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Conserved domains on  [gi|697052220|ref|WP_033144826|]
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MULTISPECIES: type 1 fimbria D-mannose specific adhesin FimH [Enterobacter]

Protein Classification

fimbrial protein( domain architecture ID 646)

fimbrial protein similar to the type-1 fimbrial major subunit FimA, which is transported to the outer membrane by the lipoprotein sorting system, and a mature or processed FimA protein on the outer membrane is autopolymerized to form Fim fimbriae

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Fimbrial super family cl01416
Fimbrial protein;
1-335 0e+00

Fimbrial protein;


The actual alignment was detected with superfamily member PRK15199:

Pssm-ID: 445401  Cd Length: 335  Bit Score: 571.46  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220   1 MIKTQLFALSLLALLPATNALATVCVNEKGVPTEVHYDLTDKFNSSNNQIGQVVTLSEKSQWVGVNAVCPKGTTGNTTKR 80
Cdd:PRK15199   1 MKIYSALLLAMACLCLANPAWATVCANSTGVAEDEHYDLSNVFNSTNNQPGQIVTLPEKSGWVGVNAICPPGTLVNYTYR 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220  81 SYVTDYPVTGTSDGYQYLKLNDYLDGAMKITDSYAGVFYPPKSYIQMGSHPNVSKNKPFGVQDSSLVFRLKVTRRFINMV 160
Cdd:PRK15199  81 SYVTNFPVQETIDNYKYMKLNDYLLGAMSIVDSVAGIFYPPQNYIRMGTDPNVSQNLPFGVMDSKLIFRLKVIRPFINMV 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220 161 VIPRATMFRVYVTTTSSDPLTTPVYTISYSGTIQVPQSCAINAGNVVEFDFGDIGASLFSKAGVGNKPEGVSSQSKTIAI 240
Cdd:PRK15199 161 EIPRQTMFTVYVTTTPYDPLVTPVYTISYSGRVEVPQNCELNAGQVVEFDFGDIGASLFSQAGAGNRPQGVMPQTKTIAI 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220 241 KCTNVEANAMLTMRVEAEKVSDNVLVSDNPDVGFIIANESGAPLTPNNLTSKIPFRLDDSAQAQVGIRVWPVSVTGNKPA 320
Cdd:PRK15199 241 KCTNVAAQAYLTMRLEAEKVSGQAMVSDNPDLGFIVADQNGTPLTPNNLNSKIPFRLDDAAAANVGIRAWPISITGQKPT 320

                        330
                 ....*....|....*
gi 697052220 321 EGRFTSRGYLRVDYD 335
Cdd:PRK15199 321 EGPFTARGYLRVDYD 335
 
Name Accession Description Interval E-value
fimH PRK15199
type 1 fimbrin D-mannose specific adhesin FimH;
1-335 0e+00

type 1 fimbrin D-mannose specific adhesin FimH;


Pssm-ID: 237921  Cd Length: 335  Bit Score: 571.46  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220   1 MIKTQLFALSLLALLPATNALATVCVNEKGVPTEVHYDLTDKFNSSNNQIGQVVTLSEKSQWVGVNAVCPKGTTGNTTKR 80
Cdd:PRK15199   1 MKIYSALLLAMACLCLANPAWATVCANSTGVAEDEHYDLSNVFNSTNNQPGQIVTLPEKSGWVGVNAICPPGTLVNYTYR 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220  81 SYVTDYPVTGTSDGYQYLKLNDYLDGAMKITDSYAGVFYPPKSYIQMGSHPNVSKNKPFGVQDSSLVFRLKVTRRFINMV 160
Cdd:PRK15199  81 SYVTNFPVQETIDNYKYMKLNDYLLGAMSIVDSVAGIFYPPQNYIRMGTDPNVSQNLPFGVMDSKLIFRLKVIRPFINMV 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220 161 VIPRATMFRVYVTTTSSDPLTTPVYTISYSGTIQVPQSCAINAGNVVEFDFGDIGASLFSKAGVGNKPEGVSSQSKTIAI 240
Cdd:PRK15199 161 EIPRQTMFTVYVTTTPYDPLVTPVYTISYSGRVEVPQNCELNAGQVVEFDFGDIGASLFSQAGAGNRPQGVMPQTKTIAI 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220 241 KCTNVEANAMLTMRVEAEKVSDNVLVSDNPDVGFIIANESGAPLTPNNLTSKIPFRLDDSAQAQVGIRVWPVSVTGNKPA 320
Cdd:PRK15199 241 KCTNVAAQAYLTMRLEAEKVSGQAMVSDNPDLGFIVADQNGTPLTPNNLNSKIPFRLDDAAAANVGIRAWPISITGQKPT 320

                        330
                 ....*....|....*
gi 697052220 321 EGRFTSRGYLRVDYD 335
Cdd:PRK15199 321 EGPFTARGYLRVDYD 335
Fimbrial pfam00419
Fimbrial protein;
187-335 5.96e-20

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 84.79  E-value: 5.96e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220  187 ISYSGTI-QVPQSCAINAGNVVEFDFGDIGASLFSKAGVGNkpegvSSQSKTIAIKCTNVEANAMLTMRVEAEK--VSDN 263
Cdd:pfam00419   1 INFTGTVtRVPATCKITAGTPIEVDFGQIPVNELNAGGEGS-----RQKPFSITLECSSGSSAVKVTVGLFGTAdaSSPN 75

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 697052220  264 VLVSDN-----PDVGFIIANESGAPLTPNNLTSKIPFRLDDSAQAQVGIRVWPVSVTGNKPAEGRFTSRGYLRVDYD 335
Cdd:pfam00419  76 LLLTGNgagaaTGVGIRLYDANGGALPPNNGTSSIPVSATAAVATGITFTASLVATTGGTPTAGDFNATATIVVDYQ 152
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
176-335 3.17e-14

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 69.68  E-value: 3.17e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220 176 SSDPLTTPVYTISYSGTIqVPQSCAINAGNV-VEFDFGDIGASLFSKAGvgnkpEGVSSQSKTIAIK-CTNVEANAmLTM 253
Cdd:COG3539   15 SAAAAAAADGTVNFTGTV-VAPTCTINTGSKdQTVDLGTVSTSDLNGVG-----STSGPKPFSIKLTnCDAGTSNS-VKV 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220 254 RVEAEKVSD------NVLVSDNPDVGFIIANESGAPLTPNNLTSKIPfrLDDSAQAQVGIRVWPVSvTGNKPAEGRFTSR 327
Cdd:COG3539   88 TFTGTADSAnpgllaNTGSGGASGVGIQLLDSDGTPIPLGTPSSAVT--LTSNGSATLPFYARYVA-TGATVTAGSFNAT 164


                 ....*...
gi 697052220 328 GYLRVDYD 335
Cdd:COG3539  165 ATFTIDYQ 172
 
Name Accession Description Interval E-value
fimH PRK15199
type 1 fimbrin D-mannose specific adhesin FimH;
1-335 0e+00

type 1 fimbrin D-mannose specific adhesin FimH;


Pssm-ID: 237921  Cd Length: 335  Bit Score: 571.46  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220   1 MIKTQLFALSLLALLPATNALATVCVNEKGVPTEVHYDLTDKFNSSNNQIGQVVTLSEKSQWVGVNAVCPKGTTGNTTKR 80
Cdd:PRK15199   1 MKIYSALLLAMACLCLANPAWATVCANSTGVAEDEHYDLSNVFNSTNNQPGQIVTLPEKSGWVGVNAICPPGTLVNYTYR 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220  81 SYVTDYPVTGTSDGYQYLKLNDYLDGAMKITDSYAGVFYPPKSYIQMGSHPNVSKNKPFGVQDSSLVFRLKVTRRFINMV 160
Cdd:PRK15199  81 SYVTNFPVQETIDNYKYMKLNDYLLGAMSIVDSVAGIFYPPQNYIRMGTDPNVSQNLPFGVMDSKLIFRLKVIRPFINMV 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220 161 VIPRATMFRVYVTTTSSDPLTTPVYTISYSGTIQVPQSCAINAGNVVEFDFGDIGASLFSKAGVGNKPEGVSSQSKTIAI 240
Cdd:PRK15199 161 EIPRQTMFTVYVTTTPYDPLVTPVYTISYSGRVEVPQNCELNAGQVVEFDFGDIGASLFSQAGAGNRPQGVMPQTKTIAI 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220 241 KCTNVEANAMLTMRVEAEKVSDNVLVSDNPDVGFIIANESGAPLTPNNLTSKIPFRLDDSAQAQVGIRVWPVSVTGNKPA 320
Cdd:PRK15199 241 KCTNVAAQAYLTMRLEAEKVSGQAMVSDNPDLGFIVADQNGTPLTPNNLNSKIPFRLDDAAAANVGIRAWPISITGQKPT 320

                        330
                 ....*....|....*
gi 697052220 321 EGRFTSRGYLRVDYD 335
Cdd:PRK15199 321 EGPFTARGYLRVDYD 335
PRK15189 PRK15189
fimbrial protein BcfD; Provisional
 20-335 4.08e-87

fimbrial protein BcfD; Provisional


Pssm-ID: 185111 [Multi-domain]  Cd Length: 335  Bit Score: 265.44  E-value: 4.08e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220  20 ALATVCVNEKGVPTEVHYDLTDKFNSSNNQIGQVVTLsEKSQWVGVNAVCPKGT-TGNTTKRSYVTDYPVTGTSDGYQYL 98
Cdd:PRK15189  19 AFADVCKNVNGVPSSINYDLTTTLTAEQNQVGKTVQL-EKSQEVNVQAVCPAGAsTYSQTYRSYVSPYPVVETSGNWKYL 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220  99 KLN-DYLDGAMKITDSYAGVFYPPKSYIQMGSHPNVSKNKPFGVQDSSLVFRLKVTRRFINMVVIPRATMFRVYVTTTSS 177
Cdd:PRK15189  98 KLDpDYLEGGMRIEDSSAGDIYPPMNNVLMGYDENVKAGQPFYVRDSNLEFQLKIVKPFVGTVNISPKTMFNVYVMTAAG 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220 178 DPLTTPVYTISYSGTIQVPQSCAINAGNVVEFDFGDIGASLFSKAgvGNKPEGVSSQSKTIAIKCTNVEANAMLTMRVEA 257
Cdd:PRK15189 178 DPLTDVVYSILYSGTVTVPQSCEINAGQTILVNFGALYSGNFNHA--GQKPEGVRAKKFSVPVKCSGLDSQVNLTMRLIA 255

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220 258 EKVSD--NVLVSDNPDVGFIIANESGAPLTPNNLTSKIPFRLDDSAQAQVGIRVWPVSVTGNKPAEGRFTSRGYLRVDYD 335
Cdd:PRK15189 256 TPDSHvpQAIASDNADVGVVVETDEGNALIPNDVQSVAPFITDSAGRANITLQAYPVSTTGETPAEGAFTALASLRVDFD 335
PRK15206 PRK15206
long polar fimbrial protein LpfD; Provisional
 69-333 3.81e-23

long polar fimbrial protein LpfD; Provisional


Pssm-ID: 237924 [Multi-domain]  Cd Length: 359  Bit Score: 98.50  E-value: 3.81e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220  69 CP-KGTTGNTTKRSYVTDYPVTGTSDGYQYLKLNDYLDGAMKI-----TDSYAGVFYPPKSYI---QMGSHPNVSKNKPF 139
Cdd:PRK15206  78 CPdDTSLINDTYFKAVVPLAFVTNIESRSYYQINNNIAIASDVlvsggRGEYVNTPFENVGNLtanRSQCTQNASSKDAI 157

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220 140 GVQDSSLVFRLKVTRRFINMVVIPRATMFRVYVTTTSSDPLTTPVYTISYSGTIQVPQSCAINAGNVVEFDFGDIGASLF 219
Cdd:PRK15206 158 WTTGGKGHLSLYILHPFVGESIIPSTKIMDLFGTKKPSVYNSIPAASVYISGSITVPQGCELSSGSTLEIPFGEFKATDF 237

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220 220 sKAGVGNKPEGVSSQSKTIAIKCTNVEANAMLTMRVEAEKVSD--NVLVSDNPDVGFIIANESGAPLTPNNLTSKIPFRL 297
Cdd:PRK15206 238 -KDRKGQVAKNATKFTKELQFKCTNISDGVKIFLRIEGMPNANdsNAIDMGNPDIGAVIEGANGKILVPNDASVNQELSV 316

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 697052220 298 -----DDSAQAQVGIRVWPVSVTGNKPAEGRFTSRGYLRVD 333
Cdd:PRK15206 317 sglvdDTHRTASTTISAYPISTTGKLPAAGDFEGIATMRID 357
Fimbrial pfam00419
Fimbrial protein;
187-335 5.96e-20

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 84.79  E-value: 5.96e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220  187 ISYSGTI-QVPQSCAINAGNVVEFDFGDIGASLFSKAGVGNkpegvSSQSKTIAIKCTNVEANAMLTMRVEAEK--VSDN 263
Cdd:pfam00419   1 INFTGTVtRVPATCKITAGTPIEVDFGQIPVNELNAGGEGS-----RQKPFSITLECSSGSSAVKVTVGLFGTAdaSSPN 75

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 697052220  264 VLVSDN-----PDVGFIIANESGAPLTPNNLTSKIPFRLDDSAQAQVGIRVWPVSVTGNKPAEGRFTSRGYLRVDYD 335
Cdd:pfam00419  76 LLLTGNgagaaTGVGIRLYDANGGALPPNNGTSSIPVSATAAVATGITFTASLVATTGGTPTAGDFNATATIVVDYQ 152
PRK15297 PRK15297
fimbrial protein;
149-332 1.42e-14

fimbrial protein;


Pssm-ID: 185197 [Multi-domain]  Cd Length: 359  Bit Score: 73.61  E-value: 1.42e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220 149 RLKVTRRFINMVVIPRATMFRVYVTTT---SSD---PLTTPVYTISYSGTIQVPQSCAINAGNVVEFDFGDIGASLFSKA 222
Cdd:PRK15297 169 RIYITHPLVGEITIPETTIMNLYLSKTpgsSGDnipPSVPPMAHVTMSGTITVPQSCSINAGQVIEVRLPDIEGKDIRHL 248

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220 223 GVGNKPEGVSSQsktIAIKCTNVEANAMLTMRVEAEKVSDN--VLVSDNPDVGFIIANESGAPLTPNNlTSKIPFRLDDS 300
Cdd:PRK15297 249 GDSPQNSHVTTQ---VNFTCSNVADGTNLSMSLNGATDPHNpdYLKTDNENLGIRISDKYDNTIVPGG-SAELPIEDYTD 324

                        170       180       190
                 ....*....|....*....|....*....|..
gi 697052220 301 AQAQVGIRVWPVSVTGNKPAEGRFTSRGYLRV 332
Cdd:PRK15297 325 GKGSTEFTAAPVNTTGHVPHTGEYQATATLEI 356
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
176-335 3.17e-14

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 69.68  E-value: 3.17e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220 176 SSDPLTTPVYTISYSGTIqVPQSCAINAGNV-VEFDFGDIGASLFSKAGvgnkpEGVSSQSKTIAIK-CTNVEANAmLTM 253
Cdd:COG3539   15 SAAAAAAADGTVNFTGTV-VAPTCTINTGSKdQTVDLGTVSTSDLNGVG-----STSGPKPFSIKLTnCDAGTSNS-VKV 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220 254 RVEAEKVSD------NVLVSDNPDVGFIIANESGAPLTPNNLTSKIPfrLDDSAQAQVGIRVWPVSvTGNKPAEGRFTSR 327
Cdd:COG3539   88 TFTGTADSAnpgllaNTGSGGASGVGIQLLDSDGTPIPLGTPSSAVT--LTSNGSATLPFYARYVA-TGATVTAGSFNAT 164


                 ....*...
gi 697052220 328 GYLRVDYD 335
Cdd:COG3539  165 ATFTIDYQ 172
PRK15291 PRK15291
fimbrial protein StgD; Provisional
 26-326 3.12e-12

fimbrial protein StgD; Provisional


Pssm-ID: 185191 [Multi-domain]  Cd Length: 355  Bit Score: 66.69  E-value: 3.12e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220  26 VNEKGVPTEVhydltdkfNSSNNQIGQVVTL-SEKSQWVGVNAVCPKGTTGNTTKRSYVTDYPVTGTSDGYQYLKLNDYL 104
Cdd:PRK15291  40 LNDARIPAEK--------NKAGTEVRDLETLtSSESYKVGCSCLTHFSSTFREVYYTARSPLSIDTTRNGYTYYTLNDNL 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220 105 DGAMKITDSYAGVFYPPksyiqMGSHPNVSKNKPFGVQD------------SSLVFRLKVTRRFINMVVIPRATMFRVY- 171
Cdd:PRK15291 112 SIATSIAVLGRGFIAVP-----FEAEPNVVKDGMNCYTDtvegnlatlytgSEVKVSFLINKPFVGQVAIPGTIVANLYg 186

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220 172 -VTTTSSDPLTTPVYTISYSGTIQVPQSCAINAGNVVEFDFGDIGASLFS----KAGVGNKpegvssQSKTIAIKCTNVE 246
Cdd:PRK15291 187 gLDASSSTASTDKLAEVRIVGDIVAPQSCEIDSGQVIEVNFGKIPVADFSttqgTAAAGHK------VTKTVQVKCTGML 260

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220 247 ANAMLTMRVEAEKV--SDNVL-VSDNPDVGFIIAN--ESGAPLTPNNLTSKIPFRLDDSAQAQVGIRVWPVSVTGNKPAE 321
Cdd:PRK15291 261 DENIVYSTFNADPVdsSANMMkVLGNDDVGIMIYDkwDRMVKVTGGKMDMDMGVNNGGAETNSLTFSAAPASATGARPQP 340


                 ....*
gi 697052220 322 GRFTS 326
Cdd:PRK15291 341 GTFEA 345
PRK15276 PRK15276
putative fimbrial subunit SteE; Provisional
 187-334 2.99e-04

putative fimbrial subunit SteE; Provisional


Pssm-ID: 185179  Cd Length: 153  Bit Score: 40.86  E-value: 2.99e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052220 187 ISYSGTIQVPQSCAINAGNVVEFDFGDIgaslfskagVGNKPEGVSSQSKT-IAIKCTNVEANAMLTMRVE----AEKVS 261
Cdd:PRK15276  17 LTFHGKLINPPACTINNGETLEVSFGSV---------IIDNIDGVNYLTEIpWTLTCDSSFRDDALTFTLSylgtATPYS 87

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 697052220 262 DNVLVSDNPDVGfIIANESGAPLTPNNltskiPFRLDDSAQAQvgIRVWPVSVTGNKPAEGRFTSRGYLRVDY 334
Cdd:PRK15276  88 AKALTTNVPELG-IELQQNGTVFPPGT-----SLTINESSLPT--LKAVPVKQPGKEPAEGDFEAFATLQVDY 152
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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