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Conserved domains on  [gi|738093797|ref|WP_036052448|]
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lysozyme inhibitor LprI family protein [Burkholderia gladioli]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
LprI super family cl01530
Lysozyme inhibitor LprI; This family consists of several bacterial proteins of around 120 ...
 31-115 1.39e-06

Lysozyme inhibitor LprI; This family consists of several bacterial proteins of around 120 residues in length. Members of this family contain four highly conserved cysteine residues. Family members include lipoprotein LprI from Mycobacterium, which binds to and inhibits macrophage lysozyme, which may aid bacterial survival.


The actual alignment was detected with superfamily member COG3755:

Pssm-ID: 470238  Cd Length: 121  Bit Score: 44.30  E-value: 1.39e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738093797  31 GLPASQVQALLQDCD--SNQTSMNFCAWRDQIVAERELQQVVDQRISEHPD--RKSALESKIAKWKKARDASCdKSARKE 106
Cdd:COG3755   11 LLASLSALAQAADCDnaQTQAEMNACAAKEYQKADKELNKAYKALMKRLSApeAKAALRKAQRAWIKYRDAEC-AFAAAA 89


                 ....*....
gi 738093797 107 WSDGSMLPA 115
Cdd:COG3755   90 YEGGSIAPL 98
DprA_WH pfam17782
DprA winged helix domain; This winged helix domain is found in the DprA protein.
 18-41 5.04e-04

DprA winged helix domain; This winged helix domain is found in the DprA protein.


:

Pssm-ID: 436040 [Multi-domain]  Cd Length: 61  Bit Score: 36.35  E-value: 5.04e-04
                          10        20
                  ....*....|....*....|....
gi 738093797   18 AEPSPADEIAARSGLPASQVQALL 41
Cdd:pfam17782  23 PDPVSVDELVRRTGLPAAEVSAAL 46
 
Name Accession Description Interval E-value
YecT COG3755
Uncharacterized conserved protein YecT, DUF1311 family [Function unknown];
31-115 1.39e-06

Uncharacterized conserved protein YecT, DUF1311 family [Function unknown];


Pssm-ID: 442969  Cd Length: 121  Bit Score: 44.30  E-value: 1.39e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738093797  31 GLPASQVQALLQDCD--SNQTSMNFCAWRDQIVAERELQQVVDQRISEHPD--RKSALESKIAKWKKARDASCdKSARKE 106
Cdd:COG3755   11 LLASLSALAQAADCDnaQTQAEMNACAAKEYQKADKELNKAYKALMKRLSApeAKAALRKAQRAWIKYRDAEC-AFAAAA 89


                 ....*....
gi 738093797 107 WSDGSMLPA 115
Cdd:COG3755   90 YEGGSIAPL 98
DprA_WH pfam17782
DprA winged helix domain; This winged helix domain is found in the DprA protein.
 18-41 5.04e-04

DprA winged helix domain; This winged helix domain is found in the DprA protein.


Pssm-ID: 436040 [Multi-domain]  Cd Length: 61  Bit Score: 36.35  E-value: 5.04e-04
                          10        20
                  ....*....|....*....|....
gi 738093797   18 AEPSPADEIAARSGLPASQVQALL 41
Cdd:pfam17782  23 PDPVSVDELVRRTGLPAAEVSAAL 46
Smf COG0758
Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake ...
 18-41 3.43e-03

Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake [Replication, recombination and repair];


Pssm-ID: 440521 [Multi-domain]  Cd Length: 360  Bit Score: 36.21  E-value: 3.43e-03
                         10        20
                 ....*....|....*....|....
gi 738093797  18 AEPSPADEIAARSGLPASQVQALL 41
Cdd:COG0758  317 PEPVSIDELARRTGLPVAEVLAAL 340
 
Name Accession Description Interval E-value
YecT COG3755
Uncharacterized conserved protein YecT, DUF1311 family [Function unknown];
31-115 1.39e-06

Uncharacterized conserved protein YecT, DUF1311 family [Function unknown];


Pssm-ID: 442969  Cd Length: 121  Bit Score: 44.30  E-value: 1.39e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738093797  31 GLPASQVQALLQDCD--SNQTSMNFCAWRDQIVAERELQQVVDQRISEHPD--RKSALESKIAKWKKARDASCdKSARKE 106
Cdd:COG3755   11 LLASLSALAQAADCDnaQTQAEMNACAAKEYQKADKELNKAYKALMKRLSApeAKAALRKAQRAWIKYRDAEC-AFAAAA 89


                 ....*....
gi 738093797 107 WSDGSMLPA 115
Cdd:COG3755   90 YEGGSIAPL 98
DprA_WH pfam17782
DprA winged helix domain; This winged helix domain is found in the DprA protein.
 18-41 5.04e-04

DprA winged helix domain; This winged helix domain is found in the DprA protein.


Pssm-ID: 436040 [Multi-domain]  Cd Length: 61  Bit Score: 36.35  E-value: 5.04e-04
                          10        20
                  ....*....|....*....|....
gi 738093797   18 AEPSPADEIAARSGLPASQVQALL 41
Cdd:pfam17782  23 PDPVSVDELVRRTGLPAAEVSAAL 46
Smf COG0758
Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake ...
 18-41 3.43e-03

Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake [Replication, recombination and repair];


Pssm-ID: 440521 [Multi-domain]  Cd Length: 360  Bit Score: 36.21  E-value: 3.43e-03
                         10        20
                 ....*....|....*....|....
gi 738093797  18 AEPSPADEIAARSGLPASQVQALL 41
Cdd:COG0758  317 PEPVSIDELARRTGLPVAEVLAAL 340
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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