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Concise Results
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Full Results
MULTISPECIES: arginine/lysine/ornithine decarboxylase [Oligella]
Protein Classification
arginine/lysine/ornithine decarboxylase ( domain architecture ID 12046257 )
arginine/lysine/ornithine decarboxylase is a fold I pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily protein that catalyzes the decarboxylation of arginine, lysine, or ornithine
List of domain hits
Name
Accession
Description
Interval
E-value
PRK15399 super family
cl33137 lysine decarboxylase;
24-750
0e+00
lysine decarboxylase;
PRK15399 :Pssm-ID: 185297 [Multi-domain]
Cd Length: 713
Bit Score: 628.69
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 24 I RA L AD A IEEA G MEVLPVTSYG DL TS F VQQQS R ASAF I LSI D DEEF D sdspee VA S A I R QL rgfiaelrfr N DEI P I Y LH 103
Cdd:PRK15399 19 I KE L ES A LQAQ G FQTIWPQNSV DL LK F IEHNP R ICGV I FDW D EYSL D ------ LC S D I N QL ---------- N EYL P L Y AF 82
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 104 GE T rtse H LPN D I - LRELHGFIHM FE --- DTP E FV A RH I IHEAKK YLD TLA PPF FR AL VN Y AQD G S Y SWHC PGH S GG V A F 179
Cdd:PRK15399 83 IN T ---- H STM D V s VQDMRMALWF FE yal GAA E DI A IR I RQYTNE YLD NIT PPF TK AL FT Y VKE G K Y TFCT PGH M GG T A Y 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 180 L KSPVG QM F HQ FFG E N M L R ADV CNA V E ELG Q LLDHTGP VA E S E RNA AR I F K A DHC Y F VTNGTSTSNKIV WHGTVAE G DIV 259
Cdd:PRK15399 159 Q KSPVG CL F YD FFG G N T L K ADV SIS V T ELG S LLDHTGP HL E A E EYI AR T F G A EQS Y I VTNGTSTSNKIV GMYAAPA G STL 238
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 260 VV DRNCHKS IL H AIT M TGAI P VF L R PTRN H LGI I G P IP LS EF EPA SI AA K I AA NPF A realn KK P RILTL T QG TYDG I LY 339
Cdd:PRK15399 239 LI DRNCHKS LA H LLM M SDVV P IW L K PTRN A LGI L G G IP RR EF TRD SI EE K V AA TTQ A ----- QW P VHAVI T NS TYDG L LY 313
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 340 N VEM IK EK L gs TIDNL HFD E AW L P HAS FH DF Y ENMHAI - GE NR P rpq EPL IF A T H STHK L LA GL SQAS Q I VVQE setr QL 418
Cdd:PRK15399 314 N TDW IK QT L -- DVPSI HFD S AW V P YTH FH PI Y QGKSGM s GE RV P --- GKV IF E T Q STHK M LA AF SQAS L I HIKG ---- EY 384
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 419 D RNI FNEAF L MHTSTSP Q Y A I I AS CDV AA Q M MEPPG G TA L VEE S IRESMD FR RAMRKVASD yg K D E W W F KV W G P prlvh D 498
Cdd:PRK15399 385 D EET FNEAF M MHTSTSP S Y P I V AS VET AA A M LRGNP G KR L INR S VERALH FR KEVQRLREE -- S D G W F F DI W Q P ----- E 457
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 499 DIG E Q E D W LLE P DDE WHGF ANISEGFTM LDP I K A TI I TPG LEIS G EFG E R GIPA G LV S K Y L A E H GIVVEKTG L Y SFFIM F 578
Cdd:PRK15399 458 NVD E A E C W PVA P GEQ WHGF KDADADHMF LDP V K V TI L TPG MDEQ G NMS E E GIPA A LV A K F L D E R GIVVEKTG P Y NLLFL F 537
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 579 T IGI T K GRWNT L VTA L QQ FK DD YD R N QPLWRCM PD FVKQY P R - Y EK M GLG DL C Q LA H EAY R R HDL ARITTEVY -- L S EM E 655
Cdd:PRK15399 538 S IGI D K TKAMG L LRG L TE FK RA YD L N LRVKNML PD LYAED P D f Y RN M RIQ DL A Q GI H KLI R K HDL PGLMLRAF dv L P EM I 617
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 656 aa LR P AD A FNKMTRR E I E R V DIDA L E GR IT A VLLT PYPPG I PLL I PGE RF --- N R TIVEY L QFA C EFNASF PGFET IV HG 732
Cdd:PRK15399 618 -- MT P HQ A WQRQIKG E V E T V ALEQ L V GR VS A NMIL PYPPG V PLL M PGE MI tee S R AVLDF L LML C SIGQHY PGFET DI HG 695
730
....*....|....*...
gi 738649293 733 L sm EQG EDG sv R Y Y V DC L 750
Cdd:PRK15399 696 A -- KRD EDG -- V Y R V RV L 709
Name
Accession
Description
Interval
E-value
PRK15399
PRK15399 lysine decarboxylase;
24-750
0e+00
lysine decarboxylase;
Pssm-ID: 185297 [Multi-domain]
Cd Length: 713
Bit Score: 628.69
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 24 I RA L AD A IEEA G MEVLPVTSYG DL TS F VQQQS R ASAF I LSI D DEEF D sdspee VA S A I R QL rgfiaelrfr N DEI P I Y LH 103
Cdd:PRK15399 19 I KE L ES A LQAQ G FQTIWPQNSV DL LK F IEHNP R ICGV I FDW D EYSL D ------ LC S D I N QL ---------- N EYL P L Y AF 82
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 104 GE T rtse H LPN D I - LRELHGFIHM FE --- DTP E FV A RH I IHEAKK YLD TLA PPF FR AL VN Y AQD G S Y SWHC PGH S GG V A F 179
Cdd:PRK15399 83 IN T ---- H STM D V s VQDMRMALWF FE yal GAA E DI A IR I RQYTNE YLD NIT PPF TK AL FT Y VKE G K Y TFCT PGH M GG T A Y 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 180 L KSPVG QM F HQ FFG E N M L R ADV CNA V E ELG Q LLDHTGP VA E S E RNA AR I F K A DHC Y F VTNGTSTSNKIV WHGTVAE G DIV 259
Cdd:PRK15399 159 Q KSPVG CL F YD FFG G N T L K ADV SIS V T ELG S LLDHTGP HL E A E EYI AR T F G A EQS Y I VTNGTSTSNKIV GMYAAPA G STL 238
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 260 VV DRNCHKS IL H AIT M TGAI P VF L R PTRN H LGI I G P IP LS EF EPA SI AA K I AA NPF A realn KK P RILTL T QG TYDG I LY 339
Cdd:PRK15399 239 LI DRNCHKS LA H LLM M SDVV P IW L K PTRN A LGI L G G IP RR EF TRD SI EE K V AA TTQ A ----- QW P VHAVI T NS TYDG L LY 313
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 340 N VEM IK EK L gs TIDNL HFD E AW L P HAS FH DF Y ENMHAI - GE NR P rpq EPL IF A T H STHK L LA GL SQAS Q I VVQE setr QL 418
Cdd:PRK15399 314 N TDW IK QT L -- DVPSI HFD S AW V P YTH FH PI Y QGKSGM s GE RV P --- GKV IF E T Q STHK M LA AF SQAS L I HIKG ---- EY 384
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 419 D RNI FNEAF L MHTSTSP Q Y A I I AS CDV AA Q M MEPPG G TA L VEE S IRESMD FR RAMRKVASD yg K D E W W F KV W G P prlvh D 498
Cdd:PRK15399 385 D EET FNEAF M MHTSTSP S Y P I V AS VET AA A M LRGNP G KR L INR S VERALH FR KEVQRLREE -- S D G W F F DI W Q P ----- E 457
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 499 DIG E Q E D W LLE P DDE WHGF ANISEGFTM LDP I K A TI I TPG LEIS G EFG E R GIPA G LV S K Y L A E H GIVVEKTG L Y SFFIM F 578
Cdd:PRK15399 458 NVD E A E C W PVA P GEQ WHGF KDADADHMF LDP V K V TI L TPG MDEQ G NMS E E GIPA A LV A K F L D E R GIVVEKTG P Y NLLFL F 537
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 579 T IGI T K GRWNT L VTA L QQ FK DD YD R N QPLWRCM PD FVKQY P R - Y EK M GLG DL C Q LA H EAY R R HDL ARITTEVY -- L S EM E 655
Cdd:PRK15399 538 S IGI D K TKAMG L LRG L TE FK RA YD L N LRVKNML PD LYAED P D f Y RN M RIQ DL A Q GI H KLI R K HDL PGLMLRAF dv L P EM I 617
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 656 aa LR P AD A FNKMTRR E I E R V DIDA L E GR IT A VLLT PYPPG I PLL I PGE RF --- N R TIVEY L QFA C EFNASF PGFET IV HG 732
Cdd:PRK15399 618 -- MT P HQ A WQRQIKG E V E T V ALEQ L V GR VS A NMIL PYPPG V PLL M PGE MI tee S R AVLDF L LML C SIGQHY PGFET DI HG 695
730
....*....|....*...
gi 738649293 733 L sm EQG EDG sv R Y Y V DC L 750
Cdd:PRK15399 696 A -- KRD EDG -- V Y R V RV L 709
LdcC
COG1982 Arginine/lysine/ornithine decarboxylase [Amino acid transport and metabolism];
145-727
0e+00
Arginine/lysine/ornithine decarboxylase [Amino acid transport and metabolism];
Pssm-ID: 441585 [Multi-domain]
Cd Length: 486
Bit Score: 541.24
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 145 Y L D T L AP P F F R AL VN YA QD G SY S W H C PGH S GG VA F lkspv G QM F HQ FFGEN ML R A D VCN a VEE L GQ L L D HT G PVA E SERN 224
Cdd:COG1982 1 Y M D Q L LT P L F D AL KK YA ER G PV S F H V PGH K GG RG F ----- G RE F YD FFGEN VF R L D LTE - LPG L DD L H D PE G VIK E AQEL 74
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 225 AA RI F K AD HCY F VT NGTS TS NK IVWHGTVAE GD I V V V D RNCHKS IL H AITMT GAIPV F L R P T - R N H LGIIG P I PLSEF E P 303
Cdd:COG1982 75 AA EA F G AD RTF F LV NGTS SG NK AMILAVCGP GD K V L V P RNCHKS VI H GLILS GAIPV Y L N P E i D N E LGIIG G I TPEAV E E 154
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 304 A siaak IAAN P F A REA L nkkprilt L T QG TY D G IL Y NVEM I K E KLGSTIDNLHF DEA WLP H AS FH DFY enmhaigenrpr 383
Cdd:COG1982 155 A ----- LIEH P D A KAV L -------- I T NP TY Y G VC Y DLKA I A E LAHEHGIPVLV DEA HGA H FG FH PDL ------------ 209
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 384 P QEPL ---- IFATH STHK L L AG L S Q A S QIV V QESE trq L D RNIF NEA FLMHT STSP Q Y AII AS C DVA AQM M EPP g G TA L V 459
Cdd:COG1982 210 P RSAM eaga DLVVQ STHK T L GA L T Q S S MLH V KGGR --- V D HERV NEA LMLLQ STSP S Y LLM AS L DVA RRQ M AGE - G EE L L 285
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 460 E E SIRESMDF R RAMR K V asdygkde WWFK V W GP prlvh D D I G E qedwllepddewhgfanis E G FTM LDP I K A TI IT PGL 539
Cdd:COG1982 286 D E ALELAIEA R KEIN K I -------- PGLY V F GP ----- E D L G A ------------------- P G VYD LDP T K L TI DV PGL 333
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 540 eisgefger GI PAGL V SK YL A E H - GI V VE KTG LY SFFIMFTI G I TK GRWNT LV T AL QQF K DD YD R N Q PL WRCM P DFVKQY 618
Cdd:COG1982 334 --------- GI SGYE V AE YL R E E y GI Q VE LAD LY NILFLLSL G D TK EDIER LV A AL KEL K RL YD K N A PL EEVL P LAFPPL 404
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 619 P ryekmglgdlcqlaheayrrhdlarittevylsem E AALR P AD AF NK mtrr E I E R V DIDALE GRI T A VLLT PYPPGIPL 698
Cdd:COG1982 405 P ----------------------------------- E LVMS P RE AF FA ---- E T E L V PLEEAV GRI A A EMVI PYPPGIPL 445
570 580
....*....|....*....|....*....
gi 738649293 699 L I PGER FNRTIVE YL QFAC E FNAS FPGFE 727
Cdd:COG1982 446 L M PGER ITEEVID YL RALE E AGGR FPGFE 474
OKR_DC_1
pfam01276 Orn/Lys/Arg decarboxylase, major domain;
151-586
2.94e-171
Orn/Lys/Arg decarboxylase, major domain;
Pssm-ID: 396025 [Multi-domain]
Cd Length: 417
Bit Score: 498.18
E-value: 2.94e-171
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 151 PP FFR AL VN Y AQD G S Y SW HCPGH S GG VA F L K S P V G QM F HQ FFGEN M LR A DVC NAVE ELG Q LLDH T G PVA E SERN AAR I F K 230
Cdd:pfam01276 1 PP LYK AL FK Y VRR G N Y TF HCPGH Q GG AG F Q K H P A G RF F YD FFGEN L LR I DVC IEDV ELG D LLDH E G AIK E AQKY AAR V F G 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 231 AD HC YFV T NGTS T SNK I V WHGTVAE GD IVVV DRNCHKSI L HA ITMT GA I PV F L R P T RN HL GIIG P IPL S EF EPASIAAK I 310
Cdd:pfam01276 81 AD KS YFV V NGTS G SNK T V GMAVCTP GD TILI DRNCHKSI H HA LMLS GA T PV Y L E P S RN AY GIIG G IPL H EF QEETLKEA I 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 311 A AN P F A realn K K PR ILTL T QG TYDG I LYN VEM I KEK L GSTI D NLH FD E AW LPHAS F HDF Y EN - MHAI GEN R prp QE P L I 389
Cdd:pfam01276 161 A EV P D A ----- K G PR LAVI T NP TYDG V LYN AKE I VDT L HHLS D PIL FD S AW VGYEQ F IPI Y AD a SPMG GEN E --- NG P G I 232
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 390 F A T H S T HKLLA G LSQAS Q I VVQ E S et RQLDRNI FNEAF L MH TS TSP Q Y A I I AS C DVAA Q M M E PPG G TA L VE E SIRESMD F 469
Cdd:pfam01276 233 F V T Q S V HKLLA A LSQAS Y I HKK E G -- HIVNHDR FNEAF M MH AT TSP S Y P I F AS L DVAA K M L E GNS G RR L WN E CVERAIE F 310
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 470 R R A MRKVA sdygk DEWW F KV W G P PR lvhdd IGEQ E D W LLE P DDE WHGF ANISEGFTM LDP I K A TI I TPG LEIS GE FG E R G 549
Cdd:pfam01276 311 R K A IDTLN ----- NCEF F RP W N P EI ----- VDGK E C W PFH P GET WHGF EGYADNQYF LDP C K L TI L TPG MDED GE YS E F G 380
410 420 430
....*....|....*....|....*....|....*..
gi 738649293 550 I PA GL V S K Y L A E H GIV V EKT G L YSFFIM FT I G ITKGR 586
Cdd:pfam01276 381 V PA TI V A K W L R E N GIV P EKT D L NNILFL FT P G EDRTK 417
Orn_deC_like
cd00615 Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent ...
152-475
1.59e-108
Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Pssm-ID: 99739 [Multi-domain]
Cd Length: 294
Bit Score: 332.29
E-value: 1.59e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 152 P F F R AL VN YA QD G SY S W H C PGH S GG VA F L KS pvgqm F HQ F F GEN MLR ADV CN a VEE L GQ LLD H TGP VA E SERN AAR I F K A 231
Cdd:cd00615 1 P L F E AL KE YA KR G II S F H V PGH K GG RG F R KS ----- F YE F Y GEN LFK ADV TE - LTG L DD LLD P TGP IK E AQEL AAR A F G A 74
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 232 D H CY F VT NGTS T SNK I V WHGTVAE GD IVVV DRNCHKS ILHAITMT GA I PV F L R P T RN - HL GI I G P IP LSE F EP A S I A aki 310
Cdd:cd00615 75 K H TF F LV NGTS S SNK A V ILAVCGP GD KILI DRNCHKS VINGLVLS GA V PV Y L K P E RN p YY GI A G G IP PET F KK A L I E --- 151
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 311 aanpfareal NKKPRILTL T QG TY D GI L YN VEM I K E KLGSTIDNLHF DEA WLP H AS FH DFYE nmhaigen RPRPQEPLIF 390
Cdd:cd00615 152 ---------- HPDAKAAVI T NP TY Y GI C YN LRK I V E EAHHRGLPVLV DEA HGA H FR FH PILP -------- SSAAMAGADI 213
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 391 ATH STHK L L AG L S Q A S Q I V V QES etr QLDRNIF NEA FLM H T STSP Q Y A I I AS C DVA AQ MM EPP G GT a LVEE S I RESMDF R 470
Cdd:cd00615 214 VVQ STHK T L PA L T Q G S M I H V KGD --- LVNPDRV NEA LNL H Q STSP S Y L I L AS L DVA RA MM ALE G KE - LVEE L I ELALYA R 289
....*
gi 738649293 471 RAMR K 475
Cdd:cd00615 290 QEIN K 294
Name
Accession
Description
Interval
E-value
PRK15399
PRK15399 lysine decarboxylase;
24-750
0e+00
lysine decarboxylase;
Pssm-ID: 185297 [Multi-domain]
Cd Length: 713
Bit Score: 628.69
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 24 I RA L AD A IEEA G MEVLPVTSYG DL TS F VQQQS R ASAF I LSI D DEEF D sdspee VA S A I R QL rgfiaelrfr N DEI P I Y LH 103
Cdd:PRK15399 19 I KE L ES A LQAQ G FQTIWPQNSV DL LK F IEHNP R ICGV I FDW D EYSL D ------ LC S D I N QL ---------- N EYL P L Y AF 82
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 104 GE T rtse H LPN D I - LRELHGFIHM FE --- DTP E FV A RH I IHEAKK YLD TLA PPF FR AL VN Y AQD G S Y SWHC PGH S GG V A F 179
Cdd:PRK15399 83 IN T ---- H STM D V s VQDMRMALWF FE yal GAA E DI A IR I RQYTNE YLD NIT PPF TK AL FT Y VKE G K Y TFCT PGH M GG T A Y 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 180 L KSPVG QM F HQ FFG E N M L R ADV CNA V E ELG Q LLDHTGP VA E S E RNA AR I F K A DHC Y F VTNGTSTSNKIV WHGTVAE G DIV 259
Cdd:PRK15399 159 Q KSPVG CL F YD FFG G N T L K ADV SIS V T ELG S LLDHTGP HL E A E EYI AR T F G A EQS Y I VTNGTSTSNKIV GMYAAPA G STL 238
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 260 VV DRNCHKS IL H AIT M TGAI P VF L R PTRN H LGI I G P IP LS EF EPA SI AA K I AA NPF A realn KK P RILTL T QG TYDG I LY 339
Cdd:PRK15399 239 LI DRNCHKS LA H LLM M SDVV P IW L K PTRN A LGI L G G IP RR EF TRD SI EE K V AA TTQ A ----- QW P VHAVI T NS TYDG L LY 313
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 340 N VEM IK EK L gs TIDNL HFD E AW L P HAS FH DF Y ENMHAI - GE NR P rpq EPL IF A T H STHK L LA GL SQAS Q I VVQE setr QL 418
Cdd:PRK15399 314 N TDW IK QT L -- DVPSI HFD S AW V P YTH FH PI Y QGKSGM s GE RV P --- GKV IF E T Q STHK M LA AF SQAS L I HIKG ---- EY 384
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 419 D RNI FNEAF L MHTSTSP Q Y A I I AS CDV AA Q M MEPPG G TA L VEE S IRESMD FR RAMRKVASD yg K D E W W F KV W G P prlvh D 498
Cdd:PRK15399 385 D EET FNEAF M MHTSTSP S Y P I V AS VET AA A M LRGNP G KR L INR S VERALH FR KEVQRLREE -- S D G W F F DI W Q P ----- E 457
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 499 DIG E Q E D W LLE P DDE WHGF ANISEGFTM LDP I K A TI I TPG LEIS G EFG E R GIPA G LV S K Y L A E H GIVVEKTG L Y SFFIM F 578
Cdd:PRK15399 458 NVD E A E C W PVA P GEQ WHGF KDADADHMF LDP V K V TI L TPG MDEQ G NMS E E GIPA A LV A K F L D E R GIVVEKTG P Y NLLFL F 537
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 579 T IGI T K GRWNT L VTA L QQ FK DD YD R N QPLWRCM PD FVKQY P R - Y EK M GLG DL C Q LA H EAY R R HDL ARITTEVY -- L S EM E 655
Cdd:PRK15399 538 S IGI D K TKAMG L LRG L TE FK RA YD L N LRVKNML PD LYAED P D f Y RN M RIQ DL A Q GI H KLI R K HDL PGLMLRAF dv L P EM I 617
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 656 aa LR P AD A FNKMTRR E I E R V DIDA L E GR IT A VLLT PYPPG I PLL I PGE RF --- N R TIVEY L QFA C EFNASF PGFET IV HG 732
Cdd:PRK15399 618 -- MT P HQ A WQRQIKG E V E T V ALEQ L V GR VS A NMIL PYPPG V PLL M PGE MI tee S R AVLDF L LML C SIGQHY PGFET DI HG 695
730
....*....|....*...
gi 738649293 733 L sm EQG EDG sv R Y Y V DC L 750
Cdd:PRK15399 696 A -- KRD EDG -- V Y R V RV L 709
PRK15029
PRK15029 arginine decarboxylase; Provisional
7-750
0e+00
arginine decarboxylase; Provisional
Pssm-ID: 184989 [Multi-domain]
Cd Length: 755
Bit Score: 622.64
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 7 IV I IDED F R - S D SAS G FGIRA LADA IEEAGME V LPV TS YG D LTSFVQQQSRASAFIL S --- IDDE E FDS dspeevasa I R 82
Cdd:PRK15029 3 VL I VESE F L h Q D TWV G NAVER LADA LSQQNVT V IKS TS FD D GFAILSSNEAIDCLMF S yqm EHPD E HQN --------- V R 73
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 83 QL rgf I AE L RF R NDEI P IY L H G ET - RTSEHLPN D I L RELHG F IHMF EDT PE F V A RHIIHEAKK Y LDT L A PP F F R AL VN Y A 161
Cdd:PRK15029 74 QL --- I GK L HE R QQNV P VF L L G DR e KALAAMDR D L L ELVDE F AWIL EDT AD F I A GRAVAAMTR Y RQQ L L PP L F S AL MK Y S 150
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 162 QDGS YSW HC PGH S GGV A F L K S P V G QMF H QFF GEN ML R A D VCNAVEE LG Q LLDHTG PVA ESE RN AAR I F K AD HCYF V TN GT 241
Cdd:PRK15029 151 DIHE YSW AA PGH Q GGV G F T K T P A G RFY H DYY GEN LF R T D MGIERTS LG S LLDHTG AFG ESE KY AAR V F G AD RSWS V VV GT 230
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 242 S T SN KIVWHGTVAEG D I VVVDRNCHKSI LHAITM TGA I PV FLR P T RN HL GIIGPI PLS E FE P ASIAA KI AAN P FAREALN 321
Cdd:PRK15029 231 S G SN RTIMQACMTDN D V VVVDRNCHKSI EQGLIL TGA K PV YMV P S RN RY GIIGPI YPQ E MQ P ETLQK KI SES P LTKDKAG 310
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 322 K KP RILTL T QG TYDG IL YN VEMIKEK L GS T I D N LHFDEAW LPH A S F HDF Y ENMH A IGENRPRPQE P LI FATHSTHKLL AG 401
Cdd:PRK15029 311 Q KP SYCVV T NC TYDG VC YN AKEAQDL L EK T S D R LHFDEAW YGY A R F NPI Y ADHY A MRGEPGDHNG P TV FATHSTHKLL NA 390
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 402 LSQAS Q I V V Q E SE t RQLDRNI FN E A FL MH TS TSP Q YAI I AS C DVA AQ MM EPPG G TA L VE E S I R E SM DFR R AM RKVASDYG 481
Cdd:PRK15029 391 LSQAS Y I H V R E GR - GAINFSR FN Q A YM MH AT TSP L YAI C AS N DVA VS MM DGNS G LS L TQ E V I D E AV DFR Q AM ARLYKEFT 469
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 482 - KDE W W FK V W GPPRLVHDDI G --------------- E Q ED W LLE P DDE WHGF ANISEGFT MLDPIK AT I IT PG LEIS GE F 545
Cdd:PRK15029 470 a DGS W F FK P W NKEVVTDPQT G ktydfadaptklltt V Q DC W VMH P GES WHGF KDLPDNWS MLDPIK VS I LA PG MGED GE L 549
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 546 G E R G I PA G LV SKY L AE HGIV VEK T GLYSFFIM F TI G I T K G R W N TLV TA L QQ FK DD YD R N Q PL WRC MP DF V K QYP R - Y EK M 624
Cdd:PRK15029 550 E E T G V PA A LV TAW L GR HGIV PTR T TDFQIMFL F SM G V T R G K W G TLV NT L CS FK RH YD A N T PL AQV MP EL V E QYP D t Y AN M 629
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 625 G LG DL CQLAHEAYRRHDLARITT E V Y LSEME A ALR P AD A F N KMTRREI E R V D I DA L E GRI T A VLLT PYPPGIP L L IP GE R 704
Cdd:PRK15029 630 G IH DL GDTMFAWLKENNPGARLN E A Y SGLPV A EIT P RE A Y N AIVDNNV E L V S I EN L P GRI A A NSVI PYPPGIP M L LS GE N 709
730 740 750 760
....*....|....*....|....*....|....*....|....*....
gi 738649293 705 F --- N RTI V E YL QFACEFNAS FPGFE TIVH G LSMEQ G E dgsvr Y Y V D C L 750
Cdd:PRK15029 710 F gdk N SPQ V S YL RSLQSWDHH FPGFE HETE G TEIID G I ----- Y H V M C V 753
PRK15400
PRK15400 lysine decarboxylase;
24-750
0e+00
lysine decarboxylase;
Pssm-ID: 185298 [Multi-domain]
Cd Length: 714
Bit Score: 563.32
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 24 IR A L AD A I E EAGMEVLPVTSYG DL TSFVQQQS R ASAF I lsiddee FD S D SPE - E VASA I RQL rgfiaelrfr N DEI P I Y L 102
Cdd:PRK15400 19 IR E L HR A L E RLNFQIVYPNDRD DL LKLIENNA R LCGV I ------- FD W D KYN l E LCEE I SKM ---------- N ENL P L Y A 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 103 HGE T RTSE hlpn D I - L RE L HGFIHM FE --- DTPEFV A RH I IHEAKK Y L DT LA PP FFR AL VN Y AQD G S Y SWHC PGH S GG V A 178
Cdd:PRK15400 82 FAN T YSTL ---- D V s L ND L RLQVSF FE yal GAADDI A NK I KQTTDE Y I DT IL PP LTK AL FK Y VRE G K Y TFCT PGH M GG T A 157
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 179 F L KSPVG QM F HQ FFG E N MLRA D VCNA V E ELG Q LLDH T GP VA E S E RNA AR I F K AD HC Y F VTNGTST S NKIV WHGTVAE G DI 258
Cdd:PRK15400 158 F Q KSPVG SL F YD FFG P N TMKS D ISIS V S ELG S LLDH S GP HK E A E EYI AR V F N AD RS Y M VTNGTST A NKIV GMYSAPA G ST 237
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 259 V VV DRNCHKS IL H AIT M TGAI P VFL RPTRN HL GI I G P IP L SEF EP A S IA AKIAAN P F A realn KK P RILTL T QG TYDG I L 338
Cdd:PRK15400 238 V LI DRNCHKS LT H LMM M SDVT P IYF RPTRN AY GI L G G IP Q SEF QH A T IA KRVKET P N A ----- TW P VHAVI T NS TYDG L L 312
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 339 YN VEM IK EK L gs TIDNL HFD E AW L P HAS F HDF YE NM ha I G ENRP R PQEPL I FA T H STHKLLA GL SQAS Q I V V QE setr QL 418
Cdd:PRK15400 313 YN TDF IK KT L -- DVKSI HFD S AW V P YTN F SPI YE GK -- C G MSGG R VEGKV I YE T Q STHKLLA AF SQAS M I H V KG ---- DV 384
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 419 DRNI FNEA FL MHT S TSP Q Y A I I AS CDV AA Q MM EPPG G TA L VEE SI RESMD FR RAMRKVASD yg K D E W W F K VW G P prlvh D 498
Cdd:PRK15400 385 NEET FNEA YM MHT T TSP H Y G I V AS TET AA A MM KGNA G KR L ING SI ERAIK FR KEIKRLRTE -- S D G W F F D VW Q P ----- D 457
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 499 D I GEQ E D W L L EP D DE WHGF A NI SEGFTM LDPIK A T II TPG LEIS G EFGER GIPA GL V S KYL A EHGIVVEKTG L Y SFFIM F 578
Cdd:PRK15400 458 H I DTT E C W P L RS D ST WHGF K NI DNEHMY LDPIK V T LL TPG MKKD G TMSDF GIPA SI V A KYL D EHGIVVEKTG P Y NLLFL F 537
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 579 T IGI T K GRWNT L VT AL QQ FK DDY D R N QPLWRCM P DFVKQY P R - YE K M GLGD L C Q LA H EAYRR H D L ARITTEVYLSEMEAA 657
Cdd:PRK15400 538 S IGI D K TKALS L LR AL TD FK RAF D L N LRVKNML P SLYRED P E f YE N M RIQE L A Q NI H KLIVH H N L PDLMYRAFEVLPTMV 617
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 658 LR P AD AF N K MTRREI E R V DI D ALE GR IT A VLLT PYPPG I PL LI PGE RF --- N R TIV E Y LQ FA CE FN A SF PGFET IV HG L s 734
Cdd:PRK15400 618 MT P YA AF Q K ELHGMT E E V YL D EMV GR VN A NMIL PYPPG V PL VM PGE MI tee S R PVL E F LQ ML CE IG A HY PGFET DI HG A - 696
730
....*....|....*.
gi 738649293 735 m EQGE DG sv RY Y V DC L 750
Cdd:PRK15400 697 - YRQA DG -- RY T V KV L 709
LdcC
COG1982 Arginine/lysine/ornithine decarboxylase [Amino acid transport and metabolism];
145-727
0e+00
Arginine/lysine/ornithine decarboxylase [Amino acid transport and metabolism];
Pssm-ID: 441585 [Multi-domain]
Cd Length: 486
Bit Score: 541.24
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 145 Y L D T L AP P F F R AL VN YA QD G SY S W H C PGH S GG VA F lkspv G QM F HQ FFGEN ML R A D VCN a VEE L GQ L L D HT G PVA E SERN 224
Cdd:COG1982 1 Y M D Q L LT P L F D AL KK YA ER G PV S F H V PGH K GG RG F ----- G RE F YD FFGEN VF R L D LTE - LPG L DD L H D PE G VIK E AQEL 74
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 225 AA RI F K AD HCY F VT NGTS TS NK IVWHGTVAE GD I V V V D RNCHKS IL H AITMT GAIPV F L R P T - R N H LGIIG P I PLSEF E P 303
Cdd:COG1982 75 AA EA F G AD RTF F LV NGTS SG NK AMILAVCGP GD K V L V P RNCHKS VI H GLILS GAIPV Y L N P E i D N E LGIIG G I TPEAV E E 154
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 304 A siaak IAAN P F A REA L nkkprilt L T QG TY D G IL Y NVEM I K E KLGSTIDNLHF DEA WLP H AS FH DFY enmhaigenrpr 383
Cdd:COG1982 155 A ----- LIEH P D A KAV L -------- I T NP TY Y G VC Y DLKA I A E LAHEHGIPVLV DEA HGA H FG FH PDL ------------ 209
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 384 P QEPL ---- IFATH STHK L L AG L S Q A S QIV V QESE trq L D RNIF NEA FLMHT STSP Q Y AII AS C DVA AQM M EPP g G TA L V 459
Cdd:COG1982 210 P RSAM eaga DLVVQ STHK T L GA L T Q S S MLH V KGGR --- V D HERV NEA LMLLQ STSP S Y LLM AS L DVA RRQ M AGE - G EE L L 285
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 460 E E SIRESMDF R RAMR K V asdygkde WWFK V W GP prlvh D D I G E qedwllepddewhgfanis E G FTM LDP I K A TI IT PGL 539
Cdd:COG1982 286 D E ALELAIEA R KEIN K I -------- PGLY V F GP ----- E D L G A ------------------- P G VYD LDP T K L TI DV PGL 333
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 540 eisgefger GI PAGL V SK YL A E H - GI V VE KTG LY SFFIMFTI G I TK GRWNT LV T AL QQF K DD YD R N Q PL WRCM P DFVKQY 618
Cdd:COG1982 334 --------- GI SGYE V AE YL R E E y GI Q VE LAD LY NILFLLSL G D TK EDIER LV A AL KEL K RL YD K N A PL EEVL P LAFPPL 404
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 619 P ryekmglgdlcqlaheayrrhdlarittevylsem E AALR P AD AF NK mtrr E I E R V DIDALE GRI T A VLLT PYPPGIPL 698
Cdd:COG1982 405 P ----------------------------------- E LVMS P RE AF FA ---- E T E L V PLEEAV GRI A A EMVI PYPPGIPL 445
570 580
....*....|....*....|....*....
gi 738649293 699 L I PGER FNRTIVE YL QFAC E FNAS FPGFE 727
Cdd:COG1982 446 L M PGER ITEEVID YL RALE E AGGR FPGFE 474
OKR_DC_1
pfam01276 Orn/Lys/Arg decarboxylase, major domain;
151-586
2.94e-171
Orn/Lys/Arg decarboxylase, major domain;
Pssm-ID: 396025 [Multi-domain]
Cd Length: 417
Bit Score: 498.18
E-value: 2.94e-171
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 151 PP FFR AL VN Y AQD G S Y SW HCPGH S GG VA F L K S P V G QM F HQ FFGEN M LR A DVC NAVE ELG Q LLDH T G PVA E SERN AAR I F K 230
Cdd:pfam01276 1 PP LYK AL FK Y VRR G N Y TF HCPGH Q GG AG F Q K H P A G RF F YD FFGEN L LR I DVC IEDV ELG D LLDH E G AIK E AQKY AAR V F G 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 231 AD HC YFV T NGTS T SNK I V WHGTVAE GD IVVV DRNCHKSI L HA ITMT GA I PV F L R P T RN HL GIIG P IPL S EF EPASIAAK I 310
Cdd:pfam01276 81 AD KS YFV V NGTS G SNK T V GMAVCTP GD TILI DRNCHKSI H HA LMLS GA T PV Y L E P S RN AY GIIG G IPL H EF QEETLKEA I 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 311 A AN P F A realn K K PR ILTL T QG TYDG I LYN VEM I KEK L GSTI D NLH FD E AW LPHAS F HDF Y EN - MHAI GEN R prp QE P L I 389
Cdd:pfam01276 161 A EV P D A ----- K G PR LAVI T NP TYDG V LYN AKE I VDT L HHLS D PIL FD S AW VGYEQ F IPI Y AD a SPMG GEN E --- NG P G I 232
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 390 F A T H S T HKLLA G LSQAS Q I VVQ E S et RQLDRNI FNEAF L MH TS TSP Q Y A I I AS C DVAA Q M M E PPG G TA L VE E SIRESMD F 469
Cdd:pfam01276 233 F V T Q S V HKLLA A LSQAS Y I HKK E G -- HIVNHDR FNEAF M MH AT TSP S Y P I F AS L DVAA K M L E GNS G RR L WN E CVERAIE F 310
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 470 R R A MRKVA sdygk DEWW F KV W G P PR lvhdd IGEQ E D W LLE P DDE WHGF ANISEGFTM LDP I K A TI I TPG LEIS GE FG E R G 549
Cdd:pfam01276 311 R K A IDTLN ----- NCEF F RP W N P EI ----- VDGK E C W PFH P GET WHGF EGYADNQYF LDP C K L TI L TPG MDED GE YS E F G 380
410 420 430
....*....|....*....|....*....|....*..
gi 738649293 550 I PA GL V S K Y L A E H GIV V EKT G L YSFFIM FT I G ITKGR 586
Cdd:pfam01276 381 V PA TI V A K W L R E N GIV P EKT D L NNILFL FT P G EDRTK 417
PRK13578
PRK13578 ornithine decarboxylase; Provisional
61-746
7.94e-137
ornithine decarboxylase; Provisional
Pssm-ID: 237434 [Multi-domain]
Cd Length: 720
Bit Score: 420.53
E-value: 7.94e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 61 ILSI D DEE F d S D SPEE V A S AIRQLR G FI A ELRFRNDE IP IYL hg E T RTS E HL P NDI L RELH G FIHMF E DTP EF VA R HIIH 140
Cdd:PRK13578 22 VVAL D QTD F - T D VAAV V L S VADSRS G IL A LIKRTGFG IP VFV -- A T EEE E EV P AEV L PRIS G VFELC E SNN EF YG R QLET 98
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 141 E A K KY LDT L A PPFF RA L VN Y AQD G SYSWH CPGH S GG VA F L K S P V G QM F HQ FFGEN ML RAD V CNA VEE LG Q LL D H T G PVAE 220
Cdd:PRK13578 99 A A S KY EEN L L PPFF DT L TD Y VEM G NSTFD CPGH Q GG QF F R K H P A G RQ F YD FFGEN LF RAD M CNA DVK LG D LL I H E G AAKD 178
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 221 SERN AA RI F K AD HC YFV T NGTS T SNK I V WHGTVAE GD I V VV DRN C HKS IL H - A ITMT GA I PV F L RPT RN HL G I IG P I PLS 299
Cdd:PRK13578 179 AQKH AA KV F N AD KT YFV L NGTS A SNK V V TNALLTP GD L V LF DRN N HKS NH H g A LIQA GA T PV Y L ETA RN PF G F IG G I DAH 258
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 300 E F EPASIAAK I AANPFA R e A LNKK P RI L TLT Q - GTYDG IL YN VEMIKE K L G STI D NLH FD E AW LPHAS F ---- H D FYENM 374
Cdd:PRK13578 259 C F DEEYLREQ I REVAPE R - A DEAR P FR L AVI Q l GTYDG TI YN ARQVVD K I G HLC D YIL FD S AW VGYEQ F ipmm A D CSPLL 337
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 375 HAIG EN rprpq E P L IF A T H S T HK LL AG L SQ A SQI VVQESETRQLD R NI ---- F N E AF LM H T STSP Q Y AII A SC DV A A Q M M 450
Cdd:PRK13578 338 LELN EN ----- D P G IF V T Q S V HK QQ AG F SQ T SQI HKKDNHIKGQA R YC phkr L N N AF ML H A STSP F Y PLF A AL DV N A K M H 412
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 451 E PPG G TA L VE E SIRESMDF R RAMRKVAS dygkdew WFKVWG PP ---- RLVH D DIG EQ ----- EDWLL EP DDE WHGF ANIS 521
Cdd:PRK13578 413 E GES G RR L WM E CVKLGIEA R KLILARCK ------- LIRPFI PP vvdg KPWQ D YPT EQ iasdl RFFSF EP GEK WHGF EGYA 485
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 522 E GFTML DP I K ATII TPG LEI - S GE FGER GIPA GLVSK YL A E H GIV V EK TG L Y S FFIMF T IGITKGRWNT LV TA L QQ F KDD 600
Cdd:PRK13578 486 E DQYFV DP C K LLLT TPG IDA e T GE YEDF GIPA TILAN YL R E N GIV P EK CD L N S ILFLL T PAEDMAKLQQ LV AM L AR F EKH 565
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 601 YDRNQ PL WRCM P DFV K QY P - RY EKMG L GD LCQ LA H EA Y RR HD LARITT E VYLSEM -- EAALR P A DA FNKMT R R E I E R V DI 677
Cdd:PRK13578 566 IEDDA PL AEVL P SVY K KN P e RY RGYT L RQ LCQ EM H DL Y VS HD VKQLQK E MFRKAS fp RVVMN P Q DA NIAYI R G E V E L V RL 645
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 738649293 678 DAL EGRI T A VLLT PYPPG IPLLI PGE RFNRTIVE Y LQFAC E FNASF PGF ETIVH G LSM E QGE DG SV R Y Y 746
Cdd:PRK13578 646 SEA EGRI A A EGAL PYPPG VLCVV PGE IWGGAVQR Y FLALE E GINLL PGF APELQ G VYL E TDA DG RK R A Y 714
Orn_deC_like
cd00615 Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent ...
152-475
1.59e-108
Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Pssm-ID: 99739 [Multi-domain]
Cd Length: 294
Bit Score: 332.29
E-value: 1.59e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 152 P F F R AL VN YA QD G SY S W H C PGH S GG VA F L KS pvgqm F HQ F F GEN MLR ADV CN a VEE L GQ LLD H TGP VA E SERN AAR I F K A 231
Cdd:cd00615 1 P L F E AL KE YA KR G II S F H V PGH K GG RG F R KS ----- F YE F Y GEN LFK ADV TE - LTG L DD LLD P TGP IK E AQEL AAR A F G A 74
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 232 D H CY F VT NGTS T SNK I V WHGTVAE GD IVVV DRNCHKS ILHAITMT GA I PV F L R P T RN - HL GI I G P IP LSE F EP A S I A aki 310
Cdd:cd00615 75 K H TF F LV NGTS S SNK A V ILAVCGP GD KILI DRNCHKS VINGLVLS GA V PV Y L K P E RN p YY GI A G G IP PET F KK A L I E --- 151
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 311 aanpfareal NKKPRILTL T QG TY D GI L YN VEM I K E KLGSTIDNLHF DEA WLP H AS FH DFYE nmhaigen RPRPQEPLIF 390
Cdd:cd00615 152 ---------- HPDAKAAVI T NP TY Y GI C YN LRK I V E EAHHRGLPVLV DEA HGA H FR FH PILP -------- SSAAMAGADI 213
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 391 ATH STHK L L AG L S Q A S Q I V V QES etr QLDRNIF NEA FLM H T STSP Q Y A I I AS C DVA AQ MM EPP G GT a LVEE S I RESMDF R 470
Cdd:cd00615 214 VVQ STHK T L PA L T Q G S M I H V KGD --- LVNPDRV NEA LNL H Q STSP S Y L I L AS L DVA RA MM ALE G KE - LVEE L I ELALYA R 289
....*
gi 738649293 471 RAMR K 475
Cdd:cd00615 290 QEIN K 294
OKR_DC_1_C
pfam03711 Orn/Lys/Arg decarboxylase, C-terminal domain;
611-737
3.75e-61
Orn/Lys/Arg decarboxylase, C-terminal domain;
Pssm-ID: 461020 [Multi-domain]
Cd Length: 132
Bit Score: 201.60
E-value: 3.75e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 611 M P DF V KQ YP - RYE K MGL G DLCQ LA H EA YR RHDL AR ITT E VYL S EM E A A LR PA D A FNKMT R R E I E R V DI D A LEGRI T AV LL 689
Cdd:pfam03711 1 L P EL V AA YP e RYE G MGL R DLCQ EM H DF YR ENNV AR LQK E AFR S LP E P A MT PA E A YQELV R G E V E L V PL D E LEGRI A AV GV 80
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 738649293 690 T PYPPGIPLL I PGERF --- NR T I VE YL QFAC EF NAS FPGFET IV HG LSM E Q 737
Cdd:pfam03711 81 L PYPPGIPLL M PGERF gee NR P I LD YL LALE EF DNR FPGFET EI HG VYR E E 131
OKR_DC_1_N
pfam03709 Orn/Lys/Arg decarboxylase, N-terminal domain; This domain has a flavodoxin-like fold, and is ...
19-145
4.93e-37
Orn/Lys/Arg decarboxylase, N-terminal domain; This domain has a flavodoxin-like fold, and is termed the "wing" domain because of its position in the overall 3D structure.
Pssm-ID: 427454 [Multi-domain]
Cd Length: 111
Bit Score: 134.29
E-value: 4.93e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 19 ASGFGI R A LA D A I E EA G M EV LPV TS YG DL TSFVQQQSRAS A FI LS I DD E efdsdspeevasairq LR G FIA E L R F RN DEI 98
Cdd:pfam03709 1 LKIAAS R E LA E A L E RT G R EV VDA TS TD DL LAAIETFTDIA A VV LS W DD Y ---------------- AA G LLD E I R R RN FDL 64
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 738649293 99 P IY L H GET R TSE HL P N D I LR ELH GFI HMF EDTPEF V AR H I IHE AKKY 145
Cdd:pfam03709 65 P VF L L GET H TSE DV P A D V LR LID GFI ELA EDTPEF I AR Q I EAA AKKY 111
AAT_I
cd01494 Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP) ...
217-410
2.35e-07
Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), and D-amino acid superfamily (fold type IV) and Glycogen phophorylase family (fold type V).
Pssm-ID: 99742 [Multi-domain]
Cd Length: 170
Bit Score: 51.23
E-value: 2.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 217 PVA E S E RNA AR IFK -- A D HCY FV TN GT S t S N KIVWHGTVAE GD I V V VD R N C H K S IL - H A ITMT GA I PV FLRPTRNHL G II 293
Cdd:cd01494 1 KLE E L E EKL AR LLQ pg N D KAV FV PS GT G - A N EAALLALLGP GD E V I VD A N G H G S RY w V A AELA GA K PV PVPVDDAGY G GL 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738649293 294 GPIP L S E FEPASIA A K I aanpfarealnkkpr IL T LTQGT y D G I L YNVEM I KEKLGSTIDN L HF D E A wlp H A SFH d FYEN 373
Cdd:cd01494 80 DVAI L E E LKAKPNV A L I --------------- VI T PNTTS - G G V L VPLKE I RKIAKEYGIL L LV D A A --- S A GGA - SPAP 139
170 180 190
....*....|....*....|....*....|....*..
gi 738649293 374 MHA I G E nrprpq EPLIFA T H S T HK L L A G l SQASQIV V 410
Cdd:cd01494 140 GVL I P E ------ GGADVV T F S L HK N L G G - EGGGVVI V 169
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
