|
Name |
Accession |
Description |
Interval |
E-value |
| ARO8 |
COG1167 |
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain ... |
2-471 |
1.13e-156 |
|
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain [Transcription, Amino acid transport and metabolism]; DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain is part of the Pathway/BioSystem: Lysine biosynthesis
Pssm-ID: 440781 [Multi-domain] Cd Length: 471 Bit Score: 453.13 E-value: 1.13e-156
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 2 SAPSPHYRRIAERLRLTLSSGALRVGDRMISARKLAEREHVSLPTALEALRCLEAEGLIVARPRSGYYIHQISHPPRAEP 81
Cdd:COG1167 8 DSSGPLYLQLADALREAILSGRLPPGDRLPSSRELAAQLGVSRSTVVRAYEELEAEGLIESRPGSGTFVAARLPAPAPAP 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 82 ARSTPGPVPVTMSAVARslfssaEARLIPLGAALPDPAWLPGDALQRALHSVGRRLDAHGQSYSLPPGRRDLRSKIAARA 161
Cdd:COG1167 88 RAAAAVAAPALRRLLEA------APGVIDLGSGAPDPDLFPLAALRRALRRALRRLPPALLGYGDPQGLPELREAIARYL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 162 AQWGARFGADDLIITAGATQALRLALRAVCQPGDVVAVEQPAYFGTLLLLEDLGLKALEIPTDpAEGLLLEPLADAIRCH 241
Cdd:COG1167 162 ARRGVPASPDQILITSGAQQALDLALRALLRPGDTVAVESPTYPGALAALRAAGLRLVPVPVD-EDGLDLDALEAALRRH 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 242 RPAAVLASPTVQNPLGASMPVARKQELVALLEEAGIPLIEDDVYGDLVGDGQRPPACKAFDQNGNVIYCSSLSKTLAPGW 321
Cdd:COG1167 241 RPRAVYVTPSHQNPTGATMSLERRRALLELARRHGVPIIEDDYDSELRYDGRPPPPLAALDAPGRVIYIGSFSKTLAPGL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 322 RIGWIAA-GRYYPQVLQARMAGDWAGAPLLEAATSEMLANGDYDRHLRRLKRRIAEGIAAVVVRVKASFPPGTRVNVPAA 400
Cdd:COG1167 321 RLGYLVApGRLIERLARLKRATDLGTSPLTQLALAEFLESGHYDRHLRRLRREYRARRDLLLAALARHLPDGLRVTGPPG 400
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 695737197 401 GFLLWVELPPQVNALEVHRRALARGIGVSPGPLFSPGAELTHFLRLNCANEPTPRLLTAVEQIGALCHELA 471
Cdd:COG1167 401 GLHLWLELPEGVDAEALAAAALARGILVAPGSAFSADGPPRNGLRLGFGAPSEEELEEALRRLAELLRELA 471
|
|
| AAT_like |
cd00609 |
Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent ... |
109-465 |
1.21e-65 |
|
Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein.
Pssm-ID: 99734 [Multi-domain] Cd Length: 350 Bit Score: 215.28 E-value: 1.21e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 109 IPLGAALPDPAWLPgdALQRALHSVGRRLDAHGqsYSLPPGRRDLRSKIAAR-AAQWGARFGADDLIITAGATQALRLAL 187
Cdd:cd00609 1 IDLSIGEPDFPPPP--EVLEALAAAALRAGLLG--YYPDPGLPELREAIAEWlGRRGGVDVPPEEIVVTNGAQEALSLLL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 188 RAVCQPGDVVAVEQPAYFGTLLLLEDLGLKALEIPTDPAEGLLLEP-LADAIRCHRPAAV-LASPtvQNPLGASMPVARK 265
Cdd:cd00609 77 RALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLeLLEAAKTPKTKLLyLNNP--NNPTGAVLSEEEL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 266 QELVALLEEAGIPLIEDDVYGDLVGDGQRPPACKAFDQNGNVIYCSSLSKTLA-PGWRIGWIAA--GRYYPQVLQARMAG 342
Cdd:cd00609 155 EELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGlPGLRIGYLIAppEELLERLKKLLPYT 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 343 DWAGAPLLEAATSEMLANGdyDRHLRRLKRRIAEGIAAVVVRVKASFPPgtRVNVPAAGFLLWVELPPQVNALEVHRRAL 422
Cdd:cd00609 235 TSGPSTLSQAAAAAALDDG--EEHLEELRERYRRRRDALLEALKELGPL--VVVKPSGGFFLWLDLPEGDDEEFLERLLL 310
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 695737197 423 ARGIGVSPGPLFspGAELTHFLRLNCANePTPRLLTAVEQIGA 465
Cdd:cd00609 311 EAGVVVRPGSAF--GEGGEGFVRLSFAT-PEEELEEALERLAE 350
|
|
| AspB |
COG0436 |
Aspartate/methionine/tyrosine aminotransferase [Amino acid transport and metabolism]; ... |
93-470 |
1.16e-41 |
|
Aspartate/methionine/tyrosine aminotransferase [Amino acid transport and metabolism]; Aspartate/methionine/tyrosine aminotransferase is part of the Pathway/BioSystem: Isoleucine, leucine, valine biosynthesis
Pssm-ID: 440205 [Multi-domain] Cd Length: 387 Bit Score: 152.59 E-value: 1.16e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 93 MSAVARSLfSSAEARLIPLGAALPD---PAWLPgDALQRALHSvgrrlDAHGqsYSLPPGRRDLRSKIAARAAQW-GARF 168
Cdd:COG0436 18 VSALAAEL-KAAGEDVIDLGIGEPDfptPDHIR-EAAIEALDD-----GVTG--YTPSAGIPELREAIAAYYKRRyGVDL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 169 GADDLIITAGATQALRLALRAVCQPGDVVAVEQPAYFGTLLLLEDLGLKALEIPTDPAEGLLLEP--LADAIRcHRPAA- 245
Cdd:COG0436 89 DPDEILVTNGAKEALALALLALLNPGDEVLVPDPGYPSYRAAVRLAGGKPVPVPLDEENGFLPDPeaLEAAIT-PRTKAi 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 246 VLASPtvQNPLGASMPVARKQELVALLEEAGIPLIEDDVYGDLVGDGQRPP-ACKAFDQNGNVIYCSSLSKTLA-PGWRI 323
Cdd:COG0436 168 VLNSP--NNPTGAVYSREELEALAELAREHDLLVISDEIYEELVYDGAEHVsILSLPGLKDRTIVINSFSKSYAmTGWRI 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 324 GWIAAgryyPQVLQARMA------GDWAGAPLLEAATsEMLANGD--YDRHLRRLKRR---IAEGIAAVvvrvkasfppG 392
Cdd:COG0436 246 GYAVG----PPELIAALLklqsnlTSCAPTPAQYAAA-AALEGPQdyVEEMRAEYRRRrdlLVEGLNEI----------G 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 393 TRVNVPAAGFLLWVELPP-QVNALEVHRRALAR-GIGVSPGPLFSPGAEltHFLRLNCANePTPRLLTAVEQIGALCHEL 470
Cdd:COG0436 311 LSVVKPEGAFYLFADVPElGLDSEEFAERLLEEaGVAVVPGSAFGPAGE--GYVRISYAT-SEERLEEALERLARFLERY 387
|
|
| GntC_guanitoxin |
NF041364 |
guanitoxin biosynthesis PLP-dependent (S)-gamma-hydroxy-L-arginine cyclodehydratase GntC; |
149-466 |
2.79e-25 |
|
guanitoxin biosynthesis PLP-dependent (S)-gamma-hydroxy-L-arginine cyclodehydratase GntC;
Pssm-ID: 469255 Cd Length: 354 Bit Score: 106.65 E-value: 2.79e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 149 GRRDLRSKIAAR-AAQWGARFGADDLIITAGATQALRLALRAVCQPGDVVAVEQPAYFGTLLLLEDLGLKALEIPTDPAE 227
Cdd:NF041364 38 GSLELREAIAALyKDGYGIEVSPDQVLVTTGASEALFLYFHALLEPGDEVVVPVPAFQSLYEVPELLGGRVRPLPLSPEN 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 228 ---GLLLEPLADAIRCHRPAAVLASPtvQNPLGASMPVARKQELVALLEEAGIPLIEDDVYGDLVGDGQRP--PAcKAFD 302
Cdd:NF041364 118 qgfRPDLEALRSLITPRTRAIVINSP--NNPTGAVMTEAELEAILEIASRHGLIVLADEHYRFLPYDDGKHvsPS-LYPG 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 303 QNGNVIYCSSLSKTLA-PGWRIGWIAAGRyypqvlqarmagDWAGA-------------PLLEAATSEMLANGDYDRH-- 366
Cdd:NF041364 195 LSERVIALGSFSKTYGmTGLRVGWLIGPK------------ELIGAilkfkdytthcapSISQYAALEALEQGPQERVkg 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 367 LRRLKRRIAEGIAAVVVRVkASFPPgtrvnVPAAGFLLWVELPPQVNALEVHRRAL-ARGIGVSPGPLFSPGAEltHFLR 445
Cdd:NF041364 263 WVRENVRRRDALVERLERL-IGWVC-----EPEGGFYAFPKLKDGLPSAAFAEELLeKAGVVVLPGSAFGRPGE--GYFR 334
|
330 340
....*....|....*....|.
gi 695737197 446 LNCANEPTpRLLTAVEQIGAL 466
Cdd:NF041364 335 IGFANSPT-RLKEALERLSRF 354
|
|
| PRK07550 |
PRK07550 |
aminotransferase; |
82-475 |
5.99e-23 |
|
aminotransferase;
Pssm-ID: 181026 [Multi-domain] Cd Length: 386 Bit Score: 100.42 E-value: 5.99e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 82 ARSTPGPVPVTMSAVARslFSSAEARLIPLGAALPDPAwlPGDALQRALHSVGRRLDAHGqsYSLPPGRRDLRSKIAAR- 160
Cdd:PRK07550 7 AALFPPPIPEVRAWLAG--YDGADGPLIDLSQAVPGYP--PPPELLRALAEAAADPAAHL--YGPVEGLPELREAYAAHy 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 161 AAQWGARFGADDLIITAGATQALRLALRAVCQPGDVVAVEQPAYFGTLLLLEDLGLKALEIPTDPAEGLLLEP--LADAI 238
Cdd:PRK07550 81 SRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPaaAEALI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 239 RCHRPAAVLASPTvqNPLGASMPVARKQELVALLEEAGIPLIEDDVYGDLVGDGQRPPACKAF-DQNGNVIYCSSLSKTL 317
Cdd:PRK07550 161 TPRTRAIALVTPN--NPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADpDWDDTLVHLYSFSKSY 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 318 A-PGWRIGWIAAGryyPQVL-QARMAGDWAG--APLL--EAATSEMLANGDYDRHLRRLKRRIAEGIAAVVVRvkasfPP 391
Cdd:PRK07550 239 AlTGHRVGAVVAS---PARIaEIEKFMDTVAicAPRIgqIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFAR-----LP 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 392 GTRVnVPAAGFLLWVELP-PQVNALEVHRRaLARGIGVS--PGPLFSPGAEltHFLRLNCANeptprllTAVEQIGALCH 468
Cdd:PRK07550 311 GWEL-LASGAYFAYVRHPfPDRPSREVARR-LAKEAGILclPGTMFGPGQE--GYLRLAFAN-------ADVAGIGELVE 379
|
....*..
gi 695737197 469 ELAAFTP 475
Cdd:PRK07550 380 RLRAFAP 386
|
|
| Aminotran_1_2 |
pfam00155 |
Aminotransferase class I and II; |
121-463 |
1.90e-21 |
|
Aminotransferase class I and II;
Pssm-ID: 395103 [Multi-domain] Cd Length: 351 Bit Score: 95.45 E-value: 1.90e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 121 LPGDALQRALHSVGRRLDAHG-QSYSLPPGRRDLRSKIAARA-AQWGARFGADDLIITAGATQALRLAL-RAVCQPGDVV 197
Cdd:pfam00155 11 YLGDTLPAVAKAEKDALAGGTrNLYGPTDGHPELREALAKFLgRSPVLKLDREAAVVFGSGAGANIEALiFLLANPGDAI 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 198 AVEQPAYFGTLLLLEDLGLKALEIPTDPAEG--LLLEPLADAIRchRPAAVLASPTVQNPLGASMPVARKQELVALLEEA 275
Cdd:pfam00155 91 LVPAPTYASYIRIARLAGGEVVRYPLYDSNDfhLDFDALEAALK--EKPKVVLHTSPHNPTGTVATLEELEKLLDLAKEH 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 276 GIPLIEDDVYGDLVGDGQRPPACKAFDQNG-NVIYCSSLSKTLA-PGWRIGWIAAG---RYYPQVLQARMAGDWAGAPLL 350
Cdd:pfam00155 169 NILLLVDEAYAGFVFGSPDAVATRALLAEGpNLLVVGSFSKAFGlAGWRVGYILGNaavISQLRKLARPFYSSTHLQAAA 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 351 EAATSEMLangDYDRHLRRLKRRIAEGIAAVVVRVKAsfpPGTRVNVPAAGFLLWVELPPqVNALEVHRRALAR-GIGVS 429
Cdd:pfam00155 249 AAALSDPL---LVASELEEMRQRIKERRDYLRDGLQA---AGLSVLPSQAGFFLLTGLDP-ETAKELAQVLLEEvGVYVT 321
|
330 340 350
....*....|....*....|....*....|....
gi 695737197 430 PGPLFspgaELTHFLRLNCANEPTPRLLTAVEQI 463
Cdd:pfam00155 322 PGSSP----GVPGWLRITVAGGTEEELEELLEAI 351
|
|
| tyr_nico_aTase |
TIGR01265 |
tyrosine/nicotianamine family aminotransferase; This subfamily of pyridoxal ... |
92-327 |
2.59e-18 |
|
tyrosine/nicotianamine family aminotransferase; This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Pssm-ID: 188123 Cd Length: 403 Bit Score: 86.63 E-value: 2.59e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 92 TMSAVARSLFSSA--EARLIPLGAALP--DPAWLPGDALQRALHSVGRRLDAHGqsYSLPPGRRDLRSKIAARAAQW-GA 166
Cdd:TIGR01265 15 PIRAIVDNLKVKPnpEKPVIPLSHGDPsvFGNLRTDPEAEEAVKDALRSGKFNG--YAPSVGALAAREAVAEYLSSDlPG 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 167 RFGADDLIITAGATQALRLALRAVCQPGDVVAVEQPAY--FGTLLLLEDLGLKALEIPTDPAEGLLLEPLADAIRCHRPA 244
Cdd:TIGR01265 93 KLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFplYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLESLADEKTVA 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 245 AVLASPTvqNPLGASMPVARKQELVALLEEAGIPLIEDDVYGDLVGDGQRPPACKAFDQNGNVIYCSSLSKT-LAPGWRI 323
Cdd:TIGR01265 173 IVVINPS--NPCGSVFSRDHLQKIAEVAEKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRwVVPGWRL 250
|
....
gi 695737197 324 GWIA 327
Cdd:TIGR01265 251 GWII 254
|
|
| tyr_amTase_E |
TIGR01264 |
tyrosine aminotransferase, eukaryotic; This model describes tyrosine aminotransferase as found ... |
103-326 |
2.60e-18 |
|
tyrosine aminotransferase, eukaryotic; This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs. [Energy metabolism, Amino acids and amines]
Pssm-ID: 273529 [Multi-domain] Cd Length: 401 Bit Score: 86.76 E-value: 2.60e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 103 SAEARLIPLgaALPDPA----WLPGDALQRALHSVgrrLDAHGQSYSLPP-GRRDLRSKIAARAAQWGARFGADDLIITA 177
Cdd:TIGR01264 28 NPEKPMIKL--SIGDPTvfgnLPTDPEVMQAMKDS---LDSGKYNGYAPTvGALSAREAIASYYHNPDGPIEADDVVLCS 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 178 GATQALRLALRAVCQPGDVVAVEQPAY--FGTLLLLEDLGLKALEIPTDPAEGLLLEPLADAIRCHRPAAVLASPTvqNP 255
Cdd:TIGR01264 103 GCSHAIEMCIAALANAGQNILVPRPGFplYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALIVNNPS--NP 180
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 695737197 256 LGASMPVARKQELVALLEEAGIPLIEDDVYGDLVGDGQRPPACKAFDQNGNVIYCSSLSKT-LAPGWRIGWI 326
Cdd:TIGR01264 181 CGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRwLVPGWRLGWI 252
|
|
| PRK05764 |
PRK05764 |
aspartate aminotransferase; Provisional |
153-328 |
9.19e-18 |
|
aspartate aminotransferase; Provisional
Pssm-ID: 235596 Cd Length: 393 Bit Score: 84.79 E-value: 9.19e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 153 LRSKIAAR-AAQWGARFGADDLIITAGATQALRLALRAVCQPGDVVAVEQPAYFGTLLLLEDLGLKALEIPTDPAEGLLL 231
Cdd:PRK05764 73 LREAIAAKlKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKL 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 232 EP--LADAIRCHRPAAVLASPTvqNPLGASMPVARKQELVALLEEAGIPLIEDDVYGDLVGDGQR--PPACKAFDQNGNV 307
Cdd:PRK05764 153 TVeqLEAAITPKTKALILNSPS--NPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEftSIASLSPELRDRT 230
|
170 180
....*....|....*....|..
gi 695737197 308 IYCSSLSKTLA-PGWRIGWIAA 328
Cdd:PRK05764 231 ITVNGFSKAYAmTGWRLGYAAG 252
|
|
| PRK15481 |
PRK15481 |
transcriptional regulatory protein PtsJ; Provisional |
11-449 |
1.83e-17 |
|
transcriptional regulatory protein PtsJ; Provisional
Pssm-ID: 185378 [Multi-domain] Cd Length: 431 Bit Score: 84.33 E-value: 1.83e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 11 IAERLRLTLSSGALRVGDRMISARKLAEREHVSLPTALEALRCLEAEGLIVARPRSGYYIHQISHPPRAEParSTPGPVp 90
Cdd:PRK15481 10 IFDSIRQLIQAGRLRPGDSLPPVRELASELGVNRNTVAAAYKRLVTAGLAQSQGRNGTVIRGSPSPVALEG--GDPGTP- 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 91 vtmsavarslfssaearLIPLGAALPDPAWLPGdaLQRALhsvGRRLDAHGQsYSLPPgrrdLRSKIAARAAQWgarFGA 170
Cdd:PRK15481 87 -----------------LHDLAGGNPDPQRLPD--LSRYF---ARLSRTPRL-YGDAP----VSPELHAWAARW---LRD 136
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 171 D-----DLIITAGATQALRLALRAVCQPGDVVAVEQPAYFGTLLLLEDLGLKALEIPTDpAEGLLLEPLADAIRcHRPAA 245
Cdd:PRK15481 137 DcpvafEIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVD-AEGMQPEKLERALA-QGARA 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 246 VLASPTVQNPLGASMPVARKQELVALLEE-AGIPLIEDDVYGDLVGDGQRPPACKAfDQNGNVIycSSLSKTLAPGWRIG 324
Cdd:PRK15481 215 VILTPRAHNPTGCSLSARRAAALRNLLARyPQVLVIIDDHFALLSSSPYHSVIPQT-TQRWALI--RSVSKALGPDLRLA 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 325 WIAAGRYYPQVLQARMA--GDWAgAPLLEAATSEMLANGDYDRHLRRLKRRIAEGIAAVVVRVKASfppGTRVNVPAAGF 402
Cdd:PRK15481 292 FVASDSATSARLRLRLNsgTQWV-SHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY---GIAIPSPGDGL 367
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 695737197 403 LLWVELPPQVNALEVhrrALAR-GIGVSPGPLFSPGAElTHFLRLNCA 449
Cdd:PRK15481 368 NLWLPLDTDSQATAL---TLAKsGWLVREGEAFGVSAP-SHGLRITLS 411
|
|
| PRK06108 |
PRK06108 |
pyridoxal phosphate-dependent aminotransferase; |
115-461 |
2.08e-17 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180404 Cd Length: 382 Bit Score: 83.84 E-value: 2.08e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 115 LPDPAWLpGDALQRALHSvgrrldahGQS-YSLPPGRRDLRSKIAAR-AAQWGARFGADDLIITAGATQALRLALRAVCQ 192
Cdd:PRK06108 36 LPTPDFI-RDAAAAALAD--------GETfYTHNLGIPELREALARYvSRLHGVATPPERIAVTSSGVQALMLAAQALVG 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 193 PGDVVAVEQPAYFGTLLLLEDLGLKALEIPTDPAEG---LLLEPLADAIRCHRPAAVLASPTvqNPLGASMPVARKQELV 269
Cdd:PRK06108 107 PGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGgwtLDLDRLLAAITPRTRALFINSPN--NPTGWTASRDDLRAIL 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 270 ALLEEAGIPLIEDDVYGDLV-GDGQRPPackAF----DQNGNVIYCSSLSKTLA-PGWRIGWIAAGRYYPQVLQARMAGD 343
Cdd:PRK06108 185 AHCRRHGLWIVADEVYERLYyAPGGRAP---SFldiaEPDDRIIFVNSFSKNWAmTGWRLGWLVAPPALGQVLEKLIEYN 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 344 WAGAP-LLEAATSEMLANGD-----YDRHLRRLKRRIAEGIAAVvvrvkasfpPGTRVNVPAAGFLLWVELPPQVNALEV 417
Cdd:PRK06108 262 TSCVAqFVQRAAVAALDEGEdfvaeLVARLRRSRDHLVDALRAL---------PGVEVAKPDGAMYAFFRIPGVTDSLAL 332
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 695737197 418 HRRALAR-GIGVSPGPLFSPGAELthFLRLNCANEPTpRLLTAVE 461
Cdd:PRK06108 333 AKRLVDEaGLGLAPGTAFGPGGEG--FLRWCFARDPA-RLDEAVE 374
|
|
| PRK06836 |
PRK06836 |
pyridoxal phosphate-dependent aminotransferase; |
122-328 |
2.70e-17 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180720 Cd Length: 394 Bit Score: 83.70 E-value: 2.70e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 122 PGDALQRALHSVGRRLDAHGQSYSLPPGRRDLRSKIAAR-AAQWGARFGADDLIITAGATQALRLALRAVCQPGDVVAVE 200
Cdd:PRK06836 47 PPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESlNRRFGTPLTADHIVMTCGAAGALNVALKAILNPGDEVIVF 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 201 QPaYFGT-LLLLEDLGLKALEIPTDPAEGLL-LEPLADAIRCHRPAAVLASPtvQNPLGASMPVARKQELVALLEEAG-- 276
Cdd:PRK06836 127 AP-YFVEyRFYVDNHGGKLVVVPTDTDTFQPdLDALEAAITPKTKAVIINSP--NNPTGVVYSEETLKALAALLEEKSke 203
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 695737197 277 ----IPLIEDDVYGDLVGDG-QRPPACKAFDqngNVIYCSSLSKTLA-PGWRIGWIAA 328
Cdd:PRK06836 204 ygrpIYLISDEPYREIVYDGaEVPYIFKYYD---NSIVVYSFSKSLSlPGERIGYIAV 258
|
|
| MalY |
COG1168 |
Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor ... |
124-463 |
6.45e-17 |
|
Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism, General function prediction only];
Pssm-ID: 440782 Cd Length: 387 Bit Score: 82.45 E-value: 6.45e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 124 DALQRALHsvgRRLDaHGQ-SYSLPPgrRDLRSKIAARAA-QWGARFGADDLIITAGATQALRLALRAVCQPGDVVAVEQ 201
Cdd:COG1168 45 PAVIEALK---ERVE-HGVfGYTAPP--DEYYEAIIDWLKrRHGWEIDPEWIVFTPGVVPGLALAIRAFTEPGDGVLIQT 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 202 PAYFGTLLLLEDLGLKALEIPTDPAEG---LLLEPLADAIRCHRPAAVLASPtvQNPLGAsmpVARKQELVALLE---EA 275
Cdd:COG1168 119 PVYPPFFKAIENNGRELVENPLILEDGryrIDFDDLEAKLDPGVKLLLLCNP--HNPTGR---VWTREELERLAElceRH 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 276 GIPLIEDDVYGDLVGDGQR----PPACKAFDQngNVIYCSSLSKT--LApGWRIGWI----AAGRyypQVLQARMAGDWA 345
Cdd:COG1168 194 DVLVISDEIHADLVLPGHKhtpfASLSEEAAD--RTITLTSPSKTfnLA-GLKASYAiipnPALR---ARFARALEGLGL 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 346 ------GAPLLEAATS-------EMLangDY-DRHLRRLKRRIAEGIaavvvrvkasfpPGTRVNVPAAGFLLWVELppq 411
Cdd:COG1168 268 pspnvlGLVATEAAYRegeewldELL---AYlRGNRDLLAEFLAEHL------------PGVKVTPPEATYLAWLDC--- 329
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 412 vNALEVHRRALAR------GIGVSPGPLFspGAELTHFLRLNCAnepTPR--LLTAVEQI 463
Cdd:COG1168 330 -RALGLDDEELAEfllekaGVALSDGATF--GEGGEGFVRLNFA---CPRavLEEALERL 383
|
|
| PRK07568 |
PRK07568 |
pyridoxal phosphate-dependent aminotransferase; |
144-409 |
4.33e-16 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 181036 Cd Length: 397 Bit Score: 79.90 E-value: 4.33e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 144 YSLPPGRRDLRSKIAARAAQWGARFGADDLIITAGATQALRLALRAVCQPGDVVAVEQPAYFGTLLLLEDLGLKALEIPT 223
Cdd:PRK07568 62 YSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTT 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 224 DPAEGLLLEPLADAIRCHRP---AAVLASPTvqNPLGAsmpVARKQELVALLE---EAGIPLIEDDVYGDLVGDGQRPPA 297
Cdd:PRK07568 142 KIEEGFHLPSKEEIEKLITPktkAILISNPG--NPTGV---VYTKEELEMLAEiakKHDLFLISDEVYREFVYDGLKYTS 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 298 CKAF-DQNGNVIYCSSLSKTL-APGWRIGWIAA--GRYYPQVL---QARMAgdwagAPLLE--AATSEMLANGDYDRHLR 368
Cdd:PRK07568 217 ALSLeGLEDRVIIIDSVSKRYsACGARIGCLISknKELIAAAMklcQARLS-----PPTLEqiGAAALLDTPESYFDEVR 291
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 695737197 369 R--LKRR--IAEGIAAVvvrvkasfpPGTRVNVPAAGFLLWVELP 409
Cdd:PRK07568 292 EeyKKRRdiLYEELNKI---------PGVVCEKPKGAFYIIAKLP 327
|
|
| HisC |
COG0079 |
Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase [Amino acid ... |
124-463 |
5.75e-16 |
|
Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase [Amino acid transport and metabolism]; Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis
Pssm-ID: 439849 [Multi-domain] Cd Length: 341 Bit Score: 79.02 E-value: 5.75e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 124 DALQRALHSVGRrldahgqsysLP-PGRRDLRSKIAARaaqWGArfGADDLIITAGATQALRLALRAVCQPGDVVAVEQP 202
Cdd:COG0079 33 EAIAAALDALNR----------YPdPDATALREALAEY---YGV--PPEQVLVGNGSDELIQLLARAFLGPGDEVLVPEP 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 203 AYFGTLLLLEDLGLKALEIPTDPAEGLLLEPLADAIRcHRPAAV-LASPTvqNPLGASMPvarKQELVALLEE--AGIPL 279
Cdd:COG0079 98 TFSEYPIAARAAGAEVVEVPLDEDFSLDLDALLAAIT-ERTDLVfLCNPN--NPTGTLLP---REELEALLEAlpADGLV 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 280 IEDDVYGDLVGDGQRppACKAFDQNGNVIYCSSLSKTLA-PGWRIGWIAAGryyPQVLQA--RMAGDWA-GAPLLEAATs 355
Cdd:COG0079 172 VVDEAYAEFVPEEDS--ALPLLARYPNLVVLRTFSKAYGlAGLRLGYAIAS---PELIAAlrRVRGPWNvNSLAQAAAL- 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 356 EMLANGDYD----RHLRRLKRRIAEGIAAVVVRVkasfppgtrvnVPAAGFLLWVELPPqvNALEVHRRALARGIGVSPG 431
Cdd:COG0079 246 AALEDRAYLeetrARLRAERERLAAALRALGLTV-----------YPSQANFVLVRVPE--DAAELFEALLERGILVRDF 312
|
330 340 350
....*....|....*....|....*....|...
gi 695737197 432 PLFspgaELTHFLRLNCANEP-TPRLLTAVEQI 463
Cdd:COG0079 313 SSF----GLPDYLRITVGTPEeNDRLLAALKEI 341
|
|
| PRK08363 |
PRK08363 |
alanine aminotransferase; Validated |
144-373 |
7.31e-16 |
|
alanine aminotransferase; Validated
Pssm-ID: 181402 Cd Length: 398 Bit Score: 79.08 E-value: 7.31e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 144 YSLPPGRRDLRSKIAARAAQW-GARFGADDLIITAGATQALRLALRAVCQPGDVVAVEQPAYFGTLLLLEDLGLKALEIP 222
Cdd:PRK08363 66 YGPSEGLPELREAIVKREKRKnGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYR 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 223 TDPAEGllLEPLADAIRC----HRPAAVLASPtvQNPLGASMPVARKQELVALLEEAGIPLIEDDVYGDLVGDGQ-RPPA 297
Cdd:PRK08363 146 TIEEEG--WQPDIDDIRKkiteKTKAIAVINP--NNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKhVSPG 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 298 CKAFDQngNVIYCSSLSKT-LAPGWRIGWIAAGRYYPQVLQARMAGD-------WAGAPLLEAATSEMLANGDY-DRHLR 368
Cdd:PRK08363 222 SLTKDV--PVIVMNGLSKVyFATGWRLGYIYFVDPEGKLAEVREAIDklarirlCPNTPAQFAAIAGLTGPMDYlEEYMK 299
|
....*
gi 695737197 369 RLKRR 373
Cdd:PRK08363 300 KLKER 304
|
|
| PRK09082 |
PRK09082 |
methionine aminotransferase; Validated |
92-328 |
4.95e-15 |
|
methionine aminotransferase; Validated
Pssm-ID: 181642 [Multi-domain] Cd Length: 386 Bit Score: 76.49 E-value: 4.95e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 92 TMSAVArslfssAEARLIPLGAALPDpawLPGDalQRALHSVGRRLDAHGQSYSLPPGRRDLRSKIAARAAQ-WGARFGA 170
Cdd:PRK09082 22 VMSALA------AEHGAINLSQGFPD---FDGP--PYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARlYGRQYDA 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 171 D-DLIITAGATQALRLALRAVCQPGDVVAVEQPAYFGTLLLLEDLGLKALEIP-TDPAEGLLLEPLADAIRCHRPAAVLA 248
Cdd:PRK09082 91 DsEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVAlQPPDFRVDWQRFAAAISPRTRLIILN 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 249 SPtvQNPLGASMPVARKQELVALLEEAGIPLIEDDVYGDLVGDGQRPPACKAFDQ-NGNVIYCSSLSKTL-APGWRIGWI 326
Cdd:PRK09082 171 TP--HNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPElRERAFVVSSFGKTYhVTGWKVGYC 248
|
..
gi 695737197 327 AA 328
Cdd:PRK09082 249 VA 250
|
|
| PRK07682 |
PRK07682 |
aminotransferase; |
143-340 |
1.05e-14 |
|
aminotransferase;
Pssm-ID: 181082 [Multi-domain] Cd Length: 378 Bit Score: 75.54 E-value: 1.05e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 143 SYSLPPGRRDLRSKIAARAAQwgaRFG-----ADDLIITAGATQALRLALRAVCQPGDVVAVEQPAYFGTLLLLEDLGLK 217
Cdd:PRK07682 52 SYTANAGLLELRQEIAKYLKK---RFAvsydpNDEIIVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGV 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 218 ALEIPTDPAEGLLLEP--LADAIRCHRPAAVLASPTvqNPLGASMPVARKQELVALLEEAGIPLIEDDVYGDLVGDGQRP 295
Cdd:PRK07682 129 PVPVATTLENEFKVQPaqIEAAITAKTKAILLCSPN--NPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYT 206
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 695737197 296 PACKAFDQNGNVIYCSSLSKTLA-PGWRIGWIAAgryyPQVLQARM 340
Cdd:PRK07682 207 SFASIKGMRERTILISGFSKGFAmTGWRLGFIAA----PVYFSEAM 248
|
|
| WHTH_GntR |
cd07377 |
Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional ... |
8-70 |
1.34e-14 |
|
Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; This CD represents the winged HTH DNA-binding domain of the GntR (named after the gluconate operon repressor in Bacillus subtilis) family of bacterial transcriptional regulators and their putative homologs found in eukaryota and archaea. The GntR family has over 6000 members distributed among almost all bacterial species, which is comprised of FadR, HutC, MocR, YtrA, AraR, PlmA, and other subfamilies for the regulation of the most varied biological process. The monomeric proteins of the GntR family are characterized by two function domains: a small highly conserved winged helix-turn-helix prokaryotic DNA binding domain in the N-terminus, and a very diverse regulatory ligand-binding domain in the C-terminus for effector-binding/oligomerization, which provides the basis for the subfamily classifications. Binding of the effector to GntR-like transcriptional regulators is presumed to result in a conformational change that regulates the DNA-binding affinity of the repressor. The GntR-like proteins bind as dimers, where each monomer recognizes a half-site of 2-fold symmetric DNA sequences.
Pssm-ID: 153418 [Multi-domain] Cd Length: 66 Bit Score: 68.24 E-value: 1.34e-14
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 695737197 8 YRRIAERLRLTLSSGALRVGDRMISARKLAEREHVSLPTALEALRCLEAEGLIVARPRSGYYI 70
Cdd:cd07377 3 YEQIADQLREAILSGELKPGDRLPSERELAEELGVSRTTVREALRELEAEGLVERRPGRGTFV 65
|
|
| PRK06207 |
PRK06207 |
pyridoxal phosphate-dependent aminotransferase; |
142-466 |
1.43e-14 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235742 Cd Length: 405 Bit Score: 75.19 E-value: 1.43e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 142 QSYSLPPGRRDLRSKIAARAAQW-GARF-GADDLIITAGATQALRLALRAVCQPGDVVAVEQPAYFGTLLLLEDLGLKAL 219
Cdd:PRK06207 72 QAYTEYRGDADIRELLAARLAAFtGAPVdAADELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMV 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 220 EI-----PTDPAEGLLLEPLADAIRCHRPAAVLASPtvQNPLGASMPVARKQELVALLEEAGIPLIEDDVYGDLVGDGQR 294
Cdd:PRK06207 152 PVqldylSADKRAGLDLDQLEEAFKAGVRVFLFSNP--NNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTS 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 295 PPACKAFDQNG-NVIYCSSLSKTLA-PGWRIGwIAAGryyPQVLQARMAGDWAGAPLLEAATSEMLANGDYDRHLRRLKR 372
Cdd:PRK06207 230 YTHLRALPIDPeNVITIMGPSKTESlSGYRLG-VAFG---SPAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPDGWMKD 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 373 RIA--EGIAAVVVRVKASFpPGTRVNVPAAGFLLWVELPPQVNALEVHRRALAR--GIGVSPGPLFSPgaELTHFLRLNC 448
Cdd:PRK06207 306 RIArhQAIRDDLLRVLRGV-EGVFVRAPQAGSYLFPRLPRLAVSLHDFVKILRLqaGVIVTPGTEFSP--HTADSIRLNF 382
|
330
....*....|....*...
gi 695737197 449 ANEPTpRLLTAVEQIGAL 466
Cdd:PRK06207 383 SQDHA-AAVAAAERIAQL 399
|
|
| PRK07309 |
PRK07309 |
pyridoxal phosphate-dependent aminotransferase; |
171-449 |
2.08e-14 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235985 Cd Length: 391 Bit Score: 74.76 E-value: 2.08e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 171 DDLIITAGATQALRLALRAVCQPGDVVAVEQPAYFGTLLLLEDLGLKALEIPTDpAEGLLLEP--LADAIRCHR---PAA 245
Cdd:PRK07309 92 NEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTT-ENDFVLTPemLEKAILEQGdklKAV 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 246 VLASPTvqNPLGASMPVARKQELVALLEEAGIPLIEDDVYGDL--VGDGQRPPACKAFDQngnVIYCSSLSKTLA-PGWR 322
Cdd:PRK07309 171 ILNYPA--NPTGVTYSREQIKALADVLKKYDIFVISDEVYSELtyTGEPHVSIAEYLPDQ---TILINGLSKSHAmTGWR 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 323 IGWIAAgryyPQVLQARMAGDW-----AGAPLLEAATSEMLANGDYDRHLRR---LKRR--IAEGIAAVvvrvkasfppG 392
Cdd:PRK07309 246 IGLIFA----PAEFTAQLIKSHqylvtAATTMAQFAAVEALTNGKDDALPMKkeyIKRRdyIIEKMTDL----------G 311
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 393 TRVNVPAAGFLLWVELP---PQVNALEVHRRALARGIGVSPGPLFSPGAEltHFLRLNCA 449
Cdd:PRK07309 312 FKIIKPDGAFYIFAKIPagyNQDSFKFLQDFARKKAVAFIPGAAFGPYGE--GYVRLSYA 369
|
|
| PRK07683 |
PRK07683 |
aminotransferase A; Validated |
137-331 |
1.07e-13 |
|
aminotransferase A; Validated
Pssm-ID: 236075 Cd Length: 387 Bit Score: 72.45 E-value: 1.07e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 137 LDAHGQSYSLPPGRRDLRSKIAARAAQ-WGARFGAD-DLIITAGATQALRLALRAVCQPGDVVAVEQPAYFGTLLLLEDL 214
Cdd:PRK07683 54 ITENYTSYTHNAGLLELRKAACNFVKDkYDLHYSPEsEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLC 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 215 GLKALEIPTDP------AEglLLEP-LADAIRChrpaAVLASPTvqNPLGASMPVARKQELVALLEEAGIPLIEDDVYGD 287
Cdd:PRK07683 134 GAKPVFIDTRStgfrltAE--ALENaITEKTRC----VVLPYPS--NPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSE 205
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 695737197 288 LVGDGQRPPACKAFDQNGNVIYCSSLSKTLA-PGWRIGWIAAGRY 331
Cdd:PRK07683 206 LVYEQPHTSIAHFPEMREKTIVINGLSKSHSmTGWRIGFLFAPSY 250
|
|
| PTZ00433 |
PTZ00433 |
tyrosine aminotransferase; Provisional |
147-467 |
1.37e-13 |
|
tyrosine aminotransferase; Provisional
Pssm-ID: 185613 Cd Length: 412 Bit Score: 72.51 E-value: 1.37e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 147 PP--GRRDLRSKIAAraaQWGARFG----------ADDLIITAGATQALRLALRAVCQPGDVVAVEQPA---------YF 205
Cdd:PTZ00433 72 PPtvGSPEAREAVAT---YWRNSFVhkeslkstikKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGfphyetvckAY 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 206 GTLLLL-EDLGLKALEIPTDPAEGLllepladaIRCHRPAAVLASPTvqNPLGASMPVARKQELVALLEEAGIPLIEDDV 284
Cdd:PTZ00433 149 GIEMRFyNCRPEKDWEADLDEIRRL--------VDDRTKALIMTNPS--NPCGSNFSRKHVEDIIRLCEELRLPLISDEI 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 285 YGDLVGDGQRPPACKAFDQNGNVIYCSSLSKTL-APGWRIGWIaagryypqVLQARM--AGDW-----------AGA-PL 349
Cdd:PTZ00433 219 YAGMVFNGATFTSVADFDTTVPRVILGGTAKNLvVPGWRLGWL--------LLVDPHgnGGDFldgmkrlgmlvCGPcSV 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 350 LEAATSEMLANGDyDRHLRRLKRRIAEGiaAVVVRVKASFPPGTRVNVPAAGFLLWVELPPQV-----NALEVHRRAL-A 423
Cdd:PTZ00433 291 VQAALGEALLNTP-QEHLEQIVAKLEEG--AMVLYNHIGECIGLSPTMPRGSMFLMSRLDLEKfrdikSDVEFYEKLLeE 367
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 695737197 424 RGIGVSPGPLFS-PGaelthFLRLNcANEPTPRLLTAVEQIGALC 467
Cdd:PTZ00433 368 ENVQVLPGEIFHmPG-----FTRLT-ISRPVEVLREAVERIKAFC 406
|
|
| PRK08361 |
PRK08361 |
aspartate aminotransferase; Provisional |
98-463 |
2.54e-13 |
|
aspartate aminotransferase; Provisional
Pssm-ID: 236248 [Multi-domain] Cd Length: 391 Bit Score: 71.45 E-value: 2.54e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 98 RSLFSSAEA--RLIPLGAALPDpawlpGDALQRALHSVGRRLDAHGQSYSLPPGRRDLRSKIAARAAQ-WGARFGADDLI 174
Cdd:PRK08361 23 RELFERASKmeNVISLGIGEPD-----FDTPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKfYGVDVDVDNVI 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 175 ITAGATQALRLALRAVCQPGDVVAVEQPAYFGTLLLLEDLGLKALEIPTDPAEGLLLEP--LADAIRCHRPAAVLASPtv 252
Cdd:PRK08361 98 VTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPdeLLELITKRTRMIVINYP-- 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 253 QNPLGASMPVARKQELVALLEEAGIPLIEDDVYGDLVGDGQRP-PACK-AFDqngNVIYCSSLSKTLA-PGWRIGWIAAG 329
Cdd:PRK08361 176 NNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHyPMIKyAPD---NTILANSFSKTFAmTGWRLGFVIAP 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 330 ryyPQV------LQARMAGDWAGapLLEAATSEMLANGDYDRHLRRLKRRIAEGIAAVVVRVKASfpPGTRVNVPAAGFL 403
Cdd:PRK08361 253 ---EQVikdmikLHAYIIGNVAS--FVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEM--PHIKVFEPKGAFY 325
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 695737197 404 LWvelpPQVNALEVHRRALAR------GIGVSPGPLFSPGAEltHFLRLNCANEPTpRLLTAVEQI 463
Cdd:PRK08361 326 VF----ANIDETGMSSEDFAEwllekaRVVVIPGTAFGKAGE--GYIRISYATSKE-KLIEAMERM 384
|
|
| PRK07337 |
PRK07337 |
pyridoxal phosphate-dependent aminotransferase; |
144-466 |
4.01e-13 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180937 Cd Length: 388 Bit Score: 70.86 E-value: 4.01e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 144 YSLPPGRRDLRSKIAARAAQ-WGARFGADDLIITAGATQALRLALRAVCQPGDVVAVEQPAYFGTLLLLEDLGLKALEIP 222
Cdd:PRK07337 63 YTSALGLAPLREAIAAWYARrFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVP 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 223 TDPAEGLLLEplADAIRCHRPAA----VLASPTvqNPLGASMPVARKQELVALLEEAGIPLIEDDVYGDLVGDGQrPPAC 298
Cdd:PRK07337 143 SGPAERFQLT--AADVEAAWGERtrgvLLASPS--NPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAA-PVSA 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 299 KAFDQngNVIYCSSLSKTLA-PGWRIGWIAAgryyPQVLQA---RMAGDW---AGAPLLEAA----TSEMLAngDYDRHL 367
Cdd:PRK07337 218 LSLGD--DVITINSFSKYFNmTGWRLGWLVV----PEALVGtfeKLAQNLficASALAQHAAlacfEPDTLA--IYERRR 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 368 RRLKRR---IAEGIAAVvvrvkasfppGTRVNV-PAAGFLLW-----VELPPQVNALEVHRRALAR-GIGVSPGPLFSPg 437
Cdd:PRK07337 290 AEFKRRrdfIVPALESL----------GFKVPVmPDGAFYVYadcrgVAHPAAGDSAALTQAMLHDaGVVLVPGRDFGP- 358
|
330 340
....*....|....*....|....*....
gi 695737197 438 AELTHFLRLNCANEpTPRLLTAVEQIGAL 466
Cdd:PRK07337 359 HAPRDYIRLSYATS-MSRLEEAVARLGKL 386
|
|
| PRK07777 |
PRK07777 |
putative succinyldiaminopimelate transaminase DapC; |
92-389 |
6.95e-13 |
|
putative succinyldiaminopimelate transaminase DapC;
Pssm-ID: 236095 [Multi-domain] Cd Length: 387 Bit Score: 70.07 E-value: 6.95e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 92 TMSAVArslfssAEARLIPLGAALPD----PAWLpgDALQRALhsvgrrLDAHGQsYSLPPGRRDLRSKIAA-RAAQWGA 166
Cdd:PRK07777 16 EMSALA------VRTGAVNLGQGFPDedgpPEML--EAAQEAI------AGGVNQ-YPPGPGIPELRAAIAAqRRRRYGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 167 RFGAD-DLIITAGATQALRLALRAVCQPGDVVAVEQPAYFGTLLLLEDLGLKALEIPTDPAEG---LLLEPLADAIRCHR 242
Cdd:PRK07777 81 EYDPDtEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRgfaLDLDALRAAVTPRT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 243 PAAVLASPtvQNPLGAsmpVARKQELVALLE---EAGIPLIEDDVYGDLVGDGQRPPACKAFD-QNGNVIYCSSLSKTLA 318
Cdd:PRK07777 161 RALIVNSP--HNPTGT---VLTAAELAAIAElavEHDLLVITDEVYEHLVFDGARHLPLATLPgMRERTVTISSAAKTFN 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 319 -PGWRIGWIAAGRyyPQVLQARMAGDW----AGAPlLEAATSEMLANGD-YDRHLR---RLKR-RIAEGIAAVVVRVKAS 388
Cdd:PRK07777 236 vTGWKIGWACGPA--PLIAAVRAAKQYltyvGGAP-FQPAVAHALDHEDaWVAALRdslQAKRdRLAAGLAEAGFEVHDS 312
|
.
gi 695737197 389 F 389
Cdd:PRK07777 313 A 313
|
|
| PRK06225 |
PRK06225 |
pyridoxal phosphate-dependent aminotransferase; |
144-391 |
1.16e-12 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235749 [Multi-domain] Cd Length: 380 Bit Score: 69.40 E-value: 1.16e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 144 YSLPPGRRDLRSKIAARAAqwgarFGADDLIITAGATQALRLALRAVCQPGDVVAVEQPAYFGTLLLLEDLGLKALEIPT 223
Cdd:PRK06225 62 YPPPEGFPELRELILKDLG-----LDDDEALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPI 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 224 -DPAEGLLLEP--LADAIRCHRPAAVLASPTvqNPLGASMPVARKQELVALLEEAGIPLIEDDVYGDLvGDGQrPPACKA 300
Cdd:PRK06225 137 ySEECNYKLTPelVKENMDENTRLIYLIDPL--NPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDF-AREH-TLAAEY 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 301 FDQNGNVIYcsSLSKTLA-PGWRIGWIAAGRYYPQVLQARMAGDwAGAPLL--EAATSEMLANGDYDRHLRRLKRRIAEG 377
Cdd:PRK06225 213 APEHTVTSY--SFSKIFGmAGLRIGAVVATPDLIEVVKSIVIND-LGTNVIaqEAAIAGLKVKDEWIDRIRRTTFKNQKL 289
|
250
....*....|....
gi 695737197 378 IAAVVVRVKASFPP 391
Cdd:PRK06225 290 IKEAVDEIEGVFLP 303
|
|
| HTH_GNTR |
smart00345 |
helix_turn_helix gluconate operon transcriptional repressor; |
11-70 |
1.44e-12 |
|
helix_turn_helix gluconate operon transcriptional repressor;
Pssm-ID: 197669 [Multi-domain] Cd Length: 60 Bit Score: 62.21 E-value: 1.44e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 11 IAERLRLTLSSGALRVGDRMISARKLAEREHVSLPTALEALRCLEAEGLIVARPRSGYYI 70
Cdd:smart00345 1 VAERLREDIVSGELRPGDKLPSERELAAQLGVSRTTVREALSRLEAEGLVQRRPGSGTFV 60
|
|
| GntR |
pfam00392 |
Bacterial regulatory proteins, gntR family; This family of regulatory proteins consists of the ... |
8-70 |
3.05e-12 |
|
Bacterial regulatory proteins, gntR family; This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerization domain. The GntR-like proteins include the following sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA, DevA, DasR. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships. The DasR regulator has been shown to be a global regulator of primary metabolism and development in Streptomyces coelicolor.
Pssm-ID: 306822 [Multi-domain] Cd Length: 64 Bit Score: 61.48 E-value: 3.05e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 695737197 8 YRRIAERLRLTLSSGALRVGDRMISARKLAEREHVSLPTALEALRCLEAEGLIVARPRSGYYI 70
Cdd:pfam00392 2 YEQVYARLREDILSGRLRPGDKLPSERELAAEFGVSRTTVREALRRLEAEGLVERRQGRGTFV 64
|
|
| PRK05957 |
PRK05957 |
pyridoxal phosphate-dependent aminotransferase; |
152-326 |
3.35e-11 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235654 Cd Length: 389 Bit Score: 64.71 E-value: 3.35e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 152 DLRSKIAAR-AAQWGARFGADDLII-TAGATQALRLALRAVCQPGDVVAVEQPAYFGTLLLLEDLGLKALEIPTDPAEGL 229
Cdd:PRK05957 69 PLLEAITQKlQQDNGIELNNEQAIVvTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQL 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 230 LLEPLADAIRCHRPAAVLASPtvQNPLGASMPVARKQELVALLEEAGIPLIEDDVYGDLVGDGQRPPACKAFDQNGN-VI 308
Cdd:PRK05957 149 QPEAIEQAITPKTRAIVTISP--NNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNhTI 226
|
170
....*....|....*....
gi 695737197 309 YCSSLSKTLA-PGWRIGWI 326
Cdd:PRK05957 227 SLYSLSKAYGfASWRIGYM 245
|
|
| YhcF |
COG1725 |
DNA-binding transcriptional regulator YhcF, GntR family [Transcription]; |
1-84 |
9.21e-11 |
|
DNA-binding transcriptional regulator YhcF, GntR family [Transcription];
Pssm-ID: 441331 [Multi-domain] Cd Length: 114 Bit Score: 59.04 E-value: 9.21e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 1 MSAPSPHYRRIAERLRLTLSSGALRVGDRMISARKLAEREHVSLPTALEALRCLEAEGLIVARPRSGYYIHQISHPPRAE 80
Cdd:COG1725 5 FDSGVPIYEQIADQIKEAIASGELKPGDRLPSVRELAAELGVNPNTVAKAYRELEDEGLIETRRGKGTFVAEDARELLEE 84
|
....
gi 695737197 81 PARS 84
Cdd:COG1725 85 RREE 88
|
|
| PRK09148 |
PRK09148 |
LL-diaminopimelate aminotransferase; |
93-431 |
1.91e-10 |
|
LL-diaminopimelate aminotransferase;
Pssm-ID: 181674 [Multi-domain] Cd Length: 405 Bit Score: 62.39 E-value: 1.91e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 93 MSAVARSlfssAEARLIPLGAALPD-PAwlPGDALQRaLHSVGRRLDAHGqsYSLPPGRRDLRSkiaARAAQWGARFGAD 171
Cdd:PRK09148 21 LKAAARA----AGADIIDLGMGNPDlPT--PQHIVDK-LCETAQDPRTHR--YSASKGIPGLRR---AQAAYYARRFGVK 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 172 -----DLIITAGATQALRLALRAVCQPGDVVAVEQPAY----FGTLLLLEDLGLkaleIPTDPAEGlLLEPLADAIRCHR 242
Cdd:PRK09148 89 lnpdtQVVATLGSKEGFANMAQAITAPGDVILCPNPSYpihaFGFIMAGGVIRS----VPAEPDEE-FFPALERAVRHSI 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 243 P---AAVLASPTvqNPLGASMPVARKQELVALLEEAGIPLIEDDVYGDLVGDGQRPPACKAFDQNGNV-IYCSSLSKTLA 318
Cdd:PRK09148 164 PkpiALIVNYPS--NPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVtVEFTSMSKTFS 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 319 -PGWRIGWIAAGRYYPQVLqARMAG--DW-AGAPLLEAATSEMLANGDYDRHLRRLKRRIAEgiaavvVRVKASFPPGTR 394
Cdd:PRK09148 242 mAGWRMGFAVGNERLIAAL-TRVKSylDYgAFTPIQVAATAALNGPQDCIAEMRELYKKRRD------VLVESFGRAGWD 314
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 695737197 395 VNVPAAGFLLWVELPP---QVNALEVHRRALAR-GIGVSPG 431
Cdd:PRK09148 315 IPPPAASMFAWAPIPEafrHLGSLEFSKLLVEKaDVAVAPG 355
|
|
| PRK07366 |
PRK07366 |
LL-diaminopimelate aminotransferase; |
124-465 |
9.27e-10 |
|
LL-diaminopimelate aminotransferase;
Pssm-ID: 180947 Cd Length: 388 Bit Score: 60.46 E-value: 9.27e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 124 DALQRALHsvgrrlDAHGQSYSLPPGRRDLRSKiaarAAQW-GARFG-ADD-------LIITAGATQALRLAlraVCQPG 194
Cdd:PRK07366 50 EAIAQSLH------DPSTHGYLLFHGTLDFREA----AAQWyEQRFGlAVDpetevlpLIGSQEGTAHLPLA---VLNPG 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 195 DVVAVEQPAYFGTLLLLEDLGLKALEIPTDPAEGLLlePLADAIrchrPAAVLASPTV------QNPLGASMPVARKQEL 268
Cdd:PRK07366 117 DFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFL--PVFADI----PTEVLAQARLmvlsypHNPTTAIAPLSFFQEA 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 269 VALLEEAGIPLIEDDVYGDLVGDGQRPP--ACKAFDQNGNVIYCSSLSKTL-APGWRIGW-------IAAGRyypQVLQA 338
Cdd:PRK07366 191 VAFCQQHDLVLVHDFPYVDLVFDGEVEPpsILQADPEKSVSIEFFTLSKSYnMGGFRIGFaignaqlIQALR---QVKAV 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 339 RMAGDWAGapLLEAATSEMLANGDYDRHLRRL--KRRIAegiaavvvRVKASFPPGTRVNVPAAGFLLWVELPP--QVNA 414
Cdd:PRK07366 268 VDFNQYRG--ILNGAIAALTGPQATVQQTVQIfrQRRDA--------FINALHQIGWPVPLPEATMYVWAKLPEpwQGNS 337
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 695737197 415 LEVHRRALAR-GIGVSPGPLFSPGAEltHFLRLNCANEPtPRLLTAVEQIGA 465
Cdd:PRK07366 338 VEFCTQLVAQtGVAASPGSGFGKSGE--GYVRFALVHDP-DILEEAVERIAA 386
|
|
| MngR |
COG2188 |
DNA-binding transcriptional regulator, GntR family [Transcription]; |
2-70 |
1.13e-09 |
|
DNA-binding transcriptional regulator, GntR family [Transcription];
Pssm-ID: 441791 [Multi-domain] Cd Length: 238 Bit Score: 58.72 E-value: 1.13e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 695737197 2 SAPSPHYRRIAERLRLTLSSGALRVGDRMISARKLAEREHVSLPTALEALRCLEAEGLIVARPRSGYYI 70
Cdd:COG2188 1 SSPVPLYLQIADALRERIESGELPPGDRLPSERELAEEFGVSRMTVRKALDELVEEGLLERRQGRGTFV 69
|
|
| PRK07324 |
PRK07324 |
transaminase; Validated |
170-328 |
2.04e-09 |
|
transaminase; Validated
Pssm-ID: 235989 Cd Length: 373 Bit Score: 59.18 E-value: 2.04e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 170 ADDLIITAGATQALRLALRAVCQPGDVVAVEQPAYfgtlllledlgLKALEIP-----------TDPAEGLL--LEPLAD 236
Cdd:PRK07324 80 PENILQTNGATGANFLVLYALVEPGDHVISVYPTY-----------QQLYDIPeslgaevdywqLKEENGWLpdLDELRR 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 237 AIRCHRPAAVLASPtvQNPLGASMPVARKQELVALLEEAGIPLIEDDVYGDLVGDGQRPPACKAFDQNgnvIYCSSLSKT 316
Cdd:PRK07324 149 LVRPNTKLICINNA--NNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKG---ISTNSMSKT 223
|
170
....*....|...
gi 695737197 317 LA-PGWRIGWIAA 328
Cdd:PRK07324 224 YSlPGIRVGWIAA 236
|
|
| PRK06348 |
PRK06348 |
pyridoxal phosphate-dependent aminotransferase; |
144-337 |
2.84e-09 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180537 Cd Length: 384 Bit Score: 58.96 E-value: 2.84e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 144 YSLPPGRRDLRSKIAA-RAAQWGARFGADDLIITAGATQALRLALRAVCQPGDVVAVEQPAYFGTLLLLEDLGLKALEIP 222
Cdd:PRK06348 62 YTDSGGDVELIEEIIKyYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 223 TDPAEGLLLEP--LADAIRCHRPAAVLASPtvQNPLGASMPVARKQELVALLEEAGIPLIEDDVYGDLVGDGQRPPACKA 300
Cdd:PRK06348 142 TYEEDGFQINVkkLEALITSKTKAIILNSP--NNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATL 219
|
170 180 190
....*....|....*....|....*....|....*...
gi 695737197 301 FDQNGNVIYCSSLSKTLA-PGWRIGWIAAGRYYPQVLQ 337
Cdd:PRK06348 220 AGMPERTITFGSFSKDFAmTGWRIGYVIAPDYIIETAK 257
|
|
| PRK08960 |
PRK08960 |
pyridoxal phosphate-dependent aminotransferase; |
153-328 |
4.81e-09 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 181595 Cd Length: 387 Bit Score: 58.14 E-value: 4.81e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 153 LRSKIAARAAQ-WGARFGADDLIITAGATQALRLALRAVCQPGDVVAVEQPAYFGTLLLLEDLGLKALEIPTDPAEGLLL 231
Cdd:PRK08960 74 LREAIAGFYAQrYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQL 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 232 EPlADAIRCHRP---AAVLASPTvqNPLGASMPVARKQELVALLEEAGIPLIEDDVYGDLVGDGQRPPACKAFDQngnVI 308
Cdd:PRK08960 154 TP-ALVERHWNAdtvGALVASPA--NPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDD---AF 227
|
170 180
....*....|....*....|.
gi 695737197 309 YCSSLSKTLA-PGWRIGWIAA 328
Cdd:PRK08960 228 VLNSFSKYFGmTGWRLGWLVA 248
|
|
| PRK06107 |
PRK06107 |
aspartate transaminase; |
144-406 |
5.50e-09 |
|
aspartate transaminase;
Pssm-ID: 180403 Cd Length: 402 Bit Score: 57.82 E-value: 5.50e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 144 YSLPPGRRDLRSKIAARAA-QWGARFGADDLIITAGATQALRLALRAVCQPGDVVAVEQPAYFGTLLLLEDLGLKALEIP 222
Cdd:PRK06107 66 YTLVNGTPALRKAIIAKLErRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVA 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 223 TDPAEGLLLEP--LADAIRCHRPAAVLASPTvqNPLGASMPVARKQELVALLEE-AGIPLIEDDVYGDLVGDGQRPP--A 297
Cdd:PRK06107 146 CPEEQGFKLTPeaLEAAITPRTRWLILNAPS--NPTGAVYSRAELRALADVLLRhPHVLVLTDDIYDHIRFDDEPTPhlL 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 298 CKAFDQNGNVIYCSSLSKTLA-PGWRIGWIAAGRYYPQV---LQARMAGdwAGAPLLEAATSEMLaNGDYD------RHL 367
Cdd:PRK06107 224 AAAPELRDRVLVTNGVSKTYAmTGWRIGYAAGPADLIAAinkLQSQSSS--CPSSISQAAAAAAL-NGDQSfvtesvAVY 300
|
250 260 270
....*....|....*....|....*....|....*....
gi 695737197 368 RRLKRRIAEGIAAVvvrvkasfpPGTRVNVPAAGFLLWV 406
Cdd:PRK06107 301 KQRRDYALALLNAI---------PGLSCLVPDGAFYLYV 330
|
|
| PRK09276 |
PRK09276 |
LL-diaminopimelate aminotransferase; Provisional |
193-466 |
7.66e-09 |
|
LL-diaminopimelate aminotransferase; Provisional
Pssm-ID: 181749 Cd Length: 385 Bit Score: 57.61 E-value: 7.66e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 193 PGDVVAVEQPAYFGTLLLLEDLGLKALEIPTDPAEGLLlePLADAIrchrPAAVLASPTV------QNPLGASMPVARKQ 266
Cdd:PRK09276 116 PGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFL--PDLDAI----PEDVAKKAKLmfinypNNPTGAVADLEFFE 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 267 ELVALLEEAGIPLIEDDVYGDLVGDGQRPPACKAFDQNGNV-IYCSSLSKTL-APGWRIGWiAAGRyyPQVLQA----RM 340
Cdd:PRK09276 190 EVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVgIEFHSLSKTYnMTGWRIGF-AVGN--ADLIAGlgkvKS 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 341 AGDwAGAP--LLEAATSEMLANGDYDRHLRRL--KRR--IAEGIAAVvvrvkasfppGTRVNVPAAGFLLWVELPPQVNA 414
Cdd:PRK09276 267 NVD-SGVFqaIQEAGIAALNGPQEVVEELRKIyqERRdiLVEGLRKL----------GLEVEPPKATFYVWAPVPKGYTS 335
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 695737197 415 LEVHRRALAR-GIGVSPGPLFSPGAEltHFLRLNCAnEPTPRLLTAVEQIGAL 466
Cdd:PRK09276 336 AEFATLLLDKaGVVVTPGNGFGEYGE--GYFRIALT-VPDERIEEAVERIKKL 385
|
|
| FadR |
COG2186 |
DNA-binding transcriptional regulator, FadR family [Transcription]; |
8-108 |
7.77e-09 |
|
DNA-binding transcriptional regulator, FadR family [Transcription];
Pssm-ID: 441789 [Multi-domain] Cd Length: 232 Bit Score: 56.10 E-value: 7.77e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 8 YRRIAERLRLTLSSGALRVGDRMISARKLAEREHVSLPTALEALRCLEAEGLIVARPRSGYYIHQISHPPRAEPARSTPG 87
Cdd:COG2186 9 AEQVAEQLRELILSGELKPGDRLPSERELAEQLGVSRTTVREALRALEALGLVEVRQGGGTFVREPSPWALLDPLALLLA 88
|
90 100
....*....|....*....|...
gi 695737197 88 PVPVTMSAV--ARSLFSSAEARL 108
Cdd:COG2186 89 LDDASLRDLleARLALEPEAARL 111
|
|
| PRK08175 |
PRK08175 |
aminotransferase; Validated |
130-431 |
9.08e-09 |
|
aminotransferase; Validated
Pssm-ID: 181268 [Multi-domain] Cd Length: 395 Bit Score: 57.41 E-value: 9.08e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 130 LHSVGRRLDAHGqsYSLPPGRRDLRSKIAaraaQWGA-RFGAD-----DLIITAGATQAL-RLALrAVCQPGDVVAVEQP 202
Cdd:PRK08175 51 LCEVAQRPDTHG--YSTSRGIPRLRRAIS----RWYQdRYDVDidpesEAIVTIGSKEGLaHLML-ATLDHGDTVLVPNP 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 203 AYFGTLLLLEDLGLKALEIPTDPAEGLLLEpLADAIRCHRP---AAVLASPTvqNPLGASMPVARKQELVALLEEAGIPL 279
Cdd:PRK08175 124 SYPIHIYGAVIAGAQVRSVPLVEGVDFFNE-LERAIRESYPkpkMMILGFPS--NPTAQCVELEFFEKVVALAKRYDVLV 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 280 IEDDVYGDLVGDGQRPPACKAFDQNGNV-IYCSSLSKTL-APGWRIGWIAAGRYYPQVLqARMAG--DWAG-APLLEAAT 354
Cdd:PRK08175 201 VHDLAYADIVYDGWKAPSIMQVPGAKDVaVEFFTLSKSYnMAGWRIGFMVGNPELVSAL-ARIKSyhDYGTfTPLQVAAI 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 355 SEMLANGDYDRHLRRL--KRR--IAEGIAAVvvrvkasfppGTRVNVPAAGFLLWVELPP---QVNALEVHRRALAR-GI 426
Cdd:PRK08175 280 AALEGDQQCVRDIAEQykRRRdvLVKGLHEA----------GWMVEMPKASMYVWAKIPEpyaAMGSLEFAKKLLNEaKV 349
|
....*
gi 695737197 427 GVSPG 431
Cdd:PRK08175 350 CVSPG 354
|
|
| avtA |
PRK09440 |
valine--pyruvate transaminase; Provisional |
244-439 |
3.20e-08 |
|
valine--pyruvate transaminase; Provisional
Pssm-ID: 236517 Cd Length: 416 Bit Score: 55.63 E-value: 3.20e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 244 AAVLAS-PTvqNPLGASMPVARKQELVALLEEAGIPLIEDDVYG----DLVGDGQRPPAckafdqNGNVIYCSSLSKTLA 318
Cdd:PRK09440 181 GAICVSrPT--NPTGNVLTDEELEKLDALARQHNIPLLIDNAYGppfpGIIFSEATPLW------NPNIILCMSLSKLGL 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 319 PGWRIGWIAAGryyPQVLQA--RMAGDWAGAP--LLEAATSEMLANGDYDRHLRRLKRRIAEGIAAVVVRVKASFPPGTR 394
Cdd:PRK09440 253 PGVRCGIVIAD---EEIIEAlsNMNGIISLAPgrLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEP 329
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 695737197 395 VNV--PAAGFLLWV---ELPpqVNALEVHRRALARGIGVSPGPLFSPGAE 439
Cdd:PRK09440 330 CLIhkPEGAIFLWLwfkDLP--ITTEELYQRLKARGVLVVPGHYFFPGLD 377
|
|
| PLN00145 |
PLN00145 |
tyrosine/nicotianamine aminotransferase; Provisional |
143-328 |
3.46e-08 |
|
tyrosine/nicotianamine aminotransferase; Provisional
Pssm-ID: 215074 [Multi-domain] Cd Length: 430 Bit Score: 55.55 E-value: 3.46e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 143 SYSLPPGRRDLRSKIAAR-AAQWGARFGADDLIITAGATQALRLALRAVCQPGDVVAVEQPAYFGTLLLLEDLGLKALEI 221
Cdd:PLN00145 89 SYSTCVGLLPARRAIAEYlSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHF 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 222 PTDPAEGL-----LLEPLADAircHRPAAVLASPTvqNPLGAsmpVARKQELVALLEEA---GIPLIEDDVYGDLVGdGQ 293
Cdd:PLN00145 169 DLLPERGWevdleGVEALADE---NTVAMVIINPN--NPCGS---VYSYEHLAKIAETArklGILVIADEVYDHLTF-GS 239
|
170 180 190
....*....|....*....|....*....|....*...
gi 695737197 294 RP--PAcKAFDQNGNVIYCSSLSKT-LAPGWRIGWIAA 328
Cdd:PLN00145 240 KPfvPM-GVFGEVAPVLTLGSISKRwVVPGWRLGWIAT 276
|
|
| PLN02656 |
PLN02656 |
tyrosine transaminase |
167-325 |
4.60e-08 |
|
tyrosine transaminase
Pssm-ID: 178262 [Multi-domain] Cd Length: 409 Bit Score: 54.93 E-value: 4.60e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 167 RFGADDLIITAGATQALRLALRAVCQPGDVVAVEQPayfGTLLLLEDLGLKALEI------PTDPAEGLL--LEPLADAi 238
Cdd:PLN02656 93 KLSLDDVFITSGCTQAIDVALSMLARPGANILLPRP---GFPIYELCAAFRHLEVryvdllPEKGWEVDLdaVEALADQ- 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 239 rcHRPAAVLASPTvqNPLGASMPVARKQELVALLEEAGIPLIEDDVYGDLVGDGQRPPACKAFDQNGNVIYCSSLSKT-L 317
Cdd:PLN02656 169 --NTVALVIINPG--NPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRwI 244
|
....*...
gi 695737197 318 APGWRIGW 325
Cdd:PLN02656 245 VPGWRLGW 252
|
|
| PRK08912 |
PRK08912 |
aminotransferase; |
92-470 |
3.53e-07 |
|
aminotransferase;
Pssm-ID: 181580 Cd Length: 387 Bit Score: 52.28 E-value: 3.53e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 92 TMSAVARslfssaEARLIPLGAALPDpAWLPGDALQRALHSVgrrLDAHGQsYSLPPGRRDLRSKIAARAAQWgarFGAD 171
Cdd:PRK08912 18 VMSQLAR------EHGAINLGQGFPD-DPGPEDVRRAAADAL---LDGSNQ-YPPMMGLPELRQAVAAHYARF---QGLD 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 172 -----DLIITAGATQALRLALRAVCQPGDVVAVEQPAYfgtlLLLEDLGLKALEIP-----TDPAEGLLLEPLADAIRCH 241
Cdd:PRK08912 84 ldpetEVMVTSGATEALAAALLALVEPGDEVVLFQPLY----DAYLPLIRRAGGVPrlvrlEPPHWRLPRAALAAAFSPR 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 242 RPAAVLASPtvQNPLGASMPVARKQELVALLEEAGIPLIEDDVYGDLVGDGQRPPACKAF-DQNGNVIYCSSLSKTLA-P 319
Cdd:PRK08912 160 TKAVLLNNP--LNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLpGMRERTVKIGSAGKIFSlT 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 320 GWRIGWIAAGryyPQVLQARMAGD----WAGAPLLEAATSEMLANGD--YD---RHLRRLKRRIAEGIAAvvvrvkASFP 390
Cdd:PRK08912 238 GWKVGFVCAA---PPLLRVLAKAHqfltFTTPPNLQAAVAYGLGKPDdyFEgmrADLARSRDRLAAGLRR------IGFP 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 391 pgtrVNVPAAGFLLWVELPPQVNAL--EVHRRALARGIGVSPGPL--FSPGAELTHFLRLnCANEPTPRLLTAVEQIGAL 466
Cdd:PRK08912 309 ----VLPSQGTYFLTVDLAPLGLAEddVAFCRRLVEEAGVAAIPVsaFYEEDPVTSVVRF-CFAKRDATLDEAVERLAAA 383
|
....
gi 695737197 467 CHEL 470
Cdd:PRK08912 384 RRRR 387
|
|
| PRK07681 |
PRK07681 |
LL-diaminopimelate aminotransferase; |
193-463 |
5.41e-07 |
|
LL-diaminopimelate aminotransferase;
Pssm-ID: 181081 Cd Length: 399 Bit Score: 51.73 E-value: 5.41e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 193 PGDVVAVEQPAYFGTLLLLEDLGLKALEIPTDPAEGLL--LEPLADAIRCHRPAAVLASPTvqNPLGASMPVARKQELVA 270
Cdd:PRK07681 116 PGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLpdLELIPEEIADKAKMMILNFPG--NPVPAMAHEDFFKEVIA 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 271 LLEEAGIPLIEDDVYGDLVGDGQRPPACKAFDQNGNV-IYCSSLSKTLA-PGWRIGWIAAGryyPQVLQARMA----GDW 344
Cdd:PRK07681 194 FAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVgVEINSLSKSYSlAGSRIGYMIGN---EEIVRALTQfksnTDY 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 345 AGAPLLEAATSEMLANGDYDRHLRRL---KRR--IAEGIAAVvvrvkasfppGTRVNVPAAGFLLWVELPPQVNALEVHR 419
Cdd:PRK07681 271 GVFLPIQKAACAALRNGAAFCEKNRGiyqERRdtLVDGFRTF----------GWNVDKPAGSMFVWAEIPKGWTSLSFAY 340
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 695737197 420 RALAR-GIGVSPGPLFSPGAEltHFLRLNCAnEPTPRLLTAVEQI 463
Cdd:PRK07681 341 ALMDRaNVVVTPGHAFGPHGE--GFVRIALV-QDEEVLQQAVENI 382
|
|
| PLN02607 |
PLN02607 |
1-aminocyclopropane-1-carboxylate synthase |
166-410 |
1.29e-06 |
|
1-aminocyclopropane-1-carboxylate synthase
Pssm-ID: 215327 [Multi-domain] Cd Length: 447 Bit Score: 50.66 E-value: 1.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 166 ARFGADDLIITAGATQALRLALRAVCQPGDVVAVEQPAYFG-TLLLLEDLGLKALEIPTDPAEGLLLEPL--------AD 236
Cdd:PLN02607 116 ARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGfDRDLRWRTGVKIVPIHCDSSNNFQVTPQaleaayqeAE 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 237 AIRCHRPAAVLASPTvqNPLGASMPVARKQELVALLEEAGIPLIEDDVYG-------DLVGDGQRPPACKAFDQNGNVIY 309
Cdd:PLN02607 196 AANIRVRGVLITNPS--NPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSgsvfsasEFVSVAEIVEARGYKGVAERVHI 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 310 CSSLSKTLA-PGWRIGWIAAgrYYPQVLQA--RMAGDWAGAPLLEAATSEMLANGDY-DRHLRRLKRRIAEGIAAVVVRV 385
Cdd:PLN02607 274 VYSLSKDLGlPGFRVGTIYS--YNDKVVTTarRMSSFTLVSSQTQHLLASMLSDEEFtENYIRTNRERLRKRYEMIVQGL 351
|
250 260
....*....|....*....|....*
gi 695737197 386 KASFPPGTRVNvpaAGFLLWVELPP 410
Cdd:PLN02607 352 RRAGIECLKGN---AGLFCWMNLSP 373
|
|
| PLN00175 |
PLN00175 |
aminotransferase family protein; Provisional |
109-393 |
1.85e-06 |
|
aminotransferase family protein; Provisional
Pssm-ID: 215089 [Multi-domain] Cd Length: 413 Bit Score: 50.25 E-value: 1.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 109 IPLGAALPD---PAWLPGDALQrALHSvGRRLDAHGqsYSLPpgrrDLRSKIAAR-AAQWGARFGAD-DLIITAGATQAL 183
Cdd:PLN00175 57 INLGQGFPNfdgPDFVKEAAIQ-AIRD-GKNQYARG--FGVP----ELNSAIAERfKKDTGLVVDPEkEVTVTSGCTEAI 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 184 RLALRAVCQPGDVVAVEQPAYFGTLLLLEDLGLKALEIPTDPAE-GLLLEPLADAIRCHRPAAVLASPtvQNPLGASMPV 262
Cdd:PLN00175 129 AATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDfAVPEDELKAAFTSKTRAILINTP--HNPTGKMFTR 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 263 ARKQELVALLEEAGIPLIEDDVYGDLVGDGQRPPACKAFDQNGNVIYCSSLSKTLA-PGWRIGW-IAAGRYYPQVLQARM 340
Cdd:PLN00175 207 EELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSlTGWKIGWaIAPPHLTWGVRQAHS 286
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 695737197 341 AGDWAGA-PLLEAATSEMLANGDYDRHLRR----LKRRIAEGIAAVVVRVkasFPP-GT 393
Cdd:PLN00175 287 FLTFATAtPMQWAAVAALRAPESYYEELKRdysaKKDILVEGLKEVGFKV---YPSsGT 342
|
|
| PRK11523 |
PRK11523 |
transcriptional regulator ExuR; |
8-85 |
4.06e-06 |
|
transcriptional regulator ExuR;
Pssm-ID: 183176 [Multi-domain] Cd Length: 253 Bit Score: 48.30 E-value: 4.06e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 695737197 8 YRRIAERLRLTLSSGALRVGDRMISARKLAEREHVSLPTALEALRCLEAEGLIVARPRSGyyIHQISHPPRAEPARST 85
Cdd:PRK11523 10 YQQLAAELKERIEQGVYLVGDKLPAERFIADEKNVSRTVVREAIIMLEVEGYVEVRKGSG--IHVVSNQPRHQQAADN 85
|
|
| GntR |
COG1802 |
DNA-binding transcriptional regulator, GntR family [Transcription]; |
10-74 |
4.08e-06 |
|
DNA-binding transcriptional regulator, GntR family [Transcription];
Pssm-ID: 441407 [Multi-domain] Cd Length: 222 Bit Score: 47.61 E-value: 4.08e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 695737197 10 RIAERLRLTLSSGALRVGDRmISARKLAEREHVSLPTALEALRCLEAEGLIVARPRSGYYIHQIS 74
Cdd:COG1802 15 QVYEALREAILSGELPPGER-LSEAELAERLGVSRTPVREALRRLEAEGLVEIRPNRGARVAPLS 78
|
|
| PRK08636 |
PRK08636 |
LL-diaminopimelate aminotransferase; |
140-439 |
4.96e-06 |
|
LL-diaminopimelate aminotransferase;
Pssm-ID: 236316 Cd Length: 403 Bit Score: 48.55 E-value: 4.96e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 140 HGqsYSLPPGRRDLRSKIAaraaQWGAR-FGAD-----DLIITAGATQALRLALRAVCQPGDVVAVEQPAY------F-- 205
Cdd:PRK08636 65 HG--YSVSKGIYKLRLAIC----NWYKRkYNVDldpetEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYpihsqaFil 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 206 --GTLLLLEDLGLKALEIPtdpaEGLLLEPLADAIRCHRPAA---VLASPtvQNPLGASMPVARKQELVALLEEAGIPLI 280
Cdd:PRK08636 139 agGNVHKMPLEYNEDFELD----EDQFFENLEKALRESSPKPkyvVVNFP--HNPTTATVEKSFYERLVALAKKERFYII 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 281 EDDVYGDLVGDGQRPPACKAFDQNGNV-IYCSSLSKT--LApGWRIGWIAAGRYYPQVLQArmAGDWAG----APLLEAA 353
Cdd:PRK08636 213 SDIAYADITFDGYKTPSILEVEGAKDVaVESYTLSKSynMA-GWRVGFVVGNKKLVGALKK--IKSWLDygmfTPIQVAA 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 354 TSEMlaNGDYD--RHLRRL--KRRiaegiaavVVRVKASFPPGTRVNVPAAGFLLWVELPPQV---NALEVHRRALARG- 425
Cdd:PRK08636 290 TIAL--DGDQScvEEIRETyrKRR--------DVLIESFANAGWELQKPRASMFVWAKIPEPArhlGSLEFSKQLLTEAk 359
|
330
....*....|....
gi 695737197 426 IGVSPGPLFSPGAE 439
Cdd:PRK08636 360 VAVSPGIGFGEYGD 373
|
|
| PLN00143 |
PLN00143 |
tyrosine/nicotianamine aminotransferase; Provisional |
167-326 |
5.81e-06 |
|
tyrosine/nicotianamine aminotransferase; Provisional
Pssm-ID: 165711 [Multi-domain] Cd Length: 409 Bit Score: 48.47 E-value: 5.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 167 RFGADDLIITAGATQALRLALRAVCQPGDVVAVEQPAYFGTLLLLEDLGLKALEIPTDPAEGL-----LLEPLADAircH 241
Cdd:PLN00143 94 QLSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWevdldAVEAIADE---N 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 242 RPAAVLASPTvqNPLGASMPVARKQELVALLEEAGIPLIEDDVYGDLVGDGQRPPACKAFDQNGNVIYCSSLSKT-LAPG 320
Cdd:PLN00143 171 TIAMVIINPG--NPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRwMIPG 248
|
....*.
gi 695737197 321 WRIGWI 326
Cdd:PLN00143 249 WGLGWL 254
|
|
| PRK05942 |
PRK05942 |
aspartate aminotransferase; Provisional |
185-439 |
1.27e-05 |
|
aspartate aminotransferase; Provisional
Pssm-ID: 180317 Cd Length: 394 Bit Score: 47.41 E-value: 1.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 185 LALrAVCQPGDVVAVEQPAYFGTLLLLEDLGLKALEIPTDPAEGLLLEPLADAIRCHRPAAVLASPTVQNPLGASMPVAR 264
Cdd:PRK05942 113 LAL-AYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAPREF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 265 KQELVALLEEAGIPLIEDDVYGDLVGDGQRP------PACKAFDqngnvIYCSSLSKTL-APGWRIGWIAAGRYYPQVLQ 337
Cdd:PRK05942 192 FEEIVAFARKYEIMLVHDLCYAELAFDGYQPtslleiPGAKDIG-----VEFHTLSKTYnMAGWRVGFVVGNRHIIQGLR 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 338 A-RMAGDWAGAPLLEAATSEMLANGdyDRHLRRLKRRIAEGIAAVVVRVKASfppGTRVNVPAAGFLLWVELPPQVNALE 416
Cdd:PRK05942 267 TlKTNLDYGIFSALQKAAETALQLP--DSYLQQVQERYRTRRDFLIQGLGEL---GWNIPPTKATMYLWVPCPVGMGSTD 341
|
250 260
....*....|....*....|....
gi 695737197 417 VHRRALAR-GIGVSPGPLFSPGAE 439
Cdd:PRK05942 342 FALNVLQKtGVVVTPGNAFGEGGE 365
|
|
| PRK12414 |
PRK12414 |
putative aminotransferase; Provisional |
116-328 |
1.33e-05 |
|
putative aminotransferase; Provisional
Pssm-ID: 183514 Cd Length: 384 Bit Score: 47.47 E-value: 1.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 116 PDPAWLPGDAlqRALHsvgrrlDAHGQsYSLPPGRRDLRSKIAARAAQ-WGARFGAD-DLIITAGATQALRLALRAVCQP 193
Cdd:PRK12414 43 PDPALVEGVA--RAMR------DGHNQ-YAPMAGIAALREALAEKTERlYGARYDPAsEVTVIASASEGLYAAISALVHP 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 194 GDVVAVEQPAYFGTLLLLEDLGLKALEIPTDPAE-GLLLEPLADAIRCHRPAAVLASPtvQNPLGASMPVARKQELVALL 272
Cdd:PRK12414 114 GDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDfRVNWDEVAAAITPRTRMIIVNTP--HNPSATVFSAADLARLAQLT 191
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 695737197 273 EEAGIPLIEDDVYGDLVGDGQR--PPACKAFDQNGNVIyCSSLSKTL-APGWRIGWIAA 328
Cdd:PRK12414 192 RNTDIVILSDEVYEHVVFDGARhhSMARHRELAERSVI-VSSFGKSYhVTGWRVGYCLA 249
|
|
| AAT_I |
cd01494 |
Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP) ... |
169-319 |
1.77e-05 |
|
Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), and D-amino acid superfamily (fold type IV) and Glycogen phophorylase family (fold type V).
Pssm-ID: 99742 [Multi-domain] Cd Length: 170 Bit Score: 45.07 E-value: 1.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 169 GADDLIITAGATQALRLALRAVCQPGDVVAVEQPAYFGTLLLLEDLG-LKALEIPTDPAEGLLLEP--LADAIRCHRPAA 245
Cdd:cd01494 16 GNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAgAKPVPVPVDDAGYGGLDVaiLEELKAKPNVAL 95
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 695737197 246 VLASPTVQNPLGasmpVARKQELVALLEEAGIPLIEDDVYgdlVGDGQRPPACKAFDQNGNVIYcSSLSKTLAP 319
Cdd:cd01494 96 IVITPNTTSGGV----LVPLKEIRKIAKEYGILLLVDAAS---AGGASPAPGVLIPEGGADVVT-FSLHKNLGG 161
|
|
| PLN03026 |
PLN03026 |
histidinol-phosphate aminotransferase; Provisional |
148-327 |
6.29e-05 |
|
histidinol-phosphate aminotransferase; Provisional
Pssm-ID: 178597 Cd Length: 380 Bit Score: 45.07 E-value: 6.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 148 PGRRDLRSKIAARAAqwgarFGADDLIITAGATQALRLALRAVCQPGDVVAVEQPAYFGTLLLLEDLGLKALEIPTDPAE 227
Cdd:PLN03026 86 PESRRLRAALAEDSG-----LESENILVGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDF 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 228 GLLLEPLADAIRCHRPAAV-LASPtvQNPLGASMPVArkqELVALLEEAGIpLIEDDVYGDLVGDGQRPPACKAFDqngN 306
Cdd:PLN03026 161 SLDVPRIVEAVETHKPKLLfLTSP--NNPDGSIISDD---DLLKILELPIL-VVLDEAYIEFSTQESRMKWVKKYD---N 231
|
170 180
....*....|....*....|..
gi 695737197 307 VIYCSSLSKTLA-PGWRIGWIA 327
Cdd:PLN03026 232 LIVLRTFSKRAGlAGLRVGYGA 253
|
|
| PRK09764 |
PRK09764 |
GntR family transcriptional regulator; |
3-72 |
1.18e-04 |
|
GntR family transcriptional regulator;
Pssm-ID: 182065 [Multi-domain] Cd Length: 240 Bit Score: 43.66 E-value: 1.18e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 3 APSPHYRRIAERLRLTLSSGALRVGDRMISARKLAEREHVSLPTALEALRCLEAEGLIVARPRSGYYIHQ 72
Cdd:PRK09764 2 GHKPLYRQIADRIREQIARGELKPGDALPTESALQTEFGVSRVTVRQALRQLVEQQILESIQGSGTYVKE 71
|
|
| PRK10225 |
PRK10225 |
Uxu operon transcriptional regulator; |
8-117 |
1.39e-04 |
|
Uxu operon transcriptional regulator;
Pssm-ID: 182318 [Multi-domain] Cd Length: 257 Bit Score: 43.47 E-value: 1.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 8 YRRIAERLRLTLSSGALRVGDRMISARKLAEREHVSLPTALEALRCLEAEGLIVARPRSGYYIHQISHPPRAEPARST-- 85
Cdd:PRK10225 11 YQEVGAMIRDLIIKTPYNPGERLPPEREIAEMLDVTRTVVREALIMLEIKGLVEVRRGAGIYVLDSSGSHNTDSPDANvc 90
|
90 100 110
....*....|....*....|....*....|....
gi 695737197 86 --PGPVPVTMsavARSLFSSAEARLIPLGAALPD 117
Cdd:PRK10225 91 ndAGPFELLQ---ARQLLESNIAEFAALQATRED 121
|
|
| PRK08068 |
PRK08068 |
transaminase; Reviewed |
254-466 |
3.71e-04 |
|
transaminase; Reviewed
Pssm-ID: 181219 Cd Length: 389 Bit Score: 42.60 E-value: 3.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 254 NPLGASMPVARKQELVALLEEAGIPLIEDDVYGDLVGDGQRPPackAFDQN------GNVIYcsSLSKT--LApGWRIGW 325
Cdd:PRK08068 178 NPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPV---SFLQTpgakdvGIELY--TLSKTfnMA-GWRVAF 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 326 iAAGRyyPQVLQA------RMAGDWAGApLLEAATSEMLANgdyDRHLRRLKRRIAEGIAAVVVRVKASfppGTRVNVPA 399
Cdd:PRK08068 252 -AVGN--ESVIEAinllqdHLFVSLFGA-IQDAAIEALLSD---QSCVAELVARYESRRNAFISACREI---GWEVDAPK 321
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 695737197 400 AGFLLWVELPPQVNALEVHRRALAR-GIGVSPGPLFSPGAEltHFLRLNCANEPTpRLLTAVEQIGAL 466
Cdd:PRK08068 322 GSFFAWMPVPKGYTSEQFADLLLEKaHVAVAPGNGFGEHGE--GYVRVGLLTDEE-RLREAVERIGKL 386
|
|
| PRK03317 |
PRK03317 |
histidinol-phosphate aminotransferase; Provisional |
228-328 |
5.06e-04 |
|
histidinol-phosphate aminotransferase; Provisional
Pssm-ID: 235115 Cd Length: 368 Bit Score: 42.16 E-value: 5.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 228 GLLLEPLADAIRCHRPAAV-LASPtvQNPLGASMPVArkqELVALLEEAGIPLIEDDVYGDLVGDGQrPPACKAFDQNGN 306
Cdd:PRK03317 146 TLDVDAAVAAIAEHRPDVVfLTSP--NNPTGTALPLD---DVEAILDAAPGIVVVDEAYAEFRRSGT-PSALTLLPEYPR 219
|
90 100
....*....|....*....|...
gi 695737197 307 VIYCSSLSKTLA-PGWRIGWIAA 328
Cdd:PRK03317 220 LVVSRTMSKAFAfAGGRLGYLAA 242
|
|
| PRK10421 |
PRK10421 |
DNA-binding transcriptional repressor LldR; Provisional |
10-86 |
1.43e-03 |
|
DNA-binding transcriptional repressor LldR; Provisional
Pssm-ID: 236690 [Multi-domain] Cd Length: 253 Bit Score: 40.52 E-value: 1.43e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 695737197 10 RIAERLRLTLSSGALRVGDRMISARKLAEREHVSLPTALEALRCLEAEGLIVARPRSGYYIHQiSHPPRAEPARSTP 86
Cdd:PRK10421 6 EVADRVRALIEEKNLEAGMKLPAERQLAMQLGVSRNSLREALAKLVSEGVLLSRRGGGTFIRW-RHETWSEQNIVQP 81
|
|
| PRK03837 |
PRK03837 |
transcriptional regulator NanR; Provisional |
13-103 |
1.73e-03 |
|
transcriptional regulator NanR; Provisional
Pssm-ID: 235166 [Multi-domain] Cd Length: 241 Bit Score: 40.01 E-value: 1.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 13 ERLRLTLSSGALRVGDRMISARKLAEREHVSLPTALEALRCLEAEGLIvarprsgyyihQISHPPRAEPARSTPGPVPVT 92
Cdd:PRK03837 20 ERLEQMIRSGEFGPGDQLPSERELMAFFGVGRPAVREALQALKRKGLV-----------QISHGERARVSRPSADTIIGQ 88
|
90
....*....|.
gi 695737197 93 MSAVARSLFSS 103
Cdd:PRK03837 89 LSGMAKDFLSQ 99
|
|
| MntR |
COG1321 |
Mn-dependent transcriptional regulator MntR, DtxR family [Transcription]; |
15-69 |
2.38e-03 |
|
Mn-dependent transcriptional regulator MntR, DtxR family [Transcription];
Pssm-ID: 440932 [Multi-domain] Cd Length: 135 Bit Score: 38.26 E-value: 2.38e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 695737197 15 LRLTLSSGALRVGDrmisarkLAEREHVSLPTALEALRCLEAEGLIVARPRSGYY 69
Cdd:COG1321 16 YELSEEGGPVRTSD-------IAERLGVSPPSVTEMLKKLEEKGLVEYEPYGGIT 63
|
|
| PRK05166 |
PRK05166 |
histidinol-phosphate transaminase; |
70-270 |
2.80e-03 |
|
histidinol-phosphate transaminase;
Pssm-ID: 179950 Cd Length: 371 Bit Score: 39.74 E-value: 2.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 70 IHQISHPPRAEPARSTPGPVPVTMSAVARSLFSSAEARLI----PLGaalpdpawlPGDALQRALHSVGrrldAHGQSYS 145
Cdd:PRK05166 3 MAPPSSLARAEVRPLPPYNAGLTIEEVRARYGVPRIAKLGsnenPLG---------PSPAVRRAFADIA----ELLRLYP 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 146 LPPGRrDLRSKIAARAAqwgarFGADDLIITAGATQALRLALRAVCQPGDVVAVEQPAYFGTLLLLEDLGLKALEIPTDP 225
Cdd:PRK05166 70 DPQGR-ALREAIAARTG-----VPADRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTP 143
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 695737197 226 AEGLLLEPLADAIRCHRPAAVLASPTvqNPLGASMPVARKQELVA 270
Cdd:PRK05166 144 DLGFDLDALCAAVARAPRMLMFSNPS--NPVGSWLTADQLARVLD 186
|
|
| PLN02187 |
PLN02187 |
rooty/superroot1 |
91-327 |
4.12e-03 |
|
rooty/superroot1
Pssm-ID: 215119 [Multi-domain] Cd Length: 462 Bit Score: 39.71 E-value: 4.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 91 VTMSAVARSLFSS----AEARLIPLGAAlpDPAWLP--------GDALQRALHSvgRRLDAHGQSYSLPPGRRDLRSKIA 158
Cdd:PLN02187 47 VTLRGVIYMLFDNcgkdVNKTILPLGHG--DPSVYPcfrtcieaEDAVVDVLRS--GKGNSYGPGAGILPARRAVADYMN 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 159 ARAAQwgaRFGADDLIITAGATQALRLALRAVCQPGDVVAVEQPAY--FGTLLLLEDLGLKALEIPTDPAEGLLLEPLAD 236
Cdd:PLN02187 123 RDLPH---KLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFphYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEA 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 237 AIRCHRPAAVLASPtvQNPLGASMPVARKQELVALLEEAGIPLIEDDVYGDLVGDGQRPPACKAFDQNGNVIYCSSLSKT 316
Cdd:PLN02187 200 IADENTVAMVVINP--NNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKG 277
|
250
....*....|..
gi 695737197 317 -LAPGWRIGWIA 327
Cdd:PLN02187 278 wVVPGWKIGWIA 289
|
|
| PRK09990 |
PRK09990 |
DNA-binding transcriptional regulator GlcC; Provisional |
11-111 |
7.55e-03 |
|
DNA-binding transcriptional regulator GlcC; Provisional
Pssm-ID: 182186 [Multi-domain] Cd Length: 251 Bit Score: 38.21 E-value: 7.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695737197 11 IAERLRLTLSSGALRVGDRMISARKLAEREHVSLPTALEALRCLEAEGLIVARPRSGYYIHQISHPPRAEPARSTPGPVP 90
Cdd:PRK09990 12 VAERIERLIVDGVLKVGQALPSERRLCEKLGFSRSALREGLTVLRGRGIIETAQGRGSFVARLNRVQDASPLMHLFSSQP 91
|
90 100
....*....|....*....|...
gi 695737197 91 VTMSAV--ARSLFSSAEARLIPL 111
Cdd:PRK09990 92 RTLYDLleVRALLEGESARLAAL 114
|
|
| |
