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Conserved domains on  [gi|727165342|ref|WP_033636150|]
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MULTISPECIES: DUF4312 family protein [Serratia]

Protein Classification

DUF4312 family protein( domain architecture ID 10624538)

DUF4312 family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4312 pfam14189
Domain of unknown function (DUF4312); This family of proteins is functionally uncharacterized. ...
 5-88 1.69e-36

Domain of unknown function (DUF4312); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 99 and 118 amino acids in length.


:

Pssm-ID: 433760  Cd Length: 84  Bit Score: 118.55  E-value: 1.69e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727165342   5 YTTSVKVEGKGDSKAKAFASALANVQGAVLKSTNNILLRIEPQDVSVVRAEEKITKEKFLFFFLPRERKSYAVSLEITVN 84
Cdd:pfam14189  1 FTTTVRVSGKGDTKEEAFASALSQVQKTVLKDTNGVVLRIEPVDVKVVSAEEEVYTEKFLFFFLPRKRREYDVELDITVE 80


                 ....
gi 727165342  85 VTII 88
Cdd:pfam14189 81 VTWI 84
 
Name Accession Description Interval E-value
DUF4312 pfam14189
Domain of unknown function (DUF4312); This family of proteins is functionally uncharacterized. ...
 5-88 1.69e-36

Domain of unknown function (DUF4312); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 99 and 118 amino acids in length.


Pssm-ID: 433760  Cd Length: 84  Bit Score: 118.55  E-value: 1.69e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727165342   5 YTTSVKVEGKGDSKAKAFASALANVQGAVLKSTNNILLRIEPQDVSVVRAEEKITKEKFLFFFLPRERKSYAVSLEITVN 84
Cdd:pfam14189  1 FTTTVRVSGKGDTKEEAFASALSQVQKTVLKDTNGVVLRIEPVDVKVVSAEEEVYTEKFLFFFLPRKRREYDVELDITVE 80


                 ....
gi 727165342  85 VTII 88
Cdd:pfam14189 81 VTWI 84
EF_0831 TIGR03578
conserved hypothetical protein EF_0831/AHA_3912; Members of this family of small (about 100 ...
 2-97 5.15e-36

conserved hypothetical protein EF_0831/AHA_3912; Members of this family of small (about 100 amino acid), relatively rare proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown. [Hypothetical proteins, Conserved]


Pssm-ID: 213831  Cd Length: 96  Bit Score: 117.51  E-value: 5.15e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727165342   2 KEQYTTSVKVEGKGDSKAKAFASALANVQGAVLKSTNNILLRIEPQDVSVVRAEEKITKEKFLFFFLPRERKSYAVSLEI 81
Cdd:TIGR03578  1 KKMITTTVIVSGKGNTKQLAFASALSKIQKKVMKENPAVLLRIEPVDVHILKAEESVYTEKFLFFFFPRKRREYSVELDV 80

                         90
                 ....*....|....*.
gi 727165342  82 TVNVTIINTEKVVFVT 97
Cdd:TIGR03578 81 TVKVTAIKVEEVDFKK 96
 
Name Accession Description Interval E-value
DUF4312 pfam14189
Domain of unknown function (DUF4312); This family of proteins is functionally uncharacterized. ...
 5-88 1.69e-36

Domain of unknown function (DUF4312); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 99 and 118 amino acids in length.


Pssm-ID: 433760  Cd Length: 84  Bit Score: 118.55  E-value: 1.69e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727165342   5 YTTSVKVEGKGDSKAKAFASALANVQGAVLKSTNNILLRIEPQDVSVVRAEEKITKEKFLFFFLPRERKSYAVSLEITVN 84
Cdd:pfam14189  1 FTTTVRVSGKGDTKEEAFASALSQVQKTVLKDTNGVVLRIEPVDVKVVSAEEEVYTEKFLFFFLPRKRREYDVELDITVE 80


                 ....
gi 727165342  85 VTII 88
Cdd:pfam14189 81 VTWI 84
EF_0831 TIGR03578
conserved hypothetical protein EF_0831/AHA_3912; Members of this family of small (about 100 ...
 2-97 5.15e-36

conserved hypothetical protein EF_0831/AHA_3912; Members of this family of small (about 100 amino acid), relatively rare proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown. [Hypothetical proteins, Conserved]


Pssm-ID: 213831  Cd Length: 96  Bit Score: 117.51  E-value: 5.15e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727165342   2 KEQYTTSVKVEGKGDSKAKAFASALANVQGAVLKSTNNILLRIEPQDVSVVRAEEKITKEKFLFFFLPRERKSYAVSLEI 81
Cdd:TIGR03578  1 KKMITTTVIVSGKGNTKQLAFASALSKIQKKVMKENPAVLLRIEPVDVHILKAEESVYTEKFLFFFFPRKRREYSVELDV 80

                         90
                 ....*....|....*.
gi 727165342  82 TVNVTIINTEKVVFVT 97
Cdd:TIGR03578 81 TVKVTAIKVEEVDFKK 96
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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