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Conserved domains on  [gi|727185884|ref|WP_033647757|]
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MULTISPECIES: flagellin FliC [Serratia]

Protein Classification

PRK06819 family protein( domain architecture ID 11482433)

PRK06819 family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK06819 PRK06819
FliC/FljB family flagellin;
1-413 7.50e-164

FliC/FljB family flagellin;


:

Pssm-ID: 235867 [Multi-domain]  Cd Length: 376  Bit Score: 465.02  E-value: 7.50e-164
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884   1 MAQVINTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQASRNANDGISLAQTTEG 80
Cdd:PRK06819   1 MAAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISIAQTTEG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884  81 ALNEVNDNLQNIRRLTVQSQNGSNSASDLQSIQDEISQRLSEINRISEQTDFNGVKVLSSDQKLTIQVGANDGETIDIEL 160
Cdd:PRK06819  81 ALNEINNNLQRVRELTVQAQNGSNSSSDLDSIQDEISQRLAEIDRVSDQTQFNGVKVLAEDTTMSIQVGANDGETIDINL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 161 KDINAKTLGLEKFSVA-DGIDTTKVGAKATNVQTGKDLTITNTTnkqANGAAPASFLKDNATGDIYAVGTDGKNYKATID 239
Cdd:PRK06819 161 QKIDSKSLGLGSFSVSgVSGALTSLTFTDTALDTSVTGVTTTTA---LDFSDISTFAKGATVHGIGDVGTDGAYADGYVI 237

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 240 KTSGDITAiaaaeTTGLTDTSATTTVKEEVaasgpdaanlhsydNGKSyviqeGTGADAKYFKASVDATGKVtkgaeqst 319
Cdd:PRK06819 238 RTTDGKQY-----KGEVDATNGKVTFADDA--------------NGDP-----ITDATKLEAAAQFSPAGKA-------- 285

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 320 epkTADPLATLDKALSQVDSLRSSLGAVQNRFDSVINNLNSTVNNLSASQSRIQDADYATEVSNMSRANILQQAGTSVLA 399
Cdd:PRK06819 286 ---TASPLETLDDALKQVDGLRSSLGAVQNRFESTVTNLNNTVTNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLA 362

                        410
                 ....*....|....
gi 727185884 400 QANQSTQNVLSLLR 413
Cdd:PRK06819 363 QANQVPQTVLSLLR 376
 
Name Accession Description Interval E-value
PRK06819 PRK06819
FliC/FljB family flagellin;
1-413 7.50e-164

FliC/FljB family flagellin;


Pssm-ID: 235867 [Multi-domain]  Cd Length: 376  Bit Score: 465.02  E-value: 7.50e-164
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884   1 MAQVINTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQASRNANDGISLAQTTEG 80
Cdd:PRK06819   1 MAAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISIAQTTEG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884  81 ALNEVNDNLQNIRRLTVQSQNGSNSASDLQSIQDEISQRLSEINRISEQTDFNGVKVLSSDQKLTIQVGANDGETIDIEL 160
Cdd:PRK06819  81 ALNEINNNLQRVRELTVQAQNGSNSSSDLDSIQDEISQRLAEIDRVSDQTQFNGVKVLAEDTTMSIQVGANDGETIDINL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 161 KDINAKTLGLEKFSVA-DGIDTTKVGAKATNVQTGKDLTITNTTnkqANGAAPASFLKDNATGDIYAVGTDGKNYKATID 239
Cdd:PRK06819 161 QKIDSKSLGLGSFSVSgVSGALTSLTFTDTALDTSVTGVTTTTA---LDFSDISTFAKGATVHGIGDVGTDGAYADGYVI 237

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 240 KTSGDITAiaaaeTTGLTDTSATTTVKEEVaasgpdaanlhsydNGKSyviqeGTGADAKYFKASVDATGKVtkgaeqst 319
Cdd:PRK06819 238 RTTDGKQY-----KGEVDATNGKVTFADDA--------------NGDP-----ITDATKLEAAAQFSPAGKA-------- 285

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 320 epkTADPLATLDKALSQVDSLRSSLGAVQNRFDSVINNLNSTVNNLSASQSRIQDADYATEVSNMSRANILQQAGTSVLA 399
Cdd:PRK06819 286 ---TASPLETLDDALKQVDGLRSSLGAVQNRFESTVTNLNNTVTNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLA 362

                        410
                 ....*....|....
gi 727185884 400 QANQSTQNVLSLLR 413
Cdd:PRK06819 363 QANQVPQTVLSLLR 376
FlgL COG1344
Flagellin and related hook-associated protein FlgL [Cell motility];
5-413 2.06e-47

Flagellin and related hook-associated protein FlgL [Cell motility];


Pssm-ID: 440955 [Multi-domain]  Cd Length: 245  Bit Score: 162.34  E-value: 2.06e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884   5 INTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQASRNANDGISLAQTTEGALNE 84
Cdd:COG1344    3 ISTNMSALNALRNLNRTQSDLAKLQEQLSSGKRINSASDDPAGAAIALRLRSQIRGLEQYQRNANDAISRLQTAEGALGE 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884  85 VNDNLQNIRRLTVQSQNGSNSASDLQSIQDEISQRLSEINRISEQTDFNGVKVLSSDQkltiqvgandgetidielkdin 164
Cdd:COG1344   83 ITDILQRARELAVQAANGTLSDEDRAAIAAELEQLLDQLLSIANTTDFNGRYLFAGTA---------------------- 140

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 165 aktlglekfsvadgidttkvgakatnvqtgkdltitnttnkqangaapasflkdnatgdiyavgTDGKNYKATIDKTSGD 244
Cdd:COG1344  141 ----------------------------------------------------------------TDTPPFQVDYQGDAGQ 156

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 245 ITAIaaaettgltdtsatttvkeevaasgpdaanlhsydngksyviqegtgadakyfkasvdatgkvtkgaeqstepkta 324
Cdd:COG1344  157 RTAA---------------------------------------------------------------------------- 160

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 325 dpLATLDKALSQVDSLRSSLGAVQNRFDSVINNLNSTVNNLSASQSRIQDADYATEVSNMSRANILQQAGTSVLAQANQS 404
Cdd:COG1344  161 --LGALDAALDNVSSARAELGARQNRLESAINNLSDLSENLTAALSRLEDADMAEAITRLTKLQTLLQAALAALAQANQL 238


                 ....*....
gi 727185884 405 TqnVLSLLR 413
Cdd:COG1344  239 S--LLDLLR 245
Flagellin_N pfam00669
Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial ...
 5-139 2.92e-38

Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial flagella. This family includes flagellins and hook associated protein 3. Structurally this family forms an extended helix that interacts with pfam00700.


Pssm-ID: 425809 [Multi-domain]  Cd Length: 139  Bit Score: 134.78  E-value: 2.92e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884    5 INTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQASRNANDGISLAQTTEGALNE 84
Cdd:pfam00669   1 INTNSAALAARSNLNKNQAELSKAQERLSTGLRINSALDDAAGLAISVSLRAQIAGLSQAVRNNSLGIGRLQTAQGALSE 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 727185884   85 VNDNLQNIRRLTVQSQNGSNSASDLQSIQDEISQRLSEINRISEQTDFNGVKVLS 139
Cdd:pfam00669  81 VTDILQRMKELAVQASNGGNSDIDRASIQAEIQQLTDELNNIANTTSFNGEYLLA 135
flagell_flgL TIGR02550
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated ...
 5-139 9.24e-17

flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated proteins designated FlgL (or HAP3) encoded in bacterial flagellar operons. A N-terminal region of about 150 residues and a C-terminal region of about 85 residues are conserved. Members show considerable length heterogeneity between these two well-conserved terminal regions; the seed alignment 486 columns, 393 of which are represented in the model, while members of this family are from 287 to over 500 residues in length. This model distinguishes FlgL from the flagellin gene product FliC. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274195 [Multi-domain]  Cd Length: 306  Bit Score: 80.47  E-value: 9.24e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884    5 INTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDD--AAGQAISNRftANIKGLTQASRNANDGISLAQTTEGAL 82
Cdd:TIGR02550   2 VSTNMLYNNSLNSITNNQSRLAKLQQQLSSGKRINKPSDDpvAAAQALNLN--QELAQLEQYQKNIDDAKNWLSQTETAL 79

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 727185884   83 NEVNDNLQNIRRLTVQSQNGSNSASDLQSIQDEISQRLSEINRISEQTDFNGVKVLS 139
Cdd:TIGR02550  80 SSVGDVLQRARELAVQAANGTLSDDDRKAIAKEIKQLLDQLVNLANTKDGNGRYIFS 136
 
Name Accession Description Interval E-value
PRK06819 PRK06819
FliC/FljB family flagellin;
1-413 7.50e-164

FliC/FljB family flagellin;


Pssm-ID: 235867 [Multi-domain]  Cd Length: 376  Bit Score: 465.02  E-value: 7.50e-164
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884   1 MAQVINTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQASRNANDGISLAQTTEG 80
Cdd:PRK06819   1 MAAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISIAQTTEG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884  81 ALNEVNDNLQNIRRLTVQSQNGSNSASDLQSIQDEISQRLSEINRISEQTDFNGVKVLSSDQKLTIQVGANDGETIDIEL 160
Cdd:PRK06819  81 ALNEINNNLQRVRELTVQAQNGSNSSSDLDSIQDEISQRLAEIDRVSDQTQFNGVKVLAEDTTMSIQVGANDGETIDINL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 161 KDINAKTLGLEKFSVA-DGIDTTKVGAKATNVQTGKDLTITNTTnkqANGAAPASFLKDNATGDIYAVGTDGKNYKATID 239
Cdd:PRK06819 161 QKIDSKSLGLGSFSVSgVSGALTSLTFTDTALDTSVTGVTTTTA---LDFSDISTFAKGATVHGIGDVGTDGAYADGYVI 237

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 240 KTSGDITAiaaaeTTGLTDTSATTTVKEEVaasgpdaanlhsydNGKSyviqeGTGADAKYFKASVDATGKVtkgaeqst 319
Cdd:PRK06819 238 RTTDGKQY-----KGEVDATNGKVTFADDA--------------NGDP-----ITDATKLEAAAQFSPAGKA-------- 285

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 320 epkTADPLATLDKALSQVDSLRSSLGAVQNRFDSVINNLNSTVNNLSASQSRIQDADYATEVSNMSRANILQQAGTSVLA 399
Cdd:PRK06819 286 ---TASPLETLDDALKQVDGLRSSLGAVQNRFESTVTNLNNTVTNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLA 362

                        410
                 ....*....|....
gi 727185884 400 QANQSTQNVLSLLR 413
Cdd:PRK06819 363 QANQVPQTVLSLLR 376
PRK08026 PRK08026
FliC/FljB family flagellin;
1-413 6.99e-142

FliC/FljB family flagellin;


Pssm-ID: 236140 [Multi-domain]  Cd Length: 529  Bit Score: 414.91  E-value: 6.99e-142
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884   1 MAQVINTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQASRNANDGISLAQTTEG 80
Cdd:PRK08026   1 MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884  81 ALNEVNDNLQNIRRLTVQSQNGSNSASDLQSIQDEISQRLSEINRISEQTDFNGVKVLSSDQKLTIQVGANDGETIDIEL 160
Cdd:PRK08026  81 ALSEINNNLQRVRELTVQAATGTNSQSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLAKDGSMKIQVGANDGETITIDL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 161 KDINAKTLGLEKFSVADGIDTTKVGAKATN-VQTGKDLTITNTTNKQANGAAPASFLKDNATGDIYAVGTDGKNYKATID 239
Cdd:PRK08026 161 KKIDSDTLGLDGFNVNGKGTVANTAATVSDlTAAGATLDTTGLYDVKTKNAALTTADALAKLGDGDKVTATATGGDYTYN 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 240 KTSGDITAI--------AAAETTGLTDTSATTTVKEEVAASGP-----------DAANL--------------------- 279
Cdd:PRK08026 241 AKSGKYQAAdlaatltpDVGGTAGASYTIKDGTYEVNVDSDGKitlggsalyidATGNLttnnagaatkatldalkktas 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 280 ---------------------------HSYDNGKSYVIQEGT-------------------------------------- 294
Cdd:PRK08026 321 egaatakaalaaagvtvadgvtaktvkMSYTDKNGKVIDGGYavktgddyyaadydeitgaisatttyytakdgttktaa 400

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 295 ----GADAKYFKASVD------ATGKVTKGAEQSTEpKTADPLATLDKALSQVDSLRSSLGAVQNRFDSVINNLNSTVNN 364
Cdd:PRK08026 401 nklgGADGKTEVVTIDgktyvaSDGKQTTLAEAAAT-TTENPLAALDAAIASIDKFRSSLGAVQNRLDSAVTNLNNTTTN 479

                        490       500       510       520
                 ....*....|....*....|....*....|....*....|....*....
gi 727185884 365 LSASQSRIQDADYATEVSNMSRANILQQAGTSVLAQANQSTQNVLSLLR 413
Cdd:PRK08026 480 LSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQ 528
PRK08869 PRK08869
polar flagellin E;
2-413 9.47e-107

polar flagellin E;


Pssm-ID: 236344 [Multi-domain]  Cd Length: 376  Bit Score: 319.57  E-value: 9.47e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884   2 AQVINTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQASRNANDGISLAQTTEGA 81
Cdd:PRK08869   1 AVNVNTNVSAMTAQRNLNGATSALSQSMERLSSGKRINSAKDDAAGLQISNRLTTQIRGLDVAVRNANDGISIAQTAEGA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884  82 LNEVNDNLQNIRRLTVQSQNGSNSASDLQSIQDEISQRLSEINRISEQTDFNGVKVLS-SDQKLTIQVGANDGETIDIEL 160
Cdd:PRK08869  81 MNETTNILQRMRDLSLQSANGSNSASDRQALQEEVTALNDELNRIAETTSFGGTKLLNgSFGTKSFQIGANSGEAVSLDL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 161 KDINAKTLGLEKFSVADGidttkvGAKATNVQTGKDLTITNTTNKQANGAAPASFLKDNATGDIYAVGTDGKNykatidk 240
Cdd:PRK08869 161 KSMRSDAKIMGGVSYDAE------GGADKDWTVGAGNTDLNVSFDDKGGETQAITINAKAGDDIEELATYING------- 227

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 241 tSGDITAIAAAETTGLTDTSATTTVKEEVAASGPDAANLHSYDNGKSYViqegtgadakyfkASVDATgkVTKGAEQSte 320
Cdd:PRK08869 228 -QTDGVGASVSEDGKLQLFAAGQKVSGGVSFSGGLAAELGLGNATAVTV-------------DDLDIS--TVGGAQQA-- 289

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 321 pktadpLATLDKALSQVDSLRSSLGAVQNRFDSVINNLNSTVNNLSASQSRIQDADYATEVSNMSRANILQQAGTSVLAQ 400
Cdd:PRK08869 290 ------VAVIDAALKYVDSHRADLGAFQNRFTHAINNLQNISENLSASNSRIKDTDFAKETTELTKAQILQQAGTSILAQ 363

                        410
                 ....*....|...
gi 727185884 401 ANQSTQNVLSLLR 413
Cdd:PRK08869 364 AKQAPQSALSLLQ 376
PRK12806 PRK12806
flagellin; Provisional
 1-412 1.14e-64

flagellin; Provisional


Pssm-ID: 183761 [Multi-domain]  Cd Length: 475  Bit Score: 214.55  E-value: 1.14e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884   1 MAQVINTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQASRNANDGISLAQTTEG 80
Cdd:PRK12806   1 MAQVINTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQAVRNANDGISLAQVAEG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884  81 ALNEVNDNLQNIRRLTVQSQNGSNSASDLQSIQDEISQRLSEINRISEQTDFNGVKVLS-SDQKLTIQVGANDGETIDIE 159
Cdd:PRK12806  81 AMQETTNILQRMRELSVQAANSTNNSSDRASIQSEISQLKSELERIAQNTEFNGQRILDgSFSGASFQVGANSNQTINFS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 160 LKDINAKTLGLEKFS----VADGIDTTKVGAKATNVQTGKDLTITN----TTNKQANGAAPASFLKDNATGDIYAVG-TD 230
Cdd:PRK12806 161 IGSIKASSIGGIATAtgteVAGAAATDITIAIGGGAATSINSSANFtgalNGQDATSAYAKAAAINDAGIGGLSVTAsTS 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 231 GKNYKATIDKTSGDITAIA---------AAETTGLTDTSATTTVKEEVAASGPDAA------NLHSYDNGKSYVIQEGTG 295
Cdd:PRK12806 241 GTQAVGAIGGTAGDTYNLTingvaiytnLDVATALTNSDLRDAINGVSNQTGVVASlnggnmTLTAADGRNITVTESGTG 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 296 ADAKYFKASVDAT-------GKVTKGAEQ-----------------------------STEPKTADPLATLDKALSQVDS 339
Cdd:PRK12806 321 FTAGTDGLTVTGGafdgalrGTLSISAVDtiaiggtvaniglsaniskdtvgidsldvSTASGAQTAIKRIDAALNSVNS 400

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 727185884 340 LRSSLGAVQNRFDSVINNLNSTVNNLSASQSRIQDADYATEVSNMSRANILQQAGTSVLAQANQSTQNVLSLL 412
Cdd:PRK12806 401 NRANMGALQNRFESTIANLQNVSDNLSAARSRIQDADYAAEMASLTKNQILQQAGTAMLAQANSLPQSVLSLL 473
PRK12802 PRK12802
flagellin; Provisional
 1-412 6.60e-54

flagellin; Provisional


Pssm-ID: 139237 [Multi-domain]  Cd Length: 282  Bit Score: 180.46  E-value: 6.60e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884   1 MAQVINTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQASRNANDGISLAQTTEG 80
Cdd:PRK12802   1 MALTVNTNITSLTVQKNLSRASDALSTSMTRLSSGLKINSAKDDAAGLQIATRQTSQIRGQTQAIKNANDGISIAQTAEG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884  81 ALNEVNDNLQNIRRLTVQSQNGSNSASDLQSIQDEISQRLSEINRISEQTDFNGVKVLS-SDQKLTIQVGANDGETIDIE 159
Cdd:PRK12802  81 ALQESTNILQRMRELAVQSRNDSNDSTDRAALNKEFTTMLDEITRIATSTTLNGKNLLDgSAGTMTFQVGANTGQSNQIT 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 160 lkdinaktlglekFSVADGIDTTKVGAKATNVQTGKDLTITNTTNKQAngaapasflkdnatgdiyavgtdgknykatid 239
Cdd:PRK12802 161 -------------FGLSASFDATGLGVGSGTLITGADSAAAETNAQAA-------------------------------- 195

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 240 ktsgditaiaaaettgltdtsatttvkeevaasgpdaanlhsydngksyviqegtgadakyfkasvdatgkvtkgaeqst 319
Cdd:PRK12802     --------------------------------------------------------------------------------

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 320 epktadpLATLDKALSQVDSLRSSLGAVQNRFDSVINNLNSTVNNLSASQSRIQDADYATEVSNMSRANILQQAGTSVLA 399
Cdd:PRK12802 196 -------ITAIDAALQTINTTRADLGAAQNRLQSTISNLQNINENASAARGRVQDTDFAAETAQLTKQQTLQQASTSVLA 268

                        410
                 ....*....|...
gi 727185884 400 QANQSTQNVLSLL 412
Cdd:PRK12802 269 QANQLPSAVLKLL 281
PRK12804 PRK12804
flagellin; Provisional
 5-413 1.64e-49

flagellin; Provisional


Pssm-ID: 183759 [Multi-domain]  Cd Length: 301  Bit Score: 169.79  E-value: 1.64e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884   5 INTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQASRNANDGISLAQTTEGALNE 84
Cdd:PRK12804   3 INHNIAALNTLNRLSANNGASQKNMEKLSSGLKINRAGDDAAGLAISEKMRGQIRGLEMASKNAQDGISLIQTAEGALTE 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884  85 VNDNLQNIRRLTVQSQN-GSNSASDLQSIQDEISQRLSEINRISEQTDFNGVKVLSSD----------QKLTIQVGANDG 153
Cdd:PRK12804  83 THSILQRVRELVVQAGNtGTQDGTDLGAIQDEIKALVDEIDGISDRTEFNGKKLLDGTfkpaapaagtKSLTFQIGANAA 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 154 ETIDIELKDINAKTLGlekfsvadgidTTKVGAKATNVQTGKDLTITnttnkqangaapasflkdnatgdiyavgtdgkn 233
Cdd:PRK12804 163 QQLSVNIEAMSADALG-----------VKDTDGTLVTGKSVSDIDVT--------------------------------- 198

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 234 ykatidktsgDITAIAAAETTGLTDTsatttvkeevaasgpdaanlhsydngksyviqegtgadakyfkasvdatgkvtk 313
Cdd:PRK12804 199 ----------KFANAAAAADGGFDDQ------------------------------------------------------ 214

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 314 gaeqstepktadpLATLDKALSQVDSLRSSLGAVQNRFDSVINNLNSTVNNLSASQSRIQDADYATEVSNMSRANILQQA 393
Cdd:PRK12804 215 -------------LKIVDGAIKQVSDQRSKLGAVQNRLEHTINNLGASGENLTAAESRIRDVDMAKEMSEFTKNNILSQA 281

                        410       420
                 ....*....|....*....|
gi 727185884 394 GTSVLAQANQSTQNVLSLLR 413
Cdd:PRK12804 282 SQAMLAQANQQPQNVLQLLR 301
FlgL COG1344
Flagellin and related hook-associated protein FlgL [Cell motility];
5-413 2.06e-47

Flagellin and related hook-associated protein FlgL [Cell motility];


Pssm-ID: 440955 [Multi-domain]  Cd Length: 245  Bit Score: 162.34  E-value: 2.06e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884   5 INTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQASRNANDGISLAQTTEGALNE 84
Cdd:COG1344    3 ISTNMSALNALRNLNRTQSDLAKLQEQLSSGKRINSASDDPAGAAIALRLRSQIRGLEQYQRNANDAISRLQTAEGALGE 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884  85 VNDNLQNIRRLTVQSQNGSNSASDLQSIQDEISQRLSEINRISEQTDFNGVKVLSSDQkltiqvgandgetidielkdin 164
Cdd:COG1344   83 ITDILQRARELAVQAANGTLSDEDRAAIAAELEQLLDQLLSIANTTDFNGRYLFAGTA---------------------- 140

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 165 aktlglekfsvadgidttkvgakatnvqtgkdltitnttnkqangaapasflkdnatgdiyavgTDGKNYKATIDKTSGD 244
Cdd:COG1344  141 ----------------------------------------------------------------TDTPPFQVDYQGDAGQ 156

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 245 ITAIaaaettgltdtsatttvkeevaasgpdaanlhsydngksyviqegtgadakyfkasvdatgkvtkgaeqstepkta 324
Cdd:COG1344  157 RTAA---------------------------------------------------------------------------- 160

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 325 dpLATLDKALSQVDSLRSSLGAVQNRFDSVINNLNSTVNNLSASQSRIQDADYATEVSNMSRANILQQAGTSVLAQANQS 404
Cdd:COG1344  161 --LGALDAALDNVSSARAELGARQNRLESAINNLSDLSENLTAALSRLEDADMAEAITRLTKLQTLLQAALAALAQANQL 238


                 ....*....
gi 727185884 405 TqnVLSLLR 413
Cdd:COG1344  239 S--LLDLLR 245
PRK12808 PRK12808
flagellin; Provisional
 5-413 4.81e-40

flagellin; Provisional


Pssm-ID: 237212 [Multi-domain]  Cd Length: 476  Bit Score: 148.95  E-value: 4.81e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884   5 INTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQASRNANDGISLAQTTEGALNE 84
Cdd:PRK12808   3 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAMNS 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884  85 VNDNLQNIRRLTVQSQNGSNSASDLQSIQDEISQRLSEINRISEQTDFNGVKVLSSDQKLTIQV--GANDGETIDIELKD 162
Cdd:PRK12808  83 VSNILLRMRDIANQSANGTNTDKNQAALQKEFAELQKQITYIADNTQFNDKNLLNSNSSINIQTldSSDGDKQIGIDLKS 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 163 INAKTLGLEKFSVADGIDTTKVG-----------AKAT-NVQTGKDLTITNTTNKQANGAAPASFLKDNATGDIYAVGTD 230
Cdd:PRK12808 163 ATLEALGINDLSIGANTDIEAVStkiaaldkntiAKATvEAKAAFDKAKDDTKAEDSNILDAAADGFKDGKADDAAKDVE 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 231 GKNYKATIDKTSGDITAIAAAETTGLTDTSATTTVKEEVAASGPDAAN------------------LHSYDNGKSYVIQE 292
Cdd:PRK12808 243 AIKTALSAFTGAATLEEAEAAKTAFEVAQKDLVDTYTKKAALTKDAVAdldtakttstrskaakdlVAAYDKAKSGAKPN 322

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 293 GTG-----ADAKYFKASVDATGKVT-------------------------KGAEQSTEPKTADPLAT---LDKALSQVDS 339
Cdd:PRK12808 323 DVAkayleAKMAYEKDNNAIDGKSKleaaddalekdaiktdaskvlvpklEAAKKATTNSKADSLDAvkaIDEALKTVAD 402

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 727185884 340 LRSSLGAVQNRFDSVINNLNSTVNNLSASQSRIQDADYATEVSNMSRANILQQAGTSVLAQANQSTQNVLSLLR 413
Cdd:PRK12808 403 NRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 476
Flagellin_N pfam00669
Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial ...
 5-139 2.92e-38

Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial flagella. This family includes flagellins and hook associated protein 3. Structurally this family forms an extended helix that interacts with pfam00700.


Pssm-ID: 425809 [Multi-domain]  Cd Length: 139  Bit Score: 134.78  E-value: 2.92e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884    5 INTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQASRNANDGISLAQTTEGALNE 84
Cdd:pfam00669   1 INTNSAALAARSNLNKNQAELSKAQERLSTGLRINSALDDAAGLAISVSLRAQIAGLSQAVRNNSLGIGRLQTAQGALSE 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 727185884   85 VNDNLQNIRRLTVQSQNGSNSASDLQSIQDEISQRLSEINRISEQTDFNGVKVLS 139
Cdd:pfam00669  81 VTDILQRMKELAVQASNGGNSDIDRASIQAEIQQLTDELNNIANTTSFNGEYLLA 135
PRK12807 PRK12807
flagellin; Provisional
 5-413 1.97e-33

flagellin; Provisional


Pssm-ID: 171737 [Multi-domain]  Cd Length: 287  Bit Score: 126.48  E-value: 1.97e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884   5 INTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQASRNANDGISLAQTTEGALNE 84
Cdd:PRK12807   3 INTNINSMRTQEYMRQNQDKMNVSMNRLSSGKRINSAADDAAGLAIATRMRARQSGLEKASQNTQDGMSLIRTAESAMNS 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884  85 VNDNLQNIRRLTVQSQNGSNSASDLQSIQDEISQRLSEINRISEQTDFNGVKVLSSDQKLTIQVGANDGETIDIELKDin 164
Cdd:PRK12807  83 VSNILTRMRDIAVQSSNGTNTAENQSALQKEFAELQEQIDYIAKNTEFNDKNLLAGTGAVTIGSTSISGAEISIETLD-- 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 165 aktlglekfsvadgidttkvgAKATNVQTGKDLTITNTTNKQANGAAPASFLKDNATGDiyavgtdgknykatidktsgd 244
Cdd:PRK12807 161 ---------------------SSATNQQITIKLANTTAEKLGIDATTSNISISGAASAL--------------------- 198

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 245 iTAIAAaettgltdtsatttvkeevaasgpdaanlhsydngksyviqegtgadakyfkasvdatgkvtkgaeqstepkta 324
Cdd:PRK12807 199 -AAISA-------------------------------------------------------------------------- 203

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 325 dplatLDKALSQVDSLRSSLGAVQNRFDSVINNLNSTVNNLSASQSRIQDADYATEVSNMSRANILQQAGTSVLAQANQS 404
Cdd:PRK12807 204 -----LNTALNTVAGNRATLGATLNRLDRNVENLNNQATNMASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQT 278


                 ....*....
gi 727185884 405 TQNVLSLLR 413
Cdd:PRK12807 279 PQMVSKLLQ 287
PRK12803 PRK12803
flagellin; Provisional
 4-413 1.14e-32

flagellin; Provisional


Pssm-ID: 183758 [Multi-domain]  Cd Length: 335  Bit Score: 125.69  E-value: 1.14e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884   4 VINTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQASRNANDGISLAQTTEGALN 83
Cdd:PRK12803   2 IINHNTSAINASRNNSINAANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQASRNTSKAINFIQTTEGNLN 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884  84 EVNDNLQNIRRLTVQSQNGSNSASDLQSIQDEISQRLSEINRISEQTDFNGVKVLSSDqkltiqvgandgetidielkdi 163
Cdd:PRK12803  82 EVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSNK---------------------- 139

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 164 naktlglekfsvadgidttkvgAKATNVQTGKDLTItnttnKQANGAAPASFLKDNATgdiyavgtdgknYKATIDKTSG 243
Cdd:PRK12803 140 ----------------------SAAQNVRTAEELGM-----QPAKINTPASLSGSQAS------------WTLRVHVGAN 180

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 244 DITAIAaaettgltdtsatttvkeeVAASGPDAANLHSYDNGKSYV-IQEGT---GADAKYFKASVDATGKVTKGAEQST 319
Cdd:PRK12803 181 QDEAIA-------------------VNIYAANVANLFSGEGAQQAApVQEGAqqeGAQAAPAPAAAPAQGGVNSPVNVTT 241

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 320 EPKTADPLATLDKALSQVDSLRSSLGAVQNRFDSVINNLNSTVNNLSASQSRIQDADYATEVSNMSRANILQQAGTSVLA 399
Cdd:PRK12803 242 TVDANMSLAKIENAIRMISDQRANLGAFQNRLESIKASTEYAIENLKASYAQIKDATMTDEVVASTTNSILTQSAMAMIA 321

                        410
                 ....*....|....
gi 727185884 400 QANQSTQNVLSLLR 413
Cdd:PRK12803 322 QANQVPQYVLSLLR 335
PRK13588 PRK13588
flagellin B; Provisional
 1-413 4.04e-29

flagellin B; Provisional


Pssm-ID: 237440 [Multi-domain]  Cd Length: 514  Bit Score: 118.82  E-value: 4.04e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884   1 MAQVINTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQASRNANDGISLAQTTEG 80
Cdd:PRK13588   1 MSFRINTNIAALNAHAVGVQNNRDLSSSLEKLSSGLRINKAADDASGMAIADSLRSQSANLGQAIRNANDAIGMVQTADK 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884  81 ALNEVNDNLQNIRRLTVQSQNGSNSASDLQSIQDEISQRLSEINRISEQTDFNGVKVLS-SDQKLTIQVGANDGETIDIE 159
Cdd:PRK13588  81 AMDEQIKILDTIKTKAVQAAQDGQTLESRRALQSDIQRLLEELDNIANTTSFNGQQMLSgSFSNKEFQIGAYSNTTVKAS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 160 LKDINAKTLGLEKFSVA--------------------------DGIDTTKV----------------------------- 184
Cdd:PRK13588 161 IGATSSDKIGHVRMETSsfsgegmlasaaaqnltevglnfkqvDGVNDYKIetvristsagtgigalseiinrfsdtlgv 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 185 -------GAKATNVQTG--KDLTITNTT--------NKQANGAAPASF--LKD--------NATGDIYAVGTDGKNYKAT 237
Cdd:PRK13588 241 rasynvmATGGTPVQSGtvRELTINGVEigtvndvhKNDADGRLINAInsVKDrtgveaslDIQGRINLTSIDGRAISVH 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 238 IDKTSGDITAIAAAETTGLTDT------SATTTVKEEVAASGPDAAN--LHSYDNGKSY---------VIQEGTGADAKY 300
Cdd:PRK13588 321 AASASGQVFGGGNFAGISGTQHavvgrlTLTRTDARDIIVSGVNFSHvgFHSAQGVAEYtvnlravrgIFDANVASAAGA 400

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 301 FKASVDA-TGKVTKGAEQSTEPKTADPLATLDKALSQVDSLRSSLGAVQNRFDSVINNLNSTVNNLSASQSRIQDADYAT 379
Cdd:PRK13588 401 NANGAQAeTNSQGIGAGVTSLKGAMIVMDMAESARTQLDKIRSDMGSVQMQLVSTINNISVTQVNVKAAESQIRDVDFAE 480

                        490       500       510
                 ....*....|....*....|....*....|....
gi 727185884 380 EVSNMSRANILQQAGTSVLAQANQSTQNVLSLLR 413
Cdd:PRK13588 481 ESANFSKYNILAQSGSFAMAQANAVQQNVLRLLQ 514
PRK12584 PRK12584
flagellin A; Reviewed
 1-412 2.09e-27

flagellin A; Reviewed


Pssm-ID: 237146 [Multi-domain]  Cd Length: 510  Bit Score: 113.85  E-value: 2.09e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884   1 MAQVINTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQASRNANDGISLAQTTEG 80
Cdd:PRK12584   1 MAFQVNTNINALNAHVQSALTQNALKTSLEKLSSGLRINKAADDASGMTIADSLRSQASSLGQAIANTNDGMGIIQVADK 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884  81 ALNEVNDNLQNIRRLTVQSQNGSNSASDLQSIQDEISQRLSEINRISEQTDFNGVKVLSSD-QKLTIQVGANDGETIDIE 159
Cdd:PRK12584  81 AMDEQLKILDTIKVKATQAAQDGQTTESRKAIQSDIVRLIQGLDNIGNTTTYNGQALLSGQfTNKEFQVGAYSNQSIKAS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 160 LKDINAKTLGLEKF----------------------------------SVADGI-----------DTTKVGAKATNVQTG 194
Cdd:PRK12584 161 IGSTTSDKIGQVRIatgalitasgdisltfkqvdgvndvtlesvkvssSAGTGIgvlaevinknsDRTGVKAYASVITTS 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 195 --------------KDLTITNTTNKQANGAAPASFLKDNATGDIYAV-------------GTDGKNYKATIDKTSGDITA 247
Cdd:PRK12584 241 dvavqsgslsnltlNGIHIGNIADIKKNDSDGRLVAAINAVTSETGVeaytdqkgrlnlrSIDGRGIEIKTDSVSNGPSA 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 248 IAAAE-----TTGLTDTSATTTVKEE------VAASGPDAANLHSYDNGKSYVIQ-------------EGTGADAKYFKA 303
Cdd:PRK12584 321 LTMVNggqdlTKGSTNYGRLSLTRLDardinvVSASDSQHLGFSAIGFGESQVAEttvnlrdvtgnfnANVKSASGANYN 400

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 304 SVDATGKVTKGAEQSTEPKTADPLATLDKALSQVDSLRSSLGAVQNRFDSVINNLNSTVNNLSASQSRIQDADYATEVSN 383
Cdd:PRK12584 401 AVIASGNQSLGSGVTTLRGAMVVMDIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESAN 480

                        490       500
                 ....*....|....*....|....*....
gi 727185884 384 MSRANILQQAGTSVLAQANQSTQNVLSLL 412
Cdd:PRK12584 481 FNKNNILAQSGSYAMSQANTVQQNILRLL 509
Flagellin_C pfam00700
Bacterial flagellin C-terminal helical region; Flagellins polymerize to form bacterial ...
 327-412 2.51e-22

Bacterial flagellin C-terminal helical region; Flagellins polymerize to form bacterial flagella. There is some similarity between this family and pfam00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate and this is shown to be correct as structurally this family forms an extended helix that interacts with pfam00700.


Pssm-ID: 425827 [Multi-domain]  Cd Length: 86  Bit Score: 90.08  E-value: 2.51e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884  327 LATLDKALSQVDSLRSSLGAVQNRFDSVINNLNSTVNNLSASQSRIQDADYATEVSNMSRANILQQAGTSVLAQANQSTQ 406
Cdd:pfam00700   1 LDLIDEAITDLDSVRADLGAVQNRLESATTNLNNQQDNLKAAISRIEDVDPAEESTRMTKLQIQIQASYSLLSQANQLPQ 80


                  ....*.
gi 727185884  407 NVLSLL 412
Cdd:pfam00700  81 SLLNLL 86
PRK08411 PRK08411
flagellin; Reviewed
 1-413 1.30e-20

flagellin; Reviewed


Pssm-ID: 236260 [Multi-domain]  Cd Length: 572  Bit Score: 93.90  E-value: 1.30e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884   1 MAQVINTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQASRNANDGISLAQTTEG 80
Cdd:PRK08411   1 MGFRINTNVAALNAKANSDLNAKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQAISNGNDALGILQTADK 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884  81 ALNEVNDNLQNIRRLTVQSQNGSNSASDLQSIQDEISQRLSEINRISEQTDFNGVKVLSSD-QKLTIQVGANDGETIDIE 159
Cdd:PRK08411  81 AMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTTSFNGKQLLSGNfTNQEFQIGASSNQTVKAT 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 160 LKDINAKTLGLEKFSVA----------------DGID---------------------------TTKVGAKATNV----- 191
Cdd:PRK08411 161 IGATQSSKIGVTRFETGarittsgvvqltiknyNGIDdfkfqnvvistsvgtglgalaeeinknADKTGVRATFDvettg 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 192 -------QTGKDLTITNTT-------NKQANGAAPASF--LKD--------NATGDIYAVGTDGKNYKATIDKTSGDITA 247
Cdd:PRK08411 241 vaaikagTTSDDFAINGVTigkveykDGDGNGALVAAInsVKDttgveasiDENGKLVLTSRDGRGIKIDGDIGGGSGIL 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 248 IAAAETTG-------------------------LTDTSATTTV-----KEEVAASGPDAANLHSYDNG---------KSY 288
Cdd:PRK08411 321 ANMKENYGrlslvkndgkdilisgtnlsfagmgATDMISQASVslresKGQIDANVADAMGFNSYKGGvmiqgfssvSAF 400

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 289 VIQEGTG-----------------------------ADAKYFKASVDATGKVTKGAEQSTEPKTADPLAT---------- 329
Cdd:PRK08411 401 MSSEGSGfsqgsgysvgsgknysvglssgiqissasAMSTVYVVSAGSGFSSGSNLSQFAAMKTTAANVKdetagvttlk 480

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 330 --------LDKALSQVDSLRSSLGAVQNRFDSVINNLNSTVNNLSASQSRIQDADYATEVSNMSRANILQQAGTSVLAQA 401
Cdd:PRK08411 481 gamavmdiAETAITNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVDFAAESANYSKANILAQSGSYAMAQA 560

                        570
                 ....*....|..
gi 727185884 402 NQSTQNVLSLLR 413
Cdd:PRK08411 561 NAVQQNVLRLLQ 572
PRK13589 PRK13589
flagellin A;
1-413 2.53e-20

flagellin A;


Pssm-ID: 172158 [Multi-domain]  Cd Length: 576  Bit Score: 93.17  E-value: 2.53e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884   1 MAQVINTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQASRNANDGISLAQTTEG 80
Cdd:PRK13589   1 MGFRINTNIGALNAHANSVVNSRELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQAINNGNDAIGILQTADK 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884  81 ALNEVNDNLQNIRRLTVQSQNGSNSASDLQSIQDEISQRLSEINRISEQTDFNGVKVLSSD-QKLTIQVGANDGETIDIE 159
Cdd:PRK13589  81 AMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTTSFNGKQLLSGNfTNQEFQIGASSNQTIKAT 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 160 LKDINAKTLGLEKFSVA----------------DGID---------TTKVG-------------AKATNVQ--------- 192
Cdd:PRK13589 161 IGATQSSKIGVTRFETGgrsftsgevqltiknyNGIDdfkfqkvviSTSVGtglgalaeeinksADKTGVRatftvettg 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 193 --------TGKDLTITNTTNKQA-------NGAAPASF--LKD--------NATGDIYAVGTDGKNYKATID-------- 239
Cdd:PRK13589 241 vaaikagtTSQDFAINGVTIGQVaykdgdgNGALVSAInsVKDttgveaskDANGQLVLTSRDGRGIKIDGNigggagil 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 240 -------------KTSGDITAIAAAETT----GLTDTSATTTV-----KEEVAASGPDAANLHSYDNGKSYVIQEGTGAD 297
Cdd:PRK13589 321 anmkenygrlslvKNDGKDILISGTNLSaigmGATDMISQASVslresKGRIDANIADAMGFNSYKGGGKFVVTGGFSSV 400

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 298 AKYFKA-------------------SVDATGKVTKGAEQS--------------TEPKTADPLATL-------------- 330
Cdd:PRK13589 401 SAFMSSegsgfsrgsgysvgsgknySVGLSQGIQIISSASamstvynvsagsgfSSGSGLSQFATMkttaagvkdetagv 480

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 331 -------------DKALSQVDSLRSSLGAVQNRFDSVINNLNSTVNNLSASQSRIQDADYATEVSNMSRANILQQAGTSV 397
Cdd:PRK13589 481 ttlkgamavmdiaETAITNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVDFAAESANFSKYNILAQSGSYA 560

                        570
                 ....*....|....*.
gi 727185884 398 LAQANQSTQNVLSLLR 413
Cdd:PRK13589 561 MSQANAVQQNVLKLLQ 576
PRK12805 PRK12805
FliC/FljB family flagellin;
5-221 3.06e-18

FliC/FljB family flagellin;


Pssm-ID: 183760 [Multi-domain]  Cd Length: 287  Bit Score: 84.54  E-value: 3.06e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884   5 INTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQASRNANDGISLAQTTEGALNE 84
Cdd:PRK12805   3 VNTNIISLKTQEYLRKNNEGMTQAQERLASGKRINSSLDDAAGLAVVTRMNVKSTGLDAASKNSSMGIDLLQTADSALSS 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884  85 VNDNLQNIRRLTVQSQNGSNSASDLQSIQDEISQRLSEINRISEQTDFNGVKVLS-----SDQKLTIQVGANDGETIDIE 159
Cdd:PRK12805  83 MSSILQRMRQLAVQSSNGSFSDEDRKQYTAEFGSLIKELDHVADTTNYNNIKLLDqtatgAATQVSIQASDKANDLINID 162

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 727185884 160 L---KDINAKTLGLEKFSVADGIDTTKVGAKATNVQTGK--DLTITNTTNKQANGAAPASFLKDNAT 221
Cdd:PRK12805 163 LfnaKGLSAGTITLGSGSTVAGYSALSVADADSSQEATEaiDELINNISNGRALLGAGMSRLSYNVS 229
flagell_flgL TIGR02550
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated ...
 5-139 9.24e-17

flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated proteins designated FlgL (or HAP3) encoded in bacterial flagellar operons. A N-terminal region of about 150 residues and a C-terminal region of about 85 residues are conserved. Members show considerable length heterogeneity between these two well-conserved terminal regions; the seed alignment 486 columns, 393 of which are represented in the model, while members of this family are from 287 to over 500 residues in length. This model distinguishes FlgL from the flagellin gene product FliC. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274195 [Multi-domain]  Cd Length: 306  Bit Score: 80.47  E-value: 9.24e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884    5 INTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDD--AAGQAISNRftANIKGLTQASRNANDGISLAQTTEGAL 82
Cdd:TIGR02550   2 VSTNMLYNNSLNSITNNQSRLAKLQQQLSSGKRINKPSDDpvAAAQALNLN--QELAQLEQYQKNIDDAKNWLSQTETAL 79

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 727185884   83 NEVNDNLQNIRRLTVQSQNGSNSASDLQSIQDEISQRLSEINRISEQTDFNGVKVLS 139
Cdd:TIGR02550  80 SSVGDVLQRARELAVQAANGTLSDDDRKAIAKEIKQLLDQLVNLANTKDGNGRYIFS 136
flgL PRK07701
flagellar hook-associated protein FlgL; Validated
 5-134 7.22e-15

flagellar hook-associated protein FlgL; Validated


Pssm-ID: 181087 [Multi-domain]  Cd Length: 298  Bit Score: 74.64  E-value: 7.22e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884   5 INTNSLslmaqNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQASRNANDGISLAQTTEGALNE 84
Cdd:PRK07701   8 LANNFL-----RNINSNLEKLDKYQEQLSTGKKITRPSDDPVVAMKSLRYRTDLAEVEQYQKNASDAKSWLENTESALDQ 82

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 727185884  85 VNDNLQNIRRLTVQSQNGSNSASDLQSIQDEISQRLSEINRISeQTDFNG 134
Cdd:PRK07701  83 ATDILQRARELAVQAANGTNTQTDRQAIAQEIEQLKEQLIQIA-NTQYNG 131
flgL PRK08870
flagellar hook-associated protein FlgL; Reviewed
 5-396 5.18e-13

flagellar hook-associated protein FlgL; Reviewed


Pssm-ID: 236345 [Multi-domain]  Cd Length: 404  Bit Score: 69.94  E-value: 5.18e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884   5 INTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQASRNANDGISLAQTTEGALNE 84
Cdd:PRK08870   3 ISTAQMYQQSVNSMLDQQSQLSQLQQQLSSGKKLLTPSDDPVAAAQAVNLSQQSALLDQYTKNINLARNRLQQEESTLGS 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884  85 VNDNLQNIRRLTVQSQNGSNSASDLQSIQDEISQRLSEINRISEQTDFNGVKVLSSDQKLTIQVGANDGETIDIELKDin 164
Cdd:PRK08870  83 VEDLLQRARELVVQAGNGSLSDSDRQAIATELQGLRDQLLNLANSKDGSGNYLFAGTQSGTQPFAFDASGNVVYSGDQ-- 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 165 aktlGLEKFSVADGID--TTKVGAKA-TNVQTGKDLTITNttnkqANGAAPASFLKDNATGDIYAVGTDGKNYKATidkt 241
Cdd:PRK08870 161 ----GQRQVQVADSVQvaTNDPGDEVfMSVPNGGGDYVPN-----ANASNTGTGLLGSASITDPSDPVNGDTYTIT---- 227

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 242 sgdITAIAAAETTGLTDTSATTTVKEEVAASGPDAANLhsydNGKSYVIqEGTGADAKYF------KASV-DATGKVTKG 314
Cdd:PRK08870 228 ---FTDNGAGGTNTYVTDSSTGTVVTAQAYDAGQPINF----NGVEVQI-SGAPAAGDSFtltpapQASIfDTLDDAIAA 299

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 315 AEQSTEPKTADP---------LATLDKALSQVDSLRSSLGAVQNRFDSVINNLNSTVNNLSASQSRIQDADYATEVSNMS 385
Cdd:PRK08870 300 LESPVSTPAADAalqnalaqaLRNLDNALNNVLTARASVGARLNELDSAEAVHEDNKLQNTSALSDLEDLDYASAISEFE 379

                        410
                 ....*....|..
gi 727185884 386 -RANILQQAGTS 396
Cdd:PRK08870 380 lQQAALQAAQQA 391
PRK06663 PRK06663
flagellar hook-associated protein 3;
8-405 2.29e-12

flagellar hook-associated protein 3;


Pssm-ID: 180648 [Multi-domain]  Cd Length: 419  Bit Score: 68.17  E-value: 2.29e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884   8 NSLSLMAQNN-----LNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQASRNANDGISLAQTTEGAL 82
Cdd:PRK06663   2 MRVSHPMQYNnlkssLRRQESKMTKLQNQLSTGQRIQKLRDDPTAATHSIRYKSRLFKLDRYQKNIDDGKDRLRYAEGYL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884  83 NEVNDNLQNIRRLTVQSQNGSNSASDLQSIQDEISQRLSEINRISEQTDFNGVKVLSSDQKLT----------------- 145
Cdd:PRK06663  82 QSITNILQRARELAVQGANGTYQADDKKKIAKEIDELLEDLVDIANARGADGYSIFSGTKIDTepfevirgnikglqgda 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 146 -----IQV---GANDGETIDIE-LKDINAKTLGLEKFSVADGIDTTKVGAKATNVQTGKDLTITNTTNKQANGaapasfl 216
Cdd:PRK06663 162 gsnqiIGVeynGDIGEQNREIEnGIYIPVNYPGNKVFWGTNQSIISSVDASGYVVKEDQKIYIDGVEIHLSAG------- 234

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 217 kDNATGDIYAVGTDGKNYKATIDK-TSGDITAIAAAETTGLTDTSATTTVKEEVAASGpdAANLHSYDNGKSYVIQEGTg 295
Cdd:PRK06663 235 -DTIDDIIAKINDSSAPVKASLDPvLNSISLKTTTPHQIWLEDEEGGTVLQDLGLITN--ATKEPPYNYSNSAEVSGRS- 310

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 296 adakYFKASVDATGKVTKGAEQSTEPKTadpLATLDKALSQVDSLRSSLGAVQNRFDSVINNLNSTVNNLSASQSRIQDA 375
Cdd:PRK06663 311 ----IFDSLIQLRDALLNNDQELIGGRA---LGEIDEALDNLLTTLADLGAKENRLDRSYARISKEKLDMTEALSKNEDI 383

                        410       420       430
                 ....*....|....*....|....*....|
gi 727185884 376 DYATEVSNMSRANILQQAGTSVLAQANQST 405
Cdd:PRK06663 384 DVTEAITNLNMLELAHQASLGVSGKIMQPT 413
flgL PRK07192
flagellar hook-associated protein FlgL; Reviewed
 5-123 1.79e-07

flagellar hook-associated protein FlgL; Reviewed


Pssm-ID: 235956 [Multi-domain]  Cd Length: 305  Bit Score: 52.33  E-value: 1.79e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884   5 INTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQASRNANDGISLAQTTEGALNE 84
Cdd:PRK07192   3 ISTNTLYSTMLRSIQQLQAGLGKLQQQMSTGKRILTPSDDPIASARLLELSREQSNNSQYADNIANLSNSLNNQEGHLSG 82

                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 727185884  85 VNDNLQNIRRLTVQSQNGSNSASDLQSIQDEISQRLSEI 123
Cdd:PRK07192  83 VNDQLQSIRSLLVAAGNGSLSDEDRSAMATELRSMLDSL 121
flgL PRK12717
flagellar hook-associated protein 3;
17-134 2.19e-07

flagellar hook-associated protein 3;


Pssm-ID: 171679 [Multi-domain]  Cd Length: 523  Bit Score: 52.82  E-value: 2.19e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884  17 NLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQASRNANDGISLAQTTEGALNEVNDNLQNIRRLT 96
Cdd:PRK12717  15 NYQRNYSNLVKTQEQASSGIRIQTAADDPVGAARLLQLQQQQAMLDQYSGNITTIKNSLTQEESTLTSINDTLQRARELA 94

                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 727185884  97 VQSQNGSNSASDLQSIQDEISQRLSEINRISEQTDFNG 134
Cdd:PRK12717  95 VSAGNGGLTDADRKAIASELKQIEAQLLGLMNSKDANG 132
PRK12687 PRK12687
flagellin; Reviewed
 7-413 6.36e-05

flagellin; Reviewed


Pssm-ID: 105853 [Multi-domain]  Cd Length: 311  Bit Score: 44.66  E-value: 6.36e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884   7 TNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQASRNANDGISLAQTTEGALNEV- 85
Cdd:PRK12687   6 TNTSAMTALQTLRNVSSSLATTQNRISTGYRVATASDNSAYWSIATTMRSDNEALSAVSDALGLGAATVDTMYTALTSVv 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884  86 NDNLQNIRRLTVQSQNGSNSASDLQSIQDEISQRLSEINRISEQTDFNGVKVLSsdqkltiqvgandgetIDIELKDINA 165
Cdd:PRK12687  86 GDSKSGLTALKAKLVAAREPGIDRTKIQSEITAIQNDLKNTAGLAVFNGENWLS----------------VDSSPSSYNA 149

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 166 KTLGLEKFSVADGIDTTKVgakatnvqtgKDLTITNTTNKQANGAAPASFLKDNATGdiyavgtdgknykatidktsGDI 245
Cdd:PRK12687 150 TKSVVSSFTRVGGTVAIKT----------IDVNIAKLALYDTNGSSTTGILDKTVTV--------------------GTA 199

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 246 TAIAAAETTGLTDTSATttvkeevaasgpDAANLHSYdngksyviqegtgadakyfkasvdatgkvtkgaeqstepktad 325
Cdd:PRK12687 200 TASVSSIDIHLLTDSAT------------DLTKLDGY------------------------------------------- 224

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884 326 pLATLDKALSQVDSLRSSLGAVQNRFDSVINNLNSTVNNLSASQSRIQDADYATEVSNMSRANILQQAGTSVLAQANQST 405
Cdd:PRK12687 225 -IGIVDQALGSVTQASADLGATKTRIDSNSNFVKSLRDAIDRGVGQLVDADMNAESTRLQALQTQQQLGIQALSIANQGS 303


                 ....*...
gi 727185884 406 QNVLSLLR 413
Cdd:PRK12687 304 QSILSLFK 311
flgL PRK12718
flagellar hook-associated protein FlgL; Provisional
 9-145 2.53e-04

flagellar hook-associated protein FlgL; Provisional


Pssm-ID: 79176 [Multi-domain]  Cd Length: 510  Bit Score: 43.26  E-value: 2.53e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884   9 SLSLMAQNNLN---KSQSSLGTAIERLSSGLRINSAKDD--AAGQAISNRFTANIKGLTQASRNANDGISLAQTTegALN 83
Cdd:PRK12718   4 STALIYQNGLNgvlNQEAAMARLQEQLSSGRRVLTPADDplAAALAVNVSQTSSMNSNYDANRKQAEQALGAQTN--TLQ 81

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 727185884  84 EVNDNLQNIRRLTVQSQNGSNSASDLQSIQDEISQRLSEINRISEQTDFNGVKVLSSDQKLT 145
Cdd:PRK12718  82 SVVKNMQEMLKRVVEAGNGTMSDADRQALVIALKGAREELVGLANATDGNGQYLFSGYKGFT 143
PRK14692 PRK14692
flagellar hook-associated protein FlgL;
16-116 1.85e-03

flagellar hook-associated protein FlgL;


Pssm-ID: 173155 [Multi-domain]  Cd Length: 749  Bit Score: 40.71  E-value: 1.85e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884  16 NNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQASRNANDGISLAQTTEGALNEVNDNLQNIRRL 95
Cdd:PRK14692  14 NNSMGGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQVKESTSRAQEMTQNSMKALQDMVKLLEDFKVK 93

                         90       100
                 ....*....|....*....|.
gi 727185884  96 TVQSQNGSNSASDLQSIQDEI 116
Cdd:PRK14692  94 VTQAASDSNSQTSREAIAKEL 114
flgL PRK08073
flagellar hook-associated protein 3;
5-123 2.36e-03

flagellar hook-associated protein 3;


Pssm-ID: 181222 [Multi-domain]  Cd Length: 287  Bit Score: 39.58  E-value: 2.36e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727185884   5 INTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQASRNANDGISLAQTTEGALNE 84
Cdd:PRK08073   3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLSMSEDPLAASKSFAIQHSLANIEQMQKDVADSKNVLNQTENTLSG 82

                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 727185884  85 VNDNLQNIRRLTVQSQNGSNSASDLQSIQDEISQRLSEI 123
Cdd:PRK08073  83 MSKSLTRVDQLVLQALNGTNDEKELKAIGAEIDQILKQV 121
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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