|
Name |
Accession |
Description |
Interval |
E-value |
| ARO8 |
COG1167 |
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain ... |
10-499 |
0e+00 |
|
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain [Transcription, Amino acid transport and metabolism]; DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain is part of the Pathway/BioSystem: Lysine biosynthesis
Pssm-ID: 440781 [Multi-domain] Cd Length: 471 Bit Score: 522.47 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 10 LSARIDRSSPEPMYRQLLQLMQQAILTGELGPGTKLPSSRTLAGDLSIARNTVLHVYDQLTAEGYVLTTTGSGTYVADTR 89
Cdd:COG1167 1 MLIRLDRDSSGPLYLQLADALREAILSGRLPPGDRLPSSRELAAQLGVSRSTVVRAYEELEAEGLIESRPGSGTFVAARL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 90 PDAAairvpgatPPPSAADELPAPDaqgslsmrgrqlIEHAGVSRRQWGAFMPGVPDVSEFPSRTWSRLQARLWKEANPE 169
Cdd:COG1167 81 PAPA--------PAPRAAAAVAAPA------------LRRLLEAAPGVIDLGSGAPDPDLFPLAALRRALRRALRRLPPA 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 170 LLTYAPGGGYRPLRRALADYLRvARSVKCSPDQVIITTGIHQSIDLAVRLLSDIGDRAWVEEPCYWGVRSVLQAAGLTLA 249
Cdd:COG1167 141 LLGYGDPQGLPELREAIARYLA-RRGVPASPDQILITSGAQQALDLALRALLRPGDTVAVESPTYPGALAALRAAGLRLV 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 250 PVPVDQEGLDPRASDM---QHPPRLVLVTPSHQYPLGMVMSLARRRMLLEYARQHRCWIIEDDYDSEFRYGSRPLASLQG 326
Cdd:COG1167 220 PVPVDEDGLDLDALEAalrRHRPRAVYVTPSHQNPTGATMSLERRRALLELARRHGVPIIEDDYDSELRYDGRPPPPLAA 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 327 LDDGGRVIYVGSLGKMLFPGLRMGYMVVPEHLVDTFRTGLSELYREGQLMQQAVLAEFIMDGHLTSHVRRMRTLYGERRQ 406
Cdd:COG1167 300 LDAPGRVIYIGSFSKTLAPGLRLGYLVAPGRLIERLARLKRATDLGTSPLTQLALAEFLESGHYDRHLRRLRREYRARRD 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 407 LMIDAIRARFGEALPVMGDEAGLHLVLGLPDACDDRAVTQSAFDAGVIVRPLTSYYSNlDTARQGLLLGYACVAHEGIRP 486
Cdd:COG1167 380 LLLAALARHLPDGLRVTGPPGGLHLWLELPEGVDAEALAAAALARGILVAPGSAFSAD-GPPRNGLRLGFGAPSEEELEE 458
|
490
....*....|...
gi 736059228 487 AFDTLADTIEQHL 499
Cdd:COG1167 459 ALRRLAELLRELA 471
|
|
| AAT_like |
cd00609 |
Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent ... |
143-493 |
4.87e-69 |
|
Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein.
Pssm-ID: 99734 [Multi-domain] Cd Length: 350 Bit Score: 224.91 E-value: 4.87e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 143 GVPDVSEFPSRTWsrlqARLWKEANPELLTYAPGGGYRPLRRALADYLRVARSVKCSPDQVIITTGIHQSIDLAVRLLSD 222
Cdd:cd00609 6 GEPDFPPPPEVLE----ALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 223 IGDRAWVEEPCYWGVRSVLQAAGLTLAPVPVDQEGLDPRASDM-----QHPPRLVLVTPsHQYPLGMVMSLARRRMLLEY 297
Cdd:cd00609 82 PGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELleaakTPKTKLLYLNN-PNNPTGAVLSEEELEELAEL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 298 ARQHRCWIIEDDYDSEFRYGSRPLASLQGLDDGGRVIYVGSLGKML-FPGLRMGYMVVPEHLVDTFRTGLSELYREGQ-L 375
Cdd:cd00609 161 AKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFgLPGLRIGYLIAPPEELLERLKKLLPYTTSGPsT 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 376 MQQAVLAEFIMDGHltSHVRRMRTLYGERRQLMIDAIRARFGEAlpVMGDEAGLHLVLGLPDACDDRAVTQSAFDAGVIV 455
Cdd:cd00609 241 LSQAAAAAALDDGE--EHLEELRERYRRRRDALLEALKELGPLV--VVKPSGGFFLWLDLPEGDDEEFLERLLLEAGVVV 316
|
330 340 350
....*....|....*....|....*....|....*...
gi 736059228 456 RPLTSYYSNLDtarQGLLLGYACVaHEGIRPAFDTLAD 493
Cdd:cd00609 317 RPGSAFGEGGE---GFVRLSFATP-EEELEEALERLAE 350
|
|
| AspB |
COG0436 |
Aspartate/methionine/tyrosine aminotransferase [Amino acid transport and metabolism]; ... |
173-498 |
2.55e-33 |
|
Aspartate/methionine/tyrosine aminotransferase [Amino acid transport and metabolism]; Aspartate/methionine/tyrosine aminotransferase is part of the Pathway/BioSystem: Isoleucine, leucine, valine biosynthesis
Pssm-ID: 440205 [Multi-domain] Cd Length: 387 Bit Score: 130.25 E-value: 2.55e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 173 YAPGGGYRPLRRALADYLRVARSVKCSPDQVIITTGIHQSIDLAVRLLSDIGDRAWVEEPCYWGVRSVLQAAGLTLAPVP 252
Cdd:COG0436 63 YTPSAGIPELREAIAAYYKRRYGVDLDPDEILVTNGAKEALALALLALLNPGDEVLVPDPGYPSYRAAVRLAGGKPVPVP 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 253 VDQE-GLDPRASDMQ--HPPR---LVLVTPSHqyPLGMVMSLARRRMLLEYARQHRCWIIEDD-YdSEFRYGSRP---LA 322
Cdd:COG0436 143 LDEEnGFLPDPEALEaaITPRtkaIVLNSPNN--PTGAVYSREELEALAELAREHDLLVISDEiY-EELVYDGAEhvsIL 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 323 SLQGLDDggRVIYVGSLGKML-FPGLRMGYMVVPEHLVDTFRTGLSEL-YREGQLMQQAVLAEFimdGHLTSHVRRMRTL 400
Cdd:COG0436 220 SLPGLKD--RTIVINSFSKSYaMTGWRIGYAVGPPELIAALLKLQSNLtSCAPTPAQYAAAAAL---EGPQDYVEEMRAE 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 401 YGERRQLMIDAIRA-RFGEALPvmgdEAGLHLVLGLPDA-CDDRAVTQSA-FDAGVIVRPLTSYYSNLDtarqglllGYA 477
Cdd:COG0436 295 YRRRRDLLVEGLNEiGLSVVKP----EGAFYLFADVPELgLDSEEFAERLlEEAGVAVVPGSAFGPAGE--------GYV 362
|
330 340
....*....|....*....|....*
gi 736059228 478 ----CVAHEGIRPAFDTLADTIEQH 498
Cdd:COG0436 363 risyATSEERLEEALERLARFLERY 387
|
|
| Aminotran_1_2 |
pfam00155 |
Aminotransferase class I and II; |
163-462 |
6.31e-29 |
|
Aminotransferase class I and II;
Pssm-ID: 395103 [Multi-domain] Cd Length: 351 Bit Score: 117.02 E-value: 6.31e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 163 WKEANPELLT------YAPGGGYRPLRRALADYLRVARSVKCSP-DQVIITTGIHQSIDLAVRLLSDIGDRAWVEEPCYW 235
Cdd:pfam00155 19 VAKAEKDALAggtrnlYGPTDGHPELREALAKFLGRSPVLKLDReAAVVFGSGAGANIEALIFLLANPGDAILVPAPTYA 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 236 GVRSVLQAAGLTLAPVPVDQEglDPRASDMQH-------PPRLVLVT-PSHqyPLGMVMSLARRRMLLEYARQHRCWIIE 307
Cdd:pfam00155 99 SYIRIARLAGGEVVRYPLYDS--NDFHLDFDAleaalkeKPKVVLHTsPHN--PTGTVATLEELEKLLDLAKEHNILLLV 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 308 DDYDSEFRYGS-RPLASLQGLDDGGRVIYVGSLGK-MLFPGLRMGYMVVPEHLVDTFRTGLSELYREGQLmqQAVLAEFI 385
Cdd:pfam00155 175 DEAYAGFVFGSpDAVATRALLAEGPNLLVVGSFSKaFGLAGWRVGYILGNAAVISQLRKLARPFYSSTHL--QAAAAAAL 252
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 736059228 386 MDGHLT-SHVRRMRTLYGERRQLMIDAIRARfgeALPVMGDEAGLHLVLGLPDACDDRAVTQSAFDAGVIVRPLTSYY 462
Cdd:pfam00155 253 SDPLLVaSELEEMRQRIKERRDYLRDGLQAA---GLSVLPSQAGFFLLTGLDPETAKELAQVLLEEVGVYVTPGSSPG 327
|
|
| PRK15481 |
PRK15481 |
transcriptional regulatory protein PtsJ; Provisional |
32-456 |
1.39e-26 |
|
transcriptional regulatory protein PtsJ; Provisional
Pssm-ID: 185378 [Multi-domain] Cd Length: 431 Bit Score: 111.68 E-value: 1.39e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 32 QAILTGELGPGTKLPSSRTLAGDLSIARNTVLHVYDQLTAEGYVLTTTGSGTyvadtrpdaaAIRvpgatpppsaadELP 111
Cdd:PRK15481 16 QLIQAGRLRPGDSLPPVRELASELGVNRNTVAAAYKRLVTAGLAQSQGRNGT----------VIR------------GSP 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 112 APDAQ-GSLSmrGRQLIEHAGvsrrqwgafmpGVPDVSEFP--SRTWSRLQA--RLWKEA--NPELLTYApgggyrplRR 184
Cdd:PRK15481 74 SPVALeGGDP--GTPLHDLAG-----------GNPDPQRLPdlSRYFARLSRtpRLYGDApvSPELHAWA--------AR 132
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 185 ALADYLRVARSVKcspdqviITTGihqSIDLAVRLLSDI---GDRAWVEEPCYWGVRSVLQAAGLTLAPVPVDQEGLDPR 261
Cdd:PRK15481 133 WLRDDCPVAFEID-------LTSG---AIDAIERLLCAHllpGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAEGMQPE 202
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 262 --ASDMQHPPRLVLVTPSHQYPLGMVMSLAR----RRMLLEYArqHRCWIIEDDYD--SEFRYGSrPLASlqgldDGGRV 333
Cdd:PRK15481 203 klERALAQGARAVILTPRAHNPTGCSLSARRaaalRNLLARYP--QVLVIIDDHFAllSSSPYHS-VIPQ-----TTQRW 274
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 334 IYVGSLGKMLFPGLRMGYMVVPEHLVDTFRTGLSelyrEG-----QLMQQAVLAefimdgHLTS--HVRRM---RTLYGE 403
Cdd:PRK15481 275 ALIRSVSKALGPDLRLAFVASDSATSARLRLRLN----SGtqwvsHLLQDLVYA------CLTDpeYQARLaqaRLFYAQ 344
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 736059228 404 RRQLMIDAIRARfGEALPVMGDeaGLHLVLGLPdaCDDRAVTQSAFDAGVIVR 456
Cdd:PRK15481 345 RRQKLARALQQY-GIAIPSPGD--GLNLWLPLD--TDSQATALTLAKSGWLVR 392
|
|
| YhcF |
COG1725 |
DNA-binding transcriptional regulator YhcF, GntR family [Transcription]; |
13-96 |
3.03e-24 |
|
DNA-binding transcriptional regulator YhcF, GntR family [Transcription];
Pssm-ID: 441331 [Multi-domain] Cd Length: 114 Bit Score: 97.17 E-value: 3.03e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 13 RIDRSSPEPMYRQLLQLMQQAILTGELGPGTKLPSSRTLAGDLSIARNTVLHVYDQLTAEGYVLTTTGSGTYVADTRPDA 92
Cdd:COG1725 2 RIDFDSGVPIYEQIADQIKEAIASGELKPGDRLPSVRELAAELGVNPNTVAKAYRELEDEGLIETRRGKGTFVAEDAREL 81
|
....
gi 736059228 93 AAIR 96
Cdd:COG1725 82 LEER 85
|
|
| PRK05764 |
PRK05764 |
aspartate aminotransferase; Provisional |
173-414 |
2.22e-22 |
|
aspartate aminotransferase; Provisional
Pssm-ID: 235596 Cd Length: 393 Bit Score: 99.04 E-value: 2.22e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 173 YAPGGGYRPLRRALADYLRVARSVKCSPDQVIITTGIHQSIDLAVRLLSDIGDR------AWVeepCYwgvRSVLQAAGL 246
Cdd:PRK05764 64 YTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEviipapYWV---SY---PEMVKLAGG 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 247 TLAPVPVDQE-GLDPRASDMQH--PPR---LVLVTPSHqyPLGMVMSLARRRMLLEYARQHRCWIIEDD------YDSEF 314
Cdd:PRK05764 138 VPVFVPTGEEnGFKLTVEQLEAaiTPKtkaLILNSPSN--PTGAVYSPEELEAIADVAVEHDIWVLSDEiyeklvYDGAE 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 315 RYgsrPLASLQ-GLDDggRVIYVGSLGK---MlfPGLRMGYMVVPEHLVDtfrtGLSELyrEGQ-------LMQQAVLAE 383
Cdd:PRK05764 216 FT---SIASLSpELRD--RTITVNGFSKayaM--TGWRLGYAAGPKELIK----AMSKL--QSHstsnptsIAQYAAVAA 282
|
250 260 270
....*....|....*....|....*....|.
gi 736059228 384 FimDGHLtSHVRRMRTLYGERRQLMIDAIRA 414
Cdd:PRK05764 283 L--NGPQ-DEVEEMRQAFEERRDLMVDGLNE 310
|
|
| PRK06108 |
PRK06108 |
pyridoxal phosphate-dependent aminotransferase; |
173-443 |
1.17e-18 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180404 Cd Length: 382 Bit Score: 87.69 E-value: 1.17e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 173 YAPGGGYRPLRRALADYLRVARSVKCSPDQVIITTGIHQSIDLAVRLLSDIGDRAWVEEPCYWGVRSVLQAAGLTLAPVP 252
Cdd:PRK06108 57 YTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVP 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 253 VDQEG----LDPRASDMQHPPR---LVLVTPSHqyPLGMVMSLARRRMLLEYARQHRCWIIEDDYDSEFRYGSRPLAS-- 323
Cdd:PRK06108 137 LDFGGggwtLDLDRLLAAITPRtraLFINSPNN--PTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPsf 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 324 LQGLDDGGRVIYVGSLGK-MLFPGLRMGYMVVPEHLVDTFrTGLSELYREG--QLMQQAVLAEFIM-DGHLTSHVRRMRt 399
Cdd:PRK06108 215 LDIAEPDDRIIFVNSFSKnWAMTGWRLGWLVAPPALGQVL-EKLIEYNTSCvaQFVQRAAVAALDEgEDFVAELVARLR- 292
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 736059228 400 lygERRQLMIDAIRARFGEALPVmgDEAGLHLVLGLPDACDDRA 443
Cdd:PRK06108 293 ---RSRDHLVDALRALPGVEVAK--PDGAMYAFFRIPGVTDSLA 331
|
|
| WHTH_GntR |
cd07377 |
Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional ... |
21-86 |
1.70e-17 |
|
Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; This CD represents the winged HTH DNA-binding domain of the GntR (named after the gluconate operon repressor in Bacillus subtilis) family of bacterial transcriptional regulators and their putative homologs found in eukaryota and archaea. The GntR family has over 6000 members distributed among almost all bacterial species, which is comprised of FadR, HutC, MocR, YtrA, AraR, PlmA, and other subfamilies for the regulation of the most varied biological process. The monomeric proteins of the GntR family are characterized by two function domains: a small highly conserved winged helix-turn-helix prokaryotic DNA binding domain in the N-terminus, and a very diverse regulatory ligand-binding domain in the C-terminus for effector-binding/oligomerization, which provides the basis for the subfamily classifications. Binding of the effector to GntR-like transcriptional regulators is presumed to result in a conformational change that regulates the DNA-binding affinity of the repressor. The GntR-like proteins bind as dimers, where each monomer recognizes a half-site of 2-fold symmetric DNA sequences.
Pssm-ID: 153418 [Multi-domain] Cd Length: 66 Bit Score: 76.72 E-value: 1.70e-17
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 736059228 21 PMYRQLLQLMQQAILTGELGPGTKLPSSRTLAGDLSIARNTVLHVYDQLTAEGYVLTTTGSGTYVA 86
Cdd:cd07377 1 PLYEQIADQLREAILSGELKPGDRLPSERELAEELGVSRTTVREALRELEAEGLVERRPGRGTFVA 66
|
|
| tyr_nico_aTase |
TIGR01265 |
tyrosine/nicotianamine family aminotransferase; This subfamily of pyridoxal ... |
173-369 |
8.67e-17 |
|
tyrosine/nicotianamine family aminotransferase; This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Pssm-ID: 188123 Cd Length: 403 Bit Score: 82.39 E-value: 8.67e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 173 YAPGGGYRPLRRALADYLRVARSVKCSPDQVIITTGIHQSIDLAVRLLSDIGDRAWVEEPCYWGVRSVLQAAGLTLAP-- 250
Cdd:TIGR01265 69 YAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLyd 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 251 ------VPVDQEGLDPRASDmqHPPRLVLVTPSHqyPLGMVMSLARRRMLLEYARQHRCWIIEDDYDSEFRYGSRPLASL 324
Cdd:TIGR01265 149 llpekdWEIDLDGLESLADE--KTVAIVVINPSN--PCGSVFSRDHLQKIAEVAEKLGIPIIADEIYGHMVFGDAPFIPM 224
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 736059228 325 QGLDDGGRVIYVGSLGKMLF-PGLRMGYMVVPEH---LVDTFRTGLSEL 369
Cdd:TIGR01265 225 ASFASIVPVLSLGGISKRWVvPGWRLGWIIIHDPhgiFRDTVLQGLKNL 273
|
|
| PRK07777 |
PRK07777 |
putative succinyldiaminopimelate transaminase DapC; |
173-449 |
2.13e-15 |
|
putative succinyldiaminopimelate transaminase DapC;
Pssm-ID: 236095 [Multi-domain] Cd Length: 387 Bit Score: 77.77 E-value: 2.13e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 173 YAPGGGYRPLRRALADYLRVARSVKCSPD-QVIITTGIHQSIDLAVRLLSDIGDRAWVEEPCYWGVRSVLQAAGLTLAPV 251
Cdd:PRK07777 57 YPPGPGIPELRAAIAAQRRRRYGLEYDPDtEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPV 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 252 PVDQEG----LDPRASDMQHPP--RLVLVTPSHQyPLGMVMSLARRRMLLEYARQHRCWIIEDDYDSEFRYGSR---PLA 322
Cdd:PRK07777 137 PLVPDGrgfaLDLDALRAAVTPrtRALIVNSPHN-PTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGArhlPLA 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 323 SLQGLDDggRVIYVGSLGKML-FPGLRMGYMVVPEHLVDTFRTGLSEL-YREGQLMQQAVlAEFImdGHLTSHVRRMRTL 400
Cdd:PRK07777 216 TLPGMRE--RTVTISSAAKTFnVTGWKIGWACGPAPLIAAVRAAKQYLtYVGGAPFQPAV-AHAL--DHEDAWVAALRDS 290
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 736059228 401 YGERRQLMIDAIRARFGEALPVMG------------DEAGLHLVLGLPDACDDRAVTQSAF 449
Cdd:PRK07777 291 LQAKRDRLAAGLAEAGFEVHDSAGtyflcadprplgYDDGTEFCRALPERVGVAAIPMSVF 351
|
|
| MngR |
COG2188 |
DNA-binding transcriptional regulator, GntR family [Transcription]; |
17-93 |
1.77e-14 |
|
DNA-binding transcriptional regulator, GntR family [Transcription];
Pssm-ID: 441791 [Multi-domain] Cd Length: 238 Bit Score: 72.97 E-value: 1.77e-14
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 736059228 17 SSPEPMYRQLLQLMQQAILTGELGPGTKLPSSRTLAGDLSIARNTVLHVYDQLTAEGYVLTTTGSGTYVADTRPDAA 93
Cdd:COG2188 1 SSPVPLYLQIADALRERIESGELPPGDRLPSERELAEEFGVSRMTVRKALDELVEEGLLERRQGRGTFVAEPKIEYP 77
|
|
| PRK07682 |
PRK07682 |
aminotransferase; |
172-412 |
9.70e-14 |
|
aminotransferase;
Pssm-ID: 181082 [Multi-domain] Cd Length: 378 Bit Score: 72.85 E-value: 9.70e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 172 TYAPGGGYRPLRRALADYLRVARSVKCSPD-QVIITTGIHQSIDLAVRLLSDIGDRAWVEEPCYwgvrsVLQAAGLTLA- 249
Cdd:PRK07682 52 SYTANAGLLELRQEIAKYLKKRFAVSYDPNdEIIVTVGASQALDVAMRAIINPGDEVLIVEPSF-----VSYAPLVTLAg 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 250 --PVPVD---QEGLDPRASDMQH--PPR---LVLVTPSHqyPLGMVMSLARRRMLLEYARQHRCWIIEDDYDSEFRYGSR 319
Cdd:PRK07682 127 gvPVPVAttlENEFKVQPAQIEAaiTAKtkaILLCSPNN--PTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEA 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 320 --PLASLQGLDDggRVIYVGSLGK-MLFPGLRMGYMVVPEHLvdtfrtgLSELYREGQ--LMQQAVLAEFIMDGHLTS-- 392
Cdd:PRK07682 205 ytSFASIKGMRE--RTILISGFSKgFAMTGWRLGFIAAPVYF-------SEAMLKIHQysMMCAPTMAQFAALEALRAgn 275
|
250 260
....*....|....*....|.
gi 736059228 393 -HVRRMRTLYGERRQLMIDAI 412
Cdd:PRK07682 276 dDVIRMRDSYRKRRNFFVTSF 296
|
|
| HisC |
COG0079 |
Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase [Amino acid ... |
163-461 |
1.06e-13 |
|
Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase [Amino acid transport and metabolism]; Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis
Pssm-ID: 439849 [Multi-domain] Cd Length: 341 Bit Score: 72.09 E-value: 1.06e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 163 WKEANPELLTYaPGGGYRPLRRALADYLRVarsvkcSPDQVIITTGihqS---IDLAVRLLSDIGDRAWVEEPCYWGVRS 239
Cdd:COG0079 35 IAAALDALNRY-PDPDATALREALAEYYGV------PPEQVLVGNG---SdelIQLLARAFLGPGDEVLVPEPTFSEYPI 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 240 VLQAAGLTLAPVPVDQE-GLDPRA--SDMQHPPRLV-LVTPSHqyPLGMVMSLARRRMLLEYARQHrCWIIEDD-YdSEF 314
Cdd:COG0079 105 AARAAGAEVVEVPLDEDfSLDLDAllAAITERTDLVfLCNPNN--PTGTLLPREELEALLEALPAD-GLVVVDEaY-AEF 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 315 RYGSRPLASLqgLDDGGRVIYVGSLGKML-FPGLRMGYMVVPEHLVDTFR--------TGLSelyregqlmqQAVLAEFI 385
Cdd:COG0079 181 VPEEDSALPL--LARYPNLVVLRTFSKAYgLAGLRLGYAIASPELIAALRrvrgpwnvNSLA----------QAAALAAL 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 386 MDghlTSHVRRMRTLygerrqlmIDAIRARFGEALpvmgDEAGLHLV--------LGLPDacDDRAVTQSAFDAGVIVRP 457
Cdd:COG0079 249 ED---RAYLEETRAR--------LRAERERLAAAL----RALGLTVYpsqanfvlVRVPE--DAAELFEALLERGILVRD 311
|
....
gi 736059228 458 LTSY 461
Cdd:COG0079 312 FSSF 315
|
|
| PRK07568 |
PRK07568 |
pyridoxal phosphate-dependent aminotransferase; |
164-341 |
1.77e-13 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 181036 Cd Length: 397 Bit Score: 72.19 E-value: 1.77e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 164 KEANPELLTYAPGGGYRPLRRALADYLRvARSVKCSPDQVIITTGIHQSIDLAVRLLSDIGDRAWVEEPCYWGVRSVLQA 243
Cdd:PRK07568 53 KNYDEEVLAYSHSQGIPELREAFAKYYK-KWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATS 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 244 AGLTLAPVPVDQEglD----PRASDMQH--PPR---LVLVTPSHqyPLGMVMSLARRRMLLEYARQHRCWIIEDDYDSEF 314
Cdd:PRK07568 132 AGVKIVPVTTKIE--EgfhlPSKEEIEKliTPKtkaILISNPGN--PTGVVYTKEELEMLAEIAKKHDLFLISDEVYREF 207
|
170 180 190
....*....|....*....|....*....|
gi 736059228 315 RYGSRPLAS---LQGLDDggRVIYVGSLGK 341
Cdd:PRK07568 208 VYDGLKYTSalsLEGLED--RVIIIDSVSK 235
|
|
| PLN00143 |
PLN00143 |
tyrosine/nicotianamine aminotransferase; Provisional |
172-353 |
9.64e-13 |
|
tyrosine/nicotianamine aminotransferase; Provisional
Pssm-ID: 165711 [Multi-domain] Cd Length: 409 Bit Score: 70.04 E-value: 9.64e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 172 TYAPGGGYRPLRRALADYLRVARSVKCSPDQVIITTGIHQSIDLAVRLLSDIGDRAWVEEPCY-----WGVRSVLQAAGL 246
Cdd:PLN00143 69 SYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFpdvetYAIFHHLEIRHF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 247 TLAPV---PVDQEGLDPRASdmQHPPRLVLVTPSHqyPLGMVMSLARRRMLLEYARQHRCWIIEDDYDSEFRYGSRPLAS 323
Cdd:PLN00143 149 DLLPEkgwEVDLDAVEAIAD--ENTIAMVIINPGN--PCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVP 224
|
170 180 190
....*....|....*....|....*....|.
gi 736059228 324 LQGLDDGGRVIYVGSLGKM-LFPGLRMGYMV 353
Cdd:PLN00143 225 MGLFASIVPVITLGSISKRwMIPGWGLGWLV 255
|
|
| PLN02656 |
PLN02656 |
tyrosine transaminase |
173-354 |
4.06e-11 |
|
tyrosine transaminase
Pssm-ID: 178262 [Multi-domain] Cd Length: 409 Bit Score: 64.95 E-value: 4.06e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 173 YAPGGGYRPLRRALADYLRVARSVKCSPDQVIITTGIHQSIDLAVRLLSDIGDRAWVEEPCY------WGVRSvLQAAGL 246
Cdd:PLN02656 69 YAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFpiyelcAAFRH-LEVRYV 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 247 TLAPV---PVDQEGLDPRASdmQHPPRLVLVTPSHqyPLGMVMSLARRRMLLEYARQHRCWIIEDDYDSEFRYGSRPLAS 323
Cdd:PLN02656 148 DLLPEkgwEVDLDAVEALAD--QNTVALVIINPGN--PCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVP 223
|
170 180 190
....*....|....*....|....*....|..
gi 736059228 324 LQGLDDGGRVIYVGSLGKM-LFPGLRMGYMVV 354
Cdd:PLN02656 224 MGVFGSIVPVLTLGSLSKRwIVPGWRLGWFVT 255
|
|
| PRK05957 |
PRK05957 |
pyridoxal phosphate-dependent aminotransferase; |
166-358 |
4.92e-11 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235654 Cd Length: 389 Bit Score: 64.32 E-value: 4.92e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 166 ANPELLTYAPGGGYRPLRRALADYLRVARSVKCSPDQ-VIITTGIHQSIDLAVRLLSDIGDRAWVEEPCYWGVRSVLQAA 244
Cdd:PRK05957 54 ANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQaIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMA 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 245 GLTLAPVPVDqEGLDPRASDMQH---PPRLVLVTPSHQYPLGMVMSLARRRMLLEYARQHRCWIIEDDYDSEFRYGSRPL 321
Cdd:PRK05957 134 GCQPILVPTD-DNYQLQPEAIEQaitPKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKH 212
|
170 180 190
....*....|....*....|....*....|....*....
gi 736059228 322 ASLQGLDD-GGRVIYVGSLGKML-FPGLRMGYMVVPEHL 358
Cdd:PRK05957 213 FSPGSIPGsGNHTISLYSLSKAYgFASWRIGYMVIPIHL 251
|
|
| PRK07550 |
PRK07550 |
aminotransferase; |
173-350 |
1.69e-10 |
|
aminotransferase;
Pssm-ID: 181026 [Multi-domain] Cd Length: 386 Bit Score: 62.67 E-value: 1.69e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 173 YAPGGGYRPLRRALADYLRVARSVKCSPDQVIITTGIHQSIDLAVRLLSDIGDRAWVEEPCYWGVRSVLQAAGLTLAPVP 252
Cdd:PRK07550 63 YGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLP 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 253 VD-QEGLDPRASDMQH--PPR---LVLVTPSHqyPLGMVMSLARRRMLLEYARQHRCWIIEDDYDSEFRYGS-RPLASLQ 325
Cdd:PRK07550 143 CDeGPGLLPDPAAAEAliTPRtraIALVTPNN--PTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGgAPHDLFA 220
|
170 180
....*....|....*....|....*.
gi 736059228 326 GLDDGGRVIYVGSLGKML-FPGLRMG 350
Cdd:PRK07550 221 DPDWDDTLVHLYSFSKSYaLTGHRVG 246
|
|
| PRK07683 |
PRK07683 |
aminotransferase A; Validated |
172-472 |
1.76e-10 |
|
aminotransferase A; Validated
Pssm-ID: 236075 Cd Length: 387 Bit Score: 62.82 E-value: 1.76e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 172 TYAPGGGYRPLRRALADYLRVARSVKCSPD-QVIITTGIHQSIDLAVRLLSDIGDRAWVEEPCYWGVRSVLQAAGLTlaP 250
Cdd:PRK07683 60 SYTHNAGLLELRKAACNFVKDKYDLHYSPEsEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAK--P 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 251 VPVDQEGLDPRASDMQHPPRLV-----LVTPSHQYPLGMVMSLARRRMLLEYARQHRCWIIEDDYDSEFRYGSR--PLAS 323
Cdd:PRK07683 138 VFIDTRSTGFRLTAEALENAITektrcVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPhtSIAH 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 324 LQGLDDggRVIYVGSLGK---MlfPGLRMGYMVVP----EHLVDTFRTGLSelyREGQLMQQAVLAEfimdghLTS---H 393
Cdd:PRK07683 218 FPEMRE--KTIVINGLSKshsM--TGWRIGFLFAPsylaKHILKVHQYNVT---CASSISQYAALEA------LTAgkdD 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 394 VRRMRTLYGERRQLMIDAIRARfgeALPVMGDEAGLHLVLGLPdacddrAVTQSAFD--------AGVIVRPLT------ 459
Cdd:PRK07683 285 AKMMRHQYKKRRDYVYNRLISM---GLDVEKPTGAFYLFPSIG------HFTMSSFDfaldlveeAGLAVVPGSafseyg 355
|
330
....*....|....*....
gi 736059228 460 ------SYYSNLDTARQGL 472
Cdd:PRK07683 356 egyvrlSYAYSIETLKEGL 374
|
|
| GntR |
pfam00392 |
Bacterial regulatory proteins, gntR family; This family of regulatory proteins consists of the ... |
23-85 |
4.71e-10 |
|
Bacterial regulatory proteins, gntR family; This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerization domain. The GntR-like proteins include the following sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA, DevA, DasR. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships. The DasR regulator has been shown to be a global regulator of primary metabolism and development in Streptomyces coelicolor.
Pssm-ID: 306822 [Multi-domain] Cd Length: 64 Bit Score: 55.31 E-value: 4.71e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 736059228 23 YRQLLQLMQQAILTGELGPGTKLPSSRTLAGDLSIARNTVLHVYDQLTAEGYVLTTTGSGTYV 85
Cdd:pfam00392 2 YEQVYARLREDILSGRLRPGDKLPSERELAAEFGVSRTTVREALRRLEAEGLVERRQGRGTFV 64
|
|
| FadR |
COG2186 |
DNA-binding transcriptional regulator, FadR family [Transcription]; |
18-94 |
5.82e-10 |
|
DNA-binding transcriptional regulator, FadR family [Transcription];
Pssm-ID: 441789 [Multi-domain] Cd Length: 232 Bit Score: 59.56 E-value: 5.82e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 736059228 18 SPEPMYRQLLQLMQQAILTGELGPGTKLPSSRTLAGDLSIARNTVLHVYDQLTAEGYVLTTTGSGTYVADTRPDAAA 94
Cdd:COG2186 4 RRRSLAEQVAEQLRELILSGELKPGDRLPSERELAEQLGVSRTTVREALRALEALGLVEVRQGGGTFVREPSPWALL 80
|
|
| PRK07337 |
PRK07337 |
pyridoxal phosphate-dependent aminotransferase; |
173-457 |
7.88e-10 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180937 Cd Length: 388 Bit Score: 60.84 E-value: 7.88e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 173 YAPGGGYRPLRRALADYLRVARSVKCSPDQVIITTGIHQSIDLAVRLLSDIGDRAWVEEPCYWGVRSVLQAAGLTLAPVP 252
Cdd:PRK07337 63 YTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVP 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 253 VDQE------GLDPRASDMQHPPRLVLVTPSHqyPLGMVMSLARRRMLLEYARQHRCWIIEDDYDSEFRYGSRPLASLQG 326
Cdd:PRK07337 143 SGPAerfqltAADVEAAWGERTRGVLLASPSN--PTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSL 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 327 LDDggrVIYVGSLGKML-FPGLRMGYMVVPEHLVDTFRTGLSELYR-EGQLMQQAVLAEFIMDGhLTSHVRRmRTLYGER 404
Cdd:PRK07337 221 GDD---VITINSFSKYFnMTGWRLGWLVVPEALVGTFEKLAQNLFIcASALAQHAALACFEPDT-LAIYERR-RAEFKRR 295
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 405 RQLMIDAIrARFGEALPVMGDeaGLHLV------LGLPDACDDRAVTQSAF-DAGVIVRP 457
Cdd:PRK07337 296 RDFIVPAL-ESLGFKVPVMPD--GAFYVyadcrgVAHPAAGDSAALTQAMLhDAGVVLVP 352
|
|
| PLN00145 |
PLN00145 |
tyrosine/nicotianamine aminotransferase; Provisional |
111-354 |
8.74e-10 |
|
tyrosine/nicotianamine aminotransferase; Provisional
Pssm-ID: 215074 [Multi-domain] Cd Length: 430 Bit Score: 60.55 E-value: 8.74e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 111 PAPDAQGSLSMRGRQLIEHAGVSRRqwGAFMPGVP----DVSEFPS-RTwsrlqARLWKEANPELLT------YAPGGGY 179
Cdd:PLN00145 24 AALAAAGALSIRAVLNRVKACVDAG--GGPRPVLPlghgDPSAFPCfRT-----APEAEDAVAAALRsgkynsYSTCVGL 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 180 RPLRRALADYLRVARSVKCSPDQVIITTGIHQSIDLAVRLLSDIGDRAWVEEPCY--WGVRSV---LQAAGLTLAPV--- 251
Cdd:PLN00145 97 LPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYplYEARAVfsgLEVRHFDLLPErgw 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 252 PVDQEGLDPRASdmQHPPRLVLVTPSHqyPLGMVMSLARRRMLLEYARQHRCWIIEDDYDSEFRYGSRPLASLQGLDDGG 331
Cdd:PLN00145 177 EVDLEGVEALAD--ENTVAMVIINPNN--PCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVA 252
|
250 260
....*....|....*....|....
gi 736059228 332 RVIYVGSLGKM-LFPGLRMGYMVV 354
Cdd:PLN00145 253 PVLTLGSISKRwVVPGWRLGWIAT 276
|
|
| HTH_GNTR |
smart00345 |
helix_turn_helix gluconate operon transcriptional repressor; |
32-85 |
1.72e-09 |
|
helix_turn_helix gluconate operon transcriptional repressor;
Pssm-ID: 197669 [Multi-domain] Cd Length: 60 Bit Score: 53.73 E-value: 1.72e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 736059228 32 QAILTGELGPGTKLPSSRTLAGDLSIARNTVLHVYDQLTAEGYVLTTTGSGTYV 85
Cdd:smart00345 7 EDIVSGELRPGDKLPSERELAAQLGVSRTTVREALSRLEAEGLVQRRPGSGTFV 60
|
|
| tyr_amTase_E |
TIGR01264 |
tyrosine aminotransferase, eukaryotic; This model describes tyrosine aminotransferase as found ... |
173-376 |
4.12e-09 |
|
tyrosine aminotransferase, eukaryotic; This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs. [Energy metabolism, Amino acids and amines]
Pssm-ID: 273529 [Multi-domain] Cd Length: 401 Bit Score: 58.64 E-value: 4.12e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 173 YAPGGGYRPLRRALADYLRVARSVkCSPDQVIITTGIHQSIDLAVRLLSDIGDRAWVEEPCYWGVRSVLQAAGLTLAPVP 252
Cdd:TIGR01264 69 YAPTVGALSAREAIASYYHNPDGP-IEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYN 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 253 VDQE-----GLDPRASDMQHPPRLVLVT-PSHqyPLGMVMSLARRRMLLEYARQHRCWIIEDDYDSEFRYGSRPLASLQG 326
Cdd:TIGR01264 148 LLPDksweiDLKQLESLIDEKTAALIVNnPSN--PCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLAS 225
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 736059228 327 LDDGGRVIYVGSLGK-MLFPGLRMGYMVVPEHLvDTFRTGLSELYREGQLM 376
Cdd:TIGR01264 226 LSSTVPILSCGGLAKrWLVPGWRLGWIIIHDRR-GILRDIRDGLVKLSQRI 275
|
|
| PRK07681 |
PRK07681 |
LL-diaminopimelate aminotransferase; |
167-457 |
5.84e-09 |
|
LL-diaminopimelate aminotransferase;
Pssm-ID: 181081 Cd Length: 399 Bit Score: 57.89 E-value: 5.84e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 167 NPELLTYAPGGgYRPLRRALADYLRVARSVKCSPD-QVIITTGihqSIDLAVRL---LSDIGDRAWVEEPCYWGVRSVLQ 242
Cdd:PRK07681 60 QKESYGYTLSG-IQEFHEAVTEYYNNTHNVILNADkEVLLLMG---SQDGLVHLpmvYANPGDIILVPDPGYTAYETGIQ 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 243 AAGLTLAPVPVDQEG-----LDPRASDMQHPPRLVLVTpshqYPLGMVMSLARR---RMLLEYARQHRCWIIEDDYDSEF 314
Cdd:PRK07681 136 MAGATSYYMPLKKENdflpdLELIPEEIADKAKMMILN----FPGNPVPAMAHEdffKEVIAFAKKHNIIVVHDFAYAEF 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 315 RY-GSRPLA--SLQGLDDGGrvIYVGSLGKML-FPGLRMGYMVVPEHLVDTFRTGLSELYREGQLMQQAVLAEFIMDGhl 390
Cdd:PRK07681 212 YFdGNKPISflSVPGAKEVG--VEINSLSKSYsLAGSRIGYMIGNEEIVRALTQFKSNTDYGVFLPIQKAACAALRNG-- 287
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 736059228 391 TSHVRRMRTLYGERRQLMIDAIRaRFGeaLPVMGDEAGLHLVLGLPDACDDRAVTQSAFD-AGVIVRP 457
Cdd:PRK07681 288 AAFCEKNRGIYQERRDTLVDGFR-TFG--WNVDKPAGSMFVWAEIPKGWTSLSFAYALMDrANVVVTP 352
|
|
| PRK09764 |
PRK09764 |
GntR family transcriptional regulator; |
21-89 |
5.95e-09 |
|
GntR family transcriptional regulator;
Pssm-ID: 182065 [Multi-domain] Cd Length: 240 Bit Score: 56.76 E-value: 5.95e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 736059228 21 PMYRQLLQLMQQAILTGELGPGTKLPSSRTLAGDLSIARNTVLHVYDQLTAEGYVLTTTGSGTYVADTR 89
Cdd:PRK09764 5 PLYRQIADRIREQIARGELKPGDALPTESALQTEFGVSRVTVRQALRQLVEQQILESIQGSGTYVKEER 73
|
|
| PLN02187 |
PLN02187 |
rooty/superroot1 |
172-361 |
1.45e-08 |
|
rooty/superroot1
Pssm-ID: 215119 [Multi-domain] Cd Length: 462 Bit Score: 57.04 E-value: 1.45e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 172 TYAPGGGYRPLRRALADYLRVARSVKCSPDQVIITTGIHQSIDLAVRLLSDIGDRAWVEEPCY--WGVRSV---LQAAGL 246
Cdd:PLN02187 103 SYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFphYDARAAysgLEVRKF 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 247 TLAPVP---VDQEGLDPRASdmQHPPRLVLVTPSHqyPLGMVMSLARRRMLLEYARQHRCWIIEDDYDSEFRYGSRPLAS 323
Cdd:PLN02187 183 DLLPEKeweIDLEGIEAIAD--ENTVAMVVINPNN--PCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVS 258
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 736059228 324 LQGLDDGGRVIYVGSLGK-MLFPGLRMGYMVV--PEHLVDT 361
Cdd:PLN02187 259 MGKFASIVPVLTLAGISKgWVVPGWKIGWIALndPEGVFET 299
|
|
| PRK08363 |
PRK08363 |
alanine aminotransferase; Validated |
173-418 |
3.53e-08 |
|
alanine aminotransferase; Validated
Pssm-ID: 181402 Cd Length: 398 Bit Score: 55.58 E-value: 3.53e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 173 YAPGGGYRPLRRALADYLRVARSVKCSPDQVIITTGIHQSIDLAVRLLSDIGDRAWVEEPCYWGVRSVLQ-AAGLTLAPV 251
Cdd:PRK08363 66 YGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKfYGGVPVEYR 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 252 PVDQEGLDPRASDMQ-----HPPRLVLVTPSHqyPLGMVMSLARRRMLLEYARQHRCWIIEDD-YDSEFRYGS-RPLASL 324
Cdd:PRK08363 146 TIEEEGWQPDIDDIRkkiteKTKAIAVINPNN--PTGALYEKKTLKEILDIAGEHDLPVISDEiYDLMTYEGKhVSPGSL 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 325 QGLDDggrVIYVGSLGKMLF-PGLRMGYM--VVPEHLVDTFRTGLSELYR----EGQLMQQAVLAEFI--MDgHLTSHVR 395
Cdd:PRK08363 224 TKDVP---VIVMNGLSKVYFaTGWRLGYIyfVDPEGKLAEVREAIDKLARirlcPNTPAQFAAIAGLTgpMD-YLEEYMK 299
|
250 260
....*....|....*....|...
gi 736059228 396 RMRtlygERRqlmiDAIRARFGE 418
Cdd:PRK08363 300 KLK----ERR----DYIYKRLNE 314
|
|
| PRK09148 |
PRK09148 |
LL-diaminopimelate aminotransferase; |
167-419 |
3.60e-08 |
|
LL-diaminopimelate aminotransferase;
Pssm-ID: 181674 [Multi-domain] Cd Length: 405 Bit Score: 55.46 E-value: 3.60e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 167 NPELLTYAPGGGYRPLRRALADYLRVARSVKCSPD-QVIITTGIHQSIDLAVRLLSDIGDRAWVEEPCY----WGvrsvL 241
Cdd:PRK09148 58 DPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDtQVVATLGSKEGFANMAQAITAPGDVILCPNPSYpihaFG----F 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 242 QAAGLTLAPVPV--DQEGLDPRASDMQH----PPRLVLVTPSHqyPLGMVMSLARRRMLLEYARQHRCWIIEDDYDSEFR 315
Cdd:PRK09148 134 IMAGGVIRSVPAepDEEFFPALERAVRHsipkPIALIVNYPSN--PTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIY 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 316 YGSRPLASLQGLDDGGRV-IYVGSLGKML-FPGLRMGYMVVPEHLVDTFRTGLSEL-YREGQLMQQAVLAEFIMDGhltS 392
Cdd:PRK09148 212 FDGNPPPSVLQVPGAKDVtVEFTSMSKTFsMAGWRMGFAVGNERLIAALTRVKSYLdYGAFTPIQVAATAALNGPQ---D 288
|
250 260
....*....|....*....|....*..
gi 736059228 393 HVRRMRTLYGERRQLMIDAirarFGEA 419
Cdd:PRK09148 289 CIAEMRELYKKRRDVLVES----FGRA 311
|
|
| PLN00175 |
PLN00175 |
aminotransferase family protein; Provisional |
173-497 |
3.53e-07 |
|
aminotransferase family protein; Provisional
Pssm-ID: 215089 [Multi-domain] Cd Length: 413 Bit Score: 52.56 E-value: 3.53e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 173 YAPGGGYRPLRRALADYLRVARSVKCSPD-QVIITTGIHQSIDLAVRLLSDIGDRAWVEEPCYWGVRSVLQAAG-----L 246
Cdd:PLN00175 87 YARGFGVPELNSAIAERFKKDTGLVVDPEkEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGakiktV 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 247 TLAP----VPVDQegldpRASDMQHPPRLVLVTPSHQyPLGMVMSLARRRMLLEYARQHRCWIIEDD-YDS-EFRYGSRP 320
Cdd:PLN00175 167 TLRPpdfaVPEDE-----LKAAFTSKTRAILINTPHN-PTGKMFTREELELIASLCKENDVLAFTDEvYDKlAFEGDHIS 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 321 LASLQGLDDggRVIYVGSLGKML-FPGLRMGYMVVPEHLVDTFRTGLSEL-YREGQLMQQAVLAEFIMDghlTSHVRRMR 398
Cdd:PLN00175 241 MASLPGMYE--RTVTMNSLGKTFsLTGWKIGWAIAPPHLTWGVRQAHSFLtFATATPMQWAAVAALRAP---ESYYEELK 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 399 TLYGERRQLMIDAIRARFGEALP------VMGDeaglHLVLGLPdacDDRAVTQSAF-DAGVIVRPLTSYYSNLDTARQg 471
Cdd:PLN00175 316 RDYSAKKDILVEGLKEVGFKVYPssgtyfVMVD----HTPFGFE---NDIAFCEYLIeEVGVAAIPPSVFYLNPEDGKN- 387
|
330 340
....*....|....*....|....*..
gi 736059228 472 lLLGYA-CVAHEGIRPAFDTLADTIEQ 497
Cdd:PLN00175 388 -LVRFAfCKDEETLRAAVERMKTKLKR 413
|
|
| PRK06348 |
PRK06348 |
pyridoxal phosphate-dependent aminotransferase; |
173-363 |
3.57e-07 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180537 Cd Length: 384 Bit Score: 52.42 E-value: 3.57e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 173 YAPGGGYRPLRRALADYLRVARSVKCSPDQVIITTGIHQSIDLAVRLLSDIGDRAWVEEPCYWGVRSVLQAAGLTLAPVP 252
Cdd:PRK06348 62 YTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 253 -VDQEG--LDPRASDMQHPPR---LVLVTPSHqyPLGMVMSLARRRMLLEYARQHRCWIIEDD-YDS-EFRYGSRPLASL 324
Cdd:PRK06348 142 tYEEDGfqINVKKLEALITSKtkaIILNSPNN--PTGAVFSKETLEEIAKIAIEYDLFIISDEvYDGfSFYEDFVPMATL 219
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 736059228 325 QGLDDggRVIYVGSLGK-MLFPGLRMGYMVVPEHLVDTFR 363
Cdd:PRK06348 220 AGMPE--RTITFGSFSKdFAMTGWRIGYVIAPDYIIETAK 257
|
|
| PRK14999 |
PRK14999 |
histidine utilization repressor; Provisional |
16-116 |
1.13e-06 |
|
histidine utilization repressor; Provisional
Pssm-ID: 184961 [Multi-domain] Cd Length: 241 Bit Score: 49.93 E-value: 1.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 16 RSSPEPMYRQLLQLMQQAILTGELGPGTKLPSSRTLAGDLSIARNTVLHVYDQLTAEGYVLTTTGSGTYVADTRPDAAAI 95
Cdd:PRK14999 7 RSAPAPFYETVKQDICKKIAGGVWQPHDRIPSEAELVAQYGFSRMTINRALRELTDEGWLVRLQGVGTFVAEPKGQSALF 86
|
90 100
....*....|....*....|.
gi 736059228 96 RVpgatppPSAADELPAPDAQ 116
Cdd:PRK14999 87 EV------RSIAEEIAARRHQ 101
|
|
| PRK08361 |
PRK08361 |
aspartate aminotransferase; Provisional |
173-413 |
1.71e-06 |
|
aspartate aminotransferase; Provisional
Pssm-ID: 236248 [Multi-domain] Cd Length: 391 Bit Score: 50.26 E-value: 1.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 173 YAPGGGYRPLRRALADYLRVARSVKCSPDQVIITTGIHQSIDLAVRLLSDIGDRAWVEEPCYWGVRSVLQAAGLTLAPVP 252
Cdd:PRK08361 66 YTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIP 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 253 VDQEG---LDP--------RASDMqhpprLVLVTPSHqyPLGMVMSLARRRMLLEYARQHRCWIIEDDYDSEFRY-GSRP 320
Cdd:PRK08361 146 LREENefqPDPdellelitKRTRM-----IVINYPNN--PTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYeGAKH 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 321 LASLQGLDDggRVIYVGSLGKML-FPGLRMGYMVVPEHLV-DTFRTGLSELYREGQLMQQAVLaEFIMDGHLTSHVRRMR 398
Cdd:PRK08361 219 YPMIKYAPD--NTILANSFSKTFaMTGWRLGFVIAPEQVIkDMIKLHAYIIGNVASFVQIAGI-EALRSKESWKAVEEMR 295
|
250
....*....|....*
gi 736059228 399 TLYGERRQLMIDAIR 413
Cdd:PRK08361 296 KEYNERRKLVLKRLK 310
|
|
| C_P_lyase_phnF |
TIGR02325 |
phosphonates metabolism transcriptional regulator PhnF; All members of the seed alignment for ... |
14-91 |
2.21e-06 |
|
phosphonates metabolism transcriptional regulator PhnF; All members of the seed alignment for this family are predicted helix-turn-helix transcriptional regulatory proteins of the broader gntR and are found associated with genes for the import and degradation of phosphonates and/or related compounds (e.g. phosphonites) with a direct C-P bond. [Transport and binding proteins, Anions, Regulatory functions, DNA interactions]
Pssm-ID: 131378 [Multi-domain] Cd Length: 238 Bit Score: 49.01 E-value: 2.21e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 736059228 14 IDRSSPEPMYRQLLQLMQQAILTGELGPGTKLPSSRTLAGDLSIARNTVLHVYDQLTAEGYVLTTTGSGTYVADTRPD 91
Cdd:TIGR02325 1 IERTSGVALWRQIADKIEQEIAAGHLRAGDYLPAEMQLAERFGVNRHTVRRAIAALVERGLLRAEQGRGTFVAARRID 78
|
|
| PRK11402 |
PRK11402 |
transcriptional regulator PhoB; |
14-101 |
4.43e-06 |
|
transcriptional regulator PhoB;
Pssm-ID: 183118 [Multi-domain] Cd Length: 241 Bit Score: 47.91 E-value: 4.43e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 14 IDRSSPEPMYRQLLQLMQQAILTGELGPGTKLPSSRTLAGDLSIARNTVLHVYDQLTAEGYVLTTTGSGTYVADTRPDAA 93
Cdd:PRK11402 2 TDRYSHQLLYATVRQRLLDDIAQGVYQAGQQIPTENELCTQYNVSRITIRKAISDLVADGVLIRWQGKGTFVQSQKVENA 81
|
....*...
gi 736059228 94 AIRVPGAT 101
Cdd:PRK11402 82 LLTVSGFT 89
|
|
| PRK09082 |
PRK09082 |
methionine aminotransferase; Validated |
173-424 |
4.61e-06 |
|
methionine aminotransferase; Validated
Pssm-ID: 181642 [Multi-domain] Cd Length: 386 Bit Score: 48.76 E-value: 4.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 173 YAPGGGYRPLRRALADylRVARSVKCSPD---QVIITTGIHQSIDLAVRLLSDIGDRAWVEEPCYWGVRSVLQAAGLTLA 249
Cdd:PRK09082 63 YPPMTGVAALREAIAA--KTARLYGRQYDadsEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAV 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 250 PVPVD-----------QEGLDPRAsdmqhppRLVLVTPSHQyPLGMVMSLARRRMLLEYARQHRCWIIEDDYDSEFRYGS 318
Cdd:PRK09082 141 RVALQppdfrvdwqrfAAAISPRT-------RLIILNTPHN-PSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDG 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 319 RPLASL---QGLDDggRVIYVGSLGKML-FPGLRMGYMVVPEHLVDTFR--------TGLSELyregqlmqQAVLAEFiM 386
Cdd:PRK09082 213 AGHASVlrhPELRE--RAFVVSSFGKTYhVTGWKVGYCVAPAALSAEFRkvhqyntfTVNTPA--------QLALADY-L 281
|
250 260 270
....*....|....*....|....*....|....*....
gi 736059228 387 DGHlTSHVRRMRTLYGERRQLMIDAIRA-RFgEALPVMG 424
Cdd:PRK09082 282 RAE-PEHYLELPAFYQAKRDRFRAALANsRF-KLLPCEG 318
|
|
| PLN02607 |
PLN02607 |
1-aminocyclopropane-1-carboxylate synthase |
178-350 |
8.12e-06 |
|
1-aminocyclopropane-1-carboxylate synthase
Pssm-ID: 215327 [Multi-domain] Cd Length: 447 Bit Score: 48.35 E-value: 8.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 178 GYRPLRRALADYLRVARS--VKCSPDQVIITTGIHQSIDLAVRLLSDIGDRAWVEEPCYWGV-RSVLQAAGLTLAPVPVD 254
Cdd:PLN02607 96 GLKSFRQAMASFMEQIRGgkARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFdRDLRWRTGVKIVPIHCD 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 255 Q-----------EGLDPRASDMQHPPRLVLVT-PSHqyPLGMVMslaRRRML---LEYARQHRCWIIEDD-------YDS 312
Cdd:PLN02607 176 SsnnfqvtpqalEAAYQEAEAANIRVRGVLITnPSN--PLGATV---QRSVLediLDFVVRKNIHLVSDEiysgsvfSAS 250
|
170 180 190
....*....|....*....|....*....|....*....
gi 736059228 313 EFRYGSRPLASLQGLDDGGRVIYVGSLGKML-FPGLRMG 350
Cdd:PLN02607 251 EFVSVAEIVEARGYKGVAERVHIVYSLSKDLgLPGFRVG 289
|
|
| PRK06225 |
PRK06225 |
pyridoxal phosphate-dependent aminotransferase; |
173-465 |
1.92e-05 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235749 [Multi-domain] Cd Length: 380 Bit Score: 47.05 E-value: 1.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 173 YAPGGGYRPLRRALADYLRVarsvkcSPDQVIITTGIHQSIDLAVRLLSDIGDRAWVEEPCYWGVRSVLQAAGLTLAPVP 252
Cdd:PRK06225 62 YPPPEGFPELRELILKDLGL------DDDEALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVP 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 253 VDQEG----LDPRA--SDMQHPPRLV-LVTPSHqyPLGMVMSLARRRMLLEYARQHRCWIIEDDYDSEFRYGSRPLASLQ 325
Cdd:PRK06225 136 IYSEEcnykLTPELvkENMDENTRLIyLIDPLN--PLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYA 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 326 glDDGGRVIYvgSLGKML-FPGLRMGYMVVPEHLVDTFRT------GLSELYREGQLMQQAVLAEFIMDghltshVRRMR 398
Cdd:PRK06225 214 --PEHTVTSY--SFSKIFgMAGLRIGAVVATPDLIEVVKSivindlGTNVIAQEAAIAGLKVKDEWIDR------IRRTT 283
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 736059228 399 TlygeRRQLMI-DAIRARFGEALPVMGDEAGLhLVLGLPDA-CDDRAVTQSAFDAGVIVRPlTSYYSNL 465
Cdd:PRK06225 284 F----KNQKLIkEAVDEIEGVFLPVYPSHGNM-MVIDISEAgIDPEDLVEYLLERKIFVRQ-GTYTSKR 346
|
|
| PTZ00433 |
PTZ00433 |
tyrosine aminotransferase; Provisional |
173-361 |
2.59e-05 |
|
tyrosine aminotransferase; Provisional
Pssm-ID: 185613 Cd Length: 412 Bit Score: 46.70 E-value: 2.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 173 YAPGGGYRPLRRALADYLRV------ARSVKCSPDQVIITTGIHQSIDLAVRLLSDIGDRAWVEEPCYWGVRSVLQAAGl 246
Cdd:PTZ00433 71 YPPTVGSPEAREAVATYWRNsfvhkeSLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYG- 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 247 tlapVPVDQEGLDPRAS---DMQHPPRLV--------LVTPSHqyPLGMVMSLARRRMLLEYARQHRCWIIEDDYDSEFR 315
Cdd:PTZ00433 150 ----IEMRFYNCRPEKDweaDLDEIRRLVddrtkaliMTNPSN--PCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMV 223
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 736059228 316 YGSRPLASLQGLDDG-GRVIYVGSLGKMLFPGLRMGYMVvpehLVDT 361
Cdd:PTZ00433 224 FNGATFTSVADFDTTvPRVILGGTAKNLVVPGWRLGWLL----LVDP 266
|
|
| PRK07309 |
PRK07309 |
pyridoxal phosphate-dependent aminotransferase; |
173-360 |
3.89e-05 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235985 Cd Length: 391 Bit Score: 45.87 E-value: 3.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 173 YAPGGGYRPLRRALADYLRVARSVKCSP-DQVIITTGIHQSIDLAVRLLSDIGDRAWVEEPCYWGVRSVLQAAGLTlaPV 251
Cdd:PRK07309 63 YTGMAGLLELRQAAADFVKEKYNLDYAPeNEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAE--IV 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 252 PVDQEG----LDP---RASDMQHPPRL---VLVTPSHqyPLGMVMSLARRRMLLEYARQHRCWIIEDDYDSEFRYGSRPL 321
Cdd:PRK07309 141 EIDTTEndfvLTPemlEKAILEQGDKLkavILNYPAN--PTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPH 218
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 736059228 322 ASL-QGLDDggRVIYVGSLGK---MlfPGLRMGYMVVPEHLVD 360
Cdd:PRK07309 219 VSIaEYLPD--QTILINGLSKshaM--TGWRIGLIFAPAEFTA 257
|
|
| PRK10421 |
PRK10421 |
DNA-binding transcriptional repressor LldR; Provisional |
25-85 |
7.50e-05 |
|
DNA-binding transcriptional repressor LldR; Provisional
Pssm-ID: 236690 [Multi-domain] Cd Length: 253 Bit Score: 44.37 E-value: 7.50e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 736059228 25 QLLQLMQQAILTGELGPGTKLPSSRTLAGDLSIARNTVLHVYDQLTAEGYVLTTTGSGTYV 85
Cdd:PRK10421 6 EVADRVRALIEEKNLEAGMKLPAERQLAMQLGVSRNSLREALAKLVSEGVLLSRRGGGTFI 66
|
|
| PRK08960 |
PRK08960 |
pyridoxal phosphate-dependent aminotransferase; |
173-414 |
1.70e-04 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 181595 Cd Length: 387 Bit Score: 43.89 E-value: 1.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 173 YAPGGGYRPLRRALADYLRVARSVKCSPDQVIITTGIHQSIDLAVRLLSDIGDRAWVEEPCYWGVRSVLQAAGLTLAPVP 252
Cdd:PRK08960 65 YTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVP 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 253 VDQEgldpraSDMQHPPRLV-----------LV-TPSHqyPLGMVMSLARRRMLLEYARQHRCWIIEDDYDSEFRYGsRP 320
Cdd:PRK08960 145 VGPD------SRYQLTPALVerhwnadtvgaLVaSPAN--PTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYG-VD 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 321 LASLQGLDDGGRVIyvGSLGKML-FPGLRMGYMVVPEHLVDTFRTGLSELYREGQLM-QQAVLAEFIMDGHLTSHVRRMR 398
Cdd:PRK08960 216 AASVLEVDDDAFVL--NSFSKYFgMTGWRLGWLVAPPAAVPELEKLAQNLYISASTPaQHAALACFEPETLAILEARRAE 293
|
250
....*....|....*.
gi 736059228 399 tlYGERRQLMIDAIRA 414
Cdd:PRK08960 294 --FARRRDFLLPALRE 307
|
|
| PRK11523 |
PRK11523 |
transcriptional regulator ExuR; |
19-128 |
1.72e-04 |
|
transcriptional regulator ExuR;
Pssm-ID: 183176 [Multi-domain] Cd Length: 253 Bit Score: 43.30 E-value: 1.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 19 PEPMYRQLLQLMQQAILTGELGPGTKLPSSRTLAGDLSIARNTVLHVYDQLTAEGYVLTTTGSGTYVADTRPDAAAIrvp 98
Cdd:PRK11523 6 PRRLYQQLAAELKERIEQGVYLVGDKLPAERFIADEKNVSRTVVREAIIMLEVEGYVEVRKGSGIHVVSNQPRHQQA--- 82
|
90 100 110
....*....|....*....|....*....|.
gi 736059228 99 gatppPSAADELpapDAQGSLS-MRGRQLIE 128
Cdd:PRK11523 83 -----ADNNMEF---ANYGPFElLQARQLIE 105
|
|
| PRK12414 |
PRK12414 |
putative aminotransferase; Provisional |
173-464 |
2.33e-04 |
|
putative aminotransferase; Provisional
Pssm-ID: 183514 Cd Length: 384 Bit Score: 43.62 E-value: 2.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 173 YAPGGGYRPLRRALADYLRVARSVKCSPD-QVIITTGIHQSIDLAVRLLSDIGDRAWVEEPCYWGVRSVLQAAGLTLAPV 251
Cdd:PRK12414 62 YAPMAGIAALREALAEKTERLYGARYDPAsEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAI 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 252 PVDQEGL----DPRASDMQHPPRLVLVTPSHQyPLGMVMSLARRRMLLEYARQHRCWIIEDD------YDSEFRYG---S 318
Cdd:PRK12414 142 KLSPEDFrvnwDEVAAAITPRTRMIIVNTPHN-PSATVFSAADLARLAQLTRNTDIVILSDEvyehvvFDGARHHSmarH 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 319 RPLASlqglddggRVIYVGSLGKML-FPGLRMGYMVVPEHLVDtfrtglsELYREGQLMQQAvlAEFIMDGHLTSHVRRM 397
Cdd:PRK12414 221 RELAE--------RSVIVSSFGKSYhVTGWRVGYCLAPAELMD-------EIRKVHQFMVFS--ADTPMQHAFAEALAEP 283
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 736059228 398 RT------LYGERRQLMIDAIRARFGEALPVMGDEAGLHLVLGLPDACDDRAVTQSAFDAGVIVRPLTSYYSN 464
Cdd:PRK12414 284 ASylglgaFYQRKRDLLARELAGSRFELLPSEGSFFMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYTD 356
|
|
| pdhR |
PRK09464 |
pyruvate dehydrogenase complex transcriptional repressor PdhR; |
26-87 |
2.67e-04 |
|
pyruvate dehydrogenase complex transcriptional repressor PdhR;
Pssm-ID: 181879 [Multi-domain] Cd Length: 254 Bit Score: 42.70 E-value: 2.67e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 736059228 26 LLQLMQQAILTGELGPGTKLPSSRTLAGDLSIARNTVLHVYDQLTAEGYVLTTTGSGTYVAD 87
Cdd:PRK09464 15 IEQQLEFLILEGTLRPGEKLPPERELAKQFDVSRPSLREAIQRLEAKGLLLRRQGGGTFVQS 76
|
|
| PRK06425 |
PRK06425 |
histidinol-phosphate aminotransferase; Validated |
203-461 |
8.67e-04 |
|
histidinol-phosphate aminotransferase; Validated
Pssm-ID: 102370 Cd Length: 332 Bit Score: 41.38 E-value: 8.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 203 VIITTGIHQSIdlaVRLLSDIG-DRAWVEEPCYWGVRSVLQAAGLTLAPVPVDQEGLDPRASDMQHPPRLVLVTPSHqyP 281
Cdd:PRK06425 60 VLIGPGLTHFI---YRLLSYINvGNIIIVEPNFNEYKGYAFTHGIRISALPFNLINNNPEILNNYNFDLIFIVSPDN--P 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 282 LGMVMSLARRRMLLEYARQHRCWIIEDDYDSEF---RYGSRPLASlqglDDGGRVIYVGSLGKML-FPGLRMGYMVVPEH 357
Cdd:PRK06425 135 LGNLISRDSLLTISEICRKKGALLFIDEAFIDFvpnRAEEDVLLN----RSYGNVIIGRSLTKILgIPSLRIGYIATDDY 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 358 LVDTFRTglselyREGQLMQQAVLAEFIMDGHLTSHVRRMRTLYGERRQLMIDAIRARfgeALPVMGDEAGLHLVLGLPD 437
Cdd:PRK06425 211 NMKISRK------ITEPWSVCDPAIDFIRSIDLDYVAKHSLDIMENERSYLINNLEAM---GFRAAGDPSANFITFMIPD 281
|
250 260
....*....|....*....|....
gi 736059228 438 ACDdraVTQSAFDAGVIVRPLTSY 461
Cdd:PRK06425 282 AHD---FYSYLLKNGILVRLLDDY 302
|
|
| GntR |
COG1802 |
DNA-binding transcriptional regulator, GntR family [Transcription]; |
12-96 |
9.69e-04 |
|
DNA-binding transcriptional regulator, GntR family [Transcription];
Pssm-ID: 441407 [Multi-domain] Cd Length: 222 Bit Score: 40.68 E-value: 9.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 736059228 12 ARIDRSSPEPMYRQLLQLMQQAILTGELGPGTKLpSSRTLAGDLSIARNTVLHVYDQLTAEGYVLTTTGSGTYVAdtRPD 91
Cdd:COG1802 2 TSPSPLRRESLAEQVYEALREAILSGELPPGERL-SEAELAERLGVSRTPVREALRRLEAEGLVEIRPNRGARVA--PLS 78
|
....*
gi 736059228 92 AAAIR 96
Cdd:COG1802 79 PEEIR 83
|
|
| |
