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Conserved domains on  [gi|739578139|ref|WP_037436138|]
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curli production assembly/transport protein CsgE [Shewanella algae]

Protein Classification

curli production assembly/transport protein CsgE( domain architecture ID 10566287)

curli production assembly/transport protein CsgE is a periplasmic accessory protein that plays a crucial role in curli biogenesiss

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CsgE pfam10627
Curli assembly protein CsgE; Curli are a class highly aggregated surface fibres that are part ...
 36-132 1.14e-48

Curli assembly protein CsgE; Curli are a class highly aggregated surface fibres that are part of a complex extracellular matrix. They promote biofilm formation in addition to other activities. CsgE is a non-structural protein involved in curli biogenesis. CsgE forms an outer membrane complex with the curli assembly proteins CsgG and CsgF.


:

Pssm-ID: 431403  Cd Length: 105  Bit Score: 151.67  E-value: 1.14e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739578139   36 ISGLVIDRTLTRFGKDFGFYYSGYWRDLPFTQGFNVTLYETVFPQAGTLLTLEVNGTRIYQTHFGRRASPIKERAEQAIL 115
Cdd:pfam10627   1 IDGLVLDRTITRFGHDFYRYFSSYWRDLPSSQDFNLTINERPSARAGSLITVEHNQQVIYRTFLGPNRRDIKEEAEQAAD 80

                          90
                  ....*....|....*..
gi 739578139  116 LTIDYIASVRAQSMTGE 132
Cdd:pfam10627  81 IVIDYLAQRQLQALLLD 97
 
Name Accession Description Interval E-value
CsgE pfam10627
Curli assembly protein CsgE; Curli are a class highly aggregated surface fibres that are part ...
 36-132 1.14e-48

Curli assembly protein CsgE; Curli are a class highly aggregated surface fibres that are part of a complex extracellular matrix. They promote biofilm formation in addition to other activities. CsgE is a non-structural protein involved in curli biogenesis. CsgE forms an outer membrane complex with the curli assembly proteins CsgG and CsgF.


Pssm-ID: 431403  Cd Length: 105  Bit Score: 151.67  E-value: 1.14e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739578139   36 ISGLVIDRTLTRFGKDFGFYYSGYWRDLPFTQGFNVTLYETVFPQAGTLLTLEVNGTRIYQTHFGRRASPIKERAEQAIL 115
Cdd:pfam10627   1 IDGLVLDRTITRFGHDFYRYFSSYWRDLPSSQDFNLTINERPSARAGSLITVEHNQQVIYRTFLGPNRRDIKEEAEQAAD 80

                          90
                  ....*....|....*..
gi 739578139  116 LTIDYIASVRAQSMTGE 132
Cdd:pfam10627  81 IVIDYLAQRQLQALLLD 97
PRK10386 PRK10386
curli production assembly/transport protein CsgE;
32-121 2.51e-07

curli production assembly/transport protein CsgE;


Pssm-ID: 236678  Cd Length: 130  Bit Score: 46.69  E-value: 2.51e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739578139  32 DDIEISGLVIDRTLTRFGKDFGFYYSGYWRDlPFTqgFNVTLYETvfPQA--GTLLTLEVNGTRIYQTHFGRRASPIKER 109
Cdd:PRK10386  24 VEVEVPGLLTDHTVSSIGHDFYRAFSDKWES-DYD--GNLTINER--PSArwGSWITITVNQDVIYQTFLFPNKRDFEKT 98

                         90
                 ....*....|..
gi 739578139 110 AEQAILLTIDYI 121
Cdd:PRK10386  99 VVFALDQTEEAL 110
 
Name Accession Description Interval E-value
CsgE pfam10627
Curli assembly protein CsgE; Curli are a class highly aggregated surface fibres that are part ...
 36-132 1.14e-48

Curli assembly protein CsgE; Curli are a class highly aggregated surface fibres that are part of a complex extracellular matrix. They promote biofilm formation in addition to other activities. CsgE is a non-structural protein involved in curli biogenesis. CsgE forms an outer membrane complex with the curli assembly proteins CsgG and CsgF.


Pssm-ID: 431403  Cd Length: 105  Bit Score: 151.67  E-value: 1.14e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739578139   36 ISGLVIDRTLTRFGKDFGFYYSGYWRDLPFTQGFNVTLYETVFPQAGTLLTLEVNGTRIYQTHFGRRASPIKERAEQAIL 115
Cdd:pfam10627   1 IDGLVLDRTITRFGHDFYRYFSSYWRDLPSSQDFNLTINERPSARAGSLITVEHNQQVIYRTFLGPNRRDIKEEAEQAAD 80

                          90
                  ....*....|....*..
gi 739578139  116 LTIDYIASVRAQSMTGE 132
Cdd:pfam10627  81 IVIDYLAQRQLQALLLD 97
PRK10386 PRK10386
curli production assembly/transport protein CsgE;
32-121 2.51e-07

curli production assembly/transport protein CsgE;


Pssm-ID: 236678  Cd Length: 130  Bit Score: 46.69  E-value: 2.51e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739578139  32 DDIEISGLVIDRTLTRFGKDFGFYYSGYWRDlPFTqgFNVTLYETvfPQA--GTLLTLEVNGTRIYQTHFGRRASPIKER 109
Cdd:PRK10386  24 VEVEVPGLLTDHTVSSIGHDFYRAFSDKWES-DYD--GNLTINER--PSArwGSWITITVNQDVIYQTFLFPNKRDFEKT 98

                         90
                 ....*....|..
gi 739578139 110 AEQAILLTIDYI 121
Cdd:PRK10386  99 VVFALDQTEEAL 110
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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