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Conserved domains on  [gi|696271546|ref|WP_032847972|]
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MULTISPECIES: toxin-antitoxin system YwqK family antitoxin [Fusobacterium]

Protein Classification

toxin-antitoxin system YwqK family antitoxin( domain architecture ID 11458243)

toxin-antitoxin (TA) system YwqK family antitoxin similar to YwqK (RtbO) antitoxin, the antitoxin component of the YwqJK (RtbNO) TA system that is encoded in the chromosome of Bacillus subtilis subsp. subtilis str. 168

PubMed:  31075979

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YwqK COG2849
Antitoxin component YwqK of the YwqJK toxin-antitoxin module [Defense mechanisms];
30-141 1.89e-14

Antitoxin component YwqK of the YwqJK toxin-antitoxin module [Defense mechanisms];


:

Pssm-ID: 442097 [Multi-domain]  Cd Length: 163  Bit Score: 67.40  E-value: 1.89e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 696271546  30 NPDKINILKKGILNGPISIYYPNGKIQSKQFFINNRKAGIWQYFYENGKLKTEIVYNimSNEEEGIMKNYDEKGVIISEG 109
Cdd:COG2849   54 KLGKGLGKYKKGKLGEWKTYYPNGQLKSEGTYKNGKLEGEWKEYYENGKLKSEGNYK--NGKLHGEWKEYYENGKLKEEG 131

                         90       100       110
                 ....*....|....*....|....*....|..
gi 696271546 110 KIINDNMAGVWNHYDEKGRKNYTYNFEKGIVI 141
Cdd:COG2849  132 NYKNGKKDGVWKYYDENGKLVKEEEYKNGKKV 163
 
Name Accession Description Interval E-value
YwqK COG2849
Antitoxin component YwqK of the YwqJK toxin-antitoxin module [Defense mechanisms];
30-141 1.89e-14

Antitoxin component YwqK of the YwqJK toxin-antitoxin module [Defense mechanisms];


Pssm-ID: 442097 [Multi-domain]  Cd Length: 163  Bit Score: 67.40  E-value: 1.89e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 696271546  30 NPDKINILKKGILNGPISIYYPNGKIQSKQFFINNRKAGIWQYFYENGKLKTEIVYNimSNEEEGIMKNYDEKGVIISEG 109
Cdd:COG2849   54 KLGKGLGKYKKGKLGEWKTYYPNGQLKSEGTYKNGKLEGEWKEYYENGKLKSEGNYK--NGKLHGEWKEYYENGKLKEEG 131

                         90       100       110
                 ....*....|....*....|....*....|..
gi 696271546 110 KIINDNMAGVWNHYDEKGRKNYTYNFEKGIVI 141
Cdd:COG2849  132 NYKNGKKDGVWKYYDENGKLVKEEEYKNGKKV 163
 
Name Accession Description Interval E-value
YwqK COG2849
Antitoxin component YwqK of the YwqJK toxin-antitoxin module [Defense mechanisms];
30-141 1.89e-14

Antitoxin component YwqK of the YwqJK toxin-antitoxin module [Defense mechanisms];


Pssm-ID: 442097 [Multi-domain]  Cd Length: 163  Bit Score: 67.40  E-value: 1.89e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 696271546  30 NPDKINILKKGILNGPISIYYPNGKIQSKQFFINNRKAGIWQYFYENGKLKTEIVYNimSNEEEGIMKNYDEKGVIISEG 109
Cdd:COG2849   54 KLGKGLGKYKKGKLGEWKTYYPNGQLKSEGTYKNGKLEGEWKEYYENGKLKSEGNYK--NGKLHGEWKEYYENGKLKEEG 131

                         90       100       110
                 ....*....|....*....|....*....|..
gi 696271546 110 KIINDNMAGVWNHYDEKGRKNYTYNFEKGIVI 141
Cdd:COG2849  132 NYKNGKKDGVWKYYDENGKLVKEEEYKNGKKV 163
YwqK COG2849
Antitoxin component YwqK of the YwqJK toxin-antitoxin module [Defense mechanisms];
30-148 4.77e-03

Antitoxin component YwqK of the YwqJK toxin-antitoxin module [Defense mechanisms];


Pssm-ID: 442097 [Multi-domain]  Cd Length: 163  Bit Score: 36.20  E-value: 4.77e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 696271546  30 NPDKINILKKGILNGPISIYYPNGKIQSKQFFINNRKAGIWQYFYENGKLKTEIVYN---IMSNEEEGIMKNYDEKGVII 106
Cdd:COG2849    1 KKKEGLLKISKYLLSLKLKYELGDTLLEKNGYKSGVKEKTEDSYNEGGKLIKKKLGKglgKYKKGKLGEWKTYYPNGQLK 80

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 696271546 107 SEGKIINDNMAGVWNHYDEKGRKNYTYNFEK----GIVIIYDEKGK 148
Cdd:COG2849   81 SEGTYKNGKLEGEWKEYYENGKLKSEGNYKNgklhGEWKEYYENGK 126
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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