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Conserved domains on  [gi|739095827|ref|WP_036966643|]
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MULTISPECIES: TonB-dependent receptor domain-containing protein [Pseudoalteromonas]

Protein Classification

TonB-dependent receptor family protein( domain architecture ID 11469151)

TonB-dependent receptor family protein such as Escherichia coli Fe(3+) dicitrate transport protein FecA which is the outer membrane receptor protein in the Fe(3+) dicitrate transport system

PubMed:  12948487
TCDB:  1.B.14

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
FecA COG4772
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
8-716 0e+00

Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];


:

Pssm-ID: 443804 [Multi-domain]  Cd Length: 681  Bit Score: 589.21  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827   8 STLSTAIALSLSANAFAKDVTKEEknfeqITVIGSASA---INDIPGSATFISEQDLEKFEYTDISRVLSAVPGVYVQEE 84
Cdd:COG4772    2 RRALAAALLLAAAAAAEAATTLET-----VVVTGSRAAearLKDVPGSVSVVDREELENQAATSLREVLRRVPGVNVQEE 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  85 DGYGLRPNIGMRGTGTGRNDKISVMEDGVLVAPAPYSAPSAYYFPTMGRMESIEVLKGAASVKYGPRTTGGVLNLVSRSL 164
Cdd:COG4772   77 DGFGLRPNIGIRGLGPRRSRGITLLEDGIPIAPAPYGDPAAYYFPDLERMERIEVLRGAAALRYGPQTVGGAINFVTRTI 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 165 PTEGSkGLLNAELGSDGFYKGHAYFGKKKNNAAGLVEVFTYGADGFKelpvgsDNSGFEKNDFLLKFGFDFGDNeaHSLE 244
Cdd:COG4772  157 PTAFG-GELRVTGGSFGYRRTHASVGGTVGNFGYLVEYSRKRGDGFR------DNSGFDINDFNAKLGYRLSDR--QELT 227
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 245 MKVKYSDERSDeTYMGLTDADYQENPYRRYAasQNDEMNTQHNAYQVNYAYRFGKGYELLATAYLNDFHRNWYkaskvss 324
Cdd:COG4772  228 LKFQYYDEDAN-TPGGLTDAQFDADPRQSYR--PADQFDTRRTQLSLRYEHQLSDNTTLTTTAYYNDFSRNWY------- 297
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 325 syleqyseFEANPTSEGIEGVAVKANNRDYQAKGLQT----EFHIPAGNHYITVGARYHEDEMDRFQWQDKYTLNQDlsm 400
Cdd:COG4772  298 --------IRQNTADPNTPGLGLRGNPRGYRSYGIEPrlthRFELGGVPHTLEVGLRYHREEEDRKQYVNTYGQGRS--- 366
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 401 tltekgVPGSDSNRVDSAEATTLFIQDEWSL-DALVISAGLRYEDITIKREEWAKSDptraNGLTKNISNDTEILVPSLG 479
Cdd:COG4772  367 ------GAGLRRDRRFSADALAAYAQNRFELtGRLTLTPGLRYEHIRRDRTDRYSTR----TGGDDSGSNSYSEFLPGLG 436
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 480 ATYTVSDSLTLLAGIQKGYAP--------AAPGNADQEEEESVNIELGGRYDY-AGFNGEVIYFNSDYTNMHGNCTAAVG 550
Cdd:COG4772  437 LLYQLTDNLQLYANVSRGFEPptfgdlayGNGGNPDLKPEKSWNYELGTRGRIgNGLSAEVALFYIDYDNELGSCSAAGG 516
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 551 cndnNIGDQYNYGEVSVSGFEVSAGKVFATDTA-SFPVRLTYTYTNSEFENDFesdlwGSVKSGDAMPYVPENQLALSFG 629
Cdd:COG4772  517 ----DRSTFTNAGETRHQGLELALDYDLLKGGGlGLPLFAAYTYTDAEFTSDF-----GPVFAGNRLPYVPRHQLTAGLG 587
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 630 AEFSSFVFDTQMRYVSDAHADLSTSGRNA----IDSRVVWDLAAKYLIDDKQKVYLTVDNLFDKTYVANRANG---GIQP 702
Cdd:COG4772  588 YEHGGWTANLNGRYVSEQFTDAANTVADGsfgkIPSYTVLDLSASYDFGKNLSLFAGVNNLFDKRYIASRAPNyaaGIRP 667
                        730
                 ....*....|....
gi 739095827 703 GKPRTLQVGYSYSF 716
Cdd:COG4772  668 GPPRTVYAGLRLKF 681
 
Name Accession Description Interval E-value
FecA COG4772
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
8-716 0e+00

Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];


Pssm-ID: 443804 [Multi-domain]  Cd Length: 681  Bit Score: 589.21  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827   8 STLSTAIALSLSANAFAKDVTKEEknfeqITVIGSASA---INDIPGSATFISEQDLEKFEYTDISRVLSAVPGVYVQEE 84
Cdd:COG4772    2 RRALAAALLLAAAAAAEAATTLET-----VVVTGSRAAearLKDVPGSVSVVDREELENQAATSLREVLRRVPGVNVQEE 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  85 DGYGLRPNIGMRGTGTGRNDKISVMEDGVLVAPAPYSAPSAYYFPTMGRMESIEVLKGAASVKYGPRTTGGVLNLVSRSL 164
Cdd:COG4772   77 DGFGLRPNIGIRGLGPRRSRGITLLEDGIPIAPAPYGDPAAYYFPDLERMERIEVLRGAAALRYGPQTVGGAINFVTRTI 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 165 PTEGSkGLLNAELGSDGFYKGHAYFGKKKNNAAGLVEVFTYGADGFKelpvgsDNSGFEKNDFLLKFGFDFGDNeaHSLE 244
Cdd:COG4772  157 PTAFG-GELRVTGGSFGYRRTHASVGGTVGNFGYLVEYSRKRGDGFR------DNSGFDINDFNAKLGYRLSDR--QELT 227
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 245 MKVKYSDERSDeTYMGLTDADYQENPYRRYAasQNDEMNTQHNAYQVNYAYRFGKGYELLATAYLNDFHRNWYkaskvss 324
Cdd:COG4772  228 LKFQYYDEDAN-TPGGLTDAQFDADPRQSYR--PADQFDTRRTQLSLRYEHQLSDNTTLTTTAYYNDFSRNWY------- 297
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 325 syleqyseFEANPTSEGIEGVAVKANNRDYQAKGLQT----EFHIPAGNHYITVGARYHEDEMDRFQWQDKYTLNQDlsm 400
Cdd:COG4772  298 --------IRQNTADPNTPGLGLRGNPRGYRSYGIEPrlthRFELGGVPHTLEVGLRYHREEEDRKQYVNTYGQGRS--- 366
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 401 tltekgVPGSDSNRVDSAEATTLFIQDEWSL-DALVISAGLRYEDITIKREEWAKSDptraNGLTKNISNDTEILVPSLG 479
Cdd:COG4772  367 ------GAGLRRDRRFSADALAAYAQNRFELtGRLTLTPGLRYEHIRRDRTDRYSTR----TGGDDSGSNSYSEFLPGLG 436
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 480 ATYTVSDSLTLLAGIQKGYAP--------AAPGNADQEEEESVNIELGGRYDY-AGFNGEVIYFNSDYTNMHGNCTAAVG 550
Cdd:COG4772  437 LLYQLTDNLQLYANVSRGFEPptfgdlayGNGGNPDLKPEKSWNYELGTRGRIgNGLSAEVALFYIDYDNELGSCSAAGG 516
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 551 cndnNIGDQYNYGEVSVSGFEVSAGKVFATDTA-SFPVRLTYTYTNSEFENDFesdlwGSVKSGDAMPYVPENQLALSFG 629
Cdd:COG4772  517 ----DRSTFTNAGETRHQGLELALDYDLLKGGGlGLPLFAAYTYTDAEFTSDF-----GPVFAGNRLPYVPRHQLTAGLG 587
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 630 AEFSSFVFDTQMRYVSDAHADLSTSGRNA----IDSRVVWDLAAKYLIDDKQKVYLTVDNLFDKTYVANRANG---GIQP 702
Cdd:COG4772  588 YEHGGWTANLNGRYVSEQFTDAANTVADGsfgkIPSYTVLDLSASYDFGKNLSLFAGVNNLFDKRYIASRAPNyaaGIRP 667
                        730
                 ....*....|....
gi 739095827 703 GKPRTLQVGYSYSF 716
Cdd:COG4772  668 GPPRTVYAGLRLKF 681
ligand_gated_channel cd01347
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...
56-716 1.08e-51

TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.


Pssm-ID: 238657 [Multi-domain]  Cd Length: 635  Bit Score: 189.97  E-value: 1.08e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  56 ISEQDLEKFEYTDISRVLSAVPGVYVQEeDGYGLRPNIGMRGTGTGRNDkisVMEDGVLVAPAPYSAPSAYYFPTMGRME 135
Cdd:cd01347    5 ITAEDIEKQPATSLADLLRRIPGVSVTR-GGGGGGSTISIRGFGPDRTL---VLVDGLPLASSNYGRGVDLNTIPPELIE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 136 SIEVLKGAASVKYGPRTTGGVLNLVSRSlPTEGSKGLLNAELGSDGFYkghAYFGKKKNNAAGL-----VEVFTYGA--- 207
Cdd:cd01347   81 RVEVLKGPSSALYGSGAIGGVVNIITKR-PTDEFGGSVTAGYGSDNSG---SSGGGGFDVSGALaddgaFGARLYGAyrd 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 208 -DGFKELPVGSDNSGFEKNDFLLKFGFDFgdNEAHSLEMKVKYSDERSDETYMGL----TDADYQENPYRRYAASQNDem 282
Cdd:cd01347  157 gDGTIDGDGQADDSDEERYNVAGKLDWRP--DDDTRLTLDAGYQDQDADGPGGTLpangTGSSLGGGPSSNTNGDRDW-- 232
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 283 ntqhnAYQVNYAYRFGKGYE-----LLATAYLNDFHRNwykaSKVSSSYLEQYSEFEANPTSEGIEGVAVKANNRDYQAK 357
Cdd:cd01347  233 -----DYRDRYRKRASLGLEhdlndTGWTLRANLSYSY----TDNDGDPLILNGGNNAAGGDLGRSGYSSERDTTQLGFD 303
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 358 G-LQTEFHIPAGNHYITVGARYhedemdrfqwqDKYTLNQDLsmtltekgvpgsdsnrvdsaeaTTLFIQDEWSL-DALV 435
Cdd:cd01347  304 AgLNAPFGTGPVAHTLTLGVEY-----------RREELDEKQ----------------------TALYAQDTIELtDDLT 350
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 436 ISAGLRYEDITIKREEWAKSDPTRANGLTKNIsndteilvPSLGATYTVSDSLTLLAGIQKGYAP--------------- 500
Cdd:cd01347  351 LTLGLRYDHYDQDSKDTIAGGTTAKKSYSHWS--------PSLGLVYKLTDGLSLYASYSQGFRApslgelygggshggt 422
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 501 AAPGNADQEEEESVNIELGGRYDYA-GFNGEVIYFNSDYTNmhgNCTAAVGCNDNNIGDQY-NYGEVSVSGFEVSAGKVF 578
Cdd:cd01347  423 AAVGNPNLKPEKSKQYELGLKYDPGdGLTLSAALFRIDIKN---EIVSTPTNTGLGLVTVYvNGGKARIRGVELEASYDL 499
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 579 atdTASFPVRLTYTYTNSEFENDFESDlwgsvkSGDAMPYVPENQLALSFGAEFSS--FVFDTQMRYVSDAHADLSTSGR 656
Cdd:cd01347  500 ---TDGLGLTGSYTYTDTEVKRTDGAT------TGNRLPGIPKHTANLGLDYELPDegLTAGGGVRYRGKQYADTANGNN 570
                        650       660       670       680       690       700
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 739095827 657 NA-IDSRVVWDLAAKYLIDDKQKVYLTVDNLFDKTYVA----NRANGGIQPGKPRTLQVGYSYSF 716
Cdd:cd01347  571 TVkVPGYTLVDLSASYQFTKNLTLRLGVNNLFDKDYYTslsvRGSGLYGYYGPGRTYYLSVSYKF 635
TonB-siderophor TIGR01783
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ...
48-716 1.55e-48

TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273805 [Multi-domain]  Cd Length: 651  Bit Score: 181.46  E-value: 1.55e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827   48 DIPGSATFISEQDLEKFEYTDISRVLSAVPGVYVQEEDGYGLRPNIGMRGTGtGRNDKISVMEDGVlvapaPYSAPSAYY 127
Cdd:TIGR01783   1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTQFGNITIRGFG-LEVDIDNVYLDGV-----PLLSRGNLA 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  128 FPTMGRMESIEVLKGAASVKYGPRTTGGVLNLVSRSlPTEGSKGLLNAELGSDGFYKGHAYFGK---KKNNAAGLVEVFT 204
Cdd:TIGR01783  75 IVDPAMVERVEVLRGPASLLYGGSAPGGVINIVTKR-PQDEPKGSVTFGAGTRSGYRTAFDLGGplgADGTFRGRLNGAR 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  205 YGADGFKelpvgsDNSGFEKNDFLLKFGFDFGDNEAHSLEmkVKYSDERSDETYMGLTDADYQENPYRRYAASQNDEMNT 284
Cdd:TIGR01783 154 QDGDSFY------DGAGEETRLGATATDWQLDDRTLLRLG--AYYQKERDRGGYGGLPASGGTSGRDLSSDRYLGTSSNR 225
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  285 QHNAYQvNYAYRFGKGYellataylnDFHRNWYKASKVSSSYLEQYSEF-EANPTSEGIEGVAVKANNRDYQAK------ 357
Cdd:TIGR01783 226 NYDDRE-YLSYGLSLEY---------QFNDVWTGKQNLRYSYFDTDSNQvQASGYSSDGGLFGRSLTVVNVKQDrvqida 295
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  358 GLQTEFHIPAGNHYITVGARYHEDEMDRFQWQDKYTLNQDLsmtLTEKGVPGSDSNRVDSAEATT--------LFIQDEW 429
Cdd:TIGR01783 296 GLDGEFETGPIEHDLLLGVSYGQRTTNRFNNTGYPSDNIYS---LTATSSARTDIGDSPKDRALSsttkalngVALQRIL 372
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  430 SLDALVISAGLRYEDITIKREEwaksdptRANGLTKNISNDTeiLVPSLGATYTVSDSLTLLAGIQKGYAP--AAPGNAD 507
Cdd:TIGR01783 373 LADKWTLTLGGRYDSVDVKSNN-------GVAGSTGKRDDSQ--FTPSLGVAYKPTDDWSLYASYAESFKPggYYPKGAG 443
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  508 Q-----EEEESVNIELGGRYDYAG-FNGEVIYFNSDYtNMHGNCTAAVGCNDNNIGDQYNYgevsvsGFEVSagkvfATD 581
Cdd:TIGR01783 444 NsgdilEPEKGKNYELGVRYDLGDsLLATAALFRITK-DNQLVQDPVNGTFSVNAGKTRNR------GVELE-----ARG 511
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  582 TASFPVRLT--YTYTNSEFENDFESDLwgsvkSGDAMPYVPENQlaLSFGAEFSSFVFDTQM------RYVSDAHADLST 653
Cdd:TIGR01783 512 YLTPGLSLSagYTYTDAEFTEDTNGDT-----QGNTVPFVPKHT--ASLWASYAPPVGDNGLtlgggvQYTGKAYVDGGN 584
                         650       660       670       680       690       700
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 739095827  654 SGRnaIDSRVVWDLAAKYLIDDKQKVYLT--VDNLFDKTYVA----NRANGGIQPGKPRTLQVGYSYSF 716
Cdd:TIGR01783 585 TGK--VPSYTVVDLSVRYDLTKKKNLTLAlnVNNLFDRDYYTsgyrWGPSAYIYPGAPRTVGLSVSYDF 651
TonB_dep_Rec pfam00593
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
233-715 1.43e-33

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.


Pssm-ID: 395474 [Multi-domain]  Cd Length: 475  Bit Score: 134.90  E-value: 1.43e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  233 FDFGDNEAHSLEMKVKYSDERSDETYMGLTDADYQENPY--RRYAASQNDEMNTQHNAYQVNYAYRFGKGYELLATAYLN 310
Cdd:pfam00593   5 SLDLLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYlgDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLSTLRLG 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  311 DFHRNWYKASKVSSSYLEQYSEFeanptsegiegvavKANNRDYQAKGLQTEFHIPAG-NHYITVGARYHEDEMDrfqwq 389
Cdd:pfam00593  85 LRYSSLDGDYTSNSSGLSGAGDY--------------LSDDRLYGLYGLDGDLELSLDlSHDLLLGVELRTAGLD----- 145
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  390 dkYTLNQDLSMTLTEKGVPGSDSNRVDSAEATTLFIQDEWSL-DALVISAGLRYEditikreeWAKSDPTRANGLTKNIS 468
Cdd:pfam00593 146 --YRRLDDDAYDPYDPANPSSSSYSDTTTDSYGLYLQDNIKLtDRLTLTLGLRYD--------HYSTDGDDGNGGGDNFS 215
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  469 NDTEILVPSLGATYTVSDSLTLLAGIQKGY-APA----------------APGNADQEEEESVNIELGGRYDYAGFNGEV 531
Cdd:pfam00593 216 RSYSAFSPRLGLVYKPTDNLSLYASYSRGFrAPSlgelygsgsgggggavAGGNPDLKPETSDNYELGLKYDDGRLSLSL 295
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  532 IYFNSDYTNMHGNcTAAVGCNDNNIGDQYNYGEVSVSGFEVSAGKVFATDTASFpvrLTYTYTNSEFENDFESDlwgsvk 611
Cdd:pfam00593 296 ALFYIDIKNLITS-DPDGPGLGGTVYTYTNVGKARIRGVELELSGRLWGLGLSG---GGYTYTDADDDADADDT------ 365
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  612 sGDAMPYVPENQ--LALSFGAEFSSFVFDTQMRYVSDA-HADLSTSGRNAIDSRVVWDLAAKYLIDDKQKVYLTVDNLFD 688
Cdd:pfam00593 366 -GNPLPNVPRHTanLGLTYDFPLGGWGARLGARYVGSGeRRYGDAANTFKTPGYTLVDLSAGYRLNKNLTLRLGVNNLFD 444
                         490       500       510
                  ....*....|....*....|....*....|.
gi 739095827  689 KTY----VANRANGGIQPGKPRTLQVGYSYS 715
Cdd:pfam00593 445 KYYkryySSGGGNLGGYPGPGRTFYLGLSYK 475
PRK13483 PRK13483
ligand-gated channel protein;
9-716 2.31e-25

ligand-gated channel protein;


Pssm-ID: 184080 [Multi-domain]  Cd Length: 660  Bit Score: 111.79  E-value: 2.31e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827   9 TLSTAIALSLSANAFAKDVTKEEKNFEQITVIGSASAINDIPGSATFISEQDLEKFEYTDISRVLSAVPGVYVQeedGYG 88
Cdd:PRK13483  10 SALCLLPAVFVTHALAQAAPDKTMETVVVTASGYEQQIRDAPASISVITREDLENRFYRDLTDALLDVPGVVVT---GGG 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  89 LRPNIGMRGTGtgrNDKISVMEDGVLVAP---APYSAPSAY---YFPTMGRMESIEVLKGAASVKYGPRTTGGVLNLVSR 162
Cdd:PRK13483  87 DRTDISLRGMG---SQYTLILVDGKRQSSretRPNSDGPGVeqaWTPPLAAIERIEVIRGPMSSLYGSDAIGGVINIITR 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 163 SLPTEGSKGL-LNAEL----GSDGFYKGHAYF-GKKKNNAAGLVevfTYGADGFKElpvgSDN--SGFEKNDFL-LKFGF 233
Cdd:PRK13483 164 KVPNEWQGEVrLDTTLqensDSGNVYQANFFVnGPLIKDLLGLQ---LYGQYTQRE----EDDieGGYRDKDARsLTAKL 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 234 DFGDNEAHSLEMKVKYSDERSDETyMGLT---DADYQENPYRRYAASQNDEMNTQHNAYQVNYAYRFGkgyellatayln 310
Cdd:PRK13483 237 ALTPNEDHDIMLEVGTSNQERDST-VGKTvapLAPGESCGRRGCPESSTTEYERSTVSLSHTGRWDFG------------ 303
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 311 dfhrnwykaskVSSSYLeQYSEFEaNPTSEgiegvaVKANNRDYqakglQTEFHIPAG-NHYITVGARYHEDEMDRFqwq 389
Cdd:PRK13483 304 -----------TSDTYI-QHEEFD-NKSRE------MKIKNTDF-----QSSLVAPLGqEHTLTFGAAYNHQDLTDE--- 356
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 390 dkyTLNQdlsmtltekgvpGSDSNRVdSAEATTLFIQDEWSL-DALVISAGLRYEDITIKREEWAksdptrangltknis 468
Cdd:PRK13483 357 ---TSNQ------------ISDLTDI-SRTQWAVFSEDEWRIaDDFALTGGLRLDHDENFGGHVS--------------- 405
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 469 ndteilvPSLGATYTVSDSLTLLAGIQKGY-APA----AP------------GNADQEEEESVNIELGGRYDY-AGFNGE 530
Cdd:PRK13483 406 -------PRVYGVWNLAPSWTVKGGVSTGFrAPSlrqtTPdwgqvsrggniyGNPDLKPETSLNKELGLYYDLgSGLTAS 478
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 531 VIYFNSDYTN--MHGNCTAAVgCND--NNIGD----QYNYGEVSVSGFEVSAGKVFATDtasfpVRLT--YTYTNSEfen 600
Cdd:PRK13483 479 LTVFYNEFKDkiTRVACPATQ-CTDgpNQFGAdpttYVNIDEAVTQGVEASLSYPITST-----LSLSgnYTYTDSE--- 549
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 601 dfesdlwgsVKSGD--AMPY--VPENQLALSF----GAEFSSFvfdTQMRYVSDAHADLSTSGRNAI--DSRVVWDLAAK 670
Cdd:PRK13483 550 ---------QKSGAykGSPLnqLPKHLFQASLnwepTDRLNSW---ARVNYRGEESQPTTGPSSSSFiaPSYTFLDLGAN 617
                        730       740       750       760
                 ....*....|....*....|....*....|....*....|....*.
gi 739095827 671 YLIDDKQKVYLTVDNLFDKTyVANRANGGIQPGkpRTLQVGYSYSF 716
Cdd:PRK13483 618 YQLTDNLKLSAGIYNLFDKE-INYEEYGYVEDG--RRYWLGMTYSF 660
 
Name Accession Description Interval E-value
FecA COG4772
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
8-716 0e+00

Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];


Pssm-ID: 443804 [Multi-domain]  Cd Length: 681  Bit Score: 589.21  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827   8 STLSTAIALSLSANAFAKDVTKEEknfeqITVIGSASA---INDIPGSATFISEQDLEKFEYTDISRVLSAVPGVYVQEE 84
Cdd:COG4772    2 RRALAAALLLAAAAAAEAATTLET-----VVVTGSRAAearLKDVPGSVSVVDREELENQAATSLREVLRRVPGVNVQEE 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  85 DGYGLRPNIGMRGTGTGRNDKISVMEDGVLVAPAPYSAPSAYYFPTMGRMESIEVLKGAASVKYGPRTTGGVLNLVSRSL 164
Cdd:COG4772   77 DGFGLRPNIGIRGLGPRRSRGITLLEDGIPIAPAPYGDPAAYYFPDLERMERIEVLRGAAALRYGPQTVGGAINFVTRTI 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 165 PTEGSkGLLNAELGSDGFYKGHAYFGKKKNNAAGLVEVFTYGADGFKelpvgsDNSGFEKNDFLLKFGFDFGDNeaHSLE 244
Cdd:COG4772  157 PTAFG-GELRVTGGSFGYRRTHASVGGTVGNFGYLVEYSRKRGDGFR------DNSGFDINDFNAKLGYRLSDR--QELT 227
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 245 MKVKYSDERSDeTYMGLTDADYQENPYRRYAasQNDEMNTQHNAYQVNYAYRFGKGYELLATAYLNDFHRNWYkaskvss 324
Cdd:COG4772  228 LKFQYYDEDAN-TPGGLTDAQFDADPRQSYR--PADQFDTRRTQLSLRYEHQLSDNTTLTTTAYYNDFSRNWY------- 297
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 325 syleqyseFEANPTSEGIEGVAVKANNRDYQAKGLQT----EFHIPAGNHYITVGARYHEDEMDRFQWQDKYTLNQDlsm 400
Cdd:COG4772  298 --------IRQNTADPNTPGLGLRGNPRGYRSYGIEPrlthRFELGGVPHTLEVGLRYHREEEDRKQYVNTYGQGRS--- 366
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 401 tltekgVPGSDSNRVDSAEATTLFIQDEWSL-DALVISAGLRYEDITIKREEWAKSDptraNGLTKNISNDTEILVPSLG 479
Cdd:COG4772  367 ------GAGLRRDRRFSADALAAYAQNRFELtGRLTLTPGLRYEHIRRDRTDRYSTR----TGGDDSGSNSYSEFLPGLG 436
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 480 ATYTVSDSLTLLAGIQKGYAP--------AAPGNADQEEEESVNIELGGRYDY-AGFNGEVIYFNSDYTNMHGNCTAAVG 550
Cdd:COG4772  437 LLYQLTDNLQLYANVSRGFEPptfgdlayGNGGNPDLKPEKSWNYELGTRGRIgNGLSAEVALFYIDYDNELGSCSAAGG 516
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 551 cndnNIGDQYNYGEVSVSGFEVSAGKVFATDTA-SFPVRLTYTYTNSEFENDFesdlwGSVKSGDAMPYVPENQLALSFG 629
Cdd:COG4772  517 ----DRSTFTNAGETRHQGLELALDYDLLKGGGlGLPLFAAYTYTDAEFTSDF-----GPVFAGNRLPYVPRHQLTAGLG 587
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 630 AEFSSFVFDTQMRYVSDAHADLSTSGRNA----IDSRVVWDLAAKYLIDDKQKVYLTVDNLFDKTYVANRANG---GIQP 702
Cdd:COG4772  588 YEHGGWTANLNGRYVSEQFTDAANTVADGsfgkIPSYTVLDLSASYDFGKNLSLFAGVNNLFDKRYIASRAPNyaaGIRP 667
                        730
                 ....*....|....
gi 739095827 703 GKPRTLQVGYSYSF 716
Cdd:COG4772  668 GPPRTVYAGLRLKF 681
CirA COG1629
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
35-694 7.21e-75

Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];


Pssm-ID: 441236 [Multi-domain]  Cd Length: 644  Bit Score: 254.37  E-value: 7.21e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  35 EQITVIGS--ASAINDIPGSATFISEQDLEKFEYTDISRVLSAVPGVYVQEEDGYGLRPNIgmRGTGTGRNDkISVMEDG 112
Cdd:COG1629    2 EEVVVTATrtDESLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVSVTSAGGGAGQISI--RGFGGGGNR-VLVLVDG 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 113 VLVAPAPYSAPSAYYFPTMgRMESIEVLKGAASVKYGPRTTGGVLNLVSRSlPTEGSKGLLNAELGSDGFYKGHAYFGKK 192
Cdd:COG1629   79 VPLNDPSGGDGGLSYIDPE-DIERVEVLRGPSSALYGSGALGGVINIVTKK-PKDGKGGEVSASYGSYGTYRASLSLSGG 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 193 KNNAAGLVEVFTYGADGFKelpvgsDNSGFEKNDFLLKFGFDFGDNeaHSLEMKVKYSDERSDET-YMGLTDADYQENPY 271
Cdd:COG1629  157 NGKLAYRLSASYRDSDGYR------DNSDSDRYNLRAKLGYQLGDD--TRLTLSASYSDSDQDSPgYLTLAALRPRGAMD 228
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 272 RRYAASQNDEMNTQHNAYQVNYAYR-FGKGYELLATAYLNDFHRNWYKASKVSSSYLEQYSEFEANPTSEGIEGVAVKan 350
Cdd:COG1629  229 DGTNPYSNDTDDNTRDRYSLSLEYEhLGDGLKLSASAYYRYDDTDLDSDFTPTPADGGTLEQTDFDNRTYGLELRLTY-- 306
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 351 nrdyqakglqteFHIPAGNHYITVGARYhedemdrfQWQDKYTLNQDLSMTLTEKGVPGSDSNRVDSAEATTLFIQDEWS 430
Cdd:COG1629  307 ------------DLGFGGKHTLLVGLDY--------QRQDLDGSGYPLDLGSGSLPTLTSGADDDGTTTSLALYAQDTYK 366
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 431 L-DALVISAGLRYEDITIKREEWAKSDPTRANGLTKNisndteILVPSLGATYTVSDSLTLLAGIQKGY----------- 498
Cdd:COG1629  367 LtDKLTLTAGLRYDYVSYDVDDTVTGTDSASGSRSYS------AFSPSLGLTYQLSPNLSLYASYSRGFraptfgelyan 440
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 499 --APAAPGNADQEEEESVNIELGGRYDYAG--FNGEVIYFNSDYTNMHgncTAAVGCNDNNIGDQY-NYGEVSVSGFEVS 573
Cdd:COG1629  441 gtDPYSVGNPDLKPETSTNYELGLRYRLLDgrLSLSLALFYSDVDNEI---LSVPLPNDSGFSTYYtNAGKARSYGVELE 517
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 574 AGKVFatdTASFPVRLTYTYTNSEFENDFESDLwgsVKSGDAMPYVPENQLALSFGAEFSS-FVFDTQMRYVSDAHADLS 652
Cdd:COG1629  518 LSYQL---TPGLSLNASYSYTDAKFDDDTDGSA---DLDGNRLPGVPPLTANLGLTYEFPGgWSLGLGVRYVGDRYLDDA 591
                        650       660       670       680
                 ....*....|....*....|....*....|....*....|..
gi 739095827 653 TSGRnAIDSRVVWDLAAKYLIDDKQKVYLTVDNLFDKTYVAN 694
Cdd:COG1629  592 NTQG-APGGYTLVDLGAGYRFGDNLTLSLGVDNLFDKKYATS 632
FepA COG4771
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ...
9-680 2.48e-63

Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];


Pssm-ID: 443803 [Multi-domain]  Cd Length: 612  Bit Score: 222.04  E-value: 2.48e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827   9 TLSTAIALSLSANAFAKDVTKEE-KNFEQITVIGSASA--INDIPGSATFISEQDLEKFEYTDISRVLSAVPGVYVQEED 85
Cdd:COG4771    1 LLLASLLLLLALAAQAADALAEDaTELEEVVVTATRTEqsLSDAPASVSVITAEEIEKLGATDLADALRLLPGVSVTRSG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  86 GYGLRPNIGMRGTGTGRNdkiSVMEDGVLVAPAPYSAPSAYYFPTMGRMESIEVLKGAASVKYGPRTTGGVLNLVSRSlP 165
Cdd:COG4771   81 GRGGSSGISIRGLGGDRV---LVLIDGVPVNNPALGGGGDLSYIPPDDIERIEVIRGPASALYGSDAIGGVINIITKK-P 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 166 TEGSKGLLNAELGS--DGFYKGHAYFGKKKNNAAGLVEVFTYGADGFKELPVG--SDNSGFEKNDFLLKFGFDFGDNeaH 241
Cdd:COG4771  157 TDELEGSVSLGYGSngNGTYSGSLSLGGPGDKLSFLLSGSYRDRDGYLDYRNGgfVGNSGYERYNLNAKLGYRLSDN--H 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 242 SLEMKVKYSDERSDETYMGLTDADYQENPYRryaasqNDEMNTQHNAYQVNYAYRFGKGYELLATaylndfhrnwykask 321
Cdd:COG4771  235 RLSLSGGYSRQDRDGGPPTLGDTEISSDNAG------DRDTTTDRGNYSLRYNGDLGDNLDLSLY--------------- 293
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 322 vsssyleqYSEFEANPTSEGIEGVAVKANNRDYQAKGLQTEFHIP-AGNHYITVGARYHEDEMDRFQWQDKYTLNQDLsm 400
Cdd:COG4771  294 --------YSRTDRDSTNGSLGGSTGSFSDSDDTTYGLELDLTYPlGGNHTLTLGAEYRYDDLDSSSFLGGADASRDT-- 363
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 401 tltekgvpgsdsnrvdsaeaTTLFIQDEWSL-DALVISAGLRYEDITIkreewakSDPTRANGLTknisndteilvPSLG 479
Cdd:COG4771  364 --------------------YGLFAQDEWKLtDKLTLTAGLRYDYYST-------FGASNYTAFS-----------PRLG 405
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 480 ATYTVSDSLTLLAGIQKGY-AP---------------AAPGNADQEEEESVNIELGGRYDY--AGFNGEVIYFNSDYTNM 541
Cdd:COG4771  406 LRYDLSDNLTLRASYGRGFrAPslaelygsgtgtpgrYVLGNPDLKPETSDNYELGLEYRLgnGGLSLSLTGFYTDIKDL 485
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 542 HGncTAAVGCNDNNIGDQYNYGEVSVSGFEVSAGKVFatdTASFPVRLTYTYTNSEFENDfesdlwgsvKSGDAMPYVPE 621
Cdd:COG4771  486 IV--LVPVGPGPGDVLQYENVGKARTYGLELELKYRL---GKGLTLTASYTYLDSKIDDG---------DTGEPLPNVPP 551
                        650       660       670       680       690       700
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 739095827 622 NQLALSFGAEFSSFVFDTQMRYVSDAHADLSTSGRNA--IDSRVVWDLAAKYLIDDKQKVY 680
Cdd:COG4771  552 HKANLGLDYRLPKWWLLLLLTRYYGGRYVTPPSGRLEgyTPGYTLLDLRASYKLTKNLTLS 612
Fiu COG4774
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
45-716 6.83e-57

Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];


Pssm-ID: 443806 [Multi-domain]  Cd Length: 639  Bit Score: 204.73  E-value: 6.83e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  45 AINDIPGSATFISEQDLEKFEYTDISRVLSAVPGVYVQE-EDGYGLRPNIgmRGTGTGrndkISVMEDGVLVAPAPYSAP 123
Cdd:COG4774    5 PLLDTPQSVTVVTRELIEDQGATSLADALRNVPGVTFGAgEGGNGDSFSI--RGFSAS----GDIYVDGLRDPGQYRRDT 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 124 SAYyfptmgrmESIEVLKGAASVKYGPRTTGGVLNLVSRSlPTEGSKGLLNAELGSDGFYKGHAYFGKK-KNNAAGLVEV 202
Cdd:COG4774   79 FNL--------ERVEVLKGPASVLYGRGSPGGVINLVTKR-PTDEPFTEVTLTYGSDGQRRATLDVNGPlGDDLAYRLNG 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 203 FTYGADGFkelpvgSDNSgfEKNDFLLKFGFDFGDNEAHSLEMKVKYSDERsDETYMGL---TDADYQENPYRRYAASQN 279
Cdd:COG4774  150 MYRDSDSY------RDGV--DNDRWGIAPSLTWRLGDRTRLTLDYEYQDDD-RTPDYGVpavANGRPVDVDRSTFYGQPD 220
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 280 DEMNTQHNAYQVNYAYRFGKGYELLATAYLNDFHRNWykaskvsssyleQYSEFEANPTSeGIEGVAVKANNRDYQAKGL 359
Cdd:COG4774  221 DYSDSETDSATLRLEHDFNDNWTLRNALRYSDYDRDY------------RNTYPTGGNAT-GTVTRSAYRRDQDNDTLSN 287
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 360 QTE----FHIPAGNHYITVGARYHEDEMDRFQWQDKYTL-NQDL---SMTLTEKGVPGSDSNRVDSAEATTLFIQDEWSL 431
Cdd:COG4774  288 QTDltgkFDTGGVKHTLLAGVEYSREDSDNARYSGGGTApTVNLynpVYGAPVTGPTLGGADNDSRTDTTGLYLQDTISL 367
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 432 -DALVISAGLRYEDITIKREewaksdpTRANGLTKNISNDTEILvPSLGATYTVSDSLTLLAGIQKGYAP------AAPG 504
Cdd:COG4774  368 tDRWSLLAGLRYDRFDTDYT-------DRTTGATTSSYDDSAFS-PRAGLVYKPTPNLSLYASYSTSFNPgggapsLSNA 439
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 505 NADQEEEESVNIELGGRYDYAG--FNGEVIYFNSDYTNmhgnctaAVGCNDNNIGDQYNYGEVSVSGFEVSA-GKVfatd 581
Cdd:COG4774  440 GQALDPEKSRQYEVGVKWDLLDgrLSLTAALFRIEKTN-------VRTTDPANPGVYVQTGEQRSRGVELEAtGEL---- 508
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 582 TASFPVRLTYTYTNSEFENDFESDLwgsvkSGDAMPYVPENQlaLSFGAE----FSSFVFDTQMRYVSDAHADLSTSGRn 657
Cdd:COG4774  509 TPGWSVLAGYTYLDAEITKSANAAN-----VGNRLPNVPRHS--ASLWTTydlpLPGLTLGGGVRYVGSRYADAANTVK- 580
                        650       660       670       680       690       700
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 658 aIDSRVVWDLAAKYLIDDKQKVYLTVDNLFDKTYVAN-RANGGIQPGKPRTLQVGYSYSF 716
Cdd:COG4774  581 -LPSYTRFDAGASYRLNKNLTLRLNVNNLTDKRYYASaYGSGYVTPGAPRTVLLSASYRF 639
ligand_gated_channel cd01347
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...
56-716 1.08e-51

TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.


Pssm-ID: 238657 [Multi-domain]  Cd Length: 635  Bit Score: 189.97  E-value: 1.08e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  56 ISEQDLEKFEYTDISRVLSAVPGVYVQEeDGYGLRPNIGMRGTGTGRNDkisVMEDGVLVAPAPYSAPSAYYFPTMGRME 135
Cdd:cd01347    5 ITAEDIEKQPATSLADLLRRIPGVSVTR-GGGGGGSTISIRGFGPDRTL---VLVDGLPLASSNYGRGVDLNTIPPELIE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 136 SIEVLKGAASVKYGPRTTGGVLNLVSRSlPTEGSKGLLNAELGSDGFYkghAYFGKKKNNAAGL-----VEVFTYGA--- 207
Cdd:cd01347   81 RVEVLKGPSSALYGSGAIGGVVNIITKR-PTDEFGGSVTAGYGSDNSG---SSGGGGFDVSGALaddgaFGARLYGAyrd 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 208 -DGFKELPVGSDNSGFEKNDFLLKFGFDFgdNEAHSLEMKVKYSDERSDETYMGL----TDADYQENPYRRYAASQNDem 282
Cdd:cd01347  157 gDGTIDGDGQADDSDEERYNVAGKLDWRP--DDDTRLTLDAGYQDQDADGPGGTLpangTGSSLGGGPSSNTNGDRDW-- 232
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 283 ntqhnAYQVNYAYRFGKGYE-----LLATAYLNDFHRNwykaSKVSSSYLEQYSEFEANPTSEGIEGVAVKANNRDYQAK 357
Cdd:cd01347  233 -----DYRDRYRKRASLGLEhdlndTGWTLRANLSYSY----TDNDGDPLILNGGNNAAGGDLGRSGYSSERDTTQLGFD 303
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 358 G-LQTEFHIPAGNHYITVGARYhedemdrfqwqDKYTLNQDLsmtltekgvpgsdsnrvdsaeaTTLFIQDEWSL-DALV 435
Cdd:cd01347  304 AgLNAPFGTGPVAHTLTLGVEY-----------RREELDEKQ----------------------TALYAQDTIELtDDLT 350
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 436 ISAGLRYEDITIKREEWAKSDPTRANGLTKNIsndteilvPSLGATYTVSDSLTLLAGIQKGYAP--------------- 500
Cdd:cd01347  351 LTLGLRYDHYDQDSKDTIAGGTTAKKSYSHWS--------PSLGLVYKLTDGLSLYASYSQGFRApslgelygggshggt 422
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 501 AAPGNADQEEEESVNIELGGRYDYA-GFNGEVIYFNSDYTNmhgNCTAAVGCNDNNIGDQY-NYGEVSVSGFEVSAGKVF 578
Cdd:cd01347  423 AAVGNPNLKPEKSKQYELGLKYDPGdGLTLSAALFRIDIKN---EIVSTPTNTGLGLVTVYvNGGKARIRGVELEASYDL 499
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 579 atdTASFPVRLTYTYTNSEFENDFESDlwgsvkSGDAMPYVPENQLALSFGAEFSS--FVFDTQMRYVSDAHADLSTSGR 656
Cdd:cd01347  500 ---TDGLGLTGSYTYTDTEVKRTDGAT------TGNRLPGIPKHTANLGLDYELPDegLTAGGGVRYRGKQYADTANGNN 570
                        650       660       670       680       690       700
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 739095827 657 NA-IDSRVVWDLAAKYLIDDKQKVYLTVDNLFDKTYVA----NRANGGIQPGKPRTLQVGYSYSF 716
Cdd:cd01347  571 TVkVPGYTLVDLSASYQFTKNLTLRLGVNNLFDKDYYTslsvRGSGLYGYYGPGRTYYLSVSYKF 635
TonB-siderophor TIGR01783
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ...
48-716 1.55e-48

TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273805 [Multi-domain]  Cd Length: 651  Bit Score: 181.46  E-value: 1.55e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827   48 DIPGSATFISEQDLEKFEYTDISRVLSAVPGVYVQEEDGYGLRPNIGMRGTGtGRNDKISVMEDGVlvapaPYSAPSAYY 127
Cdd:TIGR01783   1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTQFGNITIRGFG-LEVDIDNVYLDGV-----PLLSRGNLA 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  128 FPTMGRMESIEVLKGAASVKYGPRTTGGVLNLVSRSlPTEGSKGLLNAELGSDGFYKGHAYFGK---KKNNAAGLVEVFT 204
Cdd:TIGR01783  75 IVDPAMVERVEVLRGPASLLYGGSAPGGVINIVTKR-PQDEPKGSVTFGAGTRSGYRTAFDLGGplgADGTFRGRLNGAR 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  205 YGADGFKelpvgsDNSGFEKNDFLLKFGFDFGDNEAHSLEmkVKYSDERSDETYMGLTDADYQENPYRRYAASQNDEMNT 284
Cdd:TIGR01783 154 QDGDSFY------DGAGEETRLGATATDWQLDDRTLLRLG--AYYQKERDRGGYGGLPASGGTSGRDLSSDRYLGTSSNR 225
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  285 QHNAYQvNYAYRFGKGYellataylnDFHRNWYKASKVSSSYLEQYSEF-EANPTSEGIEGVAVKANNRDYQAK------ 357
Cdd:TIGR01783 226 NYDDRE-YLSYGLSLEY---------QFNDVWTGKQNLRYSYFDTDSNQvQASGYSSDGGLFGRSLTVVNVKQDrvqida 295
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  358 GLQTEFHIPAGNHYITVGARYHEDEMDRFQWQDKYTLNQDLsmtLTEKGVPGSDSNRVDSAEATT--------LFIQDEW 429
Cdd:TIGR01783 296 GLDGEFETGPIEHDLLLGVSYGQRTTNRFNNTGYPSDNIYS---LTATSSARTDIGDSPKDRALSsttkalngVALQRIL 372
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  430 SLDALVISAGLRYEDITIKREEwaksdptRANGLTKNISNDTeiLVPSLGATYTVSDSLTLLAGIQKGYAP--AAPGNAD 507
Cdd:TIGR01783 373 LADKWTLTLGGRYDSVDVKSNN-------GVAGSTGKRDDSQ--FTPSLGVAYKPTDDWSLYASYAESFKPggYYPKGAG 443
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  508 Q-----EEEESVNIELGGRYDYAG-FNGEVIYFNSDYtNMHGNCTAAVGCNDNNIGDQYNYgevsvsGFEVSagkvfATD 581
Cdd:TIGR01783 444 NsgdilEPEKGKNYELGVRYDLGDsLLATAALFRITK-DNQLVQDPVNGTFSVNAGKTRNR------GVELE-----ARG 511
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  582 TASFPVRLT--YTYTNSEFENDFESDLwgsvkSGDAMPYVPENQlaLSFGAEFSSFVFDTQM------RYVSDAHADLST 653
Cdd:TIGR01783 512 YLTPGLSLSagYTYTDAEFTEDTNGDT-----QGNTVPFVPKHT--ASLWASYAPPVGDNGLtlgggvQYTGKAYVDGGN 584
                         650       660       670       680       690       700
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 739095827  654 SGRnaIDSRVVWDLAAKYLIDDKQKVYLT--VDNLFDKTYVA----NRANGGIQPGKPRTLQVGYSYSF 716
Cdd:TIGR01783 585 TGK--VPSYTVVDLSVRYDLTKKKNLTLAlnVNNLFDRDYYTsgyrWGPSAYIYPGAPRTVGLSVSYDF 651
FhuE COG4773
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ...
45-716 2.04e-47

Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];


Pssm-ID: 443805 [Multi-domain]  Cd Length: 692  Bit Score: 178.94  E-value: 2.04e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  45 AINDIPGSATFISEQDLEKFEYTDISRVLSAVPGVYVQEEDGYGlRPNIGMRGTGTGrndkiSVMEDGVLVAPAPYSAPS 124
Cdd:COG4773   61 PLRETPQSVSVVTRQLIEDQGATTLDDALRNVPGVTVSSYDGGG-RDSFSIRGFSID-----NYLRDGLPLGGFGGGQPD 134
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 125 AYYFptmgrmESIEVLKGAASVKYGPRTTGGVLNLVSRSlPTEGSKGLLNAELGSDGFYKGHA----YFGKKKNNAAGLV 200
Cdd:COG4773  135 TANL------ERVEVLKGPAGLLYGAGSPGGLVNLVTKR-PTAEPQGEVSLSAGSWDTYRATAdvggPLNEDGTLRYRLN 207
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 201 eVFTYGADGFKElpvgsdnsGFEKNDFLLKFGFDFGDNEAHSLEMKVKYSDERSDETYMGLTDADYQEN-PYRRYAASQN 279
Cdd:COG4773  208 -AAYEDGDSFRD--------GVDNRRTLIAPSLDWDLTDDTTLTLGAEYQDDDSTGDRGFLPLDGTLLDlPRSTNLGEPW 278
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 280 DEMNTQHNAYQVNYAYRFGKGYELLATAYLNDFHRNWYkaskvsSSYLeqyseFEANPTSEGIEGVAVKANNRDYQAKGL 359
Cdd:COG4773  279 DYYDTETTTLFAELEHRFNDDWSLRANARYSDSDRDGR------SAYA-----YGAPDAATGTLTRYASARDGDSRSDSL 347
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 360 QT----EFHIPAGNHYITVGARYHEDEMDRFQWQ-DKYTLNQDLSMTLTEKGVPGSDSNrvDSAEATTLFIQDEWSL-DA 433
Cdd:COG4773  348 DAnlngKFETGGLEHTLLVGADYSRYDSDSDSATaGTINIYNPVYGNLPEPDFDASDTD--TTTRQTGLYAQDQISLtDR 425
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 434 LVISAGLRYEditikreeWAKSDPTRANGLTKNISNDTEiLVPSLGATYTVSDSLTLLAGIQKGYAPAAPGNADQEE--- 510
Cdd:COG4773  426 LSLLLGGRYD--------WYETDSTNRLGGSTTSYDDSA-FTPRAGLVYDLTPGLSLYASYSESFEPQSGADNNGNPldp 496
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 511 EESVNIELGGRYDYAG--FNGEVIYFNSDYTNmhgnctaaVGCNDNNIGDQYNY-GEVSVSGFEVSA-GKVfatdTASFP 586
Cdd:COG4773  497 ETGKQYEAGVKGELFDgrLNATLAVFDITQKN--------VATTDPDNPNFYVQvGEVRSRGVELELsGEL----TPGLN 564
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 587 VRLTYTYTNSEFENDfesdlwGSVKSGDAMPYVPENQLALSF-----GAEFSSFVFDTQMRYVSDAHADLSTSGRnaIDS 661
Cdd:COG4773  565 LIAGYTYTDAKITKD------ADALEGKRLTNVPRHTASLWTtyrfpSGALKGLGLGGGVRYVGERYGDAANTFT--LPS 636
                        650       660       670       680       690
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 739095827 662 RVVWDLAAKYLIDDKQKVYLTVDNLFDKTYVANRAN-GGIQPGKPRTLQVGYSYSF 716
Cdd:COG4773  637 YTLVDAGARYDLGKNWTLQLNVNNLFDKKYYASSGSrGYVYYGAPRNVRLSLSYKF 692
TonB_dep_Rec pfam00593
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
233-715 1.43e-33

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.


Pssm-ID: 395474 [Multi-domain]  Cd Length: 475  Bit Score: 134.90  E-value: 1.43e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  233 FDFGDNEAHSLEMKVKYSDERSDETYMGLTDADYQENPY--RRYAASQNDEMNTQHNAYQVNYAYRFGKGYELLATAYLN 310
Cdd:pfam00593   5 SLDLLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYlgDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLSTLRLG 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  311 DFHRNWYKASKVSSSYLEQYSEFeanptsegiegvavKANNRDYQAKGLQTEFHIPAG-NHYITVGARYHEDEMDrfqwq 389
Cdd:pfam00593  85 LRYSSLDGDYTSNSSGLSGAGDY--------------LSDDRLYGLYGLDGDLELSLDlSHDLLLGVELRTAGLD----- 145
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  390 dkYTLNQDLSMTLTEKGVPGSDSNRVDSAEATTLFIQDEWSL-DALVISAGLRYEditikreeWAKSDPTRANGLTKNIS 468
Cdd:pfam00593 146 --YRRLDDDAYDPYDPANPSSSSYSDTTTDSYGLYLQDNIKLtDRLTLTLGLRYD--------HYSTDGDDGNGGGDNFS 215
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  469 NDTEILVPSLGATYTVSDSLTLLAGIQKGY-APA----------------APGNADQEEEESVNIELGGRYDYAGFNGEV 531
Cdd:pfam00593 216 RSYSAFSPRLGLVYKPTDNLSLYASYSRGFrAPSlgelygsgsgggggavAGGNPDLKPETSDNYELGLKYDDGRLSLSL 295
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  532 IYFNSDYTNMHGNcTAAVGCNDNNIGDQYNYGEVSVSGFEVSAGKVFATDTASFpvrLTYTYTNSEFENDFESDlwgsvk 611
Cdd:pfam00593 296 ALFYIDIKNLITS-DPDGPGLGGTVYTYTNVGKARIRGVELELSGRLWGLGLSG---GGYTYTDADDDADADDT------ 365
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  612 sGDAMPYVPENQ--LALSFGAEFSSFVFDTQMRYVSDA-HADLSTSGRNAIDSRVVWDLAAKYLIDDKQKVYLTVDNLFD 688
Cdd:pfam00593 366 -GNPLPNVPRHTanLGLTYDFPLGGWGARLGARYVGSGeRRYGDAANTFKTPGYTLVDLSAGYRLNKNLTLRLGVNNLFD 444
                         490       500       510
                  ....*....|....*....|....*....|.
gi 739095827  689 KTY----VANRANGGIQPGKPRTLQVGYSYS 715
Cdd:pfam00593 445 KYYkryySSGGGNLGGYPGPGRTFYLGLSYK 475
BtuB COG4206
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
37-296 2.60e-32

Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];


Pssm-ID: 443355 [Multi-domain]  Cd Length: 276  Bit Score: 126.53  E-value: 2.60e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  37 ITVIGS--ASAINDIPGSATFISEQDLEKFEYTDISRVLSAVPGVYVQEEDGYGLRPNIGMRGTGTGRndkISVMEDGVL 114
Cdd:COG4206    1 VVVTATrlEQSKSDLTGSVTVIDAEELERSGATSLADALRRVPGVQVSSSGGPGSAASISIRGLGSNQ---TLVLIDGVP 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 115 VAPAPYSAPSAYYFPTmGRMESIEVLKGAASVKYGPRTTGGVLNLVSRSlPTEGSKGLLNAELGSDGFYKGHAYFGKKKN 194
Cdd:COG4206   78 LNDPSLGGVDLSLIPP-DDIERIEVLKGAASALYGSDAIGGVINITTKK-GKKGFKGSVSASYGSFGTRRLSASLSGGAG 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 195 NAAGLVEVFTYGADGFKEL-PVGSDNSGFEKNDFLLKFGFDFGDNeaHSLEMKVKYSDERSDetYMGLTDADYQENPYRR 273
Cdd:COG4206  156 KFSYSLSASYRRSDGYRYNdPDLRNNDGYENTSLNARLGYKLGDN--GSLSLSGGYSDSERG--YPGAVGSDRNLRLSLS 231
                        250       260
                 ....*....|....*....|...
gi 739095827 274 YAASQNDEMNTQHNAYQVNYAYR 296
Cdd:COG4206  232 LEYKLSDGWSLLLLAYYYYDRDY 254
TonB-hemlactrns TIGR01786
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ...
35-716 1.81e-31

TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273808 [Multi-domain]  Cd Length: 715  Bit Score: 131.00  E-value: 1.81e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827   35 EQITVIGSASAIN------DIPGSATFISEQDLEKFEYTDISRVLSAVPGVYVQEEdGYGLRPNIGMRGTGTGRndkISV 108
Cdd:TIGR01786   1 DTITVTATRTADPqrrdlsVTPASVSVISREQLKSQQVRNLRDLLRYEPGVSVVEG-GRGGSQGINIRGLDKNR---VAV 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  109 MEDGVlvaPAPYS-APSAYYFPTMGRME-----SIEVLKGAASVKYGPRTTGGVLNLVSRS----LPTEGSKG-LLNAEL 177
Cdd:TIGR01786  77 LVDGI---RQNTSyGGQGSTFYAINSIDpelikSIEIVKGASSSLYGSGALGGVVAFRTKDaadlLKPGKDLGgLSKLGY 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  178 GS-DGFYKGHAYFGKKKNNAAGLVevfTYGADGFKELPVGSDN-------------SGFEKNDFLLKFGFDFgdNEAHSL 243
Cdd:TIGR01786 154 SSaNNRFTQSVAAAGRNDDVDALV---QATYRRGHELKNGNKAnigneskrskpnpSDYKSQSFLAKLGWQL--NDAHRL 228
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  244 EMKVKYSDERSDETYMgltdadyqENPYRRYAASQNDEMNTQHNAY-QVNYAYRFGKGYELLATAYLNDFHRNWYKASKV 322
Cdd:TIGR01786 229 GLSLEYTQTDYDEPEM--------TNTSYLTKPLGAPLLSSTVVLGdSKTRDRRTGLDYELNPDNSWLDTVKLALDKQYI 300
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  323 SSSYLEQYSEFEANPtseGIEGVAVKANNRDYQAKGLQTEFHI--PAGNHYITVGARYHEDEMDRFQWQDKYTLNQDLSM 400
Cdd:TIGR01786 301 QLYNYLNATSASDYP---GVDKNGRYKDKYDYYTLGFDTNNKIefSVHSLSLTYGLDRFKDKVSTGDSRRNLPTAAYNLY 377
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  401 TLTEKGVPGSDSNrvdsaeaTTLFIQDEWSL-DALVISAGLRYEDITIKREEWAKSDPTRANGLTKNISndteilvPSLG 479
Cdd:TIGR01786 378 GYEGENRPVKGSN-------FGLFLQDNIKLgDWLSLSAGLRYDHYKTDPKADESKDYGAISKTYSRWS-------PSLG 443
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  480 ATYTVSDSLTLLAGIQKGY-APAAP-----------------GNADQEEEESVNIELGGRYDYAGFNGEVIYFNSDYTNM 541
Cdd:TIGR01786 444 LTYKPTPWLTLYYSYSQGFrAPSFDelygtgahpgggpytflPNPNLKPETSKNWEIGINLHFDQLDFKVSYFRNDYKDF 523
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  542 ----HGNCTAA--VGCNDNNIGDQYNYGEVSVSGFEVSaGKVFATDTASFPVRLTYT--YTNSEFENDFESDLWGSVKSG 613
Cdd:TIGR01786 524 idlgIGVTAKGnmAQVGSNTITNYVNIDNARIRGIELS-GRYDLGSFFSGPDGWTTTlkYGYTKGKDSDTNPWLNAITPL 602
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  614 DAMP----YVPENQLALSFGAEFSSFVFDTQMRYVSDAHADLSTSGRNAIDSRVVWDLAAKYLIDDKQKVYLTVDNLFDK 689
Cdd:TIGR01786 603 KVVLglgyDHPDEKWGVGLTLTFSGAKDAVDAYATYYENGEAAKAGPLRTPSYTVVDLYGYYKPNKNLTLRFGVYNLLDR 682
                         730       740       750
                  ....*....|....*....|....*....|....*
gi 739095827  690 TY--------VANRANGGIQPGkpRTLQVGYSYSF 716
Cdd:TIGR01786 683 KYttwesarqAGPLATGYTAPG--RNYKASVEYKF 715
PRK13483 PRK13483
ligand-gated channel protein;
9-716 2.31e-25

ligand-gated channel protein;


Pssm-ID: 184080 [Multi-domain]  Cd Length: 660  Bit Score: 111.79  E-value: 2.31e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827   9 TLSTAIALSLSANAFAKDVTKEEKNFEQITVIGSASAINDIPGSATFISEQDLEKFEYTDISRVLSAVPGVYVQeedGYG 88
Cdd:PRK13483  10 SALCLLPAVFVTHALAQAAPDKTMETVVVTASGYEQQIRDAPASISVITREDLENRFYRDLTDALLDVPGVVVT---GGG 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  89 LRPNIGMRGTGtgrNDKISVMEDGVLVAP---APYSAPSAY---YFPTMGRMESIEVLKGAASVKYGPRTTGGVLNLVSR 162
Cdd:PRK13483  87 DRTDISLRGMG---SQYTLILVDGKRQSSretRPNSDGPGVeqaWTPPLAAIERIEVIRGPMSSLYGSDAIGGVINIITR 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 163 SLPTEGSKGL-LNAEL----GSDGFYKGHAYF-GKKKNNAAGLVevfTYGADGFKElpvgSDN--SGFEKNDFL-LKFGF 233
Cdd:PRK13483 164 KVPNEWQGEVrLDTTLqensDSGNVYQANFFVnGPLIKDLLGLQ---LYGQYTQRE----EDDieGGYRDKDARsLTAKL 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 234 DFGDNEAHSLEMKVKYSDERSDETyMGLT---DADYQENPYRRYAASQNDEMNTQHNAYQVNYAYRFGkgyellatayln 310
Cdd:PRK13483 237 ALTPNEDHDIMLEVGTSNQERDST-VGKTvapLAPGESCGRRGCPESSTTEYERSTVSLSHTGRWDFG------------ 303
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 311 dfhrnwykaskVSSSYLeQYSEFEaNPTSEgiegvaVKANNRDYqakglQTEFHIPAG-NHYITVGARYHEDEMDRFqwq 389
Cdd:PRK13483 304 -----------TSDTYI-QHEEFD-NKSRE------MKIKNTDF-----QSSLVAPLGqEHTLTFGAAYNHQDLTDE--- 356
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 390 dkyTLNQdlsmtltekgvpGSDSNRVdSAEATTLFIQDEWSL-DALVISAGLRYEDITIKREEWAksdptrangltknis 468
Cdd:PRK13483 357 ---TSNQ------------ISDLTDI-SRTQWAVFSEDEWRIaDDFALTGGLRLDHDENFGGHVS--------------- 405
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 469 ndteilvPSLGATYTVSDSLTLLAGIQKGY-APA----AP------------GNADQEEEESVNIELGGRYDY-AGFNGE 530
Cdd:PRK13483 406 -------PRVYGVWNLAPSWTVKGGVSTGFrAPSlrqtTPdwgqvsrggniyGNPDLKPETSLNKELGLYYDLgSGLTAS 478
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 531 VIYFNSDYTN--MHGNCTAAVgCND--NNIGD----QYNYGEVSVSGFEVSAGKVFATDtasfpVRLT--YTYTNSEfen 600
Cdd:PRK13483 479 LTVFYNEFKDkiTRVACPATQ-CTDgpNQFGAdpttYVNIDEAVTQGVEASLSYPITST-----LSLSgnYTYTDSE--- 549
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 601 dfesdlwgsVKSGD--AMPY--VPENQLALSF----GAEFSSFvfdTQMRYVSDAHADLSTSGRNAI--DSRVVWDLAAK 670
Cdd:PRK13483 550 ---------QKSGAykGSPLnqLPKHLFQASLnwepTDRLNSW---ARVNYRGEESQPTTGPSSSSFiaPSYTFLDLGAN 617
                        730       740       750       760
                 ....*....|....*....|....*....|....*....|....*.
gi 739095827 671 YLIDDKQKVYLTVDNLFDKTyVANRANGGIQPGkpRTLQVGYSYSF 716
Cdd:PRK13483 618 YQLTDNLKLSAGIYNLFDKE-INYEEYGYVEDG--RRYWLGMTYSF 660
TonB-hemin TIGR01785
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ...
34-716 1.49e-24

TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273807 [Multi-domain]  Cd Length: 665  Bit Score: 109.02  E-value: 1.49e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827   34 FEQITVIGS--ASAINDIPGSATFISEQDLEKFEYTDISRVLSAVPGVYVQeedgYGLRPN---IGMRGTGTGRndkISV 108
Cdd:TIGR01785   1 LDTVTVTATrtRQVLSEAPASVSVISGEQIESKQANNLADALNTVPGVDVT----GGGRPPgqsINIRGLQDNR---VLV 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  109 MEDGVLVAPAPYSAPSAYYFPTMGRMESIEVLKGAASVKYGPRTTGGVLNLVSRS----LPTEGSKGL---LNAELGSDG 181
Cdd:TIGR01785  74 VVDGARQNYQRGGAHNGSLFVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDaadlLRPGQLFGGlakLSYGSNNNS 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  182 FYKGHAYFGKKKNNAAGLVEVFTYGADGFKELPvGSD--NSGFEKNDFLLKFGFDFgdNEAHSLEMKVKYSDERSDETY- 258
Cdd:TIGR01785 154 FGGSVAVAGRLDDNLDALVAATYRDGGNYRNGN-KEEatNSAYVQKNLLAKLGWQL--DDAQRLEFSYFTTEGSLDEAQn 230
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  259 -MGLTDADYQENPYrRYAASQNDemntQHNAYQVNYAYRFGKGYELLATAYLND-FHRNWYKASKVSSSYLEQYSEFEAN 336
Cdd:TIGR01785 231 sGPGTEYVLGSSST-LLASSTRD----RSATLTYNWTPEDNPWLDATASLYYNRtENDNDRSARGVGREEGYQYTTYGAT 305
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  337 ptsegiegvavkANNrdyqakglQTEFHIpaGNHY-ITVGARYHEDEM--DRFqwqdkytlnqdlsmtlTEKGVPGSDSN 413
Cdd:TIGR01785 306 ------------LQN--------TSRFDV--ASWStLTYGVDWMKDKRrtESF----------------DPNSVTTIVPN 347
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  414 RVDSAEATT-LFIQDEWSL--DALVISAGLRYeditikreEWAKSDPtRANGLTKNISNDTEILVPSLGATYTVSDSLTL 490
Cdd:TIGR01785 348 PPSAKEYFFgLFLQDNIPLldDRLTLSAGLRY--------DHYKLSP-KTTADTEAVDRSYSRWSPSLGLSYKPVDWLTL 418
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  491 LAGIQKGY-APAAP------------------GNADQEEEESVNIELGGRYDYAG-------FNGEVIYFNSDYTN---M 541
Cdd:TIGR01785 419 YASYSQGFrAPSIDelygtgdhpgtpggytfaPNPNLKPETSKTWELGANLSFDNllldndqLQFKVAYFYNDVKDfidL 498
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  542 HGNCTAAVGCNDNNIGDQYNYGEVSVSGFEVSAgkvfATDTASFPVRLTYTYT---NSEfENDFESDL--WGSVKSGDAm 616
Cdd:TIGR01785 499 TIGVTDNVTAGMNNITQYVNIDGARIRGIEASA----SYDAGLWATGLSYGYTigkDQN-TNQWLSNIppLKLVVTVGY- 572
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  617 pYVPENQLALSFGAEFSsfvfdtqMRYV-SDAHADLSTSGRNAIDSRVVWDLAAKYLIDDKQKVYL--TVDNLFDKTYVa 693
Cdd:TIGR01785 573 -RFPDRRLDLGAKAAYY-------ERQSeSPTTEDVAANGLLTTPGYTVVDLYATYQPNAVKGLTVrfGVNNLTDRKYT- 643
                         730       740
                  ....*....|....*....|...
gi 739095827  694 nRANGGIQPGKPRTLQVGYSYSF 716
Cdd:TIGR01785 644 -PAQSVPGAGPGRNFKGSVKYQF 665
PRK13524 PRK13524
FepA family TonB-dependent siderophore receptor;
1-689 1.69e-22

FepA family TonB-dependent siderophore receptor;


Pssm-ID: 237410 [Multi-domain]  Cd Length: 744  Bit Score: 102.80  E-value: 1.69e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827   1 MKPTFIVSTLSTAIALSLSANAFAKDVTKEEKNF--EQITVIGSASAINDIPGSATfISEQDLEKFEYT-DISRVLSAVP 77
Cdd:PRK13524   2 NKKIHSLALLVNLGIYGVAQAAEAEDAKTDDTPAshEDTIVVTAAEQNLQAPGVST-ITAEDIRKRPPAnDVSEIIRTMP 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  78 GVYVQEEDGYGLRPN---IGMRGTGTgRNDKISVmeDGvlvapAPYSAPSAYyfpTMGR-----------------MESI 137
Cdd:PRK13524  81 GVNLTGNSTSGQRGNnrqIDIRGMGP-ENTLILI--DG-----KPVSSRNSV---RYGWrgerdtrgdtnwvppemIERI 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 138 EVLKGAASVKYGPRTTGGVLNLVSRSlPTEGSKGLLNAELGSdgfyKGHAYFGKKK----NNAAGLVEVFT---YG---- 206
Cdd:PRK13524 150 EVLRGPAAARYGNGAAGGVVNIITKK-PTGEWHGSWNTYFNA----PEHKAEGATKrtnfSLSGPLGDELSfrlYGnlnk 224
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 207 --AD------GFKELPVGSDNS-------GFEKNDFLLKFGFDFGDNeaHSLEMKVKYSdeRSDETYMGltdadyqenpy 271
Cdd:PRK13524 225 tqADawdinqGHQSARTGSYAGtlpagreGVINKDINGLLRWDFAPL--QSLELEAGYS--RQGNLYAG----------- 289
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 272 rryaasqnDEMNTQHNAYQVNYayrFGKGYELLataYLNDF---HRNWYKASKVSSSYLeQYSEFEANPTSEGIEG---- 344
Cdd:PRK13524 290 --------DTQNTNSDALVKSL---YGKETNRM---YRQNYaltHRGGWDNGVSTSNYA-QYEHTRNSRLPEGLAGgteg 354
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 345 -------VAVKANNRDYQAKGlqtEFHIP---AGNHYITVGARYHEDEMDrfqwqDKYTLNQDLSMTLTEKGVPGSDSNR 414
Cdd:PRK13524 355 ifnekatQFSTIDLDDVMLHS---EVNLPfdlLVNQTLTLGTEWNQQRMK-----DPSSNTQALTSGGAIPGVSATGRSP 426
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 415 VDSAEATTLFIQDEWSL-DALVISAGLRYEDITIKREEWAksdptrangltknisndteilvPSLGATYTVSDSLTLLAG 493
Cdd:PRK13524 427 YSKAEIFSLFAEDNMELtDSTMLTPGLRFDHHSIVGNNWS----------------------PSLNLSQGLGDDFTLKMG 484
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 494 IQKGY-AP----AAP----------------------GNADQEEEESVNIELGGRYDYAGFNGEVIYFNSDYTNMHGNCT 546
Cdd:PRK13524 485 IARAYkAPnlyqTNPnyilyskgqgcyasagngcylqGNDDLKAETSVNKEIGLEFKRDGWLAGLTWFRNDYRNKIEAGY 564
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 547 AAVGCNDNNIGDQY---NYGEVSVSGFEVSAgKVFATDTASFPVRLTYTYTNsefENDfesdlwgsvKSGDAMPYVPENQ 623
Cdd:PRK13524 565 VPVGTNSVGKTDIYqweNVPKAVVEGLEGTL-NVPVSETVNWTNNLTYMLQS---KNK---------TTGDPLSIIPEYT 631
                        730       740       750       760       770       780       790
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 739095827 624 L----------ALSFGAEFSSFVFDTQMRYVSDAhADLSTSGRNAIDSRVVWDLAAKYLIDDKQKVYLTVDNLFDK 689
Cdd:PRK13524 632 LnstlswqateDLSLQSTFTWYGKQKPKKYNYKG-QPVTGSATKEVSPYSIVGLSATYDVTKNVSLTGGVDNLFDK 706
Plug pfam07715
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ...
45-156 3.79e-20

TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.


Pssm-ID: 462243 [Multi-domain]  Cd Length: 107  Bit Score: 86.17  E-value: 3.79e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827   45 AINDIPGSATFISEQDLEKFEYTDISRVLSAVPGVYVQEEDGyGLRPNIGMRGTGTGRNdkiSVMEDGVLVAPAPYSAPS 124
Cdd:pfam07715   1 DLRDTPGSVSVVTAEDIEDQGATNLADALRGVPGVSVSSGGG-GGGSSISIRGFGSNRV---LVLVDGVPLNSGGGGSVD 76
                          90       100       110
                  ....*....|....*....|....*....|..
gi 739095827  125 AYYFPTMGrMESIEVLKGAASVKYGPRTTGGV 156
Cdd:pfam07715  77 LNSIDPED-IERVEVLKGPASALYGSGAIGGV 107
PRK13484 PRK13484
IreA family TonB-dependent siderophore receptor;
1-716 7.02e-19

IreA family TonB-dependent siderophore receptor;


Pssm-ID: 139605 [Multi-domain]  Cd Length: 682  Bit Score: 91.22  E-value: 7.02e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827   1 MKPTFIVSTLSTAIALSLSANAFAKDVTKEEKNFeqITVIGSASAINDIPGSATFISEQDLEKFEYTDISRVLSAVPGVY 80
Cdd:PRK13484   1 MKNKYIIAPGIAVMCSAVISSGYASSDKKEDTLV--VTASGFTQQLRNAPASVSVITSEQLQKKPVSDLVDAVKDVEGIS 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  81 VqeeDGYGLRPNIGMRGTgTGRNDKISV---MEDGVLVAPAPYSAPSAYYFPTMGRMESIEVLKGAASVKYGPRTTGGVL 157
Cdd:PRK13484  79 I---TGGNEKPDISIRGL-SGDYTLILVdgrRQSGRESRPNGSGGFEAGFIPPVEAIERIEVIRGPMSSLYGSDAIGGVI 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 158 NLVSRSLPTEGSKGLLnaelGSDGFYKGHAYFGKKKNN----AAGLVE----VFTYGADGFKELPVGSDNSGFEKN-DFL 228
Cdd:PRK13484 155 NIITKPVNNQTWDGVL----GLGGIIQEHGKFGNSTTNdfylSGPLIKdklgLQLYGGMNYRKEDSISQGTPAKDNkNIT 230
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 229 LKFGFDFGDNEAHSLEMKvKYSDERSdetymgLTDADYQENPYRRYAASQNDEMNTQHNAyQVNYAYRFGKGYELLATAY 308
Cdd:PRK13484 231 ATLQFTPTESQKFVFEYG-KNNQVHT------LTPGESLDAWTMRGNLKQPNSKRETHNS-RSHWVAAWNAQGEILHPEI 302
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 309 lndfhrnwykaskvsSSYLEQYSEFEanpTSEGIEgvavKANNRDYQAKGLQTEFHIPAGNHYITVgarYHEDEMDRFQW 388
Cdd:PRK13484 303 ---------------AVYQEKVIREV---KSGKKD----KYNHWDLNYESRKPEITNTIIDAKVTA---FLPENVLTIGG 357
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 389 QDKYTLNQDLSMTltekGVPGSDSNRVdSAEATTLFIQDEWSL-DALVISAGLRYEDITIKREEWAksdptrangltkni 467
Cdd:PRK13484 358 QFQHAELRDDSAT----GKKTTETQSV-SIKQKAVFIENEYAAtDSLALTGGLRLDNHEIYGSYWN-------------- 418
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 468 sndteilvPSLGATYTVSDSLTLLAGIQKGY-APA----AP--------------GNADQEEEESVNIELGGRYDY-AGF 527
Cdd:PRK13484 419 --------PRLYAVYNLTDNLTLKGGIAKAFrAPSirevSPgfgtltqggasimyGNRDLKPETSVTEEIGIIYSNdSGF 490
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 528 NGEVIYFNSDYTNMHGNCTaaVGCNDNNIG---DQY-NYGEVSVSGFEVSAGKVFATDtasFPVRLTYTYTNSEFENDFE 603
Cdd:PRK13484 491 SASATLFNTDFKNKLTSYD--IGTKDPVTGlntFIYdNVGEANIRGVELATQIPVYDK---WHVSANYTFTDSRRKSDDE 565
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 604 SdLWGSVKSGDAMPYVPENQL----------ALSFgaeFSSFVFDTQMRYVSDAHADLSTSGRNAIDSrvvWDLAAKYLI 673
Cdd:PRK13484 566 S-LNGKSLKGEPLERTPRHAAnaklewdytqDITF---YSSLNYTGKQIWAAQRNGAKVPRVRNGFTS---MDIGLNYQI 638
                        730       740       750       760
                 ....*....|....*....|....*....|....*....|....
gi 739095827 674 DDKQKVYLTVDNLFDKTYVA-NRANGGIQPGKPRTLQVGYSYSF 716
Cdd:PRK13484 639 LPDTLINFAVLNVTDRKSEDiDTIDGNWQVDEGRRYWANVRVSF 682
PRK13513 PRK13513
ligand-gated channel protein;
9-716 9.70e-19

ligand-gated channel protein;


Pssm-ID: 184104 [Multi-domain]  Cd Length: 659  Bit Score: 90.60  E-value: 9.70e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827   9 TLSTAIALSLSANAFAKDvtKEEKNFEQITVIGSASA----INDIPGSATFISEQDLEKFEYTDISRVLSAVPGVYVQee 84
Cdd:PRK13513  10 KAALVIAAAISSQAYAAE--KTNTATPTDTMVVTASGfqqrIQDAPASISVVTREQLENKAYRDVTDALKDVPGVVVT-- 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  85 dGYGLRPNIGMRGT-----------------GTGRNDKISVMEDGVLvapapysapsayyfPTMGRMESIEVLKGAASVK 147
Cdd:PRK13513  86 -GGGSTSDISIRGMaakytlilvdgkrvdtrSTRPNSDGSGIEQGWL--------------PPLAAIERIEVVRGPMSSL 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 148 YGPRTTGGVLNLVSRSLPTE--GS---KGLLNAELGSDGFYKGHAYfgkkknnAAG-----LVEVFTYG----------A 207
Cdd:PRK13513 151 YGSDAMGGVINIITRKVQKEwhGSlraDATLQEDSKSGDIFQTNAY-------ASGplidgLLGLKVSGllshrsedkiI 223
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 208 DGFKELPVGSDNSGF-----EKNDFLLKFGFDFGD---NEAHSLEMKVKYSDERSDETYMGLTdadyqenpyrryaasqn 279
Cdd:PRK13513 224 DGYNEQRMRNGTATFsltpdDNNEFDFEIGRYVQDrnsTPGRTLALNGTNSDTQYDRNNYAIT----------------- 286
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 280 demntqHNAYqvnyaYRFGKgyellataylndfhrnwykaskvSSSYLEQysEFEANPTSEgiegvavkannRDYQAKGL 359
Cdd:PRK13513 287 ------HNGY-----YDFGN-----------------------STSYIQR--DETRNPSRQ-----------MKSVDTIF 319
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 360 QTEFHIPAGNHYITVGARYHEDEMdrfqwQDKYtlNQDLSmtltekgvpGSDSNRVDSAEAtTLFIQDEWSL-DALVISA 438
Cdd:PRK13513 320 NTQTSFLLDDHTLSLGGQYRYEEL-----YDKG--NQLPS---------ASDLNKLTRWSW-ALFAEDEWQMtNDFALTG 382
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 439 GLRYEditiKREEWAksdptrangltkniSNDTeilvPSLGATYTVSDSLTLLAGIQKGY-AP----AAP---------- 503
Cdd:PRK13513 383 GIRMD----QDQNYG--------------THWT----PRLYGVWHLADQWTLKGGVSTGYrSPdlrqATDnwgqltgggg 440
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 504 ------GNADQEEEESVNIELGGRYDYA-GFNGEVIYFNSDY------------TNMHGNCTAAvGCNDNNIGDQYNYGE 564
Cdd:PRK13513 441 lpalilGNSDLKPEKSISQEIGILWDNQeNLNASVTLFNTDFkdkitevrncdtTNTDGQCVFN-GINYDFISDRINVDK 519
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 565 VSVSGFEVSAGKVFATDtasFPVRLTYTYTNSEfendfesdlwgsVKSGDaMPYVPENQL-------ALSFGA--EFSSF 635
Cdd:PRK13513 520 ANMRGVEATFNWDINQA---WSLATNYTFTQSE------------QKSGA-FAGQPLNQMpkhmanaTLNWQTteDFATW 583
                        730       740       750       760       770       780       790       800
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 636 vfdTQMRYVSDAHADLS-TSGRNAIDSRVVWDLAAKYLIDDKQKVYLTVDNLFDKTyVANRANGGIQPGkpRTLQVGYSY 714
Cdd:PRK13513 584 ---IRINYRGKTSEYLNrTSMGSGTPSYTFVDLGASYQLTKELRLMGGVYNLLDKR-VDIDVNDKVLDG--RRYMVGASY 657

                 ..
gi 739095827 715 SF 716
Cdd:PRK13513 658 DF 659
PRK13486 PRK13486
TonB-dependent receptor;
1-691 3.17e-18

TonB-dependent receptor;


Pssm-ID: 139606 [Multi-domain]  Cd Length: 696  Bit Score: 89.31  E-value: 3.17e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827   1 MKPTFIVSTLSTAIALSLSANAFAKDVTkeeknfeQITVIGSASAINDIPGSATFISEQDLEKFEYTDISRVLSAVPGVY 80
Cdd:PRK13486   1 MRITTLASVVIPCLGFSASSIAAAEDVM-------IVSASGYEKKLTNAAASVSVISQEELQSSQYHDLAEALRSVEGVD 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  81 VQEEDGY--GLRPNI-GMRGTGTgrndkiSVMEDGVL------VAPAPYSAPSAYYFPTMGRMESIEVLKGAASVKYGPR 151
Cdd:PRK13486  74 VESGTGKtgGLEISIrGMPASYT------LILIDGVRqggssdVTPNGFSAMNTGFMPPLAAIERIEVIRGPMSTLYGSD 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 152 TTGGVLNLVSRSlptegskgllNAELGSDGFYKGhayFGKKKNNAAGLVEVFTYGADGfkelPVGSDnsgfekndfllkf 231
Cdd:PRK13486 148 AMGGVVNIITRK----------NADKWLSSVNAG---LNLQESNKWGNSSQFNFWSSG----PLVDD------------- 197
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 232 gfdfgdneahSLEMKVKYS-DERSDETYMGLTDADYQENPYRR------------YAASQNDEMNTQHNAYQVNYAYRFG 298
Cdd:PRK13486 198 ----------SVSLQVRGStQQRQGSSVTSLSDTAATRIPYPTesqnynlgarldWKASEQDVLWFDMDTTRQRYDNRDG 267
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 299 K------GYEllataylndfHRNWYKASKVSSSYLEQY------SEFEANPTSEGIEGVAVKANNRDYQAKG-------- 358
Cdd:PRK13486 268 QlgsltgGYD----------RTLRYERNKISAGYDHTFtfgtwkSYLNWNETENKGRELVRSVLKRDKWGLAgqprelke 337
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 359 ----LQTEFHIPAG-NHYITVGARYhedemdrfqwqdkytlnQDLSMtltEKGVPGSDSNRVDSAEATTLFIQDEWSL-D 432
Cdd:PRK13486 338 snliLNSLLLTPLGeSHLVTVGGEF-----------------QSSSM---KDGVVLASTGETFRQKSWSVFAEDEWHLtD 397
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 433 ALVISAGLRYEditiKREEWAKSdptrangltknisndteiLVPSLGATYTVSDSLTLLAGIQKGY-APAAP-------- 503
Cdd:PRK13486 398 ALALTAGSRYE----HHEQFGGH------------------FSPRAYLVWDVADAWTLKGGVTTGYkAPRMGqlhkgisg 455
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 504 ----------GNADQEEEESVNIELGGRYD-YAGFNGEVIYFNSDYTNMHGNCTAavgcnDNNIGDQYNYGEVSVSGFEV 572
Cdd:PRK13486 456 vsgqgktnllGNPDLKPEESVSYEAGVYYDnPAGLNANVTGFMTDFSNKIVSYSI-----NDNTNSYVNSGKARLHGVEF 530
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 573 SAGKVFATDTASfpVRLTYTYTNSEfENDFESdlwgsvkSGDAMPYVPEN--------QLALSFGAEFSSFVFDTQMRYV 644
Cdd:PRK13486 531 AGTLPLWSEDVT--LSLNYTWTRSE-QRDGDN-------KGAPLSYTPEHmvnaklnwQITEEVASWLGARYRGKTPRFT 600
                        730       740       750       760       770
                 ....*....|....*....|....*....|....*....|....*....|....
gi 739095827 645 SDaHADLSTSGRNAIDSR-------VVWDLAAKYLIDDKQKVYLTVDNLFDKTY 691
Cdd:PRK13486 601 QN-YSSLSAVQKKVYDEKgeylkawTVVDAGLSWKMTDALTLNAAVNNLLNKDY 653
PRK13528 PRK13528
outer membrane receptor FepA; Provisional
1-716 3.18e-14

outer membrane receptor FepA; Provisional


Pssm-ID: 237413 [Multi-domain]  Cd Length: 727  Bit Score: 76.33  E-value: 3.18e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827   1 MKPTFIVSTLSTAIALSLSANAFAKdvTKEEKNFEQITVIGSAS-AINDIPGsATFISEQDLEKFEYT-DISRVLSAVPG 78
Cdd:PRK13528   3 MRVNKILWLLTVLLVGLNSPVSAAE--SSDDDNGETMVVEATAEqELKQQPG-VSIITAEDIKKRPPVnDLSDIIRKMPG 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  79 VYVQEEDGYGLRPN---IGMRGTGTgRNDKISVmeDGVLVApapySAPSAYYF-----PTMG--------RMESIEVLKG 142
Cdd:PRK13528  80 VNLTGNSASGTRGNnrqIDIRGMGP-ENTLILI--DGVPVT----SRNSVRYSwrgerDTRGdtnwvppeMVERIEVIRG 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 143 AASVKYGPRTTGGVLNLVSRSlPTEGSKGLLNAelgsdgfykghaYFGKKKNNAAGLVEVFTYGADGfkelPVGSDNSGF 222
Cdd:PRK13528 153 PAAARYGSGAAGGVVNIITKR-PTNDWHGSLSL------------YTNQPESSKEGATRRANFSLSG----PLAGDALTM 215
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 223 E------KNDfllkfGFDFGDNEAHSlemkVKYSDERSdetymGLTDAD------YQENP---------YRR----YAAs 277
Cdd:PRK13528 216 RlygnlnKTD-----ADSWDINSSAG----TKNAAGRE-----GVRNKDingvlsWKMTPqqildfeagYSRqgniYAG- 280
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 278 qnDEMNTQHNAY---------QVNYAYRfgKGYELLataylndfHR-NW-YKASKVSSSYLEQYSEFEANPTSEGIEGVA 346
Cdd:PRK13528 281 --DTQNSNSSAVteslaksgkETNRLYR--QNYGLT--------HNgIWdWGQSRLGFYYEKTNNTRMNEGLAGGGEGRI 348
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 347 VKANNRD------YQAKGlqtEFHIPAG---NHYITVGARYHEDEMDrfqwqDKYTLNQDLSmTLTEKGVPGSDSNRV-- 415
Cdd:PRK13528 349 TADQTFTtsrlesYRTSG---ELNVPLNwlfEQTLTVGAEWNRDELN-----DPSSTSLTVK-DGDIGGISGSAADRSsk 419
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 416 DSAEATTLFIQDEWSL-DALVISAGLRYEDITIKREEWAksdptrangltknisndteilvPSLGATYTVSDSLTLLAGI 494
Cdd:PRK13528 420 NKSEISALYVEDNIEPvPGTNLIPGLRFDYHSEFGSNWS----------------------PSLNLSQELGDYFKVKAGI 477
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 495 QKGY-AP----------------AAP-----------GNADQEEEESVNIELGGRYDYAGFNGEVIYFNSDYTNMHGNCT 546
Cdd:PRK13528 478 ARAFkAPnlyqssegyllysrgnGCPkditsggcylvGNKNLDPEISVNKEIGLEFTVDDYHASVTYFRNDYQNKIVAGD 557
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 547 AAVG--CNDNNIGDQYNYGEVSVSGFEVSAGKVFATDTASFPVRLTYTYTNSEfendfesdlwgsVKSGDAMPYVPENQL 624
Cdd:PRK13528 558 DVIGrtASGAYILQWQNGGKAVVEGLEGNLLVPLMKDRLNWNTNATYMITSEQ------------KDTGNPLSVIPKYTI 625
                        730       740       750       760       770       780       790       800
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 625 ----------ALSFGAEFSSFVFDTQMRYVSDAHADLSTSGRNAIDSRVVWDLAAKYLIDDKQKVYLTVDNLFDKTYV-- 692
Cdd:PRK13528 626 nstldwqitqALSANVNWTLYGKQKPRTHAESRSEETGGLSGKELGAYSLVGVNVNYDINKNLRLNVGVSNLFDKQIYre 705
                        810       820
                 ....*....|....*....|....
gi 739095827 693 ANRANGGIQPGkpRTLQVGYSYSF 716
Cdd:PRK13528 706 GEGANTYNEPG--RAYYAGVTASF 727
PRK14049 PRK14049
ferrioxamine B receptor precursor protein; Provisional
6-689 4.26e-10

ferrioxamine B receptor precursor protein; Provisional


Pssm-ID: 172541 [Multi-domain]  Cd Length: 726  Bit Score: 63.00  E-value: 4.26e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827   6 IVSTLSTAIALSLSANAFAKDVTKEEKNFEQITV-------------------IGSASAIN--------DIPGSATFISE 58
Cdd:PRK14049   9 IRAALAGTSALALVATAQAQDAGQESVSNEASTAletlvvnggsggvitadgyVATSSATGakvdtpflETPQSISSVTE 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  59 QDLEKFEYTDISRVLSAVPGVYVqeeDGYGLRPNI------GMRGTGTGrndkisVMEDGVlvapAPYSAPSAYYFPTMG 132
Cdd:PRK14049  89 QQLKDRNPQTLLETLAYTPGARV---GAFGFDPRFdaffvrGFDVTYTG------VFRDNL----RQPGASSSIFKTEPY 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 133 RMESIEVLKGAASVKYGPRTTGGVLNLVSRSlPTEGSKGLLNAELGSDGFYKGHAYF-GKKKNNAAGLVEVFTYGADGFK 211
Cdd:PRK14049 156 GLEGVSILRGPSSALYGASGAGGLFNLITKR-PTEEPLREVQVQYGTNNRYQGQFDFsGPVNETDPVYYRLTGLLRDADT 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 212 ELPVGSDNSGFekndflLKFGFDFGDNEAHSLEMKVKYSDERSDETYMGLTDADYQE-------NPyrryaaSQNDEMNT 284
Cdd:PRK14049 235 EQVGVPDDRAY------IAPAFTWKPDEDTRLTVLGEYSRTKTGGTAAYYNDPLTGEvtdifagNP------AFNDSVQK 302
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 285 QHNAyqvnyayrfgkGYELlaTAYLND---FHRNW-YKASKVSSSYLEQYSEFEANPT----SEGIEGVAVKANNRDYQa 356
Cdd:PRK14049 303 QGRI-----------GYEF--EHRLNDtfvFRQNArVSTLNIDADWAFAYAPNAADPTlldsSAGTYDERLTAFVIDNQ- 368
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 357 kgLQTEFHIPAGNHYITVGARYHEdemDRFQWQDKYTLNQDLSMTLTEKGVPGS----DSNRVDSAEATTLFIQDEWSLD 432
Cdd:PRK14049 369 --LEAKFDTGAFEHTLLAGVDYTK---LRFRALNGRGVSPPLDTKNPTQGRPVAaidfSTRTVQDQWQLGTYLQDQIRYD 443
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 433 ALVISAGLRYeditikreEWAKSDPTR---ANGLTKNISNDTEILVPSLGATYTVSDSLTLLAGIQKGYAPAAPGNADQ- 508
Cdd:PRK14049 444 AWTLTAGGRY--------DWVSTDTDTtdlATDSLTTVSQKDKEFSGRIGLTYETDFGLAPYISYSTAFSPNAGFNRATn 515
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 509 ---EEEESVNIELGGRYDYAGFNGEV--IYFNSDYTNmhGNCTAAVGCNDNNIGDQYNYGEVSVSGFEVSAGKVFATdta 583
Cdd:PRK14049 516 qpfKPTESEQQEVGVKYLLPNSNTLItaALFNIDQTN--GLYYEVVFLAAGPTNIQVQRGKLRSRGFELEANTSLDN--- 590
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 584 SFPVRLTYTYTNSEFENDFEsdlwGSVksGDAMPYVPENQLA------LSFGAEFSSFVFDTQMRYVSDAHADLSTSGRN 657
Cdd:PRK14049 591 GLSLIASYTYTDVKIIQGPE----GTI--GNEVSSVPNHMASawahytLPEGGPLYGLGLGAGARFVGSSYGNDQNTFKN 664
                        730       740       750
                 ....*....|....*....|....*....|....*...
gi 739095827 658 aiDSRVVWDLAAKY---LIDDK-QKVYLTVD--NLFDK 689
Cdd:PRK14049 665 --SSRVLFDASVGYdfaAIDKKyEGLMLQVNatNLFDR 700
PRK14050 PRK14050
TonB-dependent siderophore receptor;
42-693 5.03e-10

TonB-dependent siderophore receptor;


Pssm-ID: 237595 [Multi-domain]  Cd Length: 728  Bit Score: 62.90  E-value: 5.03e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  42 SASAINDIPGSATFISEQDLEKFEYTD-ISRVLSAVPGVYVQ------EEDGYGLRpniGMRGTGTGrndkisVMEDGVL 114
Cdd:PRK14050  72 TDTPITEIPQSVSVVGRQEMDDRGVTNkVDEALRYTPGVLSQpfgtdgDTDWFYIR---GFDATQTG------VFLDGLN 142
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 115 VapapYSapsaYYF------PTMgrMESIEVLKGAASVKYGPRTTGGVLNLVSRSlPTEgsKGLLNAELGSDGFykGHAY 188
Cdd:PRK14050 143 L----FS----YGFggfqidPFM--LERVEVLKGPASVLYGGSNPGGIVNMVSKR-PLD--EPLYYTEIGINSY--GNAF 207
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 189 FGKKKNNAAGLVEVFTYGADGFKElpvGSDNSGFEKNDF-----------------LLKFGFDFGDNEAHSLEMKVKYSD 251
Cdd:PRK14050 208 TGFDVGDKLSDDGTVRYRVTGKVA---GGDNYSDYSEDLrgfimpqityapddatsLTVYGYLSGLDQVHVGNGFLPYVG 284
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 252 ERSDETYMGLT-DADYQE---NPYRRYAASQNDEMNTQ-HNAYQVNYAYRFGKGYELLATAYLNDFHR-NWYKASKVSSS 325
Cdd:PRK14050 285 TVVDAPFGKIDrDAFYGEpdiDNGSYAQQMLGYEFSHEfDNGWTFSQNARYGHLHKHEKGPYTYGYVGgATGLPDPTGPD 364
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 326 YLEQYSEFEANPTSEgiegvAVKANNRdyqakgLQTEFHIPAGNHYITVGARYHEDEMDrfQWQDKYTLNQdLSMTLTEK 405
Cdd:PRK14050 365 YMLNRIGFEHRSKVD-----SFSIDNR------LEGEFDTGALTHNLLFGLDYKYYRLD--QVQACCGATP-ISATNPVY 430
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 406 GVP-GSDS---NRVDSAEATTLFIQDEWSL-DALVISAGLRYEDItikreewaksDPTRANGLTKNISNDTEILVPSLGA 480
Cdd:PRK14050 431 GTTqGANFvylDQILTQQQIGIYAQDQIRFgDGWLVTLNGRYDYV----------DTDSDARIGTSYESNDGALSGRAGL 500
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 481 TYTVSDSLTLLAGIQKGYAP---AAPGNADQEEEESVNIELGGRYDYAGFNGEVI--YFNSDYTNMhgncTAAVGcndnN 555
Cdd:PRK14050 501 AYEFDNGLTPYVSAATFFNPlvgTLASGPPLKPEEGEQYEAGIKYEPSFIDGLITasVFQITKKNV----TVTDP----L 572
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 556 IGDQYNYGEVSVSGFEVSaGKVFATDtaSFPVRLTYTYTNSEFENDFESDLWGSvksgdaMPY-VPENQLALSFGAEFSS 634
Cdd:PRK14050 573 TFASTQLGEVRSRGFELE-GKVNLDD--NWKALASFTYTDLEITEDANPSLIGN------SPYlVPETQASLWLDYAVTD 643
                        650       660       670       680       690       700
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 739095827 635 FVFD-----TQMRYVSDAHADLSTSGRnaIDSRVVWDLAAKYLIDDkQKVYLTVDNLFDKTYVA 693
Cdd:PRK14050 644 GAFEgvslgAGVRYQGESWADEANTLK--VPAATLFDAAIRYEKND-WGASLNVANLFDKEYVA 704
PRK10064 PRK10064
catecholate siderophore receptor CirA; Provisional
16-689 4.25e-09

catecholate siderophore receptor CirA; Provisional


Pssm-ID: 236646 [Multi-domain]  Cd Length: 663  Bit Score: 59.90  E-value: 4.25e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  16 LSLSANAFAKDVTKEEKNFEQITVIGSASAIN--DIPGSATFISEQDLEKFEYTDISRVLSAVPGVYVQEEDGYglRPNI 93
Cdd:PRK10064  12 LCASAISCAWPVLAVDDDGETMVVTASAVEQNlkDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEGDN--RKGV 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  94 GMRGTGTGRndkISVMEDGVLVapapySAPSAYY----FPT----MGRMESIEVLKGAASVKYGPRTTGGVLNLVSRSLp 165
Cdd:PRK10064  90 SIRGLDSSY---TLILIDGKRV-----NSRNAVFrhndFDLnwipVDAIERIEVVRGPMSSLYGSDALGGVVNIITKKI- 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 166 teGSKglLNAELGSDGFYKGHAYFGKKKNN--------AAGLVEVFTYGADGFKEL--PVGSDNS---------GFEKND 226
Cdd:PRK10064 161 --GQK--WHGTVTVDTTIQEHRDRGDTYNGqfftsgplIDGVLGMKAYGSLAKREKddPQNSTTTdtgetprieGFTSRD 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 227 FLLKFGFDFGDNEAHSLEMKVKYSDERSDetymgltdaDYQENPYRRyaasQNdemntqhnaYQVNYAYRFGKGYELLat 306
Cdd:PRK10064 237 GNVEFAWTPNQNHDFTAGYGFDRQDRDSD---------SLDKNRLER----QN---------YSLSHNGRWDYGNSEL-- 292
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 307 aylndfhrnwykasKVSSSYLEQYSEFEANPtsegiegvaVKANNRDYQAKglqteFHIPAG--NHYITVGARYHEDEMd 384
Cdd:PRK10064 293 --------------KYYGEKVENKNPGNSSP---------ITSESNSIDGK-----YTLPLTaiNQFLTFGGEWRHDKL- 343
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 385 rfqwQDKYTLNqdlsmtltekgvpGSDSNRVdSAEATTLFIQDEWSL-DALVISAGLRYEDITIKREEWAksdptrangl 463
Cdd:PRK10064 344 ----SDAVNLT-------------GGTSSKT-SASQYALFVEDEWRIfEPLALTTGVRMDDHETYGDHWS---------- 395
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 464 tknisndteilvPSLGATYTVSDSLTLLAGIQKGY-APA----AP--------------GNADQEEEESVNIELGGRYDY 524
Cdd:PRK10064 396 ------------PRAYLVYNATDTVTVKGGWATAFkAPSllqlSPdwtsnscrgackivGSPDLKPETSESWELGLYYMG 463
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 525 A-----GFNGEVIYFNSDYTNM-----HGNCTAA------VGCNDNNIGDQ------YNYGEVSVSGFEVSAGKVFATDt 582
Cdd:PRK10064 464 EegwleGVESSVTVFRNDVDDRisisrTSDVNAApgyqnfVGFETNGRGRRvpvfryYNVNKARIQGVETELKIPFNDE- 542
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 583 asFPVRLTYTYTNSEfendfesdlwgSVKSGDAMP--YVPENQLALSFG---AEFSSFVFDTQMRYVSDAHADlsTSGRN 657
Cdd:PRK10064 543 --WKLSLNYTYNDGR-----------DVSNGENKPlsDLPFHTANGTLDwkpLALEDWSFYVSGNYTGQKRAD--SATAK 607
                        730       740       750
                 ....*....|....*....|....*....|..
gi 739095827 658 AIDSRVVWDLAAKYLIDDKQKVYLTVDNLFDK 689
Cdd:PRK10064 608 TPGGYTIWNTGAAWQVTKDVKLRAGVLNLGDK 639
PRK10044 PRK10044
ferrichrome outer membrane transporter; Provisional
9-693 7.10e-07

ferrichrome outer membrane transporter; Provisional


Pssm-ID: 236643 [Multi-domain]  Cd Length: 727  Bit Score: 52.84  E-value: 7.10e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827   9 TLSTAIAlSLSANAFAKDVTKEEKnfeqITVIGSASA-------------------------INDIPGSATFISEQDLEK 63
Cdd:PRK10044  19 VVATAVS-GMSVYAQAAVEPKEET----ITVTAAPAPqesawgpaatiaakrsatgtktdtpIEKTPQSISVVTAEEMAL 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  64 FEYTDISRVLSAVPGVYVQEEDGYGLRPNIGMRG-TGTGRNDKISVmeDGVLVAPAPYSapSAYYFPTMgrMESIEVLKG 142
Cdd:PRK10044  94 HQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGfAASGQSQNNYL--DGLKLQGNFYN--DAVIDPYM--LERAELMRG 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 143 AASVKYGPRTTGGVLNLVSRSLPTEGSKGlLNAELGSDGFYKGHAYFGKKKNNAaglvEVFTYGADGfkelpVGSDNSGF 222
Cdd:PRK10044 168 PVSVLYGKSNPGGLLNMVSKRPTTEPLKE-VQFKMGTDNLFQTGFDFSDALDDD----GVYSYRLTG-----LARSANAQ 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 223 EKND----FLLKFGFDFGDNEAHSLEMKVKYSDErSDETYMG----------LTDA-----DYQE----NPYRR------ 273
Cdd:PRK10044 238 QKGSeeqrYAIAPSFTWRPDDKTNFTFLSYFQNE-PETGYYGwlpkegtvepLPNGkrlptDFNEgaknNTYSRnekmvg 316
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 274 YAASQ--NDEMNTQHNAY--QVNYAYR--FGKGYELLATAYLNdfhrnwyKASKVSSSYLEQYSefeanptsegiegvav 347
Cdd:PRK10044 317 YSFDHefNDTFTVRQNLRyaENKTSQRsvYGYGVCSDKGHYLN-------RGYVVDDEKLQNFS---------------- 373
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 348 kannRDYQakgLQTEFHIPAGNHYITVGARYHEDEMDRFQW---------QDKYTlNQDLSMTLTEKGVPGSDSNRvdsA 418
Cdd:PRK10044 374 ----VDTQ---LQSKFATGDVDHTLLTGVDFMRMRNDINAWfgyadsvplLNLYG-PVNTDFDFNANSGPYQILNK---Q 442
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 419 EATTLFIQDEWSLDALVISAGLRYeditikreEWAKSDPTRANGLTKNISNDTE---------ILVPSLGATYTVSDSLT 489
Cdd:PRK10044 443 KQTGLYVQDQAEWDKWLVTLGGRY--------DWADQSSLNRVNGTTDKRDDKQftwrggvnyLFDNGITPYFSYSESFE 514
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 490 LLAGIQKGYAPAAPGNADQEEeesvnielggrydyAGfngeVIYFNSDytnMHGNCTAAVG--CNDNNI-GDQYNY---- 562
Cdd:PRK10044 515 PSSGTGKDGNIFAPSKGKQYE--------------AG----VKYVPKD---RPIVVTGAVYqlTKTNNLtADPENSffsv 573
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 563 --GEVSVSGFEVSAGkvfATDTASFPVRLTYTYTNSEFENDfesdlwgSVKSGDAMPYVPENQLAL-----SFGAEFSSF 635
Cdd:PRK10044 574 qgGEIRARGVELEAK---AALSANVNVTGSYTYTDAEYTTD-------TTYKGNTPAQVPKHMASLwadytFFDGPLSGL 643
                        730       740       750       760       770       780
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 739095827 636 VFDTQMRYVSDAHADLSTS----GRNAIDSRVVWDLAAKYLidDKQKVYLTVDNLFDKTYVA 693
Cdd:PRK10044 644 TLGTGGRYTGSSYGDPANSfkvgSYTVVDALVKYDLARFGM--AGSSVALNVNNLFDREYVA 703
PRK09840 PRK09840
catecholate siderophore receptor Fiu; Provisional
554-707 7.47e-05

catecholate siderophore receptor Fiu; Provisional


Pssm-ID: 182105 [Multi-domain]  Cd Length: 761  Bit Score: 46.34  E-value: 7.47e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 554 NNIGDQYNYGEVSVSGFEVSA-GKVfatdTASFPVRLTYTYTNSEFENdfesdlwGSVKSGDA---MPYVPENQLAL--S 627
Cdd:PRK09840 601 NDDGTYSQYGKKRVEGYELSVaGNI----TPAWQVIAGYTQQKATVKN-------GKDVAQDGsssLPYTPEHAFTLwsQ 669
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827 628 FGAEFSsFVFDTQMRYVSDAH--ADLSTSGRNAIDSRVVWDLAAKYLIDDKQKVYLTVDNLFDKTYVA--NRANGGIQPG 703
Cdd:PRK09840 670 YQATDD-LSVGGGARYIGSMHrgSDGAVGTPAFTEGYWVADAKLGYRVNRNLDLQLNVYNLFDTDYVAsiNKSGYRYHPG 748

                 ....
gi 739095827 704 KPRT 707
Cdd:PRK09840 749 EPRT 752
btuB PRK10641
TonB-dependent vitamin B12 receptor BtuB;
46-182 1.75e-03

TonB-dependent vitamin B12 receptor BtuB;


Pssm-ID: 236730 [Multi-domain]  Cd Length: 614  Bit Score: 41.52  E-value: 1.75e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739095827  46 INDIPGSATFISEQDLEKFEYTDISRVLSAVPGVYVQEEDGYGLRPNIGMRGTGTgrnDKISVMEDGVLVAPAPYSAPSA 125
Cdd:PRK10641  39 VSTVLAPTTVVTRDDIDRWQSKSVNDVLRRLPGVDIAQNGGLGQLSSLFIRGTNS---SHVLVLIDGVRLNQAGISGSAD 115
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 739095827 126 YYFPTMGRMESIEVLKGAASVKYGPRTTGGVLNLVSRslpTEGSKGLLNAELGSDGF 182
Cdd:PRK10641 116 LSQIPISLVQRIEYIRGPRSAVYGSDAIGGVVNIITT---RDKPGTTLSAGWGSNGY 169
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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