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Conserved domains on  [gi|739563828|ref|WP_037421961|]
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MULTISPECIES: DUF3293 domain-containing protein [Shewanella]

Protein Classification

DUF3293 domain-containing protein( domain architecture ID 10569473)

DUF3293 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3293 pfam11697
Protein of unknown function (DUF3293); This bacterial family of proteins has no known function.
 32-103 6.59e-29

Protein of unknown function (DUF3293); This bacterial family of proteins has no known function.


:

Pssm-ID: 432009  Cd Length: 73  Bit Score: 100.74  E-value: 6.59e-29
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 739563828   32 ITAHNPASTPLTPSQNRLLDRQLLREIELLGSPYRALIGASPDLSHMEKSWAVF-IDRSMALQLGKKFNQYAI 103
Cdd:pfam11697   1 ITAWNPRSRLLSDAENAARQRALLRELEQLGLPYLPGEGTDPDGSWPEPSFLVLgLDLEEARALGRKFGQNAV 73
 
Name Accession Description Interval E-value
DUF3293 pfam11697
Protein of unknown function (DUF3293); This bacterial family of proteins has no known function.
 32-103 6.59e-29

Protein of unknown function (DUF3293); This bacterial family of proteins has no known function.


Pssm-ID: 432009  Cd Length: 73  Bit Score: 100.74  E-value: 6.59e-29
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 739563828   32 ITAHNPASTPLTPSQNRLLDRQLLREIELLGSPYRALIGASPDLSHMEKSWAVF-IDRSMALQLGKKFNQYAI 103
Cdd:pfam11697   1 ITAWNPRSRLLSDAENAARQRALLRELEQLGLPYLPGEGTDPDGSWPEPSFLVLgLDLEEARALGRKFGQNAV 73
 
Name Accession Description Interval E-value
DUF3293 pfam11697
Protein of unknown function (DUF3293); This bacterial family of proteins has no known function.
 32-103 6.59e-29

Protein of unknown function (DUF3293); This bacterial family of proteins has no known function.


Pssm-ID: 432009  Cd Length: 73  Bit Score: 100.74  E-value: 6.59e-29
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 739563828   32 ITAHNPASTPLTPSQNRLLDRQLLREIELLGSPYRALIGASPDLSHMEKSWAVF-IDRSMALQLGKKFNQYAI 103
Cdd:pfam11697   1 ITAWNPRSRLLSDAENAARQRALLRELEQLGLPYLPGEGTDPDGSWPEPSFLVLgLDLEEARALGRKFGQNAV 73
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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