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Conserved domains on  [gi|738467991|ref|WP_036418545|]
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hypothetical protein [Mycobacterium sp. 155]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Thump_like pfam18096
THUMP domain-like; This is a domain of unknown function found in bacteria.
 299-375 3.28e-09

THUMP domain-like; This is a domain of unknown function found in bacteria.


:

Pssm-ID: 465646  Cd Length: 76  Bit Score: 53.04  E-value: 3.28e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 738467991  299 LRGFEVLEQLGYHERRLREVLAARSVGAVEILVRGVNVDPDVLRRR-LRLRGAEQLSVVITRLGSGAAstATAFVCRP 375
Cdd:pfam18096   1 GRAFRILEVLPFSKKALKKLLRERGIGKAEIKKRGFPLDPEELRKKlKIKDGGRTATLFLTRVGKAGR--PVAILCER 76
 
Name Accession Description Interval E-value
Thump_like pfam18096
THUMP domain-like; This is a domain of unknown function found in bacteria.
 299-375 3.28e-09

THUMP domain-like; This is a domain of unknown function found in bacteria.


Pssm-ID: 465646  Cd Length: 76  Bit Score: 53.04  E-value: 3.28e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 738467991  299 LRGFEVLEQLGYHERRLREVLAARSVGAVEILVRGVNVDPDVLRRR-LRLRGAEQLSVVITRLGSGAAstATAFVCRP 375
Cdd:pfam18096   1 GRAFRILEVLPFSKKALKKLLRERGIGKAEIKKRGFPLDPEELRKKlKIKDGGRTATLFLTRVGKAGR--PVAILCER 76
 
Name Accession Description Interval E-value
Thump_like pfam18096
THUMP domain-like; This is a domain of unknown function found in bacteria.
 299-375 3.28e-09

THUMP domain-like; This is a domain of unknown function found in bacteria.


Pssm-ID: 465646  Cd Length: 76  Bit Score: 53.04  E-value: 3.28e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 738467991  299 LRGFEVLEQLGYHERRLREVLAARSVGAVEILVRGVNVDPDVLRRR-LRLRGAEQLSVVITRLGSGAAstATAFVCRP 375
Cdd:pfam18096   1 GRAFRILEVLPFSKKALKKLLRERGIGKAEIKKRGFPLDPEELRKKlKIKDGGRTATLFLTRVGKAGR--PVAILCER 76
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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