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Conserved domains on  [gi|737522547|ref|WP_035496815|]
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pyridoxal kinase PdxY [Glaesserella parasuis]

Protein Classification

pyridoxal kinase PdxY( domain architecture ID 10792681)

pyridoxal kinase PdxY catalyzes the phosphorylation of pyridoxal to PLP in vivo, but shows very low activity compared to PdxK

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK05756 PRK05756
pyridoxal kinase PdxY;
1-286 0e+00

pyridoxal kinase PdxY;


:

Pssm-ID: 235592 [Multi-domain]  Cd Length: 286  Bit Score: 511.72  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547   1 MKNLISIQSHVVYGYAGNKSATFPMQLLGVDVWALNTVQFSNHTQYAKWTGMVLPKEQIGEIVRGIDEIGELHRCDAIIS 80
Cdd:PRK05756   1 MKNILSIQSHVVYGHVGNSAAVFPMQRLGVNVWPLNTVQFSNHTGYGKWTGCVMPPSHLTEIVQGIADIGWLGECDAVLS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547  81 GYIGSADQVEEIVNAVNYVKQRNPNAVYLCDPVMGHPDKGCIVADGVKEGLVKIAMKAADIITPNLVELRELSGLTVDNF 160
Cdd:PRK05756  81 GYLGSAEQGEAILDAVRRVKAANPQALYFCDPVMGDPEKGCIVAPGVAEFLRDRALPAADIITPNLFELEWLSGRPVETL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547 161 SQAIEAVKVILAQGPKKVLVKHLSKVGQDSTKFEMLLANQEGIWHISRPLHTFAKDPVGVGDLTAGLFMANLLNGKSDIE 240
Cdd:PRK05756 161 EDAVAAARALIARGPKIVLVTSLARAGYPADRFEMLLVTADGAWHISRPLVDFMRQPVGVGDLTSALFLARLLQGGSLEE 240
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 737522547 241 AFEHTANAVNEVMQITHDSGLYELQIIAAREFIVNPRSHYQAVKIA 286
Cdd:PRK05756 241 ALEHTTAAVYEVMARTKERGSYELQLVAAQDSIATPRAMFQARRLA 286
 
Name Accession Description Interval E-value
PRK05756 PRK05756
pyridoxal kinase PdxY;
1-286 0e+00

pyridoxal kinase PdxY;


Pssm-ID: 235592 [Multi-domain]  Cd Length: 286  Bit Score: 511.72  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547   1 MKNLISIQSHVVYGYAGNKSATFPMQLLGVDVWALNTVQFSNHTQYAKWTGMVLPKEQIGEIVRGIDEIGELHRCDAIIS 80
Cdd:PRK05756   1 MKNILSIQSHVVYGHVGNSAAVFPMQRLGVNVWPLNTVQFSNHTGYGKWTGCVMPPSHLTEIVQGIADIGWLGECDAVLS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547  81 GYIGSADQVEEIVNAVNYVKQRNPNAVYLCDPVMGHPDKGCIVADGVKEGLVKIAMKAADIITPNLVELRELSGLTVDNF 160
Cdd:PRK05756  81 GYLGSAEQGEAILDAVRRVKAANPQALYFCDPVMGDPEKGCIVAPGVAEFLRDRALPAADIITPNLFELEWLSGRPVETL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547 161 SQAIEAVKVILAQGPKKVLVKHLSKVGQDSTKFEMLLANQEGIWHISRPLHTFAKDPVGVGDLTAGLFMANLLNGKSDIE 240
Cdd:PRK05756 161 EDAVAAARALIARGPKIVLVTSLARAGYPADRFEMLLVTADGAWHISRPLVDFMRQPVGVGDLTSALFLARLLQGGSLEE 240
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 737522547 241 AFEHTANAVNEVMQITHDSGLYELQIIAAREFIVNPRSHYQAVKIA 286
Cdd:PRK05756 241 ALEHTTAAVYEVMARTKERGSYELQLVAAQDSIATPRAMFQARRLA 286
pyridox_kin TIGR00687
pyridoxal kinase; E. coli has an enzyme PdxK that acts in vitro as a pyridoxine/pyridoxal ...
1-286 2.78e-145

pyridoxal kinase; E. coli has an enzyme PdxK that acts in vitro as a pyridoxine/pyridoxal/pyridoxamine kinase, but mutants lacking PdxK activity retain a specific pyridoxal kinase, PdxY. PdxY acts in the salvage pathway of pyridoxal 5'-phosphate biosynthesis. Mammalian forms of pyridoxal kinase are more similar to PdxY than to PdxK. The PdxK isozyme is omitted from the seed alignment but scores above the trusted cutoff.ThiD and related proteins form an outgroup. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridoxine]


Pssm-ID: 273221 [Multi-domain]  Cd Length: 287  Bit Score: 409.22  E-value: 2.78e-145
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547    1 MKNLISIQSHVVYGYAGNKSATFPMQLLGVDVWALNTVQFSNHTQYAKWTGMVLPKEQIGEIVRGIDEIGELHRCDAIIS 80
Cdd:TIGR00687   1 MKNVLSIQSHVVYGHVGNRAATFPLQRLGFEVWAVNTVQFSNHTGYGKWTGQVLPPDELHELVEGLEAINKLNQCDAVLS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547   81 GYIGSADQVEEIVNAVNYVKQRNPNAVYLCDPVMGHPDKGCIVADGVKEGLVKIAMKAADIITPNLVELRELSGLTVDNF 160
Cdd:TIGR00687  81 GYLGSAEQVAMVVGIVRQVKQANPQALYVCDPVMGDPWKGCYVAPDLLEVYREKAIPVADIITPNQFELELLTGRRINTE 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547  161 SQAIEAVKVILAQGPKKVLVKHLSKVG-QDSTKFEMLLANQEGIWHISRPLHTFAKDPVGVGDLTAGLFMANLLNGKSDI 239
Cdd:TIGR00687 161 EEALAAADALIAMGPDIVLVTHLIRAGsQRDRSFEGLVATQEGRWHISRPLAVFDPPPVGTGDLIAALLLATLLHGNSLK 240
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 737522547  240 EAFEHTANAVNEVMQITHDSGLYELQIIAAREFIVNPRSHYQAVKIA 286
Cdd:TIGR00687 241 EALEKTVSAVYHVLRTTIQLGKYELQPVAAQLEIRMPQSKFDAEKVE 287
PdxK COG2240
Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme transport and metabolism]; Pyridoxal ...
1-274 3.35e-130

Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme transport and metabolism]; Pyridoxal/pyridoxine/pyridoxamine kinase is part of the Pathway/BioSystem: Pyridoxal phosphate biosynthesis


Pssm-ID: 441841 [Multi-domain]  Cd Length: 272  Bit Score: 370.25  E-value: 3.35e-130
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547   1 MKNLISIQSHVVYGYAGNKSATFPMQLLGVDVWALNTVQFSNHTQYAKWTGMVLPKEQIGEIVRGIDEIGELHRCDAIIS 80
Cdd:COG2240    1 MKRVLSIQSHVVYGHVGNSAAVPPLSALGVEVWPLPTVLLSNHTGYGTFTGRDLPTDDIADILDGWKELGVLLEFDAVLS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547  81 GYIGSADQVEEIVNAVNYVKQRNPNAVYLCDPVMGHPDKGCIVADGVKEGLVKIAMKAADIITPNLVELRELSGLTVDNF 160
Cdd:COG2240   81 GYLGSAEQGDIIADFVARVKAANPDALYLCDPVMGDNGKGYYVFPGIAEFIMRRLVPLADIITPNLTELALLTGRPYETL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547 161 SQAIEAVKVILAQGPKKVLVKHLSKVGQDSTKFEMLLANQEGIWHISRPLHTFAkdPVGVGDLTAGLFMANLLNGKSDIE 240
Cdd:COG2240  161 EEALAAARALLALGPKIVVVTSVPLDDTPADKIGNLAVTADGAWLVETPLLPFS--PNGTGDLFAALLLAHLLRGKSLEE 238
                        250       260       270
                 ....*....|....*....|....*....|....
gi 737522547 241 AFEHTANAVNEVMQITHDSGLYELQIIAAREFIV 274
Cdd:COG2240  239 ALERAAAFVYEVLERTAAAGSDELLLEAALDELV 272
pyridoxal_pyridoxamine_kinase cd01173
Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5 ...
3-258 4.66e-110

Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5'-phosphate (PLP), by catalyzing the phosphorylation of the precursor vitamin B6 in the presence of Zn2+ and ATP. Mammals are unable to synthesize PLP de novo and require its precursors in the form of vitamin B6 (pyridoxal, pyridoxine, and pyridoxamine) from their diet. Pyridoxal kinase encoding genes are also found in many other species including yeast and bacteria.


Pssm-ID: 238578 [Multi-domain]  Cd Length: 254  Bit Score: 318.76  E-value: 4.66e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547   3 NLISIQSHVVYGYAGNKSATFPMQLLGVDVWALNTVQFSNHTQYAKWTGMVLPKEQIGEIVRGIDEIGELHRCDAIISGY 82
Cdd:cd01173    1 RVLSIQSHVVHGYVGNSAAVFPLQRLGWDVDALPTVQFSNHTGYGTWTGFVLSAEELEDLLEGLEALGLLLEYDAVLTGY 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547  83 IGSADQVEEIVNAVNYVKQRNPNAVYLCDPVMGHPDKGCIVADGVKEGLVKIAMKAADIITPNLVELRELSGLTVDNFSQ 162
Cdd:cd01173   81 LGSAEQVEAVAEIVKRLKEKNPNLLYVCDPVMGDNGKLYVVAEEIVPVYRDLLVPLADIITPNQFELELLTGKKINDLED 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547 163 AIEAVKVILAQGPKKVLVKHLSkvGQDSTKFEMLLANQEGIWHISRPLHTFAKDPVGVGDLTAGLFMANLLNGKSDIEAF 242
Cdd:cd01173  161 AKAAARALHAKGPKTVVVTSVE--LADDDRIEMLGSTATEAWLVQRPKIPFPAYFNGTGDLFAALLLARLLKGKSLAEAL 238
                        250
                 ....*....|....*.
gi 737522547 243 EHTANAVNEVMQITHD 258
Cdd:cd01173  239 EKALNFVHEVLEATYE 254
Phos_pyr_kin pfam08543
Phosphomethylpyrimidine kinase; This enzyme EC:2.7.4.7 is part of the Thiamine pyrophosphate ...
56-183 1.10e-15

Phosphomethylpyrimidine kinase; This enzyme EC:2.7.4.7 is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes.


Pssm-ID: 430062 [Multi-domain]  Cd Length: 246  Bit Score: 74.44  E-value: 1.10e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547   56 KEQIGEIVRGIdeigelhRCDAIISGYIGSADQVEEIVNavnYVKQRNPNAVylCDPVM----GHPdkgcIVADGVKEGL 131
Cdd:pfam08543  49 AAQLDAVLEDI-------PVDAVKTGMLGSAEIIEAVAE---KLDKYGVPVV--LDPVMvaksGDS----LLDDEAIEAL 112
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 737522547  132 VKIAMKAADIITPNLVELRELSGLTVDNFSQAIEAVKVILAQGPKKVLVK--HL 183
Cdd:pfam08543 113 KEELLPLATLITPNLPEAEALTGRKIKTLEDMKEAAKKLLALGAKAVLIKggHL 166
 
Name Accession Description Interval E-value
PRK05756 PRK05756
pyridoxal kinase PdxY;
1-286 0e+00

pyridoxal kinase PdxY;


Pssm-ID: 235592 [Multi-domain]  Cd Length: 286  Bit Score: 511.72  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547   1 MKNLISIQSHVVYGYAGNKSATFPMQLLGVDVWALNTVQFSNHTQYAKWTGMVLPKEQIGEIVRGIDEIGELHRCDAIIS 80
Cdd:PRK05756   1 MKNILSIQSHVVYGHVGNSAAVFPMQRLGVNVWPLNTVQFSNHTGYGKWTGCVMPPSHLTEIVQGIADIGWLGECDAVLS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547  81 GYIGSADQVEEIVNAVNYVKQRNPNAVYLCDPVMGHPDKGCIVADGVKEGLVKIAMKAADIITPNLVELRELSGLTVDNF 160
Cdd:PRK05756  81 GYLGSAEQGEAILDAVRRVKAANPQALYFCDPVMGDPEKGCIVAPGVAEFLRDRALPAADIITPNLFELEWLSGRPVETL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547 161 SQAIEAVKVILAQGPKKVLVKHLSKVGQDSTKFEMLLANQEGIWHISRPLHTFAKDPVGVGDLTAGLFMANLLNGKSDIE 240
Cdd:PRK05756 161 EDAVAAARALIARGPKIVLVTSLARAGYPADRFEMLLVTADGAWHISRPLVDFMRQPVGVGDLTSALFLARLLQGGSLEE 240
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 737522547 241 AFEHTANAVNEVMQITHDSGLYELQIIAAREFIVNPRSHYQAVKIA 286
Cdd:PRK05756 241 ALEHTTAAVYEVMARTKERGSYELQLVAAQDSIATPRAMFQARRLA 286
pyridox_kin TIGR00687
pyridoxal kinase; E. coli has an enzyme PdxK that acts in vitro as a pyridoxine/pyridoxal ...
1-286 2.78e-145

pyridoxal kinase; E. coli has an enzyme PdxK that acts in vitro as a pyridoxine/pyridoxal/pyridoxamine kinase, but mutants lacking PdxK activity retain a specific pyridoxal kinase, PdxY. PdxY acts in the salvage pathway of pyridoxal 5'-phosphate biosynthesis. Mammalian forms of pyridoxal kinase are more similar to PdxY than to PdxK. The PdxK isozyme is omitted from the seed alignment but scores above the trusted cutoff.ThiD and related proteins form an outgroup. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridoxine]


Pssm-ID: 273221 [Multi-domain]  Cd Length: 287  Bit Score: 409.22  E-value: 2.78e-145
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547    1 MKNLISIQSHVVYGYAGNKSATFPMQLLGVDVWALNTVQFSNHTQYAKWTGMVLPKEQIGEIVRGIDEIGELHRCDAIIS 80
Cdd:TIGR00687   1 MKNVLSIQSHVVYGHVGNRAATFPLQRLGFEVWAVNTVQFSNHTGYGKWTGQVLPPDELHELVEGLEAINKLNQCDAVLS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547   81 GYIGSADQVEEIVNAVNYVKQRNPNAVYLCDPVMGHPDKGCIVADGVKEGLVKIAMKAADIITPNLVELRELSGLTVDNF 160
Cdd:TIGR00687  81 GYLGSAEQVAMVVGIVRQVKQANPQALYVCDPVMGDPWKGCYVAPDLLEVYREKAIPVADIITPNQFELELLTGRRINTE 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547  161 SQAIEAVKVILAQGPKKVLVKHLSKVG-QDSTKFEMLLANQEGIWHISRPLHTFAKDPVGVGDLTAGLFMANLLNGKSDI 239
Cdd:TIGR00687 161 EEALAAADALIAMGPDIVLVTHLIRAGsQRDRSFEGLVATQEGRWHISRPLAVFDPPPVGTGDLIAALLLATLLHGNSLK 240
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 737522547  240 EAFEHTANAVNEVMQITHDSGLYELQIIAAREFIVNPRSHYQAVKIA 286
Cdd:TIGR00687 241 EALEKTVSAVYHVLRTTIQLGKYELQPVAAQLEIRMPQSKFDAEKVE 287
PdxK COG2240
Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme transport and metabolism]; Pyridoxal ...
1-274 3.35e-130

Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme transport and metabolism]; Pyridoxal/pyridoxine/pyridoxamine kinase is part of the Pathway/BioSystem: Pyridoxal phosphate biosynthesis


Pssm-ID: 441841 [Multi-domain]  Cd Length: 272  Bit Score: 370.25  E-value: 3.35e-130
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547   1 MKNLISIQSHVVYGYAGNKSATFPMQLLGVDVWALNTVQFSNHTQYAKWTGMVLPKEQIGEIVRGIDEIGELHRCDAIIS 80
Cdd:COG2240    1 MKRVLSIQSHVVYGHVGNSAAVPPLSALGVEVWPLPTVLLSNHTGYGTFTGRDLPTDDIADILDGWKELGVLLEFDAVLS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547  81 GYIGSADQVEEIVNAVNYVKQRNPNAVYLCDPVMGHPDKGCIVADGVKEGLVKIAMKAADIITPNLVELRELSGLTVDNF 160
Cdd:COG2240   81 GYLGSAEQGDIIADFVARVKAANPDALYLCDPVMGDNGKGYYVFPGIAEFIMRRLVPLADIITPNLTELALLTGRPYETL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547 161 SQAIEAVKVILAQGPKKVLVKHLSKVGQDSTKFEMLLANQEGIWHISRPLHTFAkdPVGVGDLTAGLFMANLLNGKSDIE 240
Cdd:COG2240  161 EEALAAARALLALGPKIVVVTSVPLDDTPADKIGNLAVTADGAWLVETPLLPFS--PNGTGDLFAALLLAHLLRGKSLEE 238
                        250       260       270
                 ....*....|....*....|....*....|....
gi 737522547 241 AFEHTANAVNEVMQITHDSGLYELQIIAAREFIV 274
Cdd:COG2240  239 ALERAAAFVYEVLERTAAAGSDELLLEAALDELV 272
pyridoxal_pyridoxamine_kinase cd01173
Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5 ...
3-258 4.66e-110

Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5'-phosphate (PLP), by catalyzing the phosphorylation of the precursor vitamin B6 in the presence of Zn2+ and ATP. Mammals are unable to synthesize PLP de novo and require its precursors in the form of vitamin B6 (pyridoxal, pyridoxine, and pyridoxamine) from their diet. Pyridoxal kinase encoding genes are also found in many other species including yeast and bacteria.


Pssm-ID: 238578 [Multi-domain]  Cd Length: 254  Bit Score: 318.76  E-value: 4.66e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547   3 NLISIQSHVVYGYAGNKSATFPMQLLGVDVWALNTVQFSNHTQYAKWTGMVLPKEQIGEIVRGIDEIGELHRCDAIISGY 82
Cdd:cd01173    1 RVLSIQSHVVHGYVGNSAAVFPLQRLGWDVDALPTVQFSNHTGYGTWTGFVLSAEELEDLLEGLEALGLLLEYDAVLTGY 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547  83 IGSADQVEEIVNAVNYVKQRNPNAVYLCDPVMGHPDKGCIVADGVKEGLVKIAMKAADIITPNLVELRELSGLTVDNFSQ 162
Cdd:cd01173   81 LGSAEQVEAVAEIVKRLKEKNPNLLYVCDPVMGDNGKLYVVAEEIVPVYRDLLVPLADIITPNQFELELLTGKKINDLED 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547 163 AIEAVKVILAQGPKKVLVKHLSkvGQDSTKFEMLLANQEGIWHISRPLHTFAKDPVGVGDLTAGLFMANLLNGKSDIEAF 242
Cdd:cd01173  161 AKAAARALHAKGPKTVVVTSVE--LADDDRIEMLGSTATEAWLVQRPKIPFPAYFNGTGDLFAALLLARLLKGKSLAEAL 238
                        250
                 ....*....|....*.
gi 737522547 243 EHTANAVNEVMQITHD 258
Cdd:cd01173  239 EKALNFVHEVLEATYE 254
PTZ00344 PTZ00344
pyridoxal kinase; Provisional
2-285 8.83e-63

pyridoxal kinase; Provisional


Pssm-ID: 240372 [Multi-domain]  Cd Length: 296  Bit Score: 199.92  E-value: 8.83e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547   2 KNLISIQSHVVYGYAGNKSATFPMQLLGVDVWALNTVQFSNHTQYAKWTGMVLPKEQIGEIVRGIDEIGELHRCDAIISG 81
Cdd:PTZ00344   5 KKVLSIQSHVTHGYVGNRAATFPLQLLGFDVDFVNTVQLSNHTGYPVIKGHRLDLNELITLMDGLRANNLLSDYTYVLTG 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547  82 YIGSADQVEEIVNAVNYVKQRNPNAVYLCDPVMGhpDKGCIVadgVKEGLVKI---AMKAADIITPNLVELRELSGLTVD 158
Cdd:PTZ00344  85 YINSADILREVLATVKEIKELRPKLIFLCDPVMG--DDGKLY---VKEEVVDAyreLIPYADVITPNQFEASLLSGVEVK 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547 159 NFSQAIEAVKVILAQGPKKVLVKHLsKVGQDSTKFEMLLANQEGI------WHISRPLHTFakDPVGVGDLTAGLFMANL 232
Cdd:PTZ00344 160 DLSDALEAIDWFHEQGIPVVVITSF-REDEDPTHLRFLLSCRDKDtknnkrFTGKVPYIEG--RYTGTGDLFAALLLAFS 236
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 737522547 233 LNGKSDiEAFEHTANAVNEVMQITHDSGL--------YELQIIAAREFIVNPRSHYQAVKI 285
Cdd:PTZ00344 237 HQHPMD-LAVGKAMGVLQDIIKATRESGGsgssslmsRELRLIQSPRDLLNPETVFKVTPL 296
PLN02978 PLN02978
pyridoxal kinase
5-285 5.92e-52

pyridoxal kinase


Pssm-ID: 215529 [Multi-domain]  Cd Length: 308  Bit Score: 172.23  E-value: 5.92e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547   5 ISIQSHVVYGYAGNKSATFPMQLLGVDVWALNTVQFSNHTQYAKWTGMVLPKEQIGEIVRGIDEIGELHRCDaIISGYIG 84
Cdd:PLN02978  18 LSIQSHTVHGYVGNKSAVFPLQLLGFDVDPINSVQFSNHTGYPTFKGQVLDGEQLWALIEGLEANGLLFYTH-LLTGYIG 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547  85 SADQVEEIVNAVNYVKQRNPNAVYLCDPVMGhpDKGCIVadgVKEGLVKI----AMKAADIITPNLVELRELSGLTVDNF 160
Cdd:PLN02978  97 SVSFLRTVLRVVKKLRSVNPNLTYVCDPVLG--DEGKLY---VPPELVPVyrekVVPLATMLTPNQFEAEQLTGIRIVTE 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547 161 SQAIEAVKVILAQGPKKVLV------KHLSKVGqdSTKFEMLLANQEgiWHISRPlhtfaKDP---VGVGDLTAGLFMAN 231
Cdd:PLN02978 172 EDAREACAILHAAGPSKVVItsididGKLLLVG--SHRKEKGARPEQ--FKIVIP-----KIPayfTGTGDLMAALLLGW 242
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 737522547 232 LLNGKSDIE-AFEHTANAVNEVMQITHD----------SGLYELQIIAAREFIVNPRSHYQAVKI 285
Cdd:PLN02978 243 SHKYPDNLDkAAELAVSSLQAVLRRTLAdykragadpkSSSLELRLVQSQDDIRHPQVRFKAERY 307
pdxK PRK08176
pyridoxine/pyridoxal/pyridoxamine kinase;
3-266 2.58e-38

pyridoxine/pyridoxal/pyridoxamine kinase;


Pssm-ID: 181269 [Multi-domain]  Cd Length: 281  Bit Score: 135.94  E-value: 2.58e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547   3 NLISIQSHVVYGYAGNKSATFPMQLLGVDVWALNTVQFSNHTQYAKWTGMVLPKEQIGEIVRGIDEIGELHRCDAIISGY 82
Cdd:PRK08176  17 DIVAVQSQVVYGSVGNSIAVPAIKANGLRVFAVPTVLLSNTPHYPTFYGGAIPDEWFSGYLRALQERDALRQLRAVTTGY 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547  83 IGSADQVEEIVNAVNYVKQRNPNAVYLCDPVMGHPDKGCIVADGVKEGLVKIAMKAADIITPNLVELRELSGLTVDNFSQ 162
Cdd:PRK08176  97 MGSASQIKILAEWLTALRADHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQHLLPLAQGLTPNIFELEILTGKPCRTLDS 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547 163 AIEAVKVILAQGPKKVLVKhlSKVGQDST-KFEMLLANQEGIWHISRPLHtfAKDPVGVGDLTAGLFMANLLNGKSDIEA 241
Cdd:PRK08176 177 AIAAAKSLLSDTLKWVVIT--SAAGNEENqEMQVVVVTADSVNVISHPRV--DTDLKGTGDLFCAELVSGLLKGKALTDA 252
                        250       260
                 ....*....|....*....|....*
gi 737522547 242 FEHTANAVNEVMQITHDSGLYELQI 266
Cdd:PRK08176 253 AHRAGLRVLEVMRYTQQAGSDELIL 277
Phos_pyr_kin pfam08543
Phosphomethylpyrimidine kinase; This enzyme EC:2.7.4.7 is part of the Thiamine pyrophosphate ...
56-183 1.10e-15

Phosphomethylpyrimidine kinase; This enzyme EC:2.7.4.7 is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes.


Pssm-ID: 430062 [Multi-domain]  Cd Length: 246  Bit Score: 74.44  E-value: 1.10e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547   56 KEQIGEIVRGIdeigelhRCDAIISGYIGSADQVEEIVNavnYVKQRNPNAVylCDPVM----GHPdkgcIVADGVKEGL 131
Cdd:pfam08543  49 AAQLDAVLEDI-------PVDAVKTGMLGSAEIIEAVAE---KLDKYGVPVV--LDPVMvaksGDS----LLDDEAIEAL 112
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 737522547  132 VKIAMKAADIITPNLVELRELSGLTVDNFSQAIEAVKVILAQGPKKVLVK--HL 183
Cdd:pfam08543 113 KEELLPLATLITPNLPEAEALTGRKIKTLEDMKEAAKKLLALGAKAVLIKggHL 166
ThiD COG0351
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme transport and metabolism]; ...
76-209 2.30e-13

Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme transport and metabolism]; Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase is part of the Pathway/BioSystem: Thiamine biosynthesis


Pssm-ID: 440120 [Multi-domain]  Cd Length: 254  Bit Score: 68.14  E-value: 2.30e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547  76 DAIISGYIGSADQVEEIVNAVNyvKQRNPNAVylCDPVM----GHPdkgcIVADGVKEGLVKIAMKAADIITPNLVELRE 151
Cdd:COG0351   68 DAIKIGMLGSAEIIEAVAEILA--DYPLVPVV--LDPVMvaksGDR----LLDEDAVEALRELLLPLATVVTPNLPEAEA 139
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547 152 LSGLTVDNFSQAIEAVKVILAQGPKKVLVK--HLSkvGQDSTKfemLLANQEGIWHISRP 209
Cdd:COG0351  140 LLGIEITTLDDMREAAKALLELGAKAVLVKggHLP--GDEAVD---VLYDGDGVREFSAP 194
PRK07105 PRK07105
pyridoxamine kinase; Validated
25-256 1.08e-12

pyridoxamine kinase; Validated


Pssm-ID: 180840 [Multi-domain]  Cd Length: 284  Bit Score: 66.86  E-value: 1.08e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547  25 MQLLGVDVWALNTVQFSNHT----QYAKWTGMVlpkeqigEIVRGIDEIGELH-RCDAIISGYIGSADQVEEIVNAVNYV 99
Cdd:PRK07105  28 MSSMGLQVCPLPTALLSSHTggfqNPSIIDLTD-------GMQAFLTHWKSLNlKFDAIYSGYLGSPRQIQIVSDFIKYF 100
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547 100 KQrnPNAVYLCDPVMGhpDKGCiVADGVKEGLVKiAMK----AADIITPNLVE---LRELSGLTVDNFSQAIEAVKVILA 172
Cdd:PRK07105 101 KK--KDLLVVVDPVMG--DNGK-LYQGFDQEMVE-EMRkliqKADVITPNLTEaclLLDKPYLEKSYSEEEIKQLLRKLA 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547 173 Q-GPKKVLVKHLSkVGQDSTKFEMLLANQEGIWHISR---PLHTFakdpvGVGDLTAGLFMANLLNGKSDIEAFEHTANA 248
Cdd:PRK07105 175 DlGPKIVIITSVP-FEDGKIGVAYYDRATDRFWKVFCkyiPAHYP-----GTGDIFTSVITGSLLQGDSLPIALDRAVQF 248

                 ....*...
gi 737522547 249 VNEVMQIT 256
Cdd:PRK07105 249 IEKGIRAT 256
PRK06427 PRK06427
bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed
61-184 8.59e-12

bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed


Pssm-ID: 180561 [Multi-domain]  Cd Length: 266  Bit Score: 63.99  E-value: 8.59e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547  61 EIVRG-IDEIGELHRCDAIISGYIGSADQVEEIVNAVnyvkQRNPNAVYLCDPVM----GHPdkgcIVADGVKEGLVKIA 135
Cdd:PRK06427  59 EFVAAqLDAVFSDIRIDAVKIGMLASAEIIETVAEAL----KRYPIPPVVLDPVMiaksGDP----LLADDAVAALRERL 130
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 737522547 136 MKAADIITPNLVELRELSGLTVDNF-SQAIEAVKVILAQGPKKVLVK--HLS 184
Cdd:PRK06427 131 LPLATLITPNLPEAEALTGLPIADTeDEMKAAARALHALGCKAVLIKggHLL 182
PfkB pfam00294
pfkB family carbohydrate kinase; This family includes a variety of carbohydrate and pyrimidine ...
139-249 2.15e-11

pfkB family carbohydrate kinase; This family includes a variety of carbohydrate and pyrimidine kinases.


Pssm-ID: 425587 [Multi-domain]  Cd Length: 294  Bit Score: 63.13  E-value: 2.15e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547  139 ADIITPNLVELRELSGLTVDNFSQAIEAVKVILAQGPKKVLVKHlskvGQDSTkfemLLANQEGIWHISRPLHTFAKDPV 218
Cdd:pfam00294 181 ADLLKPNEEELEALTGAKLDDIEEALAALHKLLAKGIKTVIVTL----GADGA----LVVEGDGEVHVPAVPKVKVVDTT 252
                          90       100       110
                  ....*....|....*....|....*....|.
gi 737522547  219 GVGDLTAGLFMANLLNGKSDIEAFEHtANAV 249
Cdd:pfam00294 253 GAGDSFVGGFLAGLLAGKSLEEALRF-ANAA 282
FruK COG1105
1-phosphofructokinase or 6-phosphofructokinase II [Carbohydrate transport and metabolism];
135-242 3.79e-11

1-phosphofructokinase or 6-phosphofructokinase II [Carbohydrate transport and metabolism];


Pssm-ID: 440722 [Multi-domain]  Cd Length: 304  Bit Score: 62.46  E-value: 3.79e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547 135 AMKAA-----DIITPNLVELRELSGLTVDNFSQAIEAVKVILAQGPKKVLVKhLSKVGqdstkfeMLLANQEGIWHIsRP 209
Cdd:COG1105  169 ALKAAleagpDLIKPNLEELEELLGRPLETLEDIIAAARELLERGAENVVVS-LGADG-------ALLVTEDGVYRA-KP 239
                         90       100       110
                 ....*....|....*....|....*....|....
gi 737522547 210 LHTFAKDPVGVGD-LTAGlFMANLLNGKSDIEAF 242
Cdd:COG1105  240 PKVEVVSTVGAGDsMVAG-FLAGLARGLDLEEAL 272
ribokinase cd01174
Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This ...
136-249 6.84e-10

Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution.


Pssm-ID: 238579 [Multi-domain]  Cd Length: 292  Bit Score: 58.72  E-value: 6.84e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547 136 MKAADIITPNLVELRELSGLTVDNFSQAIEAVKVILAQGPKKVLVKhLSKVGqdstkfemLLANQEGIWHISRPLHTFAK 215
Cdd:cd01174  173 LALVDILVPNETEAALLTGIEVTDEEDAEKAARLLLAKGVKNVIVT-LGAKG--------ALLASGGEVEHVPAFKVKAV 243
                         90       100       110
                 ....*....|....*....|....*....|....
gi 737522547 216 DPVGVGDLTAGLFMANLLNGKSDIEAFEHtANAV 249
Cdd:cd01174  244 DTTGAGDTFIGALAAALARGLSLEEAIRF-ANAA 276
FruK_PfkB_like cd01164
1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases. ...
140-242 3.04e-09

1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases. FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis.


Pssm-ID: 238570 [Multi-domain]  Cd Length: 289  Bit Score: 56.77  E-value: 3.04e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547 140 DIITPNLVELRELSGLTVDNFSQAIEAVKVILAQGPKKVLVkhlsKVGQDstkfEMLLANQEGIWHiSRPLHTFAKDPVG 219
Cdd:cd01164  179 FLIKPNREELEELFGRPLGDEEDVIAAARKLIERGAENVLV----SLGAD----GALLVTKDGVYR-ASPPKVKVVSTVG 249
                         90       100
                 ....*....|....*....|...
gi 737522547 220 VGDLTAGLFMANLLNGKSDIEAF 242
Cdd:cd01164  250 AGDSMVAGFVAGLAQGLSLEEAL 272
PRK12412 PRK12412
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;
1-189 6.38e-08

bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;


Pssm-ID: 183512 [Multi-domain]  Cd Length: 268  Bit Score: 52.66  E-value: 6.38e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547   1 MKNLISIQSHVVYGYAGNKSATFPMQLLGV-DVWALNT-VQFSNHTQyakWTGMVLP------KEQIGEIVRGIDeigel 72
Cdd:PRK12412   1 LNKALTIAGSDTSGGAGIQADLKTFQELGVyGMTSLTTiVTMDPHNG---WAHNVFPipastlKPQLETTIEGVG----- 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547  73 hrCDAIISGYIGSADQVEEIVNAVNyvKQRNPNAVylCDPVMG--------HPDKgcivADGVKEGLVKiamkAADIITP 144
Cdd:PRK12412  73 --VDALKTGMLGSVEIIEMVAETIE--KHNFKNVV--VDPVMVckgadealHPET----NDCLRDVLVP----KALVVTP 138
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 737522547 145 NLVELRELSGLTVDNFSQAIEAVKVILAQGPKKVLVKHLSKVGQD 189
Cdd:PRK12412 139 NLFEAYQLSGVKINSLEDMKEAAKKIHALGAKYVLIKGGSKLGTE 183
ribokinase_pfkB_like cd00287
ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including ...
77-228 1.54e-07

ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group. The superfamily includes ribokinase, fructokinase, ketohexokinase, 2-dehydro-3-deoxygluconokinase, 1-phosphofructokinase, the minor 6-phosphofructokinase (PfkB), inosine-guanosine kinase, and adenosine kinase. Even though there is a high degree of structural conservation within this superfamily, their multimerization level varies widely, monomeric (e.g. adenosine kinase), dimeric (e.g. ribokinase), and trimeric (e.g THZ kinase).


Pssm-ID: 238177 [Multi-domain]  Cd Length: 196  Bit Score: 50.56  E-value: 1.54e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547  77 AIISGYIGSADQVEEIVNAVnyvkqRNPNAVYLCDPVMGhpdkgciVADGVKEGLVKiAMKAADIITPNLVELRELSGLT 156
Cdd:cd00287   61 VVISGLSPAPEAVLDALEEA-----RRRGVPVVLDPGPR-------AVRLDGEELEK-LLPGVDILTPNEEEAEALTGRR 127
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 737522547 157 VDNFSQAIEAVKVILAQGPKKVLVKHLSKVGqdstkfemLLANQEGIWHISRPLHTFAKDPVGVGD-LTAGLF 228
Cdd:cd00287  128 DLEVKEAAEAAALLLSKGPKVVIVTLGEKGA--------IVATRGGTEVHVPAFPVKVVDTTGAGDaFLAALA 192
RbsK COG0524
Sugar or nucleoside kinase, ribokinase family [Carbohydrate transport and metabolism]; Sugar ...
135-249 1.85e-07

Sugar or nucleoside kinase, ribokinase family [Carbohydrate transport and metabolism]; Sugar or nucleoside kinase, ribokinase family is part of the Pathway/BioSystem: Glycolysis


Pssm-ID: 440290 [Multi-domain]  Cd Length: 301  Bit Score: 51.42  E-value: 1.85e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547 135 AMKAADIITPNLVELRELSGLTvdnfsQAIEAVKVILAQGPKKVLVKHlskvGQDStkfeMLLANQEGIWHI-SRPLHtf 213
Cdd:COG0524  182 LLALVDILFPNEEEAELLTGET-----DPEEAAAALLARGVKLVVVTL----GAEG----ALLYTGGEVVHVpAFPVE-- 246
                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 737522547 214 AKDPVGVGDLTAGLFMANLLNGKSDIEAFEHtANAV 249
Cdd:COG0524  247 VVDTTGAGDAFAAGFLAGLLEGLDLEEALRF-ANAA 281
ribokinase_group_C cd01946
Ribokinase-like subgroup C. Found only in bacteria, this subgroup is part of the ribokinase ...
125-241 1.92e-06

Ribokinase-like subgroup C. Found only in bacteria, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.


Pssm-ID: 238921 [Multi-domain]  Cd Length: 277  Bit Score: 48.23  E-value: 1.92e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547 125 DGVKEGLVKIaMKAADIITPNLVELRELSGLtvdnfSQAIEAVKVILAQGPKKVLVKHlskvgqdsTKFEMLLANQEGIW 204
Cdd:cd01946  151 SIKPEKLKKV-LAKVDVVIINDGEARQLTGA-----ANLVKAARLILAMGPKALIIKR--------GEYGALLFTDDGYF 216
                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 737522547 205 HI-SRPLHTFAkDPVGVGDLTAGLFMANLLNGKSDIEA 241
Cdd:cd01946  217 AApAYPLESVF-DPTGAGDTFAGGFIGYLASQKDTSEA 253
PRK12413 PRK12413
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;
95-260 2.69e-05

bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;


Pssm-ID: 183513 [Multi-domain]  Cd Length: 253  Bit Score: 44.67  E-value: 2.69e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547  95 AVNYVKQRNPNAVYLcDPVMGHPDKGCIVADGVKEGLVKIaMKAADIITPNLVELRELSGLTVDNFSQAIEAVKVILAQG 174
Cdd:PRK12413  88 ALDFIKGHPGIPVVL-DPVLVCKETHDVEVSELRQELIQF-FPYVTVITPNLVEAELLSGKEIKTLEDMKEAAKKLYDLG 165
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547 175 PKKVLVKHLSKVGQ--------DSTKFEMLlanqegiwhiSRPLhtFAKDPVGVGDLTAGLFMANLLNGKSDIEAFEHTA 246
Cdd:PRK12413 166 AKAVVIKGGNRLSQkkaidlfyDGKEFVIL----------ESPV--LEKNNIGAGCTFASSIASQLVKGKSPLEAVKNSK 233
                        170
                 ....*....|....
gi 737522547 247 NAVNEVMQITHDSG 260
Cdd:PRK12413 234 DFVYQAIQQSDQYG 247
PRK08573 PRK08573
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;
54-184 2.76e-05

bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;


Pssm-ID: 236297 [Multi-domain]  Cd Length: 448  Bit Score: 45.10  E-value: 2.76e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547  54 LPKEQIGEIVRGI-DEIGelhrCDAIISGYIGSADQVEEIVNAVNyvKQRNPNAVylcDPVM----GHPdkgcIVADGVK 128
Cdd:PRK08573  54 LPPEVVAAQIEAVwEDMG----IDAAKTGMLSNREIIEAVAKTVS--KYGFPLVV---DPVMiaksGAP----LLREDAV 120
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 737522547 129 EGLVKIAMKAADIITPNLVELRELSGLTVDNFSQAIEAVKVILAQ-GPKKVLVK--HLS 184
Cdd:PRK08573 121 DALIKRLLPLATVVTPNRPEAEKLTGMKIRSVEDARKAAKYIVEElGAEAVVVKggHLE 179
PRK09517 PRK09517
multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; ...
76-184 6.53e-05

multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional


Pssm-ID: 169939 [Multi-domain]  Cd Length: 755  Bit Score: 44.19  E-value: 6.53e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547  76 DAIISGYIGSADQVEEIvnaVNYVKQRNPNAVYLcDPVMGHPDKGCIVADGVKEGLVKIAMkAADIITPNLVELRELSG- 154
Cdd:PRK09517 312 DAVKLGMLGSADTVDLV---ASWLGSHEHGPVVL-DPVMVATSGDRLLDADATEALRRLAV-HVDVVTPNIPELAVLCGe 386
                         90       100       110
                 ....*....|....*....|....*....|..
gi 737522547 155 LTVDNFSQAIEAVKVILAQGPKKVLVK--HLS 184
Cdd:PRK09517 387 APAITMDEAIAQARGFARTHGTIVIVKggHLT 418
PRK12616 PRK12616
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;
49-189 6.79e-05

bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;


Pssm-ID: 183624  Cd Length: 270  Bit Score: 43.50  E-value: 6.79e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547  49 WTGMVLP------KEQIGEIVRGIDeigelhrCDAIISGYIGSADQVEEivnAVNYVKQRNPNAVYLcDPVMghpdkgci 122
Cdd:PRK12616  50 WDHQVFPidtdtiRAQLSTIVDGIG-------VDAMKTGMLPTVDIIEL---AADTIKEKQLKNVVI-DPVM-------- 110
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 737522547 123 VADGVKEGLVKIAMKA--------ADIITPNLVELRELSGL-TVDNFSQAIEAVKVILAQGPKKVLVKHLSKVGQD 189
Cdd:PRK12616 111 VCKGANEVLYPEHAEAlreqlaplATVITPNLFEAGQLSGMgEIKTVEQMKEAAKKIHELGAQYVVITGGGKLKHE 186
PLN02898 PLN02898
HMP-P kinase/thiamin-monophosphate pyrophosphorylase
76-181 4.22e-04

HMP-P kinase/thiamin-monophosphate pyrophosphorylase


Pssm-ID: 215486 [Multi-domain]  Cd Length: 502  Bit Score: 41.68  E-value: 4.22e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547  76 DAIISGYIGSAdqveEIVNAVNYVKQRNPNAVYLCDPVM----GHPDKGCIVADGVKEGLVKIAmkaaDIITPNLVELRE 151
Cdd:PLN02898  80 DVVKTGMLPSA----EIVKVLCQALKEFPVKALVVDPVMvstsGDVLAGPSILSALREELLPLA----TIVTPNVKEASA 151
                         90       100       110
                 ....*....|....*....|....*....|.
gi 737522547 152 L-SGLTVDNFSQAIEAVKVILAQGPKKVLVK 181
Cdd:PLN02898 152 LlGGDPLETVADMRSAAKELHKLGPRYVLVK 182
YeiC_kinase_like cd01941
YeiC-like sugar kinase. Found in eukaryotes and bacteria, YeiC-like kinase is part of the ...
137-241 5.73e-04

YeiC-like sugar kinase. Found in eukaryotes and bacteria, YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.


Pssm-ID: 238916 [Multi-domain]  Cd Length: 288  Bit Score: 40.76  E-value: 5.73e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547 137 KAADIITPNLVELRELSGLTVDNFSQAIEAVKVILAQGPKKVLVKHLSKvgqdstkfEMLLANQEG---IWHISRPLHTF 213
Cdd:cd01941  175 HAIDLLTPNRAELEALAGALIENNEDENKAAKILLLPGIKNVIVTLGAK--------GVLLSSREGgveTKLFPAPQPET 246
                         90       100
                 ....*....|....*....|....*....
gi 737522547 214 AKDPVGVGD-LTAGLFMAnLLNGKSDIEA 241
Cdd:cd01941  247 VVNVTGAGDaFVAGLVAG-LLEGMSLDDS 274
RfaE_like cd01172
RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the ...
139-232 6.59e-04

RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose. LPS plays an important role in maintaining the structural integrity of the bacterial outer membrane of gram-negative bacteria. RfaE consists of two domains, a sugar kinase domain, represented here, and a domain belonging to the cytidylyltransferase superfamily.


Pssm-ID: 238577 [Multi-domain]  Cd Length: 304  Bit Score: 40.62  E-value: 6.59e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737522547 139 ADIITPNLVELRELSGLTVDNFSQAIEAVKVILAQ-GPKKVLVKHlskvgqdSTKFEMLLANQEGIWHIsrPlhTFAKDP 217
Cdd:cd01172  182 ATLLTPNEKEAREALGDEINDDDELEAAGEKLLELlNLEALLVTL-------GEEGMTLFERDGEVQHI--P--ALAKEV 250
                         90       100       110
                 ....*....|....*....|....*....|...
gi 737522547 218 V---GVGD-----LTAGL----------FMANL 232
Cdd:cd01172  251 YdvtGAGDtviatLALALaagadleeaaFLANA 283
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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