|
Name |
Accession |
Description |
Interval |
E-value |
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
28-380 |
6.47e-51 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 173.20 E-value: 6.47e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 28 GFEVELYERARELRAVGSALSLMPNALTALERVGVRPDLT-RAQTFDSLRFLTRR-GRPIRAIDFGGLARQLGqpsLAIH 105
Cdd:COG0654 26 GIRVTVVERAPPPRPDGRGIALSPRSLELLRRLGLWDRLLaRGAPIRGIRVRDGSdGRVLARFDAAETGLPAG---LVVP 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 106 RASLQQALLEQARDCRIEL--GVSATGYlrHADGEGVTVLCSDGREVHADVLIGADGFNSAIRATMtgperptdwhyviw 183
Cdd:COG0654 103 RADLERALLEAARALGVELrfGTEVTGL--EQDADGVTVTLADGRTLRADLVVGADGARSAVRRLL-------------- 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 184 ratpafrhpkvtpGYVAHYWGRGQRFGladigegnvywwgtrnmpaeqakdWRGGKAGIQRLYAGWADEVQAVIEATPea 263
Cdd:COG0654 167 -------------GIGFTGRDYPQRAL------------------------WAGVRTELRARLAAAGPRLGELLELSP-- 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 264 dISSLPAQDRPfLERWGDGPVTLLGDAAHPMLTSLGQGAAIAIEDAAVLAHCLATI---DDPQAALRAYENRRRDRARAM 340
Cdd:COG0654 208 -RSAFPLRRRR-AERWRRGRVVLLGDAAHTMHPLGGQGANLALRDAAALAWKLAAAlrgRDDEAALARYERERRPRAARV 285
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 730530280 341 VETSRALSRIEQLEHPLRTVARDLYFRFAPERTFARQNEL 380
Cdd:COG0654 286 QRAADALGRLFHPDSPPLRLLRNAGLRLLDRLPPLKGGGL 325
|
|
| PRK06753 |
PRK06753 |
hypothetical protein; Provisional |
18-379 |
1.63e-48 |
|
hypothetical protein; Provisional
Pssm-ID: 168661 [Multi-domain] Cd Length: 373 Bit Score: 168.33 E-value: 1.63e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 18 LAAAACLKAAGFEVELYERARELRAVGSALSLMPNALTALERVGVRPDLTRA-QTFDSLRFLTRRGRPIRAidfggLARQ 96
Cdd:PRK06753 13 LTAAALLQEQGHEVKVFEKNESVKEVGAGIGIGDNVIKKLGNHDLAKGIKNAgQILSTMNLLDDKGTLLNK-----VKLK 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 97 LGQPSLAIHRASLQQALLEQARDCRIELGVSATgylrHADGEG--VTVLCSDGREVHADVLIGADGFNSAIRATMTGPER 174
Cdd:PRK06753 88 SNTLNVTLHRQTLIDIIKSYVKEDAIFTGKEVT----KIENETdkVTIHFADGESEAFDLCIGADGIHSKVRQSVNADSK 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 175 PTDWHYVIWRA---TPAFRHPKVtpgyVAHYWGRGQRFGLADIGEGNVYWWGTRNMPAEQAKDWRGGKAGIQRLYAGWAD 251
Cdd:PRK06753 164 VRYQGYTCFRGlidDIDLKLPDC----AKEYWGTKGRFGIVPLLNNQAYWFITINAKERDPKYSSFGKPHLQAYFNHYPN 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 252 EVQAVIEATPEADISSLPAQDRPFLERWGDGPVTLLGDAAHPMLTSLGQGAAIAIEDAAVLAHCLATIDDPQaALRAYEN 331
Cdd:PRK06753 240 EVREILDKQSETGILHHDIYDLKPLKSFVYGRIVLLGDAAHATTPNMGQGAGQAMEDAIVLANCLNAYDFEK-ALQRYDK 318
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 730530280 332 RRRDRARAMVETSRALSRIEQLEHPLRTVARDLYFRFAPERTFARQNE 379
Cdd:PRK06753 319 IRVKHTAKVIKRSRKIGKIAQIESKLLVALRNRVMKRMPNALAAGQTK 366
|
|
| FAD_binding_3 |
pfam01494 |
FAD binding domain; This domain is involved in FAD binding in a number of enzymes. |
134-344 |
2.59e-11 |
|
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
Pssm-ID: 396193 [Multi-domain] Cd Length: 348 Bit Score: 64.27 E-value: 2.59e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 134 HADGEGVTVLCSDGR-----EVHADVLIGADGFNSAIRAT----MTGPER-PTDWHYVIWRATPAfrhPKVTPGYVAHYW 203
Cdd:pfam01494 127 EQDGDGVTAVVRDRRdgeeyTVRAKYLVGCDGGRSPVRKTlgieFEGFEGvPFGSLDVLFDAPDL---SDPVERAFVHYL 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 204 -----GRGQRFG-LADIGEGNVYW---WGTRNMPAEQAKDWRGGKAGIQRLyAGWADevqavIEATPEaDISSLPAQDRp 274
Cdd:pfam01494 204 iyaphSRGFMVGpWRSAGRERYYVqvpWDEEVEERPEEFTDEELKQRLRSI-VGIDL-----ALVEIL-WKSIWGVASR- 275
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 730530280 275 FLERWGDGPVTLLGDAAHPMLTSLGQGAAIAIEDAAVLAHCLA---TIDDPQAALRAYENRRRDRARAMVETS 344
Cdd:pfam01494 276 VATRYRKGRVFLAGDAAHIHPPTGGQGLNTAIQDAFNLAWKLAavlRGQAGESLLDTYSAERLPVAWAVVDFA 348
|
|
| Ubi-OHases |
TIGR01988 |
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a ... |
14-369 |
3.46e-06 |
|
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) making it difficult to ascribe a specific activity to each one. Eukaryotes appear to have only a single homolog in this subfamily (COQ6) which complements UbiH, but also possess a non-orthologous gene, COQ7 which complements UbiF. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]
Pssm-ID: 273913 [Multi-domain] Cd Length: 385 Bit Score: 48.74 E-value: 3.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 14 GIGGLAAAACLKAAGFEVELYERARELRAVGS-----ALSLMPNALTALERVGVRPDL--TRAQTFDSLRFLTRRGRpiR 86
Cdd:TIGR01988 8 GMVGLALALALARSGLKVALIEATPLPAPADPgfdnrVSALSAASIRLLEKLGVWDKIepARAQPIRDIHVSDGGSF--G 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 87 AIDFGglARQLGQPSLA--IHRASLQQALLEQARDCR---IELGVSATGYLRHADgeGVTVLCSDGREVHADVLIGADGF 161
Cdd:TIGR01988 86 ALRFD--ADEIGLEALGyvVENRVLQQALWERLQELPnvtLLCPARVVELPRHSD--HVELTLDDGQQLRARLLVGADGA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 162 NSAIRATMTGPERPTDW--HYVIwratpAFRHPKVTPGYVAHywgrgQRFG---------LADIGEGNVywWGTRNMPAE 230
Cdd:TIGR01988 162 NSKVRQLAGIPTTGWDYgqSAVV-----ANVKHERPHQGTAW-----ERFTptgplallpLPDNRSSLV--WTLPPEEAE 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 231 QAKDW--RGGKAGIQRLYAGWADEVQAVIEatpeadISSLPAQ----DRPFLERwgdgpVTLLGDAAHPMLTSLGQGAAI 304
Cdd:TIGR01988 230 RLLALsdEEFLAELQRAFGSRLGAITLVGE------RHAFPLSlthaKRYVAPR-----LALIGDAAHTIHPLAGQGLNL 298
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 730530280 305 AIEDAAVLAHCLAT-------IDDPqAALRAYENRRRDRARAMVETSRALSRIEQLEHPLRTVARDLYFRFA 369
Cdd:TIGR01988 299 GLRDVAALAEVLEDarrrgedIGSL-RVLQRYERRRRFDNAAMLGATDGLNRLFSNDFPPLRLLRNLGLRLL 369
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
28-380 |
6.47e-51 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 173.20 E-value: 6.47e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 28 GFEVELYERARELRAVGSALSLMPNALTALERVGVRPDLT-RAQTFDSLRFLTRR-GRPIRAIDFGGLARQLGqpsLAIH 105
Cdd:COG0654 26 GIRVTVVERAPPPRPDGRGIALSPRSLELLRRLGLWDRLLaRGAPIRGIRVRDGSdGRVLARFDAAETGLPAG---LVVP 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 106 RASLQQALLEQARDCRIEL--GVSATGYlrHADGEGVTVLCSDGREVHADVLIGADGFNSAIRATMtgperptdwhyviw 183
Cdd:COG0654 103 RADLERALLEAARALGVELrfGTEVTGL--EQDADGVTVTLADGRTLRADLVVGADGARSAVRRLL-------------- 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 184 ratpafrhpkvtpGYVAHYWGRGQRFGladigegnvywwgtrnmpaeqakdWRGGKAGIQRLYAGWADEVQAVIEATPea 263
Cdd:COG0654 167 -------------GIGFTGRDYPQRAL------------------------WAGVRTELRARLAAAGPRLGELLELSP-- 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 264 dISSLPAQDRPfLERWGDGPVTLLGDAAHPMLTSLGQGAAIAIEDAAVLAHCLATI---DDPQAALRAYENRRRDRARAM 340
Cdd:COG0654 208 -RSAFPLRRRR-AERWRRGRVVLLGDAAHTMHPLGGQGANLALRDAAALAWKLAAAlrgRDDEAALARYERERRPRAARV 285
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 730530280 341 VETSRALSRIEQLEHPLRTVARDLYFRFAPERTFARQNEL 380
Cdd:COG0654 286 QRAADALGRLFHPDSPPLRLLRNAGLRLLDRLPPLKGGGL 325
|
|
| PRK06753 |
PRK06753 |
hypothetical protein; Provisional |
18-379 |
1.63e-48 |
|
hypothetical protein; Provisional
Pssm-ID: 168661 [Multi-domain] Cd Length: 373 Bit Score: 168.33 E-value: 1.63e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 18 LAAAACLKAAGFEVELYERARELRAVGSALSLMPNALTALERVGVRPDLTRA-QTFDSLRFLTRRGRPIRAidfggLARQ 96
Cdd:PRK06753 13 LTAAALLQEQGHEVKVFEKNESVKEVGAGIGIGDNVIKKLGNHDLAKGIKNAgQILSTMNLLDDKGTLLNK-----VKLK 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 97 LGQPSLAIHRASLQQALLEQARDCRIELGVSATgylrHADGEG--VTVLCSDGREVHADVLIGADGFNSAIRATMTGPER 174
Cdd:PRK06753 88 SNTLNVTLHRQTLIDIIKSYVKEDAIFTGKEVT----KIENETdkVTIHFADGESEAFDLCIGADGIHSKVRQSVNADSK 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 175 PTDWHYVIWRA---TPAFRHPKVtpgyVAHYWGRGQRFGLADIGEGNVYWWGTRNMPAEQAKDWRGGKAGIQRLYAGWAD 251
Cdd:PRK06753 164 VRYQGYTCFRGlidDIDLKLPDC----AKEYWGTKGRFGIVPLLNNQAYWFITINAKERDPKYSSFGKPHLQAYFNHYPN 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 252 EVQAVIEATPEADISSLPAQDRPFLERWGDGPVTLLGDAAHPMLTSLGQGAAIAIEDAAVLAHCLATIDDPQaALRAYEN 331
Cdd:PRK06753 240 EVREILDKQSETGILHHDIYDLKPLKSFVYGRIVLLGDAAHATTPNMGQGAGQAMEDAIVLANCLNAYDFEK-ALQRYDK 318
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 730530280 332 RRRDRARAMVETSRALSRIEQLEHPLRTVARDLYFRFAPERTFARQNE 379
Cdd:PRK06753 319 IRVKHTAKVIKRSRKIGKIAQIESKLLVALRNRVMKRMPNALAAGQTK 366
|
|
| PRK06847 |
PRK06847 |
hypothetical protein; Provisional |
28-351 |
7.06e-46 |
|
hypothetical protein; Provisional
Pssm-ID: 235874 [Multi-domain] Cd Length: 375 Bit Score: 161.58 E-value: 7.06e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 28 GFEVELYERARELRAVGSALSLMPNALTALERVGVRPD-LTRAQTFDSLRFLTRRGRPIRAIDFGGLARQLGQPSLAIHR 106
Cdd:PRK06847 27 GIAVDLVEIDPEWRVYGAGITLQGNALRALRELGVLDEcLEAGFGFDGVDLFDPDGTLLAELPTPRLAGDDLPGGGGIMR 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 107 ASLQQALLEQAR--DCRIELGVSATGYlrHADGEGVTVLCSDGREVHADVLIGADGFNSAIRATMTGPE-RPTDWHYVIW 183
Cdd:PRK06847 107 PALARILADAARaaGADVRLGTTVTAI--EQDDDGVTVTFSDGTTGRYDLVVGADGLYSKVRSLVFPDEpEPEYTGQGVW 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 184 RAT----PAFRHPKVtpgyvahYWGRGQRFGLADIGEGNVYWWGTRNMPaeqakdwrgGKAGIQRlyAGWADEVQAVIEA 259
Cdd:PRK06847 185 RAVlprpAEVDRSLM-------YLGPTTKAGVVPLSEDLMYLFVTEPRP---------DNPRIEP--DTLAALLRELLAP 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 260 TPEADISSLPAQ---DRPFLER----------WGDGPVTLLGDAAHPMLTSLGQGAAIAIEDAAVLAHCLATIDDPQAAL 326
Cdd:PRK06847 247 FGGPVLQELREQitdDAQVVYRpletllvpapWHRGRVVLIGDAAHATTPHLAQGAGMAIEDAIVLAEELARHDSLEAAL 326
|
330 340
....*....|....*....|....*
gi 730530280 327 RAYENRRRDRARAMVETSRALSRIE 351
Cdd:PRK06847 327 QAYYARRWERCRMVVEASARIGRIE 351
|
|
| PRK07538 |
PRK07538 |
hypothetical protein; Provisional |
6-346 |
1.93e-40 |
|
hypothetical protein; Provisional
Pssm-ID: 236046 [Multi-domain] Cd Length: 413 Bit Score: 147.74 E-value: 1.93e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 6 LKIVIAGAGIGGLAAAACLKAAGFEVELYERARELRAVGSALSLMPNALTALERVGVRPDLTR-AQTFDSLRFLTRRGRP 84
Cdd:PRK07538 1 MKVLIAGGGIGGLTLALTLHQRGIEVVVFEAAPELRPLGVGINLLPHAVRELAELGLLDALDAiGIRTRELAYFNRHGQR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 85 I----RaidfgGLARQLGQPSLAIHRASLQQALLEQARD----CRIELGVSATGYLRHADGEGVTVL---CSDGREVHAD 153
Cdd:PRK07538 81 IwsepR-----GLAAGYDWPQYSIHRGELQMLLLDAVRErlgpDAVRTGHRVVGFEQDADVTVVFLGdraGGDLVSVRGD 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 154 VLIGADGFNSAIRATMTGPERPTDWHYVI-WRATPafRHPKVTPG---YVAHywGRGQRFGLADIGEGN-------VYWW 222
Cdd:PRK07538 156 VLIGADGIHSAVRAQLYPDEGPPRWNGVMmWRGVT--EAPPFLTGrsmVMAG--HLDGKLVVYPISEPVdadgrqlINWV 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 223 GTRNMPAEQAK---DW--RGGKAGIQRLYAGWA----DeVQAVIEATPEadISSLPAQDRPFLERWGDGPVTLLGDAAHP 293
Cdd:PRK07538 232 AEVRVDDAGAPrreDWnrPGDLEDFLPHFADWRfdwlD-VPALIRAAEA--IYEYPMVDRDPLPRWTRGRVTLLGDAAHP 308
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 730530280 294 MLTSLGQGAAIAIEDAAVLAHCLATIDDPQAALRAYENRRRDRARAMVETSRA 346
Cdd:PRK07538 309 MYPVGSNGASQAILDARALADALAAHGDPEAALAAYEAERRPATAQIVLANRL 361
|
|
| PRK08163 |
PRK08163 |
3-hydroxybenzoate 6-monooxygenase; |
28-375 |
4.68e-39 |
|
3-hydroxybenzoate 6-monooxygenase;
Pssm-ID: 181262 [Multi-domain] Cd Length: 396 Bit Score: 143.64 E-value: 4.68e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 28 GFEVELYERARELRAVGSALSLMPNALTALERVGVRPDLTRAQTF-DSLRFL-TRRGRPIRAIDFGGLARQ-LGQPSLAI 104
Cdd:PRK08163 27 GIKVKLLEQAAEIGEIGAGIQLGPNAFSALDALGVGEAARQRAVFtDHLTMMdAVDAEEVVRIPTGQAFRArFGNPYAVI 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 105 HRASLQQALLEQARDC-RIELGVSATGYLRHADGEGVTVLCSDGREVHADVLIGADGFNSAIRATMTG-PERPTDwhYVI 182
Cdd:PRK08163 107 HRADIHLSLLEAVLDHpLVEFRTSTHVVGIEQDGDGVTVFDQQGNRWTGDALIGCDGVKSVVRQSLVGdAPRVTG--HVV 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 183 WRAT------PA---FRHPKVTPG---YVAHYWGR-GQRFGLADIGEGNVY--WWGTRnmpaeqakdwrGGKAGIQRLYA 247
Cdd:PRK08163 185 YRAVidvddmPEdlrINAPVLWAGphcHLVHYPLRgGEQYNLVVTFHSREQeeWGVKD-----------GSKEEVLSYFE 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 248 GWADEVQAVIEATPEADISSLPaqDRPFLERWGDGPVTLLGDAAHPMLTSLGQGAAIAIEDAAVLAHCL-ATIDDPQAAL 326
Cdd:PRK08163 254 GIHPRPRQMLDKPTSWKRWATA--DREPVAKWSTGRVTLLGDAAHPMTQYMAQGACMALEDAVTLGKALeGCDGDAEAAF 331
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 730530280 327 RAYENRRRDRARAMVETSRALSRIEQLEHPLRTVARDLYFRFAPERTFA 375
Cdd:PRK08163 332 ALYESVRIPRTARVVLSAREMGRIYHAKGVERQVRNLLWKGRTQEQFYD 380
|
|
| PRK06475 |
PRK06475 |
FAD-binding protein; |
14-340 |
1.61e-24 |
|
FAD-binding protein;
Pssm-ID: 180582 [Multi-domain] Cd Length: 400 Bit Score: 103.75 E-value: 1.61e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 14 GIGGLAAAACLKAAGFEVELYERARELRAVGSALSLMPNALTALERVGVRPDLTRAQTFDSLRFLT--RRGRPIRAIDFG 91
Cdd:PRK06475 11 GVAGLSAALELAARGWAVTIIEKAQELSEVGAGLQLAPNAMRHLERLGVADRLSGTGVTPKALYLMdgRKARPLLAMQLG 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 92 GLARQ-LGQPSLAIHRASLQQALLEQARD---CRIELGVSATGYLRHADGEGVTVLCSDGREVH-ADVLIGADGFNSAIR 166
Cdd:PRK06475 91 DLARKrWHHPYIVCHRADLQSALLDACRNnpgIEIKLGAEMTSQRQTGNSITATIIRTNSVETVsAAYLIACDGVWSMLR 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 167 AtMTGPERPTDWHYVIWRATPAFRH-PKV------TPGYVAHYWGRGQRFGLADIGEGNVYWWGTRNMPAEQAKDW--RG 237
Cdd:PRK06475 171 A-KAGFSKARFSGHIAWRTTLAADAlPASflsampEHKAVSAWLGNKAHFIAYPVKGGKFFNFVAITGGENPGEVWskTG 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 238 GKAGIQRLYAGWADEVQAVIEATPEADISSL--PAQDRpFLerwGDGPVTLLGDAAHPMLTSLGQGAAIAIEDAAVLAHC 315
Cdd:PRK06475 250 DKAHLKSIYADWNKPVLQILAAIDEWTYWPLfeMADAQ-FV---GPDRTIFLGDASHAVTPFAAQGAAMAIEDAAALAEA 325
|
330 340
....*....|....*....|....*
gi 730530280 316 LaTIDDPQAALRAYENRRRDRARAM 340
Cdd:PRK06475 326 L-DSDDQSAGLKRFDSVRKERIAAV 349
|
|
| PLN02927 |
PLN02927 |
antheraxanthin epoxidase/zeaxanthin epoxidase |
72-345 |
7.29e-23 |
|
antheraxanthin epoxidase/zeaxanthin epoxidase
Pssm-ID: 178515 [Multi-domain] Cd Length: 668 Bit Score: 100.56 E-value: 7.29e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 72 FDSLRFLTRRGRPIRAIdfgglarqlgqpslaIHRASLQQALleqARDCRIELGVSATGYLRHAD-GEGVTVLCSDGREV 150
Cdd:PLN02927 174 FDTFTPAASRGLPVTRV---------------ISRMTLQQIL---ARAVGEDVIRNESNVVDFEDsGDKVTVVLENGQRY 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 151 HADVLIGADGFNSAIRATMTGPERPTDWHYVIWRATPAFRHPKVTPGYVAHYWGRGQRFGLADIGEGNVYWWGTRNMPAE 230
Cdd:PLN02927 236 EGDLLVGADGIWSKVRNNLFGRSEATYSGYTCYTGIADFIPADIESVGYRVFLGHKQYFVSSDVGGGKMQWYAFHEEPAG 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 231 QAKDWRGGKAGIQRLYAGWADEVQAVIEATPEADISSLPAQDRPFLERWGDGPVTLLGDAAHPMLTSLGQGAAIAIEDAA 310
Cdd:PLN02927 316 GADAPNGMKKRLFEIFDGWCDNVLDLLHATEEDAILRRDIYDRSPGFTWGKGRVTLLGDSIHAMQPNMGQGGCMAIEDSF 395
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 730530280 311 VLAHCL----------ATIDDPQAALRAYENRRRDRARAMVETSR 345
Cdd:PLN02927 396 QLALELdeawkqsvetNTPVDVVSSLKRYEESRRLRVAIIHAMAR 440
|
|
| PRK07236 |
PRK07236 |
hypothetical protein; Provisional |
28-347 |
3.33e-18 |
|
hypothetical protein; Provisional
Pssm-ID: 235980 [Multi-domain] Cd Length: 386 Bit Score: 85.36 E-value: 3.33e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 28 GFEVELYER-ARELRAVGSALSLMPNALTALERVGVRPDLTRAQTFDSLRFLTRRGRPIRAidfgglaRQLGQPSLAIHR 106
Cdd:PRK07236 29 GWDVDVFERsPTELDGRGAGIVLQPELLRALAEAGVALPADIGVPSRERIYLDRDGRVVQR-------RPMPQTQTSWNV 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 107 asLQQALLEQARDCRIELGVSATGYlrHADGEGVTVLCSDGREVHADVLIGADGFNSAIRATMTGPERPTDWHYVIWRAT 186
Cdd:PRK07236 102 --LYRALRAAFPAERYHLGETLVGF--EQDGDRVTARFADGRRETADLLVGADGGRSTVRAQLLPDVRPTYAGYVAWRGL 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 187 -----------PAFRhpkvtpGYVAHYWGRGQRF-GLADIGEGNVYWWGTRNM------PAEQAKDWRG---GKAGIQRL 245
Cdd:PRK07236 178 vdeaalppearAALR------DRFTFQLGPGSHIlGYPVPGEDGSTEPGKRRYnwvwyrNAPAGEELDElltDRDGTRRP 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 246 YAGWADEVQAVIEATPEADISS-LPAQ--------DRPFL--------ERWGDGPVTLLGDAAHPMLTSLGQGAAIAIED 308
Cdd:PRK07236 252 FSVPPGALRDDVLAELRDDAAElLAPVfaelveatAQPFVqaifdlevPRMAFGRVALLGDAAFVARPHTAAGVAKAAAD 331
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 730530280 309 AAVLAHCL-ATIDDPQAALRAYENRRRDRARAMVETSRAL 347
Cdd:PRK07236 332 AVALAEALaAAAGDIDAALAAWEAERLAVGAAIVARGRRL 371
|
|
| FixC |
COG0644 |
Dehydrogenase (flavoprotein) [Energy production and conversion]; |
20-339 |
1.20e-15 |
|
Dehydrogenase (flavoprotein) [Energy production and conversion];
Pssm-ID: 440409 [Multi-domain] Cd Length: 281 Bit Score: 76.54 E-value: 1.20e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 20 AAACLKAAGFEVELYERARELRAVGSALSLMPNALTALERVGVRPDLTRAQTFDSLRFLTRRGRPIRAIDFGGlarqlgq 99
Cdd:COG0644 8 AARRLARAGLSVLLLEKGSFPGDKICGGGLLPRALEELEPLGLDEPLERPVRGARFYSPGGKSVELPPGRGGG------- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 100 psLAIHRASLQQALLEQARD--CRIELGVSATGYLRhaDGEGVTVLCSDGREVHADVLIGADGFNSAIRATM---TGPER 174
Cdd:COG0644 81 --YVVDRARFDRWLAEQAEEagAEVRTGTRVTDVLR--DDGRVVVRTGDGEEIRADYVVDADGARSLLARKLglkRRSDE 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 175 PTDWHYVIWRATPAFRHPKVTPGYVAHYWGRGQRFGladigegnvYWWGTrnmPAEqakdwrGGKAGIQRLYAGWADEVq 254
Cdd:COG0644 157 PQDYALAIKEHWELPPLEGVDPGAVEFFFGEGAPGG---------YGWVF---PLG------DGRVSVGIPLGGPRPRL- 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 255 avieatpeadisslpaqdrpflerWGDGpVTLLGDAA---HPMltsLGQGAAIAIEDAAVLAHCLATI----DDPQAALR 327
Cdd:COG0644 218 ------------------------VGDG-VLLVGDAAgfvDPL---TGEGIHLAMKSGRLAAEAIAEAleggDFSAEALA 269
|
330
....*....|..
gi 730530280 328 AYENRRRDRARA 339
Cdd:COG0644 270 EYERRLRELLKA 281
|
|
| PRK07588 |
PRK07588 |
FAD-binding domain; |
28-335 |
3.00e-15 |
|
FAD-binding domain;
Pssm-ID: 169028 [Multi-domain] Cd Length: 391 Bit Score: 76.70 E-value: 3.00e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 28 GFEVELYERARELRAVGSALSLMPNALTALERVGVRPDLtRAQTFD--SLRFLTRRGRPIRAIDFGGLARQLGQPSLAIH 105
Cdd:PRK07588 23 GHEPTLIERAPELRTGGYMVDFWGVGYEVAKRMGITDQL-REAGYQieHVRSVDPTGRRKADLNVDSFRRMVGDDFTSLP 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 106 RASLQQALLEqARDCRIE--LGVSATGYLRHADGegVTVLCSDGREVHADVLIGADGFNSAIRATMTGPERPTDwHYViw 183
Cdd:PRK07588 102 RGDLAAAIYT-AIDGQVEtiFDDSIATIDEHRDG--VRVTFERGTPRDFDLVIGADGLHSHVRRLVFGPERDFE-HYL-- 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 184 ratpafrHPKVTPGYVAHYWGRGQRFGLADIGEG----NVYWWGTRNM---------------PAEQAKDWRGGKAGiqr 244
Cdd:PRK07588 176 -------GCKVAACVVDGYRPRDERTYVLYNEVGrqvaRVALRGDRTLflfifraehdnppltPAEEKQLLRDQFGD--- 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 245 lyAGWadEVQAVIEATPEADISSLPAQDRPFLERWGDGPVTLLGDAAHPMLTSLGQGAAIAIEDAAVLAHCLA-TIDDPQ 323
Cdd:PRK07588 246 --VGW--ETPDILAALDDVEDLYFDVVSQIRMDRWSRGRVALVGDAAACPSLLGGEGSGLAITEAYVLAGELArAGGDHR 321
|
330
....*....|..
gi 730530280 324 AALRAYENRRRD 335
Cdd:PRK07588 322 RAFDAYEKRLRP 333
|
|
| mhpA |
PRK06183 |
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase; |
53-366 |
6.12e-14 |
|
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
Pssm-ID: 235727 [Multi-domain] Cd Length: 500 Bit Score: 73.02 E-value: 6.12e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 53 ALTALERVGVRPDLTRAQT-FDSLRFLTRRGRPIRAIDFGGLARQlGQP-SLAIHRASLQQAL---LEQARDCRIELGVS 127
Cdd:PRK06183 58 ALRVLQAIGLADEVLPHTTpNHGMRFLDAKGRCLAEIARPSTGEF-GWPrRNAFHQPLLEAVLragLARFPHVRVRFGHE 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 128 ATGYLRHADGEGVTVLCSDG--REVHADVLIGADGFNSAIR----ATMTGPERPTDWhYVIWRATpafRHPKVTPGYVAH 201
Cdd:PRK06183 137 VTALTQDDDGVTVTLTDADGqrETVRARYVVGCDGANSFVRrtlgVPFEDLTFPERW-LVVDVLI---ANDPLGGPHTYQ 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 202 YwgrgqrfglAD---------IGEGnVYWWGTRNMPAEQAKDWRGgKAGIQRLYAGWADEVQAVI-----EATPEADISs 267
Cdd:PRK06183 213 Y---------CDparpytsvrLPHG-RRRWEFMLLPGETEEQLAS-PENVWRLLAPWGPTPDDAElirhaVYTFHARVA- 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 268 lpaqdrpflERWGDGPVTLLGDAAHPMLTSLGQGAAIAIEDAAVLAHCLATI---DDPQAALRAYENRRRDRARAMVETS 344
Cdd:PRK06183 281 ---------DRWRSGRVLLAGDAAHLMPPFAGQGMNSGIRDAANLAWKLAAVlrgRAGDALLDTYEQERRPHARAMIDLA 351
|
330 340
....*....|....*....|..
gi 730530280 345 RALSRIEQLEHPLRTVARDLYF 366
Cdd:PRK06183 352 VRLGRVICPTDRLAAALRDAVL 373
|
|
| PRK07045 |
PRK07045 |
putative monooxygenase; Reviewed |
1-348 |
6.70e-12 |
|
putative monooxygenase; Reviewed
Pssm-ID: 136171 [Multi-domain] Cd Length: 388 Bit Score: 66.47 E-value: 6.70e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 1 MSRHPLKIVIAGAGIGGLAAAACLKAAGFEVELYERARELRAVGSALSLMPNALTALERVGVRPDLTRAQTF--DSLRfL 78
Cdd:PRK07045 1 MKNNPVDVLINGSGIAGVALAHLLGARGHSVTVVERAARNRAQNGADLLKPSGIGVVRAMGLLDDVFAAGGLrrDAMR-L 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 79 TRRGRPIRAIDFGGlARQLG----QPSLAIHRASLQQALLEQARDCRIELGVSATGylRHADGEGVTVLCSDGREVHADV 154
Cdd:PRK07045 80 YHDKELIASLDYRS-ASALGyfilIPCEQLRRLLLAKLDGLPNVRLRFETSIERIE--RDADGTVTSVTLSDGERVAPTV 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 155 LIGADGFNSAIRATMTgperptdwhyviwrATPAFRHPKVTP---GYVAHYWGRGQRFGL-ADIGEGNVYWW-----GTR 225
Cdd:PRK07045 157 LVGADGARSMIRDDVL--------------RMPAERVPYATPmafGTIALTDSVRECNRLyVDSNQGLAYFYpigdqATR 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 226 ---NMPAEQAKDW----RGGK--AGIQRLYAGWADEVQAVIEATPEADISSLpaqDRPFLERWGDGPVTLLGDAAHPMLT 296
Cdd:PRK07045 223 lvvSFPADEMQGYladtTRTKllARLNEFVGDESADAMAAIGAGTAFPLIPL---GRMNLDRYHKRNVVLLGDAAHSIHP 299
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 730530280 297 SLGQGAAIAIEDAAVLAHCL-------ATIDDpqaALRAYENRRRDRARAMVETSRALS 348
Cdd:PRK07045 300 ITGQGMNLAIEDAGELGACLdlhlsgqIALAD---ALERFERIRRPVNEAVISYGHALA 355
|
|
| FAD_binding_3 |
pfam01494 |
FAD binding domain; This domain is involved in FAD binding in a number of enzymes. |
134-344 |
2.59e-11 |
|
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
Pssm-ID: 396193 [Multi-domain] Cd Length: 348 Bit Score: 64.27 E-value: 2.59e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 134 HADGEGVTVLCSDGR-----EVHADVLIGADGFNSAIRAT----MTGPER-PTDWHYVIWRATPAfrhPKVTPGYVAHYW 203
Cdd:pfam01494 127 EQDGDGVTAVVRDRRdgeeyTVRAKYLVGCDGGRSPVRKTlgieFEGFEGvPFGSLDVLFDAPDL---SDPVERAFVHYL 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 204 -----GRGQRFG-LADIGEGNVYW---WGTRNMPAEQAKDWRGGKAGIQRLyAGWADevqavIEATPEaDISSLPAQDRp 274
Cdd:pfam01494 204 iyaphSRGFMVGpWRSAGRERYYVqvpWDEEVEERPEEFTDEELKQRLRSI-VGIDL-----ALVEIL-WKSIWGVASR- 275
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 730530280 275 FLERWGDGPVTLLGDAAHPMLTSLGQGAAIAIEDAAVLAHCLA---TIDDPQAALRAYENRRRDRARAMVETS 344
Cdd:pfam01494 276 VATRYRKGRVFLAGDAAHIHPPTGGQGLNTAIQDAFNLAWKLAavlRGQAGESLLDTYSAERLPVAWAVVDFA 348
|
|
| PRK06185 |
PRK06185 |
FAD-dependent oxidoreductase; |
121-349 |
4.64e-11 |
|
FAD-dependent oxidoreductase;
Pssm-ID: 235729 [Multi-domain] Cd Length: 407 Bit Score: 63.72 E-value: 4.64e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 121 RIELGVSATGYLRhaDGE---GVTVLCSDGR-EVHADVLIGADGFNSAIRAtMTGPER-----PTDwhyVIWratpaFRH 191
Cdd:PRK06185 125 TLRMGAEVTGLIE--EGGrvtGVRARTPDGPgEIRADLVVGADGRHSRVRA-LAGLEVrefgaPMD---VLW-----FRL 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 192 PKVT--PGYVAHYWGRGQRFGLADIGEgnvYWWGTRNMPAEQAKDWRggKAGIQRLYAgwadevqAVIEATPEA------ 263
Cdd:PRK06185 194 PREPddPESLMGRFGPGQGLIMIDRGD---YWQCGYVIPKGGYAALR--AAGLEAFRE-------RVAELAPELadrvae 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 264 -----DISSLPAQ-DRpfLERWG-DGpVTLLGDAAHPMLTSLGQGAAIAIEDAAVLAHCLA------TIDDpqAALRAYE 330
Cdd:PRK06185 262 lkswdDVKLLDVRvDR--LRRWHrPG-LLCIGDAAHAMSPVGGVGINLAIQDAVAAANILAeplrrgRVSD--RDLAAVQ 336
|
250
....*....|....*....
gi 730530280 331 NRRRDRARAMVETSRALSR 349
Cdd:PRK06185 337 RRREFPTRVTQALQRRIQR 355
|
|
| PRK05714 |
PRK05714 |
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional |
109-358 |
1.27e-08 |
|
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Pssm-ID: 168201 [Multi-domain] Cd Length: 405 Bit Score: 56.38 E-value: 1.27e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 109 LQQALLEQARDCRIELGVSAT-GYLRHAdGEGVTVLCSDGREVHADVLIGADGFNSAIRATMTGPERptDWHYViwratp 187
Cdd:PRK05714 114 VQDALLERLHDSDIGLLANARlEQMRRS-GDDWLLTLADGRQLRAPLVVAADGANSAVRRLAGCATR--EWDYL------ 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 188 afRHPKVTP--GYVAHYWGRGQRFG-------LADIGEGNVYW----WGTRNMPAEQ--AKDWRGGKAGIQRLYAGwadE 252
Cdd:PRK05714 185 --HHAIVTSvrCSEPHRATAWQRFTddgplafLPLERDGDEHWcsivWSTTPEEAERlmALDDDAFCAALERAFEG---R 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 253 VQAVIEATPEADIsslPAQDRpFLERWGDGPVTLLGDAAHPMLTSLGQGAAIAIEDAAVLAHCLAtiddpQAALRA---- 328
Cdd:PRK05714 260 LGEVLSADPRLCV---PLRQR-HAKRYVEPGLALIGDAAHTIHPLAGQGVNLGFLDAAVLAEVLL-----HAAERGerla 330
|
250 260 270
....*....|....*....|....*....|....*...
gi 730530280 329 -------YENRRRDRARAMVETSRALSRIEQLEH-PLR 358
Cdd:PRK05714 331 dvrvlsrFERRRMPHNLALMAAMEGFERLFQADPlPLR 368
|
|
| PRK08255 |
PRK08255 |
bifunctional salicylyl-CoA 5-hydroxylase/oxidoreductase; |
277-334 |
2.63e-08 |
|
bifunctional salicylyl-CoA 5-hydroxylase/oxidoreductase;
Pssm-ID: 236203 [Multi-domain] Cd Length: 765 Bit Score: 55.72 E-value: 2.63e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 730530280 277 ERW----GDGPVTLLGDAAHPMLTSLGQGAAIAIEDAAVLAHCLATIDDP-QAALRAYENRRR 334
Cdd:PRK08255 260 ERWvhwnRRVPVVLMGDAAHTAHFSIGSGTKLALEDAIELARCLHEHPGDlPAALAAYEEERR 322
|
|
| PRK06126 |
PRK06126 |
hypothetical protein; Provisional |
80-334 |
1.72e-07 |
|
hypothetical protein; Provisional
Pssm-ID: 235704 [Multi-domain] Cd Length: 545 Bit Score: 53.07 E-value: 1.72e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 80 RRGRPIRAIDFGGLARQLGqpslaiHRAS---LQQALLEQAR---DCRIELGVSATGYLRHADGEGVTVLCSDG---REV 150
Cdd:PRK06126 102 EAITPVGGPDGSWPSPELP------HRIPqkyLEPILLEHAAaqpGVTLRYGHRLTDFEQDADGVTATVEDLDGgesLTI 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 151 HADVLIGADGFNSAIR----ATMTGPERPTDWHYVIWRAtPAF--RHPKvTPGYvaHYWGRG-QRFGLADIGEGNVYWWG 223
Cdd:PRK06126 176 RADYLVGCDGARSAVRrslgISYEGTSGLQRDLSIYIRA-PGLaaLVGH-DPAW--MYWLFNpDRRGVLVAIDGRDEWLF 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 224 TRNMPAEQAKDWRGgkagiqrlyAGWADEVQAVI-EATPEADISSLPAQDRPFL-ERWGDGPVTLLGDAAHPMLTSLGQG 301
Cdd:PRK06126 252 HQLRGGEDEFTIDD---------VDARAFVRRGVgEDIDYEVLSVVPWTGRRLVaDSYRRGRVFLAGDAAHLFTPTGGYG 322
|
250 260 270
....*....|....*....|....*....|....*.
gi 730530280 302 AAIAIEDAAVLAHCLATIDD---PQAALRAYENRRR 334
Cdd:PRK06126 323 MNTGIGDAVNLAWKLAAVLNgwaGPALLDSYEAERR 358
|
|
| PRK07608 |
PRK07608 |
UbiH/UbiF family hydroxylase; |
57-368 |
1.78e-07 |
|
UbiH/UbiF family hydroxylase;
Pssm-ID: 181057 [Multi-domain] Cd Length: 388 Bit Score: 52.65 E-value: 1.78e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 57 LERVGVRP--DLTRAQTFDSLRFltrRGRPIRAIDFGglARQLGQPSLA-IHRASLQQALLEQARDCRIEL---GVSATG 130
Cdd:PRK07608 62 LERLGVWQalDAARLAPVYDMRV---FGDAHARLHFS--AYQAGVPQLAwIVESSLIERALWAALRFQPNLtwfPARAQG 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 131 YLRHADGegVTVLCSDGREVHADVLIGADGFNSAIRATMTGPERPTDWHYViwratpafrhpkvtpGYVAHY-WGRGQRf 209
Cdd:PRK07608 137 LEVDPDA--ATLTLADGQVLRADLVVGADGAHSWVRSQAGIKAERRPYRQT---------------GVVANFkAERPHR- 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 210 gladigeGNVYWWGTRN-------MPAEQ-AKDWRGGKAGIQRLYAGWADEVQAVIEATPEADISSL----PAQDRPF-- 275
Cdd:PRK07608 199 -------GTAYQWFRDDgilallpLPDGHvSMVWSARTAHADELLALSPEALAARVERASGGRLGRLecvtPAAGFPLrl 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 276 --LERWGDGPVTLLGDAAHPMLTSLGQGAAIAIEDAAVLAHCLATIDDPQAA-----LRAYENRRRDRARAMVETSRALS 348
Cdd:PRK07608 272 qrVDRLVAPRVALVGDAAHLIHPLAGQGMNLGLRDVAALADVLAGREPFRDLgdlrlLRRYERARREDILALQVATDGLQ 351
|
330 340
....*....|....*....|
gi 730530280 349 RIEQLEHPLRTVARDLYFRF 368
Cdd:PRK07608 352 RLFALPGPLARWLRNAGMAL 371
|
|
| PRK05868 |
PRK05868 |
FAD-binding protein; |
7-329 |
1.92e-06 |
|
FAD-binding protein;
Pssm-ID: 180297 [Multi-domain] Cd Length: 372 Bit Score: 49.60 E-value: 1.92e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 7 KIVIAGAGIGGLAAAACLKAAGFEVELYERARELRAVGSALSLMPNALTALERVGVRPDLTRAQT-FDSLRFLTRRG--- 82
Cdd:PRK05868 3 TVVVSGASVAGTAAAYWLGRHGYSVTMVERHPGLRPGGQAIDVRGPALDVLERMGLLAAAQEHKTrIRGASFVDRDGnel 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 83 -RPIRAIDFGGlarQLGQPSLAIHRASLQQaLLEQARDCRIELGVSATGYLRHADGEGVTVLCSDGREVHADVLIGADGF 161
Cdd:PRK05868 83 fRDTESTPTGG---PVNSPDIELLRDDLVE-LLYGATQPSVEYLFDDSISTLQDDGDSVRVTFERAAAREFDLVIGADGL 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 162 NSAIRATMTGPERptdwHYVIWRATPAFRHpkVTPGYVA-HYWgrgQRFGLADIGEGNVYwwGTRN----------MPAE 230
Cdd:PRK05868 159 HSNVRRLVFGPEE----QFVKRLGTHAAIF--TVPNFLElDYW---QTWHYGDSTMAGVY--SARNntearaalafMDTE 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 231 QAKDWRGGKAGIQRLYAGWADE--VQA-VIEATPEADISSLPAQDRPFLERWGDGPVTLLGDAAHPMLTSLGQGAAIAIE 307
Cdd:PRK05868 228 LRIDYRDTEAQFAELQRRMAEDgwVRAqLLHYMRSAPDFYFDEMSQILMDRWSRGRVALVGDAGYCCSPLSGQGTSVALL 307
|
330 340
....*....|....*....|...
gi 730530280 308 DAAVLAHCLATI-DDPQAALRAY 329
Cdd:PRK05868 308 GAYILAGELKAAgDDYQLGFANY 330
|
|
| Ubi-OHases |
TIGR01988 |
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a ... |
14-369 |
3.46e-06 |
|
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) making it difficult to ascribe a specific activity to each one. Eukaryotes appear to have only a single homolog in this subfamily (COQ6) which complements UbiH, but also possess a non-orthologous gene, COQ7 which complements UbiF. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]
Pssm-ID: 273913 [Multi-domain] Cd Length: 385 Bit Score: 48.74 E-value: 3.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 14 GIGGLAAAACLKAAGFEVELYERARELRAVGS-----ALSLMPNALTALERVGVRPDL--TRAQTFDSLRFLTRRGRpiR 86
Cdd:TIGR01988 8 GMVGLALALALARSGLKVALIEATPLPAPADPgfdnrVSALSAASIRLLEKLGVWDKIepARAQPIRDIHVSDGGSF--G 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 87 AIDFGglARQLGQPSLA--IHRASLQQALLEQARDCR---IELGVSATGYLRHADgeGVTVLCSDGREVHADVLIGADGF 161
Cdd:TIGR01988 86 ALRFD--ADEIGLEALGyvVENRVLQQALWERLQELPnvtLLCPARVVELPRHSD--HVELTLDDGQQLRARLLVGADGA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 162 NSAIRATMTGPERPTDW--HYVIwratpAFRHPKVTPGYVAHywgrgQRFG---------LADIGEGNVywWGTRNMPAE 230
Cdd:TIGR01988 162 NSKVRQLAGIPTTGWDYgqSAVV-----ANVKHERPHQGTAW-----ERFTptgplallpLPDNRSSLV--WTLPPEEAE 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 231 QAKDW--RGGKAGIQRLYAGWADEVQAVIEatpeadISSLPAQ----DRPFLERwgdgpVTLLGDAAHPMLTSLGQGAAI 304
Cdd:TIGR01988 230 RLLALsdEEFLAELQRAFGSRLGAITLVGE------RHAFPLSlthaKRYVAPR-----LALIGDAAHTIHPLAGQGLNL 298
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 730530280 305 AIEDAAVLAHCLAT-------IDDPqAALRAYENRRRDRARAMVETSRALSRIEQLEHPLRTVARDLYFRFA 369
Cdd:TIGR01988 299 GLRDVAALAEVLEDarrrgedIGSL-RVLQRYERRRRFDNAAMLGATDGLNRLFSNDFPPLRLLRNLGLRLL 369
|
|
| PRK07364 |
PRK07364 |
FAD-dependent hydroxylase; |
97-334 |
1.38e-05 |
|
FAD-dependent hydroxylase;
Pssm-ID: 236001 [Multi-domain] Cd Length: 415 Bit Score: 46.94 E-value: 1.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 97 LGQPSL---AIHRAsLQQALLEQARDC-RIELGVSATGYLRHADGEGVTV-LCSDGRE--VHADVLIGADGFNSAIRatm 169
Cdd:PRK07364 109 LGTEALgyvGEHQV-LLEALQEFLQSCpNITWLCPAEVVSVEYQQDAATVtLEIEGKQqtLQSKLVVAADGARSPIR--- 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 170 TGPERPTD-WHYviWR----ATPAFRHPKVTPGYvAHYWGRGQrFGLADIgEGN---VYWwgtrNMPAEQAK-----DWR 236
Cdd:PRK07364 185 QAAGIKTKgWKY--WQscvtATVKHEAPHNDIAY-ERFWPSGP-FAILPL-PGNrcqIVW----TAPHAQAKallalPEA 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 237 GGKAGIQRLYAGWADEVQAVieatpeADISSLPAQ----DRPFLERwgdgpVTLLGDAAHPMLTSLGQGAAIAIEDAAVL 312
Cdd:PRK07364 256 EFLAELQQRYGDQLGKLELL------GDRFLFPVQlmqsDRYVQHR-----LALVGDAAHCCHPVGGQGLNLGIRDAAAL 324
|
250 260
....*....|....*....|....*....
gi 730530280 313 AHCLAT-------IDDpQAALRAYENRRR 334
Cdd:PRK07364 325 AQVLQTahqrgedIGS-LAVLKRYERWRK 352
|
|
| COQ6 |
TIGR01989 |
ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase ... |
140-374 |
1.98e-05 |
|
ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase responsible for the 4-hydroxylateion of the phenol ring in the aerobic biosynthesis of ubiquinone
Pssm-ID: 273914 [Multi-domain] Cd Length: 437 Bit Score: 46.29 E-value: 1.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 140 VTVLCSDGREVHADVLIGADGFNSAIRATMTGPErpTDWHYVIWRATPAFRHPKVTPGYVAhyWgrgQRF------GLAD 213
Cdd:TIGR01989 160 VHITLSDGQVLYTKLLIGADGSNSNVRKAANIDT--TGWNYNQHAVVATLKLEEATENDVA--W---QRFlptgpiALLP 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 214 IGEGNV-YWWGTRN--------MPAEQ---------AKDWRggkagiQRLYAGWADE-VQAVIEA----TPEADIS---- 266
Cdd:TIGR01989 233 LPDNNStLVWSTSPeealrllsLPPEDfvdalnaafDLGYS------DHPYSYLLDYaMEKLNEDigfrTEGSKSCfqvp 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 267 ----------------SLPAQDRPFLERwgdgpVTLLGDAAHPMLTSLGQGAAIAIEDAAVLAHCLAT-------IDDPQ 323
Cdd:TIGR01989 307 prvigvvdksraafplGLGHADEYVTKR-----VALVGDAAHRVHPLAGQGVNLGFGDVASLVKALAEavsvgadIGSIS 381
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 730530280 324 aALRAYENRRRDRARAMVETSRALSRIEQLEHP----LRTVARDLYFRFAPERTF 374
Cdd:TIGR01989 382 -SLKPYERERYAKNVVLLGLVDKLHKLYATDFPpvvaLRTFGLNLTNYIGPLKNF 435
|
|
| PRK07333 |
PRK07333 |
ubiquinone biosynthesis hydroxylase; |
107-166 |
1.49e-04 |
|
ubiquinone biosynthesis hydroxylase;
Pssm-ID: 180935 [Multi-domain] Cd Length: 403 Bit Score: 43.43 E-value: 1.49e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 730530280 107 ASLQQALLEQARDCRIEL--GVSATGYlrHADGEGVTVLCSDGREVHADVLIGADGFNSAIR 166
Cdd:PRK07333 111 RVLINALRKRAEALGIDLreATSVTDF--ETRDEGVTVTLSDGSVLEARLLVAADGARSKLR 170
|
|
| PRK08850 |
PRK08850 |
2-octaprenyl-6-methoxyphenol hydroxylase; Validated |
284-377 |
1.62e-04 |
|
2-octaprenyl-6-methoxyphenol hydroxylase; Validated
Pssm-ID: 236341 [Multi-domain] Cd Length: 405 Bit Score: 43.61 E-value: 1.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 730530280 284 VTLLGDAAHPMLTSLGQGAAIAIEDAAVLAHCLATIDDP------QAALRAYENRRRDRARAMVETSRALSRIEQLEHPL 357
Cdd:PRK08850 284 VALVGDAAHTIHPLAGQGVNLGLLDAASLAQEILALWQQgrdiglKRNLRGYERWRKAEAAKMIAAMQGFRDLFSGSNPA 363
|
90 100
....*....|....*....|
gi 730530280 358 RTVARDLYFRFAPERTFARQ 377
Cdd:PRK08850 364 KKLVRGIGMSLAGQLPGAKD 383
|
|
| |
