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Conserved domains on  [gi|734847533|ref|WP_034098369|]
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zinc metalloprotease [Flavobacterium psychrophilum]

Protein Classification

zinc metalloprotease( domain architecture ID 10136524)

zinc-dependent metalloprotease similar to ulilysin, a metzincin metalloendopeptidase belonging to the peptidase M43 protein family; metzincin metalloendopeptidases act as broad spectrum protein degraders

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ZnMc_pappalysin_like cd04275
Zinc-dependent metalloprotease, pappalysin_like subfamily. The pregnancy-associated plasma ...
86-320 9.29e-66

Zinc-dependent metalloprotease, pappalysin_like subfamily. The pregnancy-associated plasma protein A (PAPP-A or pappalysin-1) cleaves insulin-like growth factor-binding proteins 4 and 5, thereby promoting cell growth by releasing bound growth factor. This model includes pappalysins and related metalloprotease domains from all three kingdoms of life. The three-dimensional structure of an archaeal representative, ulilysin, has been solved.


:

Pssm-ID: 239802 [Multi-domain]  Cd Length: 225  Bit Score: 206.42  E-value: 9.29e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734847533  86 IEIPMVFNVLYNTAAD---NTSLAQIQSQVDALNKDFNATNSdyntannpyssvRANIGIRFVLDRVIRKQSPKtiWYSE 162
Cdd:cd04275    2 IVIPVYFHVIYNNSAVsggNISDAQITDQIDVLNDDYSGLNA------------GVDLGIEFVLAGTTRTVNSA--WPVF 67
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734847533 163 DGYMKIAAQGGMAPTSPTTKLNVWVVNNLasrtSGQLLGYAQFPGGSSA----TDGYVCGNYCLGtiGTAAAPYNLGRTA 238
Cdd:cd04275   68 AGSGTEDAMKSALRKGGYKYLNIYVANFL----GGGLLGYATFPDSLVSlafiTDGVVINPSSLP--GGSAAPYNLGDTA 141
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734847533 239 THEIGHWMNLRHIWGDGNGC--ASDLVSDTPLHDSPNFGVPAvgHRSTCTGTP-LEMYMNYMDYTDDNAMYMFSLGQKSR 315
Cdd:cd04275  142 THEVGHWLGLYHTFQGGSPCctTGDYVADTPAEASPSYGCPA--GRDTCPGQPgLDPIHNYMDYSDDSCMNEFTPGQVTR 219

                 ....*
gi 734847533 316 MNALF 320
Cdd:cd04275  220 MRSYL 224
 
Name Accession Description Interval E-value
ZnMc_pappalysin_like cd04275
Zinc-dependent metalloprotease, pappalysin_like subfamily. The pregnancy-associated plasma ...
86-320 9.29e-66

Zinc-dependent metalloprotease, pappalysin_like subfamily. The pregnancy-associated plasma protein A (PAPP-A or pappalysin-1) cleaves insulin-like growth factor-binding proteins 4 and 5, thereby promoting cell growth by releasing bound growth factor. This model includes pappalysins and related metalloprotease domains from all three kingdoms of life. The three-dimensional structure of an archaeal representative, ulilysin, has been solved.


Pssm-ID: 239802 [Multi-domain]  Cd Length: 225  Bit Score: 206.42  E-value: 9.29e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734847533  86 IEIPMVFNVLYNTAAD---NTSLAQIQSQVDALNKDFNATNSdyntannpyssvRANIGIRFVLDRVIRKQSPKtiWYSE 162
Cdd:cd04275    2 IVIPVYFHVIYNNSAVsggNISDAQITDQIDVLNDDYSGLNA------------GVDLGIEFVLAGTTRTVNSA--WPVF 67
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734847533 163 DGYMKIAAQGGMAPTSPTTKLNVWVVNNLasrtSGQLLGYAQFPGGSSA----TDGYVCGNYCLGtiGTAAAPYNLGRTA 238
Cdd:cd04275   68 AGSGTEDAMKSALRKGGYKYLNIYVANFL----GGGLLGYATFPDSLVSlafiTDGVVINPSSLP--GGSAAPYNLGDTA 141
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734847533 239 THEIGHWMNLRHIWGDGNGC--ASDLVSDTPLHDSPNFGVPAvgHRSTCTGTP-LEMYMNYMDYTDDNAMYMFSLGQKSR 315
Cdd:cd04275  142 THEVGHWLGLYHTFQGGSPCctTGDYVADTPAEASPSYGCPA--GRDTCPGQPgLDPIHNYMDYSDDSCMNEFTPGQVTR 219

                 ....*
gi 734847533 316 MNALF 320
Cdd:cd04275  220 MRSYL 224
Peptidase_M43 pfam05572
Pregnancy-associated plasma protein-A; Pregnancy-associated plasma protein A (PAPP-A) is a ...
179-321 5.52e-11

Pregnancy-associated plasma protein-A; Pregnancy-associated plasma protein A (PAPP-A) is a metallo-protease belonging to Merops family M43. It cleaves insulin-like growth factor (IGF) binding protein-4 (IGFBP-4), causing a dramatic reduction in its affinity for IGF-I and -II. Through this mechanism, PAPP-A is a regulator of IGF bioactivity in several systems, including the human ovary and the cardiovascular system.


Pssm-ID: 368506  Cd Length: 152  Bit Score: 59.93  E-value: 5.52e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734847533  179 PTTKLNVWVVNNLASRTSGQLlGYAQFPGGSSATDGYVCGNYCLGTIGTAAAPYNLGRTATHEIGHWMNLRHIW-GDGNG 257
Cdd:pfam05572  14 NEKYMNVYIQNDLADGLTNNS-GVAWYPDSGMSADGTARVVFNGAYLAADPTSTNFSSTLTHEFGHFLGLIHTFeGGCER 92
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 734847533  258 CASDLVSDTPLHDSPNFgVPAVGHRSTCTGTPLEmYMNYMDYTDDNAMYmfSLGQKSRMNALFA 321
Cdd:pfam05572  93 GEGDKVPDTPSYTGGEV-SLRNKDLFNCNGEPIN-SQNQMDYNGCYAMF--TQDQVDRMVEVLA 152
 
Name Accession Description Interval E-value
ZnMc_pappalysin_like cd04275
Zinc-dependent metalloprotease, pappalysin_like subfamily. The pregnancy-associated plasma ...
86-320 9.29e-66

Zinc-dependent metalloprotease, pappalysin_like subfamily. The pregnancy-associated plasma protein A (PAPP-A or pappalysin-1) cleaves insulin-like growth factor-binding proteins 4 and 5, thereby promoting cell growth by releasing bound growth factor. This model includes pappalysins and related metalloprotease domains from all three kingdoms of life. The three-dimensional structure of an archaeal representative, ulilysin, has been solved.


Pssm-ID: 239802 [Multi-domain]  Cd Length: 225  Bit Score: 206.42  E-value: 9.29e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734847533  86 IEIPMVFNVLYNTAAD---NTSLAQIQSQVDALNKDFNATNSdyntannpyssvRANIGIRFVLDRVIRKQSPKtiWYSE 162
Cdd:cd04275    2 IVIPVYFHVIYNNSAVsggNISDAQITDQIDVLNDDYSGLNA------------GVDLGIEFVLAGTTRTVNSA--WPVF 67
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734847533 163 DGYMKIAAQGGMAPTSPTTKLNVWVVNNLasrtSGQLLGYAQFPGGSSA----TDGYVCGNYCLGtiGTAAAPYNLGRTA 238
Cdd:cd04275   68 AGSGTEDAMKSALRKGGYKYLNIYVANFL----GGGLLGYATFPDSLVSlafiTDGVVINPSSLP--GGSAAPYNLGDTA 141
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734847533 239 THEIGHWMNLRHIWGDGNGC--ASDLVSDTPLHDSPNFGVPAvgHRSTCTGTP-LEMYMNYMDYTDDNAMYMFSLGQKSR 315
Cdd:cd04275  142 THEVGHWLGLYHTFQGGSPCctTGDYVADTPAEASPSYGCPA--GRDTCPGQPgLDPIHNYMDYSDDSCMNEFTPGQVTR 219

                 ....*
gi 734847533 316 MNALF 320
Cdd:cd04275  220 MRSYL 224
Peptidase_M43 pfam05572
Pregnancy-associated plasma protein-A; Pregnancy-associated plasma protein A (PAPP-A) is a ...
179-321 5.52e-11

Pregnancy-associated plasma protein-A; Pregnancy-associated plasma protein A (PAPP-A) is a metallo-protease belonging to Merops family M43. It cleaves insulin-like growth factor (IGF) binding protein-4 (IGFBP-4), causing a dramatic reduction in its affinity for IGF-I and -II. Through this mechanism, PAPP-A is a regulator of IGF bioactivity in several systems, including the human ovary and the cardiovascular system.


Pssm-ID: 368506  Cd Length: 152  Bit Score: 59.93  E-value: 5.52e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734847533  179 PTTKLNVWVVNNLASRTSGQLlGYAQFPGGSSATDGYVCGNYCLGTIGTAAAPYNLGRTATHEIGHWMNLRHIW-GDGNG 257
Cdd:pfam05572  14 NEKYMNVYIQNDLADGLTNNS-GVAWYPDSGMSADGTARVVFNGAYLAADPTSTNFSSTLTHEFGHFLGLIHTFeGGCER 92
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 734847533  258 CASDLVSDTPLHDSPNFgVPAVGHRSTCTGTPLEmYMNYMDYTDDNAMYmfSLGQKSRMNALFA 321
Cdd:pfam05572  93 GEGDKVPDTPSYTGGEV-SLRNKDLFNCNGEPIN-SQNQMDYNGCYAMF--TQDQVDRMVEVLA 152
ZnMc_ADAM_like cd04267
Zinc-dependent metalloprotease, ADAM_like or reprolysin_like subgroup. The adamalysin_like or ...
94-254 3.21e-09

Zinc-dependent metalloprotease, ADAM_like or reprolysin_like subgroup. The adamalysin_like or ADAM family of metalloproteases contains proteolytic domains from snake venoms, proteases from the mammalian reproductive tract, and the tumor necrosis factor alpha convertase, TACE. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions.


Pssm-ID: 239795  Cd Length: 192  Bit Score: 55.89  E-value: 3.21e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734847533  94 VLYNTAADNTSLAQIQSQVDALNKDfnatnsdyntannpYSSVRANIGIRFVLDRVirkqspkTIWYSEDGYMKIAAQGG 173
Cdd:cd04267   14 VSYFNSDENILQAYITELINIANSI--------------YRSTNLRLGIRISLEGL-------QILKGEQFAPPIDSDAS 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734847533 174 M---------APTSPTTKLNVWVVNNLasRTSGQLLGYAQFPGgssatdgyVCGNY-CLGTIGTAAAPYNLGRTATHEIG 243
Cdd:cd04267   73 NtlnsfsfwrAEGPIRHDNAVLLTAQD--FIEGDILGLAYVGS--------MCNPYsSVGVVEDTGFTLLTALTMAHELG 142
                        170
                 ....*....|.
gi 734847533 244 HWMNLRHIWGD 254
Cdd:cd04267  143 HNLGAEHDGGD 153
ZnMc cd00203
Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major ...
87-319 2.57e-07

Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches, the astacin-like proteases and the adamalysin/reprolysin-like proteases. Both branches have wide phylogenetic distribution, and contain sub-families, which are involved in vertebrate development and disease.


Pssm-ID: 238124 [Multi-domain]  Cd Length: 167  Bit Score: 49.83  E-value: 2.57e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734847533  87 EIPMVFNVLYNTAADNTSLAQIQSQVDALNKDFNATNsdyntannpyssvraniGIRFVLDRVIRKQSPKTIWysedgym 166
Cdd:cd00203    2 VIPYVVVADDRDVEEENLSAQIQSLILIAMQIWRDYL-----------------NIRFVLVGVEIDKADIAIL------- 57
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734847533 167 kiaaqggmaptspttklnvwvvnNLASRTSGQLLGYAQFPGgssatdgyVCGNYcLGTIGTAAAPYN---LGRTATHEIG 243
Cdd:cd00203   58 -----------------------VTRQDFDGGTGGWAYLGR--------VCDSL-RGVGVLQDNQSGtkeGAQTIAHELG 105
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734847533 244 HWMNLRHIWGDGNGCASDLVSDTPLhdspnfgvpavghrSTCTGtplemYMNYMDYTDDNA----MYMFSLGQKSRMNAL 319
Cdd:cd00203  106 HALGFYHDHDRKDRDDYPTIDDTLN--------------AEDDD-----YYSVMSYTKGSFsdgqRKDFSQCDIDQINKL 166
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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