NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|697052236|ref|WP_033144842|]
View 

MULTISPECIES: fimbrial protein [Enterobacter]

Protein Classification

fimbrial protein( domain architecture ID 10007530)

fimbrial protein similar to Escherichia coli fimbrial adapter PapF, which is required for the correct presentation of the PapG adhesin at the distal end of the tip fibrillum

Gene Ontology:  GO:0009289|GO:0007155
PubMed:  1670938|22411982|2890081

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
1-181 3.84e-37

Pilin (type 1 fimbrial protein) [Cell motility];


:

Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 126.31  E-value: 3.84e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236   1 MKKHMLAVVMASIMAsatcaqaASTTTVNGGNIKFMGSVVDAPCAVALESEDQVVHIDQITLKSLGAKDAVSGqSKPFYV 80
Cdd:COG3539    1 MKKLLLALLLALALS-------AAAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSG-PKPFSI 72

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236  81 TLTNCDVSTYTNAAISFSGQSDAITAGALANTaGSGGATGVALRLFGPDGKAMDVNSGTASDTIPlSKGDNTIPMSVDYL 160
Cdd:COG3539   73 KLTNCDAGTSNSVKVTFTGTADSANPGLLANT-GSGGASGVGIQLLDSDGTPIPLGTPSSAVTLT-SNGSATLPFYARYV 150

                        170       180
                 ....*....|....*....|.
gi 697052236 161 TTGDKPTAGAVEAVATFQIIY 181
Cdd:COG3539  151 ATGATVTAGSFNATATFTIDY 171
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
1-181 3.84e-37

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 126.31  E-value: 3.84e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236   1 MKKHMLAVVMASIMAsatcaqaASTTTVNGGNIKFMGSVVDAPCAVALESEDQVVHIDQITLKSLGAKDAVSGqSKPFYV 80
Cdd:COG3539    1 MKKLLLALLLALALS-------AAAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSG-PKPFSI 72

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236  81 TLTNCDVSTYTNAAISFSGQSDAITAGALANTaGSGGATGVALRLFGPDGKAMDVNSGTASDTIPlSKGDNTIPMSVDYL 160
Cdd:COG3539   73 KLTNCDAGTSNSVKVTFTGTADSANPGLLANT-GSGGASGVGIQLLDSDGTPIPLGTPSSAVTLT-SNGSATLPFYARYV 150

                        170       180
                 ....*....|....*....|.
gi 697052236 161 TTGDKPTAGAVEAVATFQIIY 181
Cdd:COG3539  151 ATGATVTAGSFNATATFTIDY 171
PRK15187 PRK15187
fimbrial protein BcfA; Provisional
 1-182 2.85e-35

fimbrial protein BcfA; Provisional


Pssm-ID: 185109  Cd Length: 180  Bit Score: 121.85  E-value: 2.85e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236   1 MKKHMLAVVMASIMASATCAQA-ASTTTVNGGNIKFMGSVVDAPCAVALESEDQVVHIDQITLKSLGAKDAVSGQSKPFY 79
Cdd:PRK15187   1 MKKPVLALMVSAIAFGGMLSTAqADTTTVTGGTVNFVGQVVDAACSVSADSVDQTVTLGQVRASKLTEAGMVANQKEDFT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236  80 VTLTNCDVSTYTNAAISFSGQSDAITAGALANTAGSGGATGVALRLFGPDGKAMDVnsGTASDTIPLSKGDNTIPMSVDY 159
Cdd:PRK15187  81 IKLEDCDTQTSQNAAVIFNGQQDANQPGSLANTAGAGSATNVALQLYGPDGQALNI--GESSSTVTLNDGENVIPLSVDY 158

                        170       180
                 ....*....|....*....|...
gi 697052236 160 LTTGdKPTAGAVEAVATFQIIYS 182
Cdd:PRK15187 159 IATG-TATAGNVTATATFSMVYS 180
Fimbrial pfam00419
Fimbrial protein;
32-181 4.57e-13

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 63.22  E-value: 4.57e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236   32 NIKFMGSVVDAPCAVALESEDQVVhIDQITLKSLGAKDAVSGQsKPFYVTLtNCD-VSTYTNAAISFSGQSDAITAGALA 110
Cdd:pfam00419   2 NFTGTVTRVPATCKITAGTPIEVD-FGQIPVNELNAGGEGSRQ-KPFSITL-ECSsGSSAVKVTVGLFGTADASSPNLLL 78

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 697052236  111 NTAGSGGATGVALRLFGPDGKAMDVNSGTASDTIPLSKG-DNTIPMSVDYL-TTGDKPTAGAVEAVATFQIIY 181
Cdd:pfam00419  79 TGNGAGAATGVGIRLYDANGGALPPNNGTSSIPVSATAAvATGITFTASLVaTTGGTPTAGDFNATATIVVDY 151
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
1-181 3.84e-37

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 126.31  E-value: 3.84e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236   1 MKKHMLAVVMASIMAsatcaqaASTTTVNGGNIKFMGSVVDAPCAVALESEDQVVHIDQITLKSLGAKDAVSGqSKPFYV 80
Cdd:COG3539    1 MKKLLLALLLALALS-------AAAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSG-PKPFSI 72

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236  81 TLTNCDVSTYTNAAISFSGQSDAITAGALANTaGSGGATGVALRLFGPDGKAMDVNSGTASDTIPlSKGDNTIPMSVDYL 160
Cdd:COG3539   73 KLTNCDAGTSNSVKVTFTGTADSANPGLLANT-GSGGASGVGIQLLDSDGTPIPLGTPSSAVTLT-SNGSATLPFYARYV 150

                        170       180
                 ....*....|....*....|.
gi 697052236 161 TTGDKPTAGAVEAVATFQIIY 181
Cdd:COG3539  151 ATGATVTAGSFNATATFTIDY 171
PRK15187 PRK15187
fimbrial protein BcfA; Provisional
 1-182 2.85e-35

fimbrial protein BcfA; Provisional


Pssm-ID: 185109  Cd Length: 180  Bit Score: 121.85  E-value: 2.85e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236   1 MKKHMLAVVMASIMASATCAQA-ASTTTVNGGNIKFMGSVVDAPCAVALESEDQVVHIDQITLKSLGAKDAVSGQSKPFY 79
Cdd:PRK15187   1 MKKPVLALMVSAIAFGGMLSTAqADTTTVTGGTVNFVGQVVDAACSVSADSVDQTVTLGQVRASKLTEAGMVANQKEDFT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236  80 VTLTNCDVSTYTNAAISFSGQSDAITAGALANTAGSGGATGVALRLFGPDGKAMDVnsGTASDTIPLSKGDNTIPMSVDY 159
Cdd:PRK15187  81 IKLEDCDTQTSQNAAVIFNGQQDANQPGSLANTAGAGSATNVALQLYGPDGQALNI--GESSSTVTLNDGENVIPLSVDY 158

                        170       180
                 ....*....|....*....|...
gi 697052236 160 LTTGdKPTAGAVEAVATFQIIYS 182
Cdd:PRK15187 159 IATG-TATAGNVTATATFSMVYS 180
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
1-181 1.35e-20

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 83.85  E-value: 1.35e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236   1 MKKHMLAVVMASIMASATCAQAASTTT--VNGGNIKFMGSVVDAPCAVALESEDQVVHIDQITLKSLGAKDAVSGQSkPF 78
Cdd:PRK15194   1 MKLRFISSAIASLLFVAGAAYAADPTPvsVDGGTIHFEGELVNAACSVNTDSADQTVTLGQYRTAIFTAVGNTTALI-PF 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236  79 YVTLTNCDVSTYTNAAISFSGQSDAITAGALANTAGSGG--ATGVALRLFGPDGKAMDVNSGTASDTIPLSKGDNTIPMS 156
Cdd:PRK15194  80 TIQLNDCDPVVAATAAVAFSGQADATNDNLLAVASSTNTttATGVGIEILDNTSSILKPDGATFSANQNLIEGTNTLHFS 159

                        170       180
                 ....*....|....*....|....*
gi 697052236 157 VDYLTTGDKPTAGAVEAVATFQIIY 181
Cdd:PRK15194 160 ARYKATGTSASAGQANADATFIMKY 184
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 1-181 4.00e-20

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 82.33  E-value: 4.00e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236   1 MKKHMLAvvMASIMASATCAQAASTttvNGGNIKFMGSVVDAPCAVALESEDQVVHIDQITlKSLGAKDAVSGQSKPFYV 80
Cdd:PRK15209   1 MKKVVFA--LSALALTSTSVFAAES---GDGTVKFTGEIVDAPCVVSTDSQNQEVVLGQVK-KSVFKAIGDKSSAKPFQI 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236  81 TLTNCDVSTYTNAAISFSGQSDAITAGALANTAGSGGATGVALRLFGPDGKAMDVNSGTASDTipLSKGDNTIPMSVDYL 160
Cdd:PRK15209  75 KLEDCDITTNKKVNVSFNGVGDADDSTLVSVSTEAGAATGVGIGIYDNANTLVELNTGKSTTT--LAAGQTVLYFTANYV 152

                        170       180
                 ....*....|....*....|.
gi 697052236 161 TTGDKPTAGAVEAVATFQIIY 181
Cdd:PRK15209 153 STKDTVTTGYGNAEVDFNLSY 173
Fimbrial pfam00419
Fimbrial protein;
32-181 4.57e-13

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 63.22  E-value: 4.57e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236   32 NIKFMGSVVDAPCAVALESEDQVVhIDQITLKSLGAKDAVSGQsKPFYVTLtNCD-VSTYTNAAISFSGQSDAITAGALA 110
Cdd:pfam00419   2 NFTGTVTRVPATCKITAGTPIEVD-FGQIPVNELNAGGEGSRQ-KPFSITL-ECSsGSSAVKVTVGLFGTADASSPNLLL 78

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 697052236  111 NTAGSGGATGVALRLFGPDGKAMDVNSGTASDTIPLSKG-DNTIPMSVDYL-TTGDKPTAGAVEAVATFQIIY 181
Cdd:pfam00419  79 TGNGAGAATGVGIRLYDANGGALPPNNGTSSIPVSATAAvATGITFTASLVaTTGGTPTAGDFNATATIVVDY 151
PRK15200 PRK15200
type 1 fimbrial protein subunit FimI;
23-181 5.88e-11

type 1 fimbrial protein subunit FimI;


Pssm-ID: 185122  Cd Length: 177  Bit Score: 58.33  E-value: 5.88e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236  23 ASTTTVNGGNIKFMGSVVDAPCAVALESEDQVVHIDQITLKSLGAKDAVSGQSKPFYVTLTNCDVSTYTNAAISFSGQSD 102
Cdd:PRK15200  19 AQPVMVESGRVHLRGQLVNGGCAVATESQDLRVLMGQYRTNAFTGPGSFAPVSVPFSLRLISCSAEVWRHVGIAFAGVTP 98

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 697052236 103 AITAGALANTAGSGGATGVALRLFGPDGKAMDVNSgTASDTIPLSKGDNTIPMSVDYLTTGDKPTAGAVEAVATFQIIY 181
Cdd:PRK15200  99 AEDPHVFLASGEGIGNAGIGLALFDDQQRQIIPNT-LPLHYAPILTSEMTLHFTARYRAISENMTPGRIHSEVWFTLVY 176
PRK15210 PRK15210
fimbrial protein;
3-181 1.10e-09

fimbrial protein;


Pssm-ID: 185132  Cd Length: 194  Bit Score: 55.09  E-value: 1.10e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236   3 KHMLAVVMASIMASATCAQAASTTTVN---GGNIKFMGSVVDAPCAVALESEDQVVHIDQITLKSLGAKDAVSgQSKPFY 79
Cdd:PRK15210   4 KIILAMAAAGMMYGASVFAADTTPTAGpfgSGKILFTGTITNSPCDIAPGDDAITVPFGQISYRKLNTADATT-ESKPFT 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236  80 VTLTNC----DVSTYTNAA-------ISFSGQSDaiTAGALANTAGSGGATGVALrLFGPDGKAMDVNSGTAS-DTIPLS 147
Cdd:PRK15210  83 IHLQNCafdpNIPDTAGSAgkmskvtVSFSGTAN--TSKKAYTTSGSAQHVGVQL-LKSDNTSIIEPNTPMPDgDAQQLQ 159

                        170       180       190
                 ....*....|....*....|....*....|....
gi 697052236 148 KGDNTIPMSVDYLTTGDKPTAGAVEAVATFQIIY 181
Cdd:PRK15210 160 AGNNELNFFARLIALDNGVTPGDFNASVTYTLKY 193
lpfA PRK15289
fimbrial protein; Provisional
 1-181 1.56e-09

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 54.58  E-value: 1.56e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236   1 MKKHML--AVVMASIMAsATCAQAAStttvngGNIKFMGSVVDAPCAVALESEDQVVHIDQITLKSLGAKDAVSGQSKpF 78
Cdd:PRK15289   1 MKRNIIggAFTLASLML-AGHALAED------GVVHFVGEIVDTTCEVTSDTADQIVPLGKVSKNAFSGVGSLASPQK-F 72

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236  79 YVTLTNCDvSTYTNAAISFSGQSDA-----------ITAGALANTAGSG---GATGVALRLFG-PDGKAMDVNSGTASDT 143
Cdd:PRK15289  73 SIKLENCP-ATYTQAAVRFDGTEAPggdgdlkvgtpLTAGNPGDFTGTGqaiAATGVGIRIFNqSDNSQVKLYNDSAYTA 151

                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 697052236 144 IPlSKGDNTIPMSVDYLTTGDKPTAGAVEAVATFQIIY 181
Cdd:PRK15289 152 ID-AEGKAEMKFIARYVATNATVTAGTANADSQFTVEY 188
PRK09733 PRK09733
fimbrial-like protein;
1-181 3.68e-09

fimbrial-like protein;


Pssm-ID: 182053  Cd Length: 181  Bit Score: 53.41  E-value: 3.68e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236   1 MKKHMLAVVMASIMASATCAQAAStttvngGNIKFMGSVVDAPCAVALESEDQVVHIDQITLKSLgaKDAVSGQSKPFYV 80
Cdd:PRK09733   2 FKKSLLVAGVAMILSNNVFADEGH------GIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVL--KSDQKSLAEPFTI 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236  81 TLTNCDVS----TYTNAAISFSGQS-DAITAGALANTAGS--GGATGVALRLFgpDGKAMDVNSGTASD-TIPLSKGDNT 152
Cdd:PRK09733  74 HLQDCMLSqggtTYSKAKVTFTTANtMTGQSDLLKNTKETeiGGATGVGVRIL--DSQSGEVTLGTPVViTFNNTNSYQE 151

                        170       180
                 ....*....|....*....|....*....
gi 697052236 153 IPMSVDYLTTGDKPTAGAVEAVATFQIIY 181
Cdd:PRK09733 152 LNFKARMESPSKDATPGNVYAQADYKIAY 180
PRK15261 PRK15261
fimbrial protein SteA; Provisional
 6-125 1.26e-08

fimbrial protein SteA; Provisional


Pssm-ID: 185169  Cd Length: 195  Bit Score: 52.09  E-value: 1.26e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236   6 LAVVMASIMASATCAQAASTTTvngGNIKFMGSVVDAPCAVALESEDQVVHI-DQITLKSLGAKDAVSGQSKPFYVTLTN 84
Cdd:PRK15261   9 LAVTASLVMGIVSGAQAAGSNT---AKVTFLGNIVDSPCSVTLDTEDQTVNMgSSIGNGTLSNGKTTINNARTFHIDLEG 85

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 697052236  85 CDVSTYTNAAISFSGQSDAITAG------ALANTAGSGGATGVALRL 125
Cdd:PRK15261  86 CTWATEKNMNVVFTTGSGTTAATgatdnlALMKTDGTGAISNVSLAI 132
PRK15190 PRK15190
fimbrial protein BcfE; Provisional
 13-181 1.36e-08

fimbrial protein BcfE; Provisional


Pssm-ID: 185112  Cd Length: 181  Bit Score: 52.01  E-value: 1.36e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236  13 IMASATCAQAASTTTVNGGNIKFMGSVVDAPCAVALESEDQVVHIDQITLKSLGAKDAVSgQSKPFYVTLTNCDVSTyTN 92
Cdd:PRK15190  10 AMGLMLCPQINASADDLAYNLEFTGTIVAQTCDIDISSLSQSIDLGQFAVGDFPSTGTTT-KFKPFNINLKNCSRGI-AG 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236  93 AAISFSGQSDAITAGALANT---AGSGG--ATGVALRLFGPDGKAMDVNSgTASDTIPLSKGDNTIPMSVDYLTTGDKPT 167
Cdd:PRK15190  88 AKIWFTGEPDPDNPALLAITdtgMGSGNmlASGVGVEILNDDQDTISINN-ADSVVYPLKAGRNTLSFYIRYKSTRPTVT 166

                        170
                 ....*....|....
gi 697052236 168 AGAVEAVATFQIIY 181
Cdd:PRK15190 167 SGNATAVMYFDMQY 180
PRK15293 PRK15293
fimbrial protein SthD;
7-181 3.02e-08

fimbrial protein SthD;


Pssm-ID: 185193  Cd Length: 185  Bit Score: 51.21  E-value: 3.02e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236   7 AVVMASIMASATCAQAASTTTVNGGNIKFMGSVVDAPCAVALESEDQVVHIDQITLKSLGAKDAvsgqSKPFYVTLTNCD 86
Cdd:PRK15293  11 ALLTFTGLALWSPSISAAYNTADAVDINVTGLIYADPCTVTVPDTLSLGQYARADIAVAGGNTA----TIPFTIKMTNCP 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236  87 VSTyTNAAISFSGQ--SDAITAGALANTAGSGGATGVALRLFGPDGKAMDVNSGTASDTIPLSKGDNT--IPMSVDYLTT 162
Cdd:PRK15293  87 ATT-TKAAISFNGVpyPDPNYASAIYANSAANPAQDLGLQLFNLDGKSLVNLANNVTYTVDINSNTHEanLPVAARMYTP 165

                        170
                 ....*....|....*....
gi 697052236 163 GDKPTAGAVEAVATFQIIY 181
Cdd:PRK15293 166 YGKVTAGDFTSVVTITIAW 184
PRK15300 PRK15300
fimbrial protein StiA; Provisional
 10-182 8.84e-08

fimbrial protein StiA; Provisional


Pssm-ID: 185200  Cd Length: 179  Bit Score: 49.71  E-value: 8.84e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236  10 MASIMASATCAQAASTTTVNGGNIKFMGSVVDAPCAVALESEDQVVhidQITLKSLGAKDAVSGQSKPFYVTLTNCDVST 89
Cdd:PRK15300   8 LTVALAAITLSPAALADTAKDGTVHITGLIKQNACTVKTDSVEVTL---QEEFASLFTAAGQTAGDTDFTIELENCDANV 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236  90 YTNAAISFSGQSDAITAGALANtagSGGATGVALRLFGPDGKAM---DVNSGTASDTIPLSKGDNTI--PMSVDYLTTGD 164
Cdd:PRK15300  85 YSSVQARFEGTLDGTDATILKN---EDDAENIGVQILDKTSTPMtfnDLQAWSAAVALPTAEGVTELsmPFTARYIATAV 161

                        170
                 ....*....|....*...
gi 697052236 165 KPTAGAVEAVATFQIIYS 182
Cdd:PRK15300 162 PVKSGTVDATATFYLQYN 179
PRK09934 PRK09934
fimbriae assembly protein;
1-181 1.07e-07

fimbriae assembly protein;


Pssm-ID: 182153 [Multi-domain]  Cd Length: 171  Bit Score: 49.12  E-value: 1.07e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236   1 MKKHMLAVVMaSIMASATCAQAASTTTVNggnIKFMGSVVDAPCAVALESEDQVVHIDQITLKSLGAKDAVSgQSKPFYV 80
Cdd:PRK09934   1 MRRVFFACFC-GLLWSPLSWAADPLGEIN---IELHGNVVDFTCTVNTADSDKTVDLGTWPTKQLLNAGDTT-QPVPFSL 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236  81 TLTNCDVSTytnAAISFSGqSDAITAGALA-NTAGSGGATGVALRlfgpDGKAMDVNSGTASDTIPL-SKGDNTIPMSVD 158
Cdd:PRK09934  76 KLEGCPPGS---ASITFTG-TPASDTNLLAlDDPAMAQTVAIEIR----DSDRSRLALGQASPTVEVdANGNATLNFYAN 147

                        170       180
                 ....*....|....*....|...
gi 697052236 159 YLTTGDKPTAGAVEAVATFQIIY 181
Cdd:PRK09934 148 YIALADGVQPGVAKADATFMINY 170
PRK15191 PRK15191
fimbrial protein BcfF; Provisional
 22-181 3.50e-07

fimbrial protein BcfF; Provisional


Pssm-ID: 185113 [Multi-domain]  Cd Length: 172  Bit Score: 47.79  E-value: 3.50e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236  22 AASTTTVNGGNIKFMGSVVDAPCAVALESEDQVVHIDQITLKSL-GAKDAVSGQskPFYVTLTNCDvSTYTNAAISFSGQ 100
Cdd:PRK15191  14 AASGVQAHDGRVYVSGTITDNTCSLSPGSENINVAMGAVSQRQFyRAGDGSAWQ--PFAIDLQNCG-STASGVTVSFSGA 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236 101 SDAITAGALANTAGSGGATGVALRLFgpDGKAMDVNSGTASDTIPLSKGDNT--IPMSVDYLTTGDKPTAGAVEAVATFQ 178
Cdd:PRK15191  91 ADSRNTDLLALTAGESDASGIGIALY--DQNKTLIPLGQESDVVTLSPGQASahLQFYARYLADGGAVTPGDANASATFI 168


                 ...
gi 697052236 179 IIY 181
Cdd:PRK15191 169 LAY 171
PRK15296 PRK15296
fimbrial protein SthA;
17-181 4.28e-05

fimbrial protein SthA;


Pssm-ID: 185196  Cd Length: 181  Bit Score: 42.00  E-value: 4.28e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236  17 ATCAQAASTTTVNGGNIKFMGSVVDAPCAVALE-SEDQVVHIDQiTLKSLGAKDAVSGQSKPFYVTLTNC---DVSTYTN 92
Cdd:PRK15296  10 AMLTAVASTPVFAQNTITFNGKIYDQACTVQVNgSTDTTIDLGN-YSKERIAEKGATTDYVPFTVSLVSCpeaGTGVPTQ 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236  93 AAISFSGQSDAITAGALAN--TAGSGGATGVALRLFGPDGKAMDVNSGTASDTIPLSKGDNTIPMSVDYLTTGDKP-TAG 169
Cdd:PRK15296  89 AMFRFHGATDDSNPTYFKNadEGSETGAAGVGISIQNASHSDVTDNTDDAAVNLPTDGSTADFTYYAAMANDGSATvTGG 168

                        170
                 ....*....|..
gi 697052236 170 AVEAVATFQIIY 181
Cdd:PRK15296 169 DVSTQVTYTVSY 180
PRK15205 PRK15205
long polar fimbrial protein LpfE; Provisional
 1-181 3.43e-04

long polar fimbrial protein LpfE; Provisional


Pssm-ID: 237923  Cd Length: 176  Bit Score: 39.45  E-value: 3.43e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236   1 MKKHMLAVVMASIMAsatCAQAASTTTVNGGNIKFMGSVVDAPCAvaLESEDQVVHIDQITLKSLGAKDAVSGQsKPFYV 80
Cdd:PRK15205   3 NKRALLPLALLLLTA---SGMAAPTDLGPAGDIHFTITIKAKACE--LEKDSLEVDMGTMVLQKPVKVGTELNQ-KNFSI 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236  81 TLTNCDvsTYTNAAISFSGQSDAITAGALANTAGsgGATGVALRLFGPDGKAM--DVNSGTASDTIPLSKGDNTIPMSVD 158
Cdd:PRK15205  77 GLKDCD--GISKASVTMDGSPDPDDPSLFALDAG--GATGVALKIKTSKGTQQypKSTDGTPVEWAINGDGTTQLNYIAS 152

                        170       180
                 ....*....|....*....|...
gi 697052236 159 YLTTGDKPTAGAVEAVATFQIIY 181
Cdd:PRK15205 153 YVPVNADATVGTANATVNFSVTY 175
PRK15283 PRK15283
fimbrial major subunit StfA;
7-117 5.76e-04

fimbrial major subunit StfA;


Pssm-ID: 185183  Cd Length: 186  Bit Score: 38.98  E-value: 5.76e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236   7 AVVMASIMASATCAQAASTTTvngGNIKFMGSVVDAPCAVALESEDQVVHIDQITLKSL-GAKDAvsgQSKPFYVTLTNC 85
Cdd:PRK15283   8 AVAAALVMGVSSFANAAGSNT---GTVTFTGTIEDSPCSIVVGDEHQTVNLGHIGTGSLmGGKES---SKVDFHIGLENC 81

                         90       100       110
                 ....*....|....*....|....*....|....
gi 697052236  86 DVSTYTNAAISFS--GQSDAITAGALANTAGSGG 117
Cdd:PRK15283  82 AFTTEKEASTVFSaiGNESSANPGSVALMRIGGG 115
PRK15288 PRK15288
putative minor fimbrial subunit StfG; Provisional
 32-180 9.70e-04

putative minor fimbrial subunit StfG; Provisional


Pssm-ID: 185188 [Multi-domain]  Cd Length: 176  Bit Score: 38.09  E-value: 9.70e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052236  32 NIKFMGSVVDAPCAVALESEDqvvhIDQITLKSLGAKDAV-SGQS--KPFYVTLTNCDVSTYTNAAISFSGQSDAITAGA 108
Cdd:PRK15288  28 NLHFSGSLVASPCTLTMQGTG----IAEVDFSSLDSSDFTpDGQSarKPLVFELTDCDSALSNGVQVTFTGTEATGMRGI 103

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 697052236 109 LANTAGSgGATGVALRLFGPDGKAMDVNSGTASdTIPLSKGDNTIPMS--VDYLTTGDK-PTAGAVEAVATFQII 180
Cdd:PRK15288 104 LAIDSYS-GASGIGIGIETLSGVPVGMNDEEGA-IFTLVTGKNTLSLNawVQRLPGEDLiPGRFSASALATFEYL 176
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH