23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH, partial [Pseudomonas aeruginosa]
Protein Classification
RNA methyltransferase( domain architecture ID 1000317)
SpoU family RNA methyltransferase catalyzes the methylation of rRNA or tRNA at specific sites in a S-adenosyl-L-methionine (SAM)-dependent manner
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| SPOUT_MTase super family | cl38912 | SPOUT superfamily of SAM-dependent RNA methyltransferases; The SPOUT (SpoU-TrmD) ... |
1-69 | 6.44e-23 | ||
SPOUT superfamily of SAM-dependent RNA methyltransferases; The SPOUT (SpoU-TrmD) methyltransferase (MTase) superfamily, also known as class IV methyltransferase family, is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot. Members of the SPOUT superfamily that have been characterized functionally are involved in post-transcriptional RNA modification by catalyzing methylation of the 2-OH group of ribose, the N-1 atom of guanosine 37 in tRNA, or the N-3 atom of uridine 1498 in 16S rRNA. The actual alignment was detected with superfamily member TIGR00246: Pssm-ID: 476814 Cd Length: 153 Bit Score: 84.98 E-value: 6.44e-23
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| Name | Accession | Description | Interval | E-value | ||
| tRNA_RlmH_YbeA | TIGR00246 | rRNA large subunit m3Psi methyltransferase RlmH; This protein, in the SPOUT methyltransferase ... |
1-69 | 6.44e-23 | ||
rRNA large subunit m3Psi methyltransferase RlmH; This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA. [Protein synthesis, tRNA and rRNA base modification] Pssm-ID: 129349 Cd Length: 153 Bit Score: 84.98 E-value: 6.44e-23
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| Name | Accession | Description | Interval | E-value | ||
| tRNA_RlmH_YbeA | TIGR00246 | rRNA large subunit m3Psi methyltransferase RlmH; This protein, in the SPOUT methyltransferase ... |
1-69 | 6.44e-23 | ||
rRNA large subunit m3Psi methyltransferase RlmH; This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA. [Protein synthesis, tRNA and rRNA base modification] Pssm-ID: 129349 Cd Length: 153 Bit Score: 84.98 E-value: 6.44e-23
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