycosyl transferase WcaC and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. Escherichia coli WcaC has been predicted to function in colanic acid biosynthesis. WcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.


Pssm-ID: 340851 [Multi-domain]  Cd Length: 364  Bit Score: 303.10  E-value: 1.48e-100
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334   1 MNILQFNVRLAEGGAAGVALDLHQRALQKGLQSRFIYGYGKggkksvshdnfpqvhkhtprltsianialfrlfNRDLFG 80
Cdd:cd03825    1 MKVLHINTVDLSGGAARAAYRLHQALLAYGIDSTMLVGRKK---------------------------------NLISKP 47

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334  81 NLNNlyrtvtrttgPVVLHFHVLHSYWLNLEEVVAFCQKVqahkpdtRFVWTLHDHWSVTGRCAFTDGCEGWKDNCQKCP 160
Cdd:cd03825   48 EFIE----------ADIIHLHWIHGGYLSLKALFKLLRRK-------PVVWTLHDMWPFTGGCHYPMECEGWKTGCGNCP 110

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334 161 TLSNYPPVKVDRAHQLVAGKRQLFRDmlsLGCTFISPSQHVADAFNS--LYGAGRCQIINNGIDVA--TEAILAELTPVA 236
Cdd:cd03825  111 NLNSYPPAKKDLSRQLFRRKREALAK---KRLTIVAPSRWLADMVRRspLLKGLPVVVIPNGIDTEifAPVDKAKARKRL 187

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334 237 ETaGKPKIAIVAHDLRYD--GKTNQQLVRDMMALG--DKIELHTFGKFSPF---EGANVVNHGFETDKRKLMSALNEMDA 309
Cdd:cd03825  188 GI-PQDKKVILFGAESVTkpRKGFDELIEALKLLAtkDDLLLVVFGKNDPQiviLPFDIISLGYIDDDEQLVDIYSAADL 266

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334 310 LVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVL-EKSGGKTFTEQEVlplVQLPKAqIAEIVFGTD-LESFRNRSRK 387
Cdd:cd03825  267 FVHPSLADNLPNTLLEAMACGTPVVAFDTGGSPEIVqHGVTGYLVPPGDV---QALAEA-IEWLLANPKeRESLGERARA 342

                        410       420
                 ....*....|....*....|..
gi 695732334 388 A----YSGQQMLEEYVSFYQNL 405
Cdd:cd03825  343 LaenhFDQRVQAQRYLELYKDL 364
GT4_PimA-like cd03801
phosphatidyl-myo-inositol mannosyltransferase; This family is most closely related to the GT4 ...
 13-403 2.57e-12

phosphatidyl-myo-inositol mannosyltransferase; This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.


Pssm-ID: 340831 [Multi-domain]  Cd Length: 366  Bit Score: 67.56  E-value: 2.57e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334  13 GGAAGVALDLHQRALQKGLQSRFIYGYGKggkksvshDNFPQVHKHTPRLTSIANIALFRLFNRDLfgnlnNLYRTVTRT 92
Cdd:cd03801   14 GGAERHVRELARALAARGHDVTVLTPADP--------GEPPEELEDGVIVPLLPSLAALLRARRLL-----RELRPLLRL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334  93 TGPVVLHFHVLHSYWLNLeevvafcqkVQAHKPDTRFVWTLHDHWSvtgrcaftdgcegwkdncqkcptlsnyppvkvDR 172
Cdd:cd03801   81 RKFDVVHAHGLLAALLAA---------LLALLLGAPLVVTLHGAEP--------------------------------GR 119

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334 173 AHQLVAGKRQLFR---DMLSLGCTFISPSQHVADAFNSLYGAGRCQI--INNGIDVAtEAILAELTPVAETAGKPKIAIV 247
Cdd:cd03801  120 LLLLLAAERRLLAraeALLRRADAVIAVSEALRDELRALGGIPPEKIvvIPNGVDLE-RFSPPLRRKLGIPPDRPVLLFV 198

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334 248 AhdlRYDGKTNQQL----VRDMMALGDKIELHTFG----------KFSPFEGANVVNHGFETDKRkLMSALNEMDALVFS 313
Cdd:cd03801  199 G---RLSPRKGVDLlleaLAKLLRRGPDVRLVIVGgdgplraeleELELGLGDRVRFLGFVPDEE-LPALYAAADVFVLP 274

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334 314 SRVDNYPLILCEALSIGVPVIATHSDAAREVLE-KSGGKTFTEQEVLPLVqlpkAQIAEIVFGTDL-----ESFRNRSRK 387
Cdd:cd03801  275 SRYEGFGLVVLEAMAAGLPVVATDVGGLPEVVEdGEGGLVVPPDDVEALA----DALLRLLADPELrarlgRAARERVAE 350

                        410
                 ....*....|....*.
gi 695732334 388 AYSGQQMLEEYVSFYQ 403
Cdd:cd03801  351 RFSWERVAERLLDLYR 366
GT4_GT28_WabH-like cd03811
family 4 and family 28 glycosyltransferases similar to Klebsiella WabH; This family is most ...
 180-398 1.04e-09

family 4 and family 28 glycosyltransferases similar to Klebsiella WabH; This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.


Pssm-ID: 340839 [Multi-domain]  Cd Length: 351  Bit Score: 59.68  E-value: 1.04e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334 180 KRQLFRDMLSLGCTFISPSQHVADAFNSLYGAG--RCQIINNGIDVATEAILAELTPVAETAGKPKIAIVAhdlRYDGKT 257
Cdd:cd03811  125 KLLLKLKLYKKADKIVCVSKGIKEDLIRLGPSPpeKIEVIYNPIDIDRIRALAKEPILNEPEDGPVILAVG---RLDPQK 201

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334 258 NQQLVRDMMAL----GDKIELHTFGKFSPFE-----------GANVVNHGFETDKRKLMSAlneMDALVFSSRVDNYPLI 322
Cdd:cd03811  202 GHDLLIEAFAKlrkkYPDVKLVILGDGPLREeleklakelglAERVIFLGFQSNPYPYLKK---ADLFVLSSRYEGFPNV 278

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 695732334 323 LCEALSIGVPVIATHSDAAREVLEKSGGktfteQEVLPLVQLPKAQIAEIVFGTDLESFRNRSRKAYSGQQMLEEY 398
Cdd:cd03811  279 LLEAMALGTPVVSTDCPGPREILDDGEN-----GLLVPDGDAAALAGILAALLQKKLDAALRERLAKAQEAVFREY 349
RfaB COG0438
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ...
 303-405 4.22e-08

Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440207 [Multi-domain]  Cd Length: 123  Bit Score: 51.53  E-value: 4.22e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334 303 ALNEMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLEKSG-GKTFTEQEVLPLVqlpkAQIAEIVFGTDL--- 378
Cdd:COG0438   17 LLAAADVFVLPSRSEGFGLVLLEAMAAGLPVIATDVGGLPEVIEDGEtGLLVPPGDPEALA----EAILRLLEDPELrrr 92

                         90       100
                 ....*....|....*....|....*....
gi 695732334 379 --ESFRNRSRKAYSGQQMLEEYVSFYQNL 405
Cdd:COG0438   93 lgEAARERAEERFSWEAIAERLLALYEEL 121
Glyco_trans_1_4 pfam13692
Glycosyl transferases group 1;
287-346 3.34e-07

Glycosyl transferases group 1;


Pssm-ID: 463957 [Multi-domain]  Cd Length: 138  Bit Score: 49.05  E-value: 3.34e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334  287 NVVNHGFETDKRKLMSAlneMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLE 346
Cdd:pfam13692  57 RVIFTGFVEDLAELLAA---ADVFVLPSLYEGFGLKLLEAMAAGLPVVATDVGGIPELVD 113
GT4_UGDG-like cd03817
UDP-Glc:1,2-diacylglycerol 3-a-glucosyltransferase and similar proteins; This family is most ...
 177-405 5.52e-07

UDP-Glc:1,2-diacylglycerol 3-a-glucosyltransferase and similar proteins; This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (EC 2.4.1.337, UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.


Pssm-ID: 340844 [Multi-domain]  Cd Length: 372  Bit Score: 51.13  E-value: 5.52e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334 177 VAGKRQLFRDMLSLGCTFISPSQHVADAFNSlYGAGRC-QIINNGID------VATEAILAELTPvaeTAGKPKIAIVAh 249
Cdd:cd03817  134 KAVVRKLVRRFYNHTDAVIAPSEKIKDTLRE-YGVKGPiEVIPNGIDldkfekPLNTEERRKLGL---PPDEPILLYVG- 208

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334 250 dlRYDGKTNQQLVRDMMAL------------GDKIELHTFGKFSPFEGA--NVVNHGFeTDKRKLMSALNEMDALVFSSR 315
Cdd:cd03817  209 --RLAKEKNIDFLLRAFAElkkepniklvivGDGPEREELKELARELGLadKVIFTGF-VPREELPEYYKAADLFVFAST 285

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334 316 VDNYPLILCEALSIGVPVIATHSDAARE-VLEKSGGKTFTEQEVLPLVQLPKAQIAEIVFGTDLESFRNRSRKAYSGQQm 394
Cdd:cd03817  286 TETQGLVYLEAMAAGLPVVAAKDPAASElVEDGENGFLFEPNDETLAEKLLHLRENLELLRKLSKNAEISAREFAFAKS- 364

                        250
                 ....*....|.
gi 695732334 395 leeYVSFYQNL 405
Cdd:cd03817  365 ---VEKLYEEV 372
GT4_WbnK-like cd03807
Shigella dysenteriae WbnK and similar proteins; This family is most closely related to the GT4 ...
 304-402 1.07e-06

Shigella dysenteriae WbnK and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.


Pssm-ID: 340836 [Multi-domain]  Cd Length: 362  Bit Score: 50.39  E-value: 1.07e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334 304 LNEMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLEKSGGKTFTEQEVLPLVQLPKAqIAEIVFGTDLESFRN 383
Cdd:cd03807  262 LPAMDIFVLSSRTEGFPNALLEAMACGLPVVATDVGGAAELVDDGTGFLVPAGDPQALADAIRA-LLEDPEKRARLGRAA 340

                         90       100
                 ....*....|....*....|.
gi 695732334 384 RSRKA--YSGQQMLEEYVSFY 402
Cdd:cd03807  341 RERIAneFSIDAMVRRYETLY 361
GT4_WlbH-like cd03798
Bordetella parapertussis WlbH and similar proteins; This family is most closely related to the ...
 216-346 1.16e-06

Bordetella parapertussis WlbH and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. Staphylococcus aureus CapJ may be involved in capsule polysaccharide biosynthesis. WlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.


Pssm-ID: 340828 [Multi-domain]  Cd Length: 376  Bit Score: 50.07  E-value: 1.16e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334 216 IINNGIDVATEAILAELTPVAETAgkPKIAIVAHDLRYDGktnQQLVRDMMALGDK----IELHTFGKFSPFE------- 284
Cdd:cd03798  177 VIPNGVDPARFQPEDRGLGLPLDA--FVILFVGRLIPRKG---IDLLLEAFARLAKarpdVVLLIVGDGPLREalralae 251

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 695732334 285 ----GANVVNHGF--ETDKRKLMSAlneMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLE 346
Cdd:cd03798  252 dlglGDRVTFTGRlpHEQVPAYYRA---CDVFVLPSRHEGFGLVLLEAMACGLPVVATDVGGIPEVVG 316
PRK15179 PRK15179
Vi polysaccharide biosynthesis protein TviE; Provisional
 304-403 1.29e-05

Vi polysaccharide biosynthesis protein TviE; Provisional


Pssm-ID: 185101 [Multi-domain]  Cd Length: 694  Bit Score: 47.34  E-value: 1.29e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334 304 LNEMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAARE-VLEKSGGKTFTEQEVL-PLVQLPKAQIAEIVFGTD--LE 379
Cdd:PRK15179 589 LTQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEaVQEGVTGLTLPADTVTaPDVAEALARIHDMCAADPgiAR 668

                         90       100
                 ....*....|....*....|....
gi 695732334 380 SFRNRSRKAYSGQQMLEEYVSFYQ 403
Cdd:PRK15179 669 KAADWASARFSLNQMIASTVRCYQ 692
GT4_CapM-like cd03808
capsular polysaccharide biosynthesis glycosyltransferase CapM and similar proteins; This ...
 287-344 1.12e-04

capsular polysaccharide biosynthesis glycosyltransferase CapM and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. CapM in Staphylococcus aureus is required for the synthesis of type 1 capsular polysaccharides.


Pssm-ID: 340837 [Multi-domain]  Cd Length: 358  Bit Score: 43.74  E-value: 1.12e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 695732334 287 NVVNHGFETDKRKLmsaLNEMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREV 344
Cdd:cd03808  247 RIEFLGFRSDVPEL---LAESDVFVLPSYREGLPRSLLEAMAAGRPVITTDVPGCREL 301
GT4_WavL-like cd03819
Vibrio cholerae WavL and similar sequences; This family is most closely related to the GT4 ...
 209-347 3.23e-04

Vibrio cholerae WavL and similar sequences; This family is most closely related to the GT4 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.


Pssm-ID: 340846 [Multi-domain]  Cd Length: 345  Bit Score: 42.34  E-value: 3.23e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334 209 YGAGRCQIINNGID---VATEAILAELTPVAETAGKPKIAIVAhdlRYDGKTNQQLVRDMMAL------------GDKIE 273
Cdd:cd03819  147 VDPERIRVIPNGVDtdrFPPEAEAEERAQLGLPEGKPVVGYVG---RLSPEKGWLLLVDAAAElkdepdfrllvaGDGPE 223

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 695732334 274 LHTFGKFSPFEGAN--VVNHGFETDKRKLMSAlneMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLEK 347
Cdd:cd03819  224 RDEIRRLVERLGLRdrVTFTGFREDVPAALAA---SDVVVLPSLHEEFGRVALEAMACGTPVVATDVGGAREIVVH 296
Glycos_transf_1 pfam00534
Glycosyl transferases group 1; Mutations in this domain of Swiss:P37287 lead to disease ...
 285-346 3.27e-04

Glycosyl transferases group 1; Mutations in this domain of Swiss:P37287 lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family.


Pssm-ID: 425737 [Multi-domain]  Cd Length: 158  Bit Score: 40.72  E-value: 3.27e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 695732334  285 GANVVNHGFeTDKRKLMSALNEMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLE 346
Cdd:pfam00534  58 GDNVIFLGF-VSDEDLPELLKIADVFVLPSRYEGFGIVLLEAMACGLPVIASDVGGPPEVVK 118
Glycosyltransferase_GTB-type cd01635
glycosyltransferase family 1 and related proteins with GTB topology; Glycosyltransferases ...
 285-350 3.55e-04

glycosyltransferase family 1 and related proteins with GTB topology; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.


Pssm-ID: 340816 [Multi-domain]  Cd Length: 235  Bit Score: 41.62  E-value: 3.55e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 695732334 285 GANVVNHGFETDKRKLMSALNEMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLEKSGG 350
Cdd:cd01635  166 LERVVIIGGLVDDEVLELLLAAADVFVLPSRSEGFGLVLLEAMAAGKPVIATDVGGIPEFVVDGEN 231
GT4-like cd03814
glycosyltransferase family 4 proteins; This family is most closely related to the GT4 family ...
 287-349 9.51e-04

glycosyltransferase family 4 proteins; This family is most closely related to the GT4 family of glycosyltransferases and includes a sequence annotated as alpha-D-mannose-alpha(1-6)phosphatidyl myo-inositol monomannoside transferase from Bacillus halodurans. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes.


Pssm-ID: 340842 [Multi-domain]  Cd Length: 365  Bit Score: 41.13  E-value: 9.51e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 695732334 287 NVVNHGFETDkRKLMSALNEMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLEKSG 349
Cdd:cd03814  249 DVIFTGFLTG-EELARAYASADVFVFPSRTETFGLVVLEAMASGLPVVAADAGGPRDIVRPGG 310
GT4_AmsD-like cd03820
amylovoran biosynthesis glycosyltransferase AmsD and similar proteins; This family is most ...
 308-335 1.02e-03

amylovoran biosynthesis glycosyltransferase AmsD and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.


Pssm-ID: 340847 [Multi-domain]  Cd Length: 351  Bit Score: 41.07  E-value: 1.02e-03
                         10        20
                 ....*....|....*....|....*...
gi 695732334 308 DALVFSSRVDNYPLILCEALSIGVPVIA 335
Cdd:cd03820  257 SIFVLSSRYEGFPMVLLEAMAYGLPIIS 284
GT4-like cd03813
glycosyltransferase family 4 proteins; This family is most closely related to the GT4 family ...
 303-402 1.51e-03

glycosyltransferase family 4 proteins; This family is most closely related to the GT4 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes.


Pssm-ID: 340841 [Multi-domain]  Cd Length: 474  Bit Score: 40.40  E-value: 1.51e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334 303 ALNEMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLEKSGGKTFTEQEVLPLV---QLPKAQIAEIVFGTDLE 379
Cdd:cd03813  367 YYPKLGLLVLTSISEGQPLVILEAMASGVPVVATDVGSCRELIYGADDALGQAGLVVPPAdpeALAEALIKLLRDPELRQ 446

                         90       100
                 ....*....|....*....|....*..
gi 695732334 380 SF----RNRSRKAYSGQQMLEEYVSFY 402
Cdd:cd03813  447 AFgeagRKRVEKYYTLEGMIDSYRKLY 473
GT4_WbdM_like cd04951
LPS/UnPP-GlcNAc-Gal a-1,4-glucosyltransferase WbdM and similar proteins; This family is most ...
 287-348 2.09e-03

LPS/UnPP-GlcNAc-Gal a-1,4-glucosyltransferase WbdM and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria.


Pssm-ID: 340857 [Multi-domain]  Cd Length: 360  Bit Score: 40.12  E-value: 2.09e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 695732334 287 NVVNHGFETDKRKLMSAlneMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLEKS 348
Cdd:cd04951  246 RVILLGQISNISEYYNA---ADLFVLSSEWEGFGLVVAEAMACERPVVATDAGGVAEVVGDH 304
GT4_AviGT4-like cd03802
UDP-Glc:tetrahydrobiopterin alpha-glucosyltransferase and similar proteins; This family is ...
 97-405 6.15e-03

UDP-Glc:tetrahydrobiopterin alpha-glucosyltransferase and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.


Pssm-ID: 340832 [Multi-domain]  Cd Length: 333  Bit Score: 38.42  E-value: 6.15e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334  97 VLHFHVLhsYWLNLeevvafcqkvQAHKPDTRFVWTLHDHWSVTgrcaftdgcegwkdncqKCPTLSNYPPVkvdrahql 176
Cdd:cd03802   89 VIHNHSY--DWLPP----------FAPLIGTPFVTTLHGPSIPP-----------------SLAIYAAEPPV-------- 131

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334 177 vagkrqlfrdmlslGCTFISPSQhvADAFNslyGAGRCQIINNGIDVAT-------EAILAELTPVAETAGkPKIAI-VA 248
Cdd:cd03802  132 --------------NYVSISDAQ--RAATP---PIDYLTVVHNGLDPADyrfqpdpEDYLAFLGRIAPEKG-LEDAIrVA 191

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334 249 HdlrydgKTNQQLVrdmMALGDKIELHTFGKFSPFEGANVVNHGFETDKRKlMSALNEMDALVFSSRVDN-YPLILCEAL 327
Cdd:cd03802  192 R------RAGLPLK---IAGKVRDEDYFYYLQEPLPGPRIEFIGEVGHDEK-QELLGGARALLFPINWDEpFGLVMIEAM 261

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695732334 328 SIGVPVIATHSDAAREVLEksggktftEQEVLPLVQlPKAQIAEIVfgTDLESF-----RNRSRKAYSGQQMLEEYVSFY 402
Cdd:cd03802  262 ACGTPVIAYRRGGLPEVIQ--------HGETGFLVD-SVEEMAEAI--ANIDRIdraacRRYAEDRFSAARMADRYEALY 330


                 ...
gi 695732334 403 QNL 405
Cdd:cd03802  331 RKV 333
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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