PRC-barrel domain-containing protein [Agrobacterium pusense]
Protein Classification
PRC-barrel domain-containing protein( domain architecture ID 10525995)
PRC-barrel domain-containing protein similar to photosystem reaction center subunit H (PRCH), a component of the reaction center (RC), which is an integral membrane protein-pigment complex that catalyzes light-induced reduction of ubiquinone to ubiquinol, generating a transmembrane electrochemical gradient of protons used to produce ATP by ATP synthase
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| PRC | pfam05239 | PRC-barrel domain; The PRC-barrel is an all beta barrel domain found in photosystem reaction ... |
71-130 | 1.20e-12 | ||
PRC-barrel domain; The PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, archaea and plants. This domain is also present at the carboxyl terminus of the pan-bacterial protein RimM, which is involved in ribosomal maturation and processing of 16S rRNA. A family of small proteins conserved in all known euryarchaea are composed entirely of a single stand-alone copy of the domain. : Pssm-ID: 398765 Cd Length: 78 Bit Score: 60.38 E-value: 1.20e-12
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| Name | Accession | Description | Interval | E-value | ||
| PRC | pfam05239 | PRC-barrel domain; The PRC-barrel is an all beta barrel domain found in photosystem reaction ... |
71-130 | 1.20e-12 | ||
PRC-barrel domain; The PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, archaea and plants. This domain is also present at the carboxyl terminus of the pan-bacterial protein RimM, which is involved in ribosomal maturation and processing of 16S rRNA. A family of small proteins conserved in all known euryarchaea are composed entirely of a single stand-alone copy of the domain. Pssm-ID: 398765 Cd Length: 78 Bit Score: 60.38 E-value: 1.20e-12
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| YlmC | COG1873 | Sporulation protein YlmC, YlmC/YmxH family, contains PRC-barrel domain [General function ... |
76-131 | 8.86e-09 | ||
Sporulation protein YlmC, YlmC/YmxH family, contains PRC-barrel domain [General function prediction only]; Pssm-ID: 441477 Cd Length: 70 Bit Score: 49.82 E-value: 8.86e-09
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| Name | Accession | Description | Interval | E-value | ||
| PRC | pfam05239 | PRC-barrel domain; The PRC-barrel is an all beta barrel domain found in photosystem reaction ... |
71-130 | 1.20e-12 | ||
PRC-barrel domain; The PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, archaea and plants. This domain is also present at the carboxyl terminus of the pan-bacterial protein RimM, which is involved in ribosomal maturation and processing of 16S rRNA. A family of small proteins conserved in all known euryarchaea are composed entirely of a single stand-alone copy of the domain. Pssm-ID: 398765 Cd Length: 78 Bit Score: 60.38 E-value: 1.20e-12
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| YlmC | COG1873 | Sporulation protein YlmC, YlmC/YmxH family, contains PRC-barrel domain [General function ... |
76-131 | 8.86e-09 | ||
Sporulation protein YlmC, YlmC/YmxH family, contains PRC-barrel domain [General function prediction only]; Pssm-ID: 441477 Cd Length: 70 Bit Score: 49.82 E-value: 8.86e-09
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| Blast search parameters | ||||
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