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Conserved domains on  [gi|727221247|ref|WP_033682199|]
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MULTISPECIES: YbgA family protein [Streptococcus]

Protein Classification

YbgA family protein( domain architecture ID 10551134)

YbgA family protein is a DUF1722 domain-containing protein; similar to Escherichia coli protein YbgA

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DUF1722 pfam08349
Protein of unknown function (DUF1722); This domain of unknown function is found in bacteria ...
18-125 2.60e-25

Protein of unknown function (DUF1722); This domain of unknown function is found in bacteria and archaea and is homologous to the hypothetical protein ybgA from E. coli.


:

Pssm-ID: 429939  Cd Length: 115  Bit Score: 92.59  E-value: 2.60e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727221247   18 KYLVLSHSSNIYNEIRQYLKNEEVE-----VSQVQEMIDRACQIPEHRGQVCNAFQHIWGYFKKKATDAERKDYMLLFDR 92
Cdd:pfam08349   1 KYLLMAHSQKIYRELGRLVANAEKLpleelAEEYEELLMEALAKPPTRGSHINVLQHIFGYFKKQLSADEKQEFLELIEK 80
                          90       100       110
                  ....*....|....*....|....*....|...
gi 727221247   93 YRFGQASKEDLIAKTRDLLDRYPNTYLQHSTLL 125
Cdd:pfam08349  81 YRQGLVPLIVPLTLLKHYARKYPNPYLLQQTYL 113
 
Name Accession Description Interval E-value
DUF1722 pfam08349
Protein of unknown function (DUF1722); This domain of unknown function is found in bacteria ...
18-125 2.60e-25

Protein of unknown function (DUF1722); This domain of unknown function is found in bacteria and archaea and is homologous to the hypothetical protein ybgA from E. coli.


Pssm-ID: 429939  Cd Length: 115  Bit Score: 92.59  E-value: 2.60e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727221247   18 KYLVLSHSSNIYNEIRQYLKNEEVE-----VSQVQEMIDRACQIPEHRGQVCNAFQHIWGYFKKKATDAERKDYMLLFDR 92
Cdd:pfam08349   1 KYLLMAHSQKIYRELGRLVANAEKLpleelAEEYEELLMEALAKPPTRGSHINVLQHIFGYFKKQLSADEKQEFLELIEK 80
                          90       100       110
                  ....*....|....*....|....*....|...
gi 727221247   93 YRFGQASKEDLIAKTRDLLDRYPNTYLQHSTLL 125
Cdd:pfam08349  81 YRQGLVPLIVPLTLLKHYARKYPNPYLLQQTYL 113
YbgA COG3272
Uncharacterized conserved protein YbgA, DUF1722 family [Function unknown];
15-125 9.05e-14

Uncharacterized conserved protein YbgA, DUF1722 family [Function unknown];


Pssm-ID: 442503  Cd Length: 246  Bit Score: 65.29  E-value: 9.05e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727221247  15 ARNKYLVLSHSSNIYNEIRQYLKN------EEVeVSQVQEMIDRACQIPEHRGQVCNAFQHIWGYFKKKATDAERKDYML 88
Cdd:COG3272  121 SRHKYLLMAHSQKAYRELGRLVANakkrplEEL-AEEYEELLMEALAKPATRKNHTNVLQHIFGYFKKQLSSDEKQELLE 199
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 727221247  89 LFDRYRFGQASKEDLIAKTRDLLDRYPNTYLQHSTLL 125
Cdd:COG3272  200 LIEDYRQGLVPLIVPLTLLKHYLRRYPDPYLAQQTYL 236
PRK10167 PRK10167
hypothetical protein; Provisional
16-119 4.10e-05

hypothetical protein; Provisional


Pssm-ID: 182280  Cd Length: 169  Bit Score: 41.06  E-value: 4.10e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727221247  16 RNKYLVLSHSSNIYNEIRQYLkneeVEVSQVQEMID-------RACQIPEHRGQV---CNAFQHIWGYFKKKATDAERKD 85
Cdd:PRK10167  39 RYKLVFLAHSQPEYRKLGPFV----ADIHQWQSLDDfynqyrqRVIVLLSHPANVrdhTNVLMHVQGYFRPHIDSTERQQ 114
                         90       100       110
                 ....*....|....*....|....*....|....
gi 727221247  86 YMLLFDRYRFGQASKEDLIAKTRDLLDRYPNTYL 119
Cdd:PRK10167 115 LAALIDSYRRGEQPLLAPLMRIKHYMALYPDAWL 148
 
Name Accession Description Interval E-value
DUF1722 pfam08349
Protein of unknown function (DUF1722); This domain of unknown function is found in bacteria ...
18-125 2.60e-25

Protein of unknown function (DUF1722); This domain of unknown function is found in bacteria and archaea and is homologous to the hypothetical protein ybgA from E. coli.


Pssm-ID: 429939  Cd Length: 115  Bit Score: 92.59  E-value: 2.60e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727221247   18 KYLVLSHSSNIYNEIRQYLKNEEVE-----VSQVQEMIDRACQIPEHRGQVCNAFQHIWGYFKKKATDAERKDYMLLFDR 92
Cdd:pfam08349   1 KYLLMAHSQKIYRELGRLVANAEKLpleelAEEYEELLMEALAKPPTRGSHINVLQHIFGYFKKQLSADEKQEFLELIEK 80
                          90       100       110
                  ....*....|....*....|....*....|...
gi 727221247   93 YRFGQASKEDLIAKTRDLLDRYPNTYLQHSTLL 125
Cdd:pfam08349  81 YRQGLVPLIVPLTLLKHYARKYPNPYLLQQTYL 113
YbgA COG3272
Uncharacterized conserved protein YbgA, DUF1722 family [Function unknown];
15-125 9.05e-14

Uncharacterized conserved protein YbgA, DUF1722 family [Function unknown];


Pssm-ID: 442503  Cd Length: 246  Bit Score: 65.29  E-value: 9.05e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727221247  15 ARNKYLVLSHSSNIYNEIRQYLKN------EEVeVSQVQEMIDRACQIPEHRGQVCNAFQHIWGYFKKKATDAERKDYML 88
Cdd:COG3272  121 SRHKYLLMAHSQKAYRELGRLVANakkrplEEL-AEEYEELLMEALAKPATRKNHTNVLQHIFGYFKKQLSSDEKQELLE 199
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 727221247  89 LFDRYRFGQASKEDLIAKTRDLLDRYPNTYLQHSTLL 125
Cdd:COG3272  200 LIEDYRQGLVPLIVPLTLLKHYLRRYPDPYLAQQTYL 236
PRK10167 PRK10167
hypothetical protein; Provisional
16-119 4.10e-05

hypothetical protein; Provisional


Pssm-ID: 182280  Cd Length: 169  Bit Score: 41.06  E-value: 4.10e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727221247  16 RNKYLVLSHSSNIYNEIRQYLkneeVEVSQVQEMID-------RACQIPEHRGQV---CNAFQHIWGYFKKKATDAERKD 85
Cdd:PRK10167  39 RYKLVFLAHSQPEYRKLGPFV----ADIHQWQSLDDfynqyrqRVIVLLSHPANVrdhTNVLMHVQGYFRPHIDSTERQQ 114
                         90       100       110
                 ....*....|....*....|....*....|....
gi 727221247  86 YMLLFDRYRFGQASKEDLIAKTRDLLDRYPNTYL 119
Cdd:PRK10167 115 LAALIDSYRRGEQPLLAPLMRIKHYMALYPDAWL 148
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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