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Conserved domains on  [gi|740841431|ref|WP_038626684|]
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MULTISPECIES: Na+/H+ antiporter subunit D [Corynebacterium]

Protein Classification

monovalent cation/H+ antiporter subunit D( domain architecture ID 11486098)

monovalent cation/H+ antiporter subunit D similar to Bacillus pseudofirmus Na(+)/H(+) antiporter subunit D, one of seven subunits of the Mrp complex that is a Na(+)/H(+) antiporter involved in Na(+) excretion and Na(+) resistance

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK12665 PRK12665
putative monovalent cation/H+ antiporter subunit D; Reviewed
9-526 0e+00

putative monovalent cation/H+ antiporter subunit D; Reviewed


:

Pssm-ID: 237165 [Multi-domain]  Cd Length: 521  Bit Score: 736.39  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431   9 ALIPLPIIVPAATAAIALLLARFPKAQQAIALFSLGSLLGVASALVYLIYAHGVHTVQVGGWDAPIGITLVADNLAVLMI 88
Cdd:PRK12665   3 VLAPLPVLLPLLAAALTLVLGRRPRAQRAISLLALSAVLVLSAVLLYLVDRDGTQAVQLGGWDAPIGITLVVDRLSALML 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  89 TVSQLVLFAVMWFGIGQGISDGDEDEPISVFVPTYMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVLLTLGASSSRTRA 168
Cdd:PRK12665  83 VVSSVVLLAVLVYAIGQGIRDGDEEQPVSIFLPTYLILVAGVSNAFLAGDLFNLYVGFEILLVASYVLLTLGATAARVRA 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 169 GVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHISLRMEDIPDGTRTAIFAVLLVAFAVKAAVFPLSAWLPDSYPTAPSM 248
Cdd:PRK12665 163 GVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELPSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAP 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 249 VTAVFAGLLTKVGVYAIIRTRSVVFPDGRLDDVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTL 328
Cdd:PRK12665 243 VTAVFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVA 322
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 329 GLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAGAQ 408
Cdd:PRK12665 323 GLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEAGAE 402
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 409 NGSATAWILVAGSIITSLLTLYTMILVWSKAFWRDRSDAPEGDTVLAQPAALRERTQMVAIAERDDVGKMPLGMVMPTAL 488
Cdd:PRK12665 403 DGTWLAWALVAGGVVTSLLTLYAVARVWTKAFWRAREDAPEGHLADARPAPLLDDSDDIEFADRDDVGRMPRGMVGATAA 482
                        490       500       510
                 ....*....|....*....|....*....|....*...
gi 740841431 489 LVIASVGVTVLAGPLSNVATEAASNVANVDEYRAAVLG 526
Cdd:PRK12665 483 LVAVGLALTVFAGPLFAISDRAATELLDRSIYITAVLG 520
 
Name Accession Description Interval E-value
PRK12665 PRK12665
putative monovalent cation/H+ antiporter subunit D; Reviewed
9-526 0e+00

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237165 [Multi-domain]  Cd Length: 521  Bit Score: 736.39  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431   9 ALIPLPIIVPAATAAIALLLARFPKAQQAIALFSLGSLLGVASALVYLIYAHGVHTVQVGGWDAPIGITLVADNLAVLMI 88
Cdd:PRK12665   3 VLAPLPVLLPLLAAALTLVLGRRPRAQRAISLLALSAVLVLSAVLLYLVDRDGTQAVQLGGWDAPIGITLVVDRLSALML 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  89 TVSQLVLFAVMWFGIGQGISDGDEDEPISVFVPTYMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVLLTLGASSSRTRA 168
Cdd:PRK12665  83 VVSSVVLLAVLVYAIGQGIRDGDEEQPVSIFLPTYLILVAGVSNAFLAGDLFNLYVGFEILLVASYVLLTLGATAARVRA 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 169 GVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHISLRMEDIPDGTRTAIFAVLLVAFAVKAAVFPLSAWLPDSYPTAPSM 248
Cdd:PRK12665 163 GVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELPSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAP 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 249 VTAVFAGLLTKVGVYAIIRTRSVVFPDGRLDDVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTL 328
Cdd:PRK12665 243 VTAVFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVA 322
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 329 GLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAGAQ 408
Cdd:PRK12665 323 GLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEAGAE 402
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 409 NGSATAWILVAGSIITSLLTLYTMILVWSKAFWRDRSDAPEGDTVLAQPAALRERTQMVAIAERDDVGKMPLGMVMPTAL 488
Cdd:PRK12665 403 DGTWLAWALVAGGVVTSLLTLYAVARVWTKAFWRAREDAPEGHLADARPAPLLDDSDDIEFADRDDVGRMPRGMVGATAA 482
                        490       500       510
                 ....*....|....*....|....*....|....*...
gi 740841431 489 LVIASVGVTVLAGPLSNVATEAASNVANVDEYRAAVLG 526
Cdd:PRK12665 483 LVAVGLALTVFAGPLFAISDRAATELLDRSIYITAVLG 520
HyfB COG0651
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ...
10-439 1.07e-136

Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];


Pssm-ID: 440416 [Multi-domain]  Cd Length: 430  Bit Score: 403.76  E-value: 1.07e-136
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  10 LIPLPIIVPAATAAIALLLARFPKAQQAIALFSLGSLLGVASALVYLIYAHGVHTVQVGGWDAPIGITLVADNLAVLMIT 89
Cdd:COG0651    4 LLILPVLLPLLAAALLLLLGRRRRLQRALSLLASLALLALALALLLQVLAGGPLVYALGGWPAPFGIVLVADRLSALFLL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  90 VSQLVLFAVMWFGIGqgisDGDEDEPISVFVPTYMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVLLTLGASSSRTRAG 169
Cdd:COG0651   84 LTALVALAVLLYSIG----YMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 170 VSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHISLRMEDIPDGTRTAIFAVLLVAFAVKAAVFPLSAWLPDSYPTAPSMV 249
Cdd:COG0651  160 LKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPV 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 250 TAVFAGLLTKVGVYAIIRTRSVVFPD---GRLDDVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGN 326
Cdd:COG0651  240 SALLSGLLTKVGVYAILRVLTLLFGAdpaLFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGT 319
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 327 TLGLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAG 406
Cdd:COG0651  320 PLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAA 399
                        410       420       430
                 ....*....|....*....|....*....|...
gi 740841431 407 AQNGsatAWILVAGSIITSLLTLYTMILVWSKA 439
Cdd:COG0651  400 LEAG---AWLLAAVLLLSSLLTLAYFVRIFGRA 429
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
136-422 4.97e-50

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 174.42  E-value: 4.97e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  136 AGDLFNMYVGFEVLLVASYVLLTL-GASSSRTRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHISLRMEDIPDG-T 213
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIGYwGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSsG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  214 RTAIFAVLLVAFAVKAAVFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRTRSVVFPD-GRLDDVLMWAGLATMLM 292
Cdd:pfam00361  81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSsPFIQQILLILAIISMLL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  293 GILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLIE-RQAGSSSLRSLGSLAK 371
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSVIyRRVHTRNIRDYGGLAK 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 740841431  372 TSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAGAQNGSATAWILVAGSI 422
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
NDH_I_M TIGR01972
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ...
70-429 2.66e-47

proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273903 [Multi-domain]  Cd Length: 481  Bit Score: 172.05  E-value: 2.66e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431   70 WDAPIGIT--LVADNLAVLMITVSQLVLFAVMWFgigqgiSDGDEDEPISVFVPTYMLLNMGVSMAFLAGDLFNMYVGFE 147
Cdd:TIGR01972  63 WIPALGISyhLGVDGISLLLVLLTALLTLLAILA------SWESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWE 136
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  148 VLLVASYVLLTLGASSSRTRAGVSYVMVNMLSSMVFLLA-IGLVYQAVGTVNFAHISLRmeDIPDGTRTAIFAVLLVAFA 226
Cdd:TIGR01972 137 AMLIPMYLLIGVWGGPNRIYAAMKFFLYTLAGSLLMLLAiLGLYFLGGGTFDLLELLNL--PLPFGVQTWLFLAFFIAFA 214
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  227 VKAAVFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRTRSVVFPDGRLD--DVLMWAGLATMLMGILGAMAQNDIK 304
Cdd:TIGR01972 215 VKVPLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYfaPVLAALGVIAIIYGALIALAQTDIK 294
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  305 RLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLLALLYLVPA 384
Cdd:TIGR01972 295 RLIAYSSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFA 374
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 740841431  385 LNLGGIPPFSGFLGKVMLIEAGAQNGSATAWILVAGSIITSLLTL 429
Cdd:TIGR01972 375 MASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYML 419
 
Name Accession Description Interval E-value
PRK12665 PRK12665
putative monovalent cation/H+ antiporter subunit D; Reviewed
9-526 0e+00

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237165 [Multi-domain]  Cd Length: 521  Bit Score: 736.39  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431   9 ALIPLPIIVPAATAAIALLLARFPKAQQAIALFSLGSLLGVASALVYLIYAHGVHTVQVGGWDAPIGITLVADNLAVLMI 88
Cdd:PRK12665   3 VLAPLPVLLPLLAAALTLVLGRRPRAQRAISLLALSAVLVLSAVLLYLVDRDGTQAVQLGGWDAPIGITLVVDRLSALML 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  89 TVSQLVLFAVMWFGIGQGISDGDEDEPISVFVPTYMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVLLTLGASSSRTRA 168
Cdd:PRK12665  83 VVSSVVLLAVLVYAIGQGIRDGDEEQPVSIFLPTYLILVAGVSNAFLAGDLFNLYVGFEILLVASYVLLTLGATAARVRA 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 169 GVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHISLRMEDIPDGTRTAIFAVLLVAFAVKAAVFPLSAWLPDSYPTAPSM 248
Cdd:PRK12665 163 GVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELPSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAP 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 249 VTAVFAGLLTKVGVYAIIRTRSVVFPDGRLDDVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTL 328
Cdd:PRK12665 243 VTAVFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVA 322
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 329 GLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAGAQ 408
Cdd:PRK12665 323 GLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEAGAE 402
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 409 NGSATAWILVAGSIITSLLTLYTMILVWSKAFWRDRSDAPEGDTVLAQPAALRERTQMVAIAERDDVGKMPLGMVMPTAL 488
Cdd:PRK12665 403 DGTWLAWALVAGGVVTSLLTLYAVARVWTKAFWRAREDAPEGHLADARPAPLLDDSDDIEFADRDDVGRMPRGMVGATAA 482
                        490       500       510
                 ....*....|....*....|....*....|....*...
gi 740841431 489 LVIASVGVTVLAGPLSNVATEAASNVANVDEYRAAVLG 526
Cdd:PRK12665 483 LVAVGLALTVFAGPLFAISDRAATELLDRSIYITAVLG 520
HyfB COG0651
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ...
10-439 1.07e-136

Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];


Pssm-ID: 440416 [Multi-domain]  Cd Length: 430  Bit Score: 403.76  E-value: 1.07e-136
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  10 LIPLPIIVPAATAAIALLLARFPKAQQAIALFSLGSLLGVASALVYLIYAHGVHTVQVGGWDAPIGITLVADNLAVLMIT 89
Cdd:COG0651    4 LLILPVLLPLLAAALLLLLGRRRRLQRALSLLASLALLALALALLLQVLAGGPLVYALGGWPAPFGIVLVADRLSALFLL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  90 VSQLVLFAVMWFGIGqgisDGDEDEPISVFVPTYMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVLLTLGASSSRTRAG 169
Cdd:COG0651   84 LTALVALAVLLYSIG----YMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 170 VSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHISLRMEDIPDGTRTAIFAVLLVAFAVKAAVFPLSAWLPDSYPTAPSMV 249
Cdd:COG0651  160 LKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPV 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 250 TAVFAGLLTKVGVYAIIRTRSVVFPD---GRLDDVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGN 326
Cdd:COG0651  240 SALLSGLLTKVGVYAILRVLTLLFGAdpaLFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGT 319
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 327 TLGLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAG 406
Cdd:COG0651  320 PLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAA 399
                        410       420       430
                 ....*....|....*....|....*....|...
gi 740841431 407 AQNGsatAWILVAGSIITSLLTLYTMILVWSKA 439
Cdd:COG0651  400 LEAG---AWLLAAVLLLSSLLTLAYFVRIFGRA 429
PRK12663 PRK12663
Na+/H+ antiporter subunit D;
10-526 2.96e-121

Na+/H+ antiporter subunit D;


Pssm-ID: 237163 [Multi-domain]  Cd Length: 497  Bit Score: 366.58  E-value: 2.96e-121
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  10 LIPLPIIVPAATAAIALLLARFPKAQQAIALFSLGSLLGVASALVYLIYAHGVHTVQVGGWDAPIGITLVADNLAVLMIT 89
Cdd:PRK12663   5 LLILPMLLPLLCGLVLVFLRNRDRLQRYLAIGTLTILTLISLALLIYVQRHGPITLDFGGWLPPFGIQFTGDSLSALMVT 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  90 VSQLVLFAVMWFGIGqgisDGDEDEPISVFVPTYMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVLLTLGASSSRTRAG 169
Cdd:PRK12663  85 TASFVATAIMAYGFG----DIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQEREQLRGA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 170 VSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHISLRMEDIPD-GTRTAIFAVLLVAFAVKAAVFPLSaWLPDSYPTAPSM 248
Cdd:PRK12663 161 IKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDtATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTE 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 249 VTAVFAGLLTKVGVYAIIRTRSVVFPDGR--LDDVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGN 326
Cdd:PRK12663 240 VAALFAALLTKVGIYALIRVFTLLFPQERelLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGT 319
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 327 TLGLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAG 406
Cdd:PRK12663 320 PAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGA 399
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 407 AQNGsatAWILVAGSIITSLLTLYTMILVWSKAFWRDRsdapegdtvlaqpaalrertqmvaIAERDDVGKMPLGMVMPT 486
Cdd:PRK12663 400 LDNG---AYILLALMLITSLITMYSLFRIFFLAYWGDK------------------------DGEEVNFKPIPLYRKLPL 452
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|
gi 740841431 487 ALLVIASVGVTVLAGPLSNVATEAASNVANVDEYRAAVLG 526
Cdd:PRK12663 453 SILAVVVIAMGIAAEPLLNLTQDAAEGLLDPQAYIKSVFP 492
PRK07691 PRK07691
putative monovalent cation/H+ antiporter subunit D; Reviewed
10-526 3.10e-114

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 181085 [Multi-domain]  Cd Length: 496  Bit Score: 348.48  E-value: 3.10e-114
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  10 LIPLPIIVPAATAAIALLLARFPKAQQAIALFSLGSLLGVASALVYLIYAHGVHTVQVGGWDAPIGITLVADNLAVLMIT 89
Cdd:PRK07691   5 LVILPILIPVITAILLIFLGKRPIIQRYVALIGSLLTLVAAIILVANVYKHGIQTLELGNWKAPFGIVFVADMFAALLVL 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  90 VSQLVLFAVMWFGIgQGISdgdEDEPISVFVPTYMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVLLTLGASSSRTRAG 169
Cdd:PRK07691  85 TSSIITFLVILYSF-QTIG---IERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQLRES 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 170 VSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHISLRMEDIPD---GTRTAIFAVLLVAFAVKAAVFPLSAWLPDSYPTAP 246
Cdd:PRK07691 161 IKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAgqtGLITVVAILFLFVFATKAGLFPLYFWLPGSYYAPP 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 247 SMVTAVFAGLLTKVGVYAIIRTRSVVFPD--GRLDDVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAV 324
Cdd:PRK07691 241 IAIAALFGALLTKVGVYAIARTFTLFFSHdtSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAM 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 325 GNTLGLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIE 404
Cdd:PRK07691 321 MTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVE 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 405 AGAQNGSATAWILVagsIITSLLTLYTMILVWSKAFWRDRSDAPEGDTVLAQpaalrertqmvaiaerddvgkmplGMVM 484
Cdd:PRK07691 401 GTFEAGFYVSGIIV---LLSSLLVLYSVIKIFLKGFWGEPKGYDLNNKVPVK------------------------KLLL 453
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|..
gi 740841431 485 PTALLVIASVGVTVLAGPLSNVATEAASNVANVDEYRAAVLG 526
Cdd:PRK07691 454 PAVVLVAITILYGLGAEPLYPYVKQAAETLYDPSTYIEAVLK 495
PRK08375 PRK08375
putative monovalent cation/H+ antiporter subunit D; Reviewed
9-521 2.55e-99

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236251 [Multi-domain]  Cd Length: 487  Bit Score: 309.89  E-value: 2.55e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431   9 ALIPLPIIVPAATAAIALLLARFPKAQQAIALFSLGSLLGVASALVYLIYAHGVHTVQVGGWDAPIGITLVADNLAVLMI 88
Cdd:PRK08375   4 HLLPLLVAVPLLAAALIVLLPKRRRLRWALALLVAALTFALAISLLPQVLDGGVIAYVVGGWPPGIGIELRADSLSALFL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  89 TVSQLVLFAVMWFGIGQGisdgdedEPISVFVPT-YMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVLLTLGASSSRTR 167
Cdd:PRK08375  84 LVTSILAIAALLYAIGYG-------EHRQTRFYAlFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRRALA 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 168 AGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHISLRMEdiPDGTRTAIFAVLLVAFAVKAAVFPLSAWLPDSYPTAPS 247
Cdd:PRK08375 157 AARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA--ENPTVVTAFGFVLLALALKAAVFPLHTWLPRAYPAAPP 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 248 MVTAVFAGLLTKVGVYAIIRTRSVVFP-----DGRLDDVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGI 322
Cdd:PRK08375 235 VVTALLSGLVTKVAVYALIRIYFTVFGgdfrfALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGL 314
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 323 AVGNTLGLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVML 402
Cdd:PRK08375 315 ALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYL 394
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 403 IEAGAQNGSataWILVAGSIITSLLTLYTMILVWSKAFWRdrsDAPEGDTVLAQPAalrertqmvaiaerddvgkmPLGM 482
Cdd:PRK08375 395 VVGAVEAGQ---WLVLAVLLASSLLALLYFLRIWYRAFFG---PPPPGSEAPKQEA--------------------PLGM 448
                        490       500       510
                 ....*....|....*....|....*....|....*....
gi 740841431 483 VMPTALLVIASVGVTVLAGPLSNVATEAASNVANVDEYR 521
Cdd:PRK08375 449 LAPSLALALLSLLLGIYAGPLLQLADAAAAGLLGTSAYV 487
PRK12666 PRK12666
putative monovalent cation/H+ antiporter subunit D; Reviewed
10-526 3.82e-96

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237166 [Multi-domain]  Cd Length: 528  Bit Score: 302.92  E-value: 3.82e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  10 LIPLPIIVPAATAAIALLLA-RFPKAQQAIALFSLGSLLGVASALVYLIYAHGVHTVQVGGWDAPIGITLVADNLAVLMI 88
Cdd:PRK12666   7 LIILPILLPLLTAALLLLLDeRRRRLKRAISLASTLLLLAVAVALLASAAAGGIGVYLLGNWPAPFGIVLVLDRLSALML 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  89 TVSQLVLFAVMWFGIGQgisdgdEDEPISVFVPTYMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVLLTLGASSSRTRA 168
Cdd:PRK12666  87 LLTALLALAALLYALAG------WDRAGPHFHALFQFQLMGLNGAFLTGDLFNLFVFFEVLLAASYGLLLHGSGRARVRA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 169 GVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHISLRMEDIPDGTRT---AIFAVLLVAFAVKAAVFPLSAWLPDSYPTA 245
Cdd:PRK12666 161 GLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQLPAADRAlleAGAALLLVVFLIKAAMWPLNFWLPPAYAAA 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 246 PSMVTAVFAgLLTKVGVYAIIRTRSVVFPD------GRLDDVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMI 319
Cdd:PRK12666 241 SAPVAALFA-IMTKVGIYAILRLSTLLFGPeagasaGFGQDWLLPGGLATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLL 319
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 320 FGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLIERQ-----------------AGSSSLRSLGSLAKTSPLLALLYLV 382
Cdd:PRK12666 320 AAIGLGNPAATAAALYYLVHSTLAAAALFLLADLVERQrgaaadrlavtpelydlDEEEEEEVGVAIPATMALLGLLFFI 399
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 383 PALNLGGIPPFSGFLGKVMLIEA-GAQNGSATAWILVAGSIITSLLTLYTMILVWSKAFWRdrsdapegdtvlaqpaalr 461
Cdd:PRK12666 400 CALALAGLPPLSGFLGKFALLQAlLNPPGAGAAWWLWALVLLSGLAALIALTRAGIRLFWA------------------- 460
                        490       500       510       520       530       540
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 740841431 462 ertqmvaiAERDDVGKMPLGMVMPTALLVIASVGVTVLAGPLSNVATEAASNVANVDEYRAAVLG 526
Cdd:PRK12666 461 --------SHERPVPRLRVLELAPVAGLLALCVALTVFAGPVMRYTQATAAQLHDPAAYIRAVLA 517
PRK12667 PRK12667
putative monovalent cation/H+ antiporter subunit D; Reviewed
7-525 2.31e-70

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237167 [Multi-domain]  Cd Length: 520  Bit Score: 235.25  E-value: 2.31e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431   7 ILALIP-LPIIVPAATAAIALLLARFPKAQQAIALfsLGSLLGVASALVYLIYAHGVHTVQV---GGWDAPIGITLVADN 82
Cdd:PRK12667   5 IVGLTPiLLVLFAFLLPLLSILLKGNRKIQKIYAL--LVSLITLILSILLFIQVYSSNKPIVylfGGWPAPIGIVYEVDL 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  83 LAVLMITVSQLVLFAVMWFGIGQGisdGDEDEPISVFVpTYMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVLLTLGAS 162
Cdd:PRK12667  83 LGALLGLLTALVMFLILIYSYWYL---EHESGPEWYYT-LLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 163 SSRT-RAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHISLR---------MEDIPDGTRTAIFAVLL--VAFAVKAA 230
Cdd:PRK12667 159 RGDAvEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKirglsfpltGGLAGNPPLALGVALALalWAFTIKAA 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 231 VFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRTRSVVFPDGR--------LDDVLMWAGLATMLMGILGAMAQND 302
Cdd:PRK12667 239 IFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPslidfraaLSPILIILGAVSAIIGALMMVVQKD 318
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 303 IKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLLALLYLV 382
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLI 398
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 383 PALNLGGIPPFSGFLGKVMLIEAGAQNGSATAWILVagsIITSLLTLYTMILVWSKAFWRDRSDAPEGDTVLAqpaalre 462
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVL---LIASAISLVGYFRAWYSLFFGKPKSGEEVEHKES------- 468
                        490       500       510       520       530       540
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 740841431 463 rtqmvaiaerddvgkmpLGMVMPTALLVIASVGVTVLA----GPLSNVATEAASNVANVDEYRAAVL 525
Cdd:PRK12667 469 -----------------PSMSVVILVLALAVLILGILAlflpEILDSLIEPAANQAMDPQKYIDAAL 518
NuoM COG1008
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ...
37-432 5.40e-57

NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440632 [Multi-domain]  Cd Length: 488  Bit Score: 198.38  E-value: 5.40e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  37 AIALFSLGSLLGVASALVYLIYAHGVHTVQVGGWDAPIGIT--LVADNLAVLMITVSQLVLFAVMWFgigqgiSDGDEDE 114
Cdd:COG1008   35 ALAVSLLTLLLSLYLLAGFDPGTGGFQFVESYPWIPSLGISyhLGVDGISLPLVLLTALLTPLAILA------SWNEIKK 108
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 115 PISVFVPTYMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVLLTLGASSSRTRAGVSYVMVNMLSSMVFLLAIGLVYQAV 194
Cdd:COG1008  109 RPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLA 188
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 195 GTVNFAHISLRMEDIPDGTRTAIFAVLLVAFAVKAAVFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRTRSVVFP 274
Cdd:COG1008  189 GALTFDIAELAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFP 268
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 275 DG--RLDDVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVG 352
Cdd:COG1008  269 EAsaYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVG 348
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 353 LIERQAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAGAQNGSATAWILVAGSIITSLLTLYTM 432
Cdd:COG1008  349 VLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
136-422 4.97e-50

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 174.42  E-value: 4.97e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  136 AGDLFNMYVGFEVLLVASYVLLTL-GASSSRTRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHISLRMEDIPDG-T 213
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIGYwGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSsG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  214 RTAIFAVLLVAFAVKAAVFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRTRSVVFPD-GRLDDVLMWAGLATMLM 292
Cdd:pfam00361  81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSsPFIQQILLILAIISMLL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  293 GILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLIE-RQAGSSSLRSLGSLAK 371
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSVIyRRVHTRNIRDYGGLAK 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 740841431  372 TSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAGAQNGSATAWILVAGSI 422
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
PRK08376 PRK08376
putative monovalent cation/H+ antiporter subunit D; Reviewed
6-526 7.39e-50

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236252 [Multi-domain]  Cd Length: 521  Bit Score: 179.91  E-value: 7.39e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431   6 LILALIPLPIIVPAATAAIALLLARF-PKAQQAIALFSLGSLLGVASALVYLIYAHGV-----------HTVQVGGWDAP 73
Cdd:PRK08376   2 LGEHLPPLLIIIPLFGAFSMPIVSLLgGKAREIWAVLISFLTLIVALLVFYEVWNNGTivyvlgaesptLTLPFGSGGFP 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  74 IGITLVADNLAVLMITVSQLVLFAVMWFGIgqgiSDGDEDEPISVFVPTYMLLNMGVSMAFLAGDLFNMYVGFEVLLVAS 153
Cdd:PRK08376  82 IRIIWEVDLFGAFMALIATIVSFLAVLYSI----SYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIAS 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 154 YVLLTLGASSSR-TRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHISLRMEDIPDGTRTAIFAVLLVAFAVKAAVF 232
Cdd:PRK08376 158 YALVAFRNDTWEaIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENPTVVAKIALALFIAGLAMKSGAV 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 233 PLSAWLPDSYPTAPSMVTAVFAgLLTKVGVYAIIRTRSVVFPD----GRLDDVLMWAGLATMLMGILGAMAQNDIKRLLS 308
Cdd:PRK08376 238 PVHMWLPDAYPAAPSSISAMLL-VIKQAGLYALARVLFSIYGPainlATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLA 316
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 309 FTLVSHIGYMIFGIAVGNT------------LGLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLL 376
Cdd:PRK08376 317 YHSVSQIGYMLLGLGVGLAalgdpamasygeIALAGGIYHIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKT 396
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 377 ALLYLVPALNLGGIPPFSGFLGKVMLIEAGAQNGSatawILVAGSIITSLLTLYTMILVWSKAFWRDRSdapegdtvlaq 456
Cdd:PRK08376 397 TIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNP----ILGVIAMIGSVLTLASFVKVFHTAFFGPPS----------- 461
                        490       500       510       520       530       540       550
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 740841431 457 paalrertqmvaiAERDDVGKMPLGMVMPTALLVIASVGVTVLAGPLSN-VATEAASNVANVDEYRAAVLG 526
Cdd:PRK08376 462 -------------EKVMNVKEPPKPMLVPMLILAIAIIGMGLFPWQISDkLMAPAAKALEDQGGYISAVLG 519
PRK08377 PRK08377
NADH dehydrogenase subunit N; Validated
48-423 5.00e-49

NADH dehydrogenase subunit N; Validated


Pssm-ID: 181406 [Multi-domain]  Cd Length: 494  Bit Score: 177.27  E-value: 5.00e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  48 GVASALVYLIYAHGVHT-VQVGGWDAPIGITLVADNLAVLMITVSQLVLFAVMWFGIgqgisDGDEDEPISVFVPTYMLL 126
Cdd:PRK08377  43 GIAGWVFMEVYTTGKPIiIMAGGWKPPVGINLYIGPFAALFVLIIAIVSFIMSIFSL-----KAVEVEPIDKYAMLFLLL 117
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 127 NMGVSMAFLAGDLFNMYVGFEVLLVASYVLLTLGASSSRTRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHISLRM 206
Cdd:PRK08377 118 MLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLA 197
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 207 EDIPDGTRTAIFAVLLVAFAVKAAVFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRTRSVVFPDGRLDDVL---M 283
Cdd:PRK08377 198 GTIDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLklvI 277
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 284 WAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSL 363
Cdd:PRK08377 278 IMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEI 357
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 364 RSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAGAQNGSATAWILVAGSII 423
Cdd:PRK08377 358 EKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASV 417
NDH_I_M TIGR01972
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ...
70-429 2.66e-47

proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273903 [Multi-domain]  Cd Length: 481  Bit Score: 172.05  E-value: 2.66e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431   70 WDAPIGIT--LVADNLAVLMITVSQLVLFAVMWFgigqgiSDGDEDEPISVFVPTYMLLNMGVSMAFLAGDLFNMYVGFE 147
Cdd:TIGR01972  63 WIPALGISyhLGVDGISLLLVLLTALLTLLAILA------SWESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWE 136
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  148 VLLVASYVLLTLGASSSRTRAGVSYVMVNMLSSMVFLLA-IGLVYQAVGTVNFAHISLRmeDIPDGTRTAIFAVLLVAFA 226
Cdd:TIGR01972 137 AMLIPMYLLIGVWGGPNRIYAAMKFFLYTLAGSLLMLLAiLGLYFLGGGTFDLLELLNL--PLPFGVQTWLFLAFFIAFA 214
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  227 VKAAVFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRTRSVVFPDGRLD--DVLMWAGLATMLMGILGAMAQNDIK 304
Cdd:TIGR01972 215 VKVPLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYfaPVLAALGVIAIIYGALIALAQTDIK 294
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  305 RLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLLALLYLVPA 384
Cdd:TIGR01972 295 RLIAYSSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFA 374
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 740841431  385 LNLGGIPPFSGFLGKVMLIEAGAQNGSATAWILVAGSIITSLLTL 429
Cdd:TIGR01972 375 MASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYML 419
PRK12662 PRK12662
putative monovalent cation/H+ antiporter subunit D; Reviewed
6-460 5.54e-45

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 183662 [Multi-domain]  Cd Length: 492  Bit Score: 166.06  E-value: 5.54e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431   6 LILALIPLPIIVPAATAAIALLLaRFPKAQQAIALFSLGSLLGVASALVYLIYAHGVHTVQVGGWDAPIGITLVADNLAV 85
Cdd:PRK12662   1 MKSHLPILQVIIPLLSAVVCALL-KNRKLVKIISCIVVAVSFFIALVLFVQVYSGGVIKYSLGGWGPPYGIELRVDILSA 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  86 LMITVSQLVLFAVMWFGIGQGISDGDEDEpISVFVPTYMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVLLTLGASSSR 165
Cdd:PRK12662  80 TMLVLVNFIAVMSVLYGIYPNRKEISVNK-IPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKKA 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 166 TRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHISLRMEDIPDgTRTAIFAVL--LVAFAVKAAVFPLSAWLPDSYP 243
Cdd:PRK12662 159 LVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPT-NRAIQIGVLfiMVGLFIKAALFPFHKWLIQAYS 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 244 TAPSMVTAVFAGLLTKVGVYAIIRT------RSVVFPDGRLDDVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGY 317
Cdd:PRK12662 238 EAPSFISVFFSGTSTKVMIYLIIRIvydvfkANFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGY 317
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 318 MIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFL 397
Cdd:PRK12662 318 IILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFV 397
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 740841431 398 GKVMLIEAGAqngSATAWI-LVAGSIITSLLTLYTMILVWSKAFWRDRSDAPEGDTVLAQPAAL 460
Cdd:PRK12662 398 AKWYILDAFI---KSNAWIgLVVLLVGSGLSVIYVWKIVEALYFESRMVESKANDKAFKTPNAM 458
PRK05846 PRK05846
NADH:ubiquinone oxidoreductase subunit M; Reviewed
2-432 6.94e-45

NADH:ubiquinone oxidoreductase subunit M; Reviewed


Pssm-ID: 235622 [Multi-domain]  Cd Length: 497  Bit Score: 165.76  E-value: 6.94e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431   2 TTEQLILALIPLPIIVPAATAAIALLLARFPKAqqaIALfsLGSLLGVASALVYLI----YAHGVHTVQVGGWDAPIGIT 77
Cdd:PRK05846   1 MNWPLLSLLIFLPLIGGLLVLLTERFGARLARW---IAL--IGTLLTLLLSLVLWIgfdsSNAGFQFVEKHPWIPRFGIS 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  78 --LVADNLAVLMITVSQ-LVLFAVM--WFGIgqgisdgdeDEPISVFVPTYMLLNMGVSMAFLAGDLFNMYVGFEVLLVA 152
Cdd:PRK05846  76 yhLGVDGISLLLVVLTAlLTPLAVLasWEEI---------KKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIP 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 153 SYVLLTLGASSSRTRAGVSYVMVNMLSSMVFLLAI-GLVYQ-AVGTVNFAHISLRMEDIPDGTRTAIFAVLLVAFAVKAA 230
Cdd:PRK05846 147 MYFLIGVWGGKNRIYAATKFFLYTLLGSLLMLVAIiYLVVVyYNATGTFDIADLLNLPLPPGVQYWLFLAFFIAFAVKMP 226
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 231 VFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRTRSVVFPDGRLD--DVLMWAGLATMLMGILGAMAQNDIKRLLS 308
Cdd:PRK05846 227 MFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEfaPIIITLGVIAIIYGALVALAQTDIKKLIA 306
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 309 FTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLLALLYLVPALNLG 388
Cdd:PRK05846 307 YSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASL 386
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....
gi 740841431 389 GIPPFSGFLGKVMLIEAGAQNGSATAWILVAGSIITSLLTLYTM 432
Cdd:PRK05846 387 GLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLY 430
NuoN COG1007
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ...
40-511 5.18e-44

NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440631 [Multi-domain]  Cd Length: 473  Bit Score: 162.98  E-value: 5.18e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  40 LFSLGSLLGVASALVYLIYAHGVHTVQVggwdapIGITLVADNLAVLMITVSQLVLFAVMWFGIGqgiSDGDEDEPISVF 119
Cdd:COG1007   34 LLAGLALLGLLLALALLLLALGGGTGTA------FGGMFVVDGFALFFKLLILLAALLVLLLSRD---YLERRGLLRGEF 104
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 120 VPTYMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVLLTLGASSSR-TRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVN 198
Cdd:COG1007  105 YALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRsSEAALKYFLLGALSSGFLLYGISLLYGATGSLN 184
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 199 FAHISLRMEDIPDGTRTAIFAV--LLVAFAVKAAVFPLSAWLPDSYPTAPSMVTAVFAGLlTKVGVYAI-IRTRSVVFPD 275
Cdd:COG1007  185 LAGIAAALAAGGANSPLLLLGLvlVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATA-PKIAAFAAlLRLLVEAFPG 263
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 276 GRLDDVLMWAGLA--TMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGL 353
Cdd:COG1007  264 LAADWQLLLAVLAvlSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFAVILL 343
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 354 IERQAGSSSLRSLGS-LAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAGAQNGsatAWILVAGSIITSLLTLYTM 432
Cdd:COG1007  344 LSRKGGEAEEIEDLAgLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAG---LYWLAVIAVLNSVISAYYY 420
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 740841431 433 ILVwSKAFWRdrsDAPEGDTVLAQPAALRertqmVAIaerddvgkmplgmvmptALLVIASVGVTVLAGPLSNVATEAA 511
Cdd:COG1007  421 LRV-VKAMYF---DEPEEEAPISAPPGLR-----VAL-----------------VIAALLVLLLGIFPGPLLDLAAAAA 473
PRK08668 PRK08668
NADH dehydrogenase subunit M; Validated
76-423 5.09e-42

NADH dehydrogenase subunit M; Validated


Pssm-ID: 236332 [Multi-domain]  Cd Length: 610  Bit Score: 159.78  E-value: 5.09e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  76 ITLVADNLAVLMITVSQLVLFAVMWFGIGQGISDgdeDEPISVFvptYMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYV 155
Cdd:PRK08668  63 LTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKN---DAYFNMF---ALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFM 136
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 156 LLTLGASSSRtRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHISLRMEDIPDGTRTAIFAVLLVAFAV-KAAVFPL 234
Cdd:PRK08668 137 MVPMGKKESR-KASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQGLINDTSTGFALIVFLFLLAFGVaKAGIFPL 215
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 235 SAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIrTRSVVFPDGRL-------------DDVLMWAGLATMLMGILGAMAQN 301
Cdd:PRK08668 216 HVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFL-LVLYVLPGTKLfsefgtyrgvplfNYILAWLGNISIIVGTLMAILQE 294
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 302 DIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLLALLYL 381
Cdd:PRK08668 295 DIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMGGLIEKMPFTFAMYL 374
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|...
gi 740841431 382 VPALNLGGIPPFSGFLGKVMLIEAGAQNG-SATAWILVAGSII 423
Cdd:PRK08668 375 VAIISLAGIPPMSGFASKWLIFEALISKGmPITAFMAFFGSIG 417
PRK05777 PRK05777
NADH-quinone oxidoreductase subunit NuoN;
1-430 2.11e-40

NADH-quinone oxidoreductase subunit NuoN;


Pssm-ID: 235603 [Multi-domain]  Cd Length: 476  Bit Score: 153.05  E-value: 2.11e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431   1 MTTEQLILALIpLPIIVPAATAAIALLLARFPKAQQAIALFSLGSLLGVASALVYLIYAHGVHTVQVGgwdapigiTLVA 80
Cdd:PRK05777   1 MTITSLNLILL-LPELILLGAAVVLLLIDAFVRRHSRRATLAVLALLLALVALLFVLGAAGGGTAFGG--------MLVV 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  81 DNLAVLMITVSQLVLFAVMWFGIGQGisdgdEDEPISVFVPTYMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVLLTLG 160
Cdd:PRK05777  72 DGFALFLKGLILLASLLALLLARPYL-----EDRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALR 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 161 ASSSR-TRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHISLRMEDIPDGTRTAIFAV--LLVAFAVKAAVFPLSAW 237
Cdd:PRK05777 147 RDRRRsLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKALADGSGNSLLLLFGLvfLLVGLAFKLSAVPFHMW 226
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 238 LPDSYPTAPSMVTAVFAGLlTKVGVYAII-RTRSVVFPDGRLD--DVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSH 314
Cdd:PRK05777 227 TPDVYEGAPTPVTAFLATA-PKIAAFAVLlRLLVVAFGGLSEDwqQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAH 305
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 315 IGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGS-LAKTSPLLALLYLVPALNLGGIPPF 393
Cdd:PRK05777 306 AGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAgLSKRSPLLAAVMTIFMLSLAGIPPT 385
                        410       420       430
                 ....*....|....*....|....*....|....*..
gi 740841431 394 SGFLGKVMLIEAGAQNGsatAWILVAGSIITSLLTLY 430
Cdd:PRK05777 386 AGFWGKFYVFEAAVEAG---LWWLAVIGVLNSAIGAF 419
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
32-503 4.62e-40

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 154.15  E-value: 4.62e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  32 PKAQQAIALFSLGSLLGVASALVYLIYAHGVHT-----VQVGGWDAPIGITLvaDNLAVLMITVSQLVLFAVMWFGIGQG 106
Cdd:COG1009   27 RRAAGWLAALAPLAAFVLSLLLFPAVLGGEVVVelytwIPVGSLGLDFGFRL--DGLSLLMLLLVTGVGLLVHIYSIGYM 104
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 107 isdgDEDEPISVFVpTYMLLNMGvSMAFL--AGDLFNMYVGFEVLLVASYVLLtlGASSSRTRAGVSYVM---VNMLSSM 181
Cdd:COG1009  105 ----SGDPGLARFF-AYLLLFMA-AMLGLvlSDNLLLLFVFWELVGLCSYLLI--GFWYEKPSARRAARKaflVTRVGDL 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 182 VFLLAIGLVYQAVGTVNFAHISLRMEDIPDGTRTAIFAVLLVAFAV-KAAVFPLSAWLPDSY--PTAPS-------MVTA 251
Cdd:COG1009  177 GLLLGILLLGAIAGTLNFSELLAAAPTILSSPLLTLILLLLLLGAFgKSAQFPLHFWLPDAMegPTPVSallhaatMVKA 256
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 252 vfaglltkvGVYAIIRTrSVVF---PDGRLddVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGntl 328
Cdd:COG1009  257 ---------GVYLLARL-SPLFalsPVWLT--VVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG--- 321
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 329 GLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAGAQ 408
Cdd:COG1009  322 AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALE 401
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 409 NGSAtAWILVAGSIITSLLTLYTMILVWSKAFWRDRSDAPEgdtvlaqpaalrertqmvaiaerDDVGKMPLGMVMPTAL 488
Cdd:COG1009  402 AGGL-GPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTP-----------------------KHPHESPWLMTLPLVV 457
                        490
                 ....*....|....*
gi 740841431 489 LVIASVGVTVLAGPL 503
Cdd:COG1009  458 LAVLSLVLGLLLPGL 472
PRK12668 PRK12668
Na(+)/H(+) antiporter subunit D;
133-417 7.76e-39

Na(+)/H(+) antiporter subunit D;


Pssm-ID: 237168 [Multi-domain]  Cd Length: 581  Bit Score: 150.04  E-value: 7.76e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 133 AFLAGDLFNMYVGFEVLLVASYVLLTLGASSSRTRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHIslrmedipdG 212
Cdd:PRK12668 109 AVFAGDLLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAI---------A 179
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 213 TRTAIFAVL-LVAFAVKAAVFPLSAWLPDSYPtAPSMVTAVF-AGLLTKVGVYAIIRtrsvVFPDGrldDVLMWAGLATM 290
Cdd:PRK12668 180 GLGGTAAWLiLIGFGVNAAFPPLHAWLPDAYP-EATVTGSVFlSAFTTKTAVYALAR----AFPGT---ELLIYIGAAMA 251
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 291 LMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGSLA 370
Cdd:PRK12668 252 VYGVFFALLENDLRRLLSYHIVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLFMSAGAVLYRTGTEKLTELGGLY 331
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 740841431 371 KTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAGAQNGSATAWIL 417
Cdd:PRK12668 332 RSMPLTALFCLVGALSISAFPLFSGFVSKSMIISAAGEDHYVWVWLL 378
NDH_I_N TIGR01770
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ...
136-430 1.90e-34

proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]


Pssm-ID: 273795 [Multi-domain]  Cd Length: 468  Bit Score: 135.85  E-value: 1.90e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  136 AGDLFNMYVGFEVLLVASYVLLTLGASSSR-TRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHISLRMEDIPDGTR 214
Cdd:TIGR01770 121 SNDLLSIYLGLELQSLCFYVLAGLKRKSRFsTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNGMLNIS 200
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  215 TAIFAVLL--VAFAVKAAVFPLSAWLPDSYPTAPSMVTAVFAgLLTKVGVYAIIRTRSVVFPDGR---LDDVLMWAGLAT 289
Cdd:TIGR01770 201 LLLLGIVLilVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFS-IVPKIAIFAVFLRLFLYILFGFseaWQIFLAIIAFLS 279
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  290 MLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSL--G 367
Cdd:TIGR01770 280 MLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFGVLSLLRSYKDEWIEYISdfA 359
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 740841431  368 SLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAGAQNGsatAWILVAGSIITSLLTLY 430
Cdd:TIGR01770 360 GLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSG---LYWLAVIAVLTSVIGAF 419
PRK08667 PRK08667
hydrogenase membrane subunit; Validated
74-507 1.25e-33

hydrogenase membrane subunit; Validated


Pssm-ID: 236331 [Multi-domain]  Cd Length: 644  Bit Score: 135.63  E-value: 1.25e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  74 IGITLVADNLAVLMITVSQLVLFAVMWFGIG--QGISDGDEDEPISVFVPTYMLLNMGVSMAflaGDLFNMYVGFEVLLV 151
Cdd:PRK08667  69 LDITFHIDRLAAFFIILIGLVSLCVAIYSLGynEHMSSNERANLLSALTALFILSMLGVVAS---ANTFSFLFFWEIMAL 145
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 152 ASYVLLTLGASSSRT-RAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHISlrmedIPDGTRTAIFAVLLVAFAVKAA 230
Cdd:PRK08667 146 SSFFLVMNDYQEEETqRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLG-----ASAGILSLVFLLLFLGFGIKAG 220
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 231 VFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIR-TRSVVFPDGRLDDVLMWAGLATMLMGILGAMAQNDIKRLLSF 309
Cdd:PRK08667 221 IIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRfLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAY 300
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 310 TLVSHIG--------YMIFGIAVGNTLG---LGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLLAL 378
Cdd:PRK08667 301 SSIENIGiilmgiglYVIFGVYGLDTLAllaLGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSA 380
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 379 LYLVPALNLGGIPPFSGFLGKVMLIEAGAQNGSatawilVAGSIITSLLTLYTMILVWSKAFWRDRSDAPEGDTVLAQPa 458
Cdd:PRK08667 381 LFLVGAVSIAALPPFNGFASELLLYESFFQSFS------VADPLIKILLFSVLAIFALTSALAAACFVKAFGITFLAMP- 453
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*....
gi 740841431 459 alreRTQMVAIAErddvgKMPLGMVMPTALLVIASVGVTVLAGPLSNVA 507
Cdd:PRK08667 454 ----RSQEARSAK-----EVSKPMLIGPAVLAVACLVLGLFSVQIFSLA 493
PRK06521 PRK06521
hydrogenase 4 subunit B; Validated
43-509 2.34e-33

hydrogenase 4 subunit B; Validated


Pssm-ID: 235820 [Multi-domain]  Cd Length: 667  Bit Score: 135.02  E-value: 2.34e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  43 LGSLLGVASALVYLIYAHGVHTVQVGGWDApIGITLVADNLAVLMITVSQLVLFAVMWFGIGQGisDGDEDEPISVFVPT 122
Cdd:PRK06521  42 LGGLLGLASGLTALFAGPTLAAVLPLGLPF-LPFHLRLDALSAFFLLVISLLGAAASLYSLGYF--REYEGKGPGAMGFF 118
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 123 YMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVL-LTLGASSSRTRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAh 201
Cdd:PRK06521 119 YNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLvIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFA- 197
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 202 iSLRMEDIPDGTRTAIFAVLLVAFAVKAAVFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRtrsVVF-----PDG 276
Cdd:PRK06521 198 -AMRAAHLSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILR---VVFdllgaPGW 273
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 277 RLDDVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVG-----------NTLGLGGAIFYIVHHILVQT 345
Cdd:PRK06521 274 WWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGLAmvfiaygmpllAALALTAALYHLLNHALFKS 353
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 346 ALFLVVGLIERQAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAGAQNGSATAWIL-----VAG 420
Cdd:PRK06521 354 LLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLSSPGLPQWGLklavpIAA 433
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 421 SII--TSLLTLYTMIlvwsKAFwrdrsdapeGDTVLAQPaalRErtqMVAIAERDDVGKMPLGMVMPTALLVIASVGVTV 498
Cdd:PRK06521 434 AMLalTAALAAMCFV----KFY---------GITFLGRP---RS---EKAEEAHEVPRWMRAAMLLLAALCVLLGLLPGW 494
                        490
                 ....*....|.
gi 740841431 499 LAGPLSNVATE 509
Cdd:PRK06521 495 VAPVIDPVAQA 505
PRK07234 PRK07234
putative monovalent cation/H+ antiporter subunit D; Reviewed
74-407 5.38e-33

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235978 [Multi-domain]  Cd Length: 470  Bit Score: 131.61  E-value: 5.38e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  74 IGITLVADNLAVLMITVSQLVLFAVMWFGIgqgisdgdeDEPISVFVPTYMLLNMG-VSMAFLAGDLFNMYVGFEVLLVA 152
Cdd:PRK07234  59 FGVTLRADALSGYFILTNALVTLAVIFYCW---------ESAKTRFFYAQLLILHGsVNAAFVCADLISLYVALEVLSIA 129
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 153 SYVLLTLGASSSRTRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHISlrmedipdGTRTAIFAVLLVAFAVKAAVF 232
Cdd:PRK07234 130 TFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLA--------TADPEAFALIALGLLVKGGIF 201
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 233 PLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRTRSVVFpdgRLDDVLMWAGLATMLMGILGAMAQNDIKRLLSFTLV 312
Cdd:PRK07234 202 VSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVP---GLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTI 278
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 313 SHIGYMIFGIAVGNtlglggaiFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLlallyLVPALNLGGIPP 392
Cdd:PRK07234 279 SQLGFILAAPLVGG--------LYALAHGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIPL-----TMASFSIAGFPL 345
                        330
                 ....*....|....*
gi 740841431 393 FSGFLGKVMLIEAGA 407
Cdd:PRK07234 346 LAGFVSKVLTLKNLL 360
PRK06525 PRK06525
hydrogenase 4 subunit D; Validated
32-419 3.92e-32

hydrogenase 4 subunit D; Validated


Pssm-ID: 180606 [Multi-domain]  Cd Length: 479  Bit Score: 129.32  E-value: 3.92e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  32 PKAQQAIALFSLGSLLGVAsALVYLIYAHGVHTVQVGGWD----APIGITLvaDNLAVLMITVSQLVLFAVMWFGIGQgI 107
Cdd:PRK06525  24 RRAAELGVLFAALTTLCML-SLAYAFYQAGKVAVTLTLVNlgdvALFGLVI--DPVSVLIGFVVVLLGLLVTLYSTGY-M 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 108 SDGDEDEPISVFVPTY---MLLNMGVSMAF-LAGDLFNMYVGFEVLLVASYVLLTLGASSSRTRAGVSYVMVNMLSSMVF 183
Cdd:PRK06525 100 SPGNREHPVHEGTGRYyafLLLFIGAMAGLvYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGL 179
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 184 LLAIGLVYQAVGTVNFAHISlrmeDIPDGTRTAIFAVLLVAFAVKAAVFPLSAWLPDSYpTAPSMVTA-VFAGLLTKVGV 262
Cdd:PRK06525 180 YLAAATLFLQTGTFALSALS----GLHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAM-EAPTPASAyLHAASMVKVGV 254
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 263 YAIIRtrsVVFPDGRLDDVLMWAGLA----TMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAV---GNTLGLGGAIF 335
Cdd:PRK06525 255 YIFAR---AIQSMGPIPHVIGYVGAVmaivTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLailGSRLALEGSIA 331
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 336 YIVHHILVQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAGAQNGSATAW 415
Cdd:PRK06525 332 YIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWI 411

                 ....
gi 740841431 416 ILVA 419
Cdd:PRK06525 412 LLPA 415
PRK07363 PRK07363
NADH-quinone oxidoreductase subunit M;
70-358 1.22e-29

NADH-quinone oxidoreductase subunit M;


Pssm-ID: 180945 [Multi-domain]  Cd Length: 501  Bit Score: 122.51  E-value: 1.22e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  70 WDAPIGIT--LVADNLAVLMITVSQLVlfavMWFGIgqgISDGDEDEPISVFVPTYMLLNMGVSMAFLAGDLFNMYVGFE 147
Cdd:PRK07363  65 WNEPLGLSysLGVDGLSLPLLVLNSLL----TWIAI---YSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYE 137
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 148 VLLVASYVLLTLGASSSRTRAGVSYVMVNMLSSMVFLLA-IGLVYQAvGTVNFAHISLRMEDIPDGTRTAIFAVLLVAFA 226
Cdd:PRK07363 138 LELIPFYLLIAIWGGEKRGYASIKFLIYTAVSGLLVLAAfLGIVWLS-GSTSFDYDAISTQNLSLNTQLILLTGLLLGFG 216
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 227 VKAAVFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRTRSVVFPD--GRLDDVLMWAGLATMLMGILGAMAQNDIK 304
Cdd:PRK07363 217 IKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQtwSLVAPGLAIIGTISVIYGALSAIAQKDIK 296
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 740841431 305 RLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLIERQA 358
Cdd:PRK07363 297 RMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKV 350
PRK06589 PRK06589
putative monovalent cation/H+ antiporter subunit D; Reviewed
2-440 2.60e-29

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235835 [Multi-domain]  Cd Length: 489  Bit Score: 121.46  E-value: 2.60e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431   2 TTEQLILALIPLPIIVPAATAAIALLLARFPKAQQAIALFSLGSLLgvasaLVYLIYAHGVHTVQVGGWDAPIGITLVAD 81
Cdd:PRK06589   8 TPNNLLLSTLLVGALNLTSPFATKKDSFIRNFLLITISIFFFGNIL-----LIDLLFLKGIRAQFELMDFGNYSIGLHLE 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  82 NLAVLMITVSQLVLFAVMWFGIGQGISDGDEDEPISVFVPTYMLLnMGVSMAFlAGDLFNMYVGFEVLLVASYVLLTLGA 161
Cdd:PRK06589  83 PLGLIFLLLIGFLWICALLYTPKYLAINNIDSSSRFLFFFNLTIL-IGVLIAL-SSDLFTMFVCYELLTISTAFLIGHTR 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 162 SSSRTRAGVSYVMVNMLSSMV-FLLAIGLVYQAVGTVNFAHISLRMEDipdgtRTAIFAVLLVAFAVKAAVFPLSAWLPD 240
Cdd:PRK06589 161 NNISLSGGYKYLKILMISALLlFLPAVILIYTKTGNLDFVSGGLFSKN-----QSIILLLMFIYGIAKTAIFPVHSWLPA 235
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 241 SYpTAPSMVTAVF-AGLLTKVGVYAIIRTRSVVFPDGRLDDV------LMWAGLATMLMGILGAMAQNDIKRLLSFTLVS 313
Cdd:PRK06589 236 AM-VAHYPVSALLhAVIVVKTGLFCIYKILLYIFGLSYLQRIfaefnwLIFIPIVSIFYSSLKALKTDNIKKILAYSTIS 314
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 314 HIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPF 393
Cdd:PRK06589 315 QLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIF 394
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*....
gi 740841431 394 SGFLGKVMLIEAGAQNGSATAWILVAGSIITS--LLTLYTMILVWSKAF 440
Cdd:PRK06589 395 SGFISKFLILLAASEQNQPWLSIIVMLVVIASsiLSALYLLKILSSIYK 443
PRK12561 PRK12561
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
134-401 4.49e-28

NAD(P)H-quinone oxidoreductase subunit 4; Provisional


Pssm-ID: 237137 [Multi-domain]  Cd Length: 504  Bit Score: 117.83  E-value: 4.49e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 134 FLAGDLFNMYVGFEVLLVASYVLLTLGASSSRTRAGVSYVMVNMLSSmVFLLAIGLVYQAVG-TVNFAHISLRMEDIPDG 212
Cdd:PRK12561 104 FLAQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALAS-IFILVAGLALALSGdTFTFDLAELGAKSYPLA 182
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 213 TRTAIFAVLLVAFAVKAAVFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRTRSVVFPDG--RLDDVLMWAGLATM 290
Cdd:PRK12561 183 LELLLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAhvYFAPALAILGVVNI 262
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 291 LMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGSLA 370
Cdd:PRK12561 263 IYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLA 342
                        250       260       270
                 ....*....|....*....|....*....|.
gi 740841431 371 KTSPLLALLYLVPALNLGGIPPFSGFLGKVM 401
Cdd:PRK12561 343 KVMPKTFALFTASSMASLALPGMSGFVSELT 373
PRK06458 PRK06458
hydrogenase 4 subunit F; Validated
1-433 9.54e-28

hydrogenase 4 subunit F; Validated


Pssm-ID: 235805 [Multi-domain]  Cd Length: 490  Bit Score: 116.57  E-value: 9.54e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431   1 MTTEQLILALIPLPIIVpaataaiALLLARFPKAQQAIALFSLGSLLGVASALVYLIyahgvhTVQVGGWDAPIGITLVA 80
Cdd:PRK06458   1 MSYSILFALLLLIPLLA-------SLLLFALRKRRLVATLNVLGITLTLILALWLVF------TVPDAGEIFAAGLWFFI 67
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  81 DNLAVLMITVSQLVLFAVMWFGIG--QGISDGDEDEPISVFVPTYMLLNMGVSM--AFLAGDLFNMYVGFEVLLVASYVL 156
Cdd:PRK06458  68 DDLNVFFLALIGVVGFLTSLYSIGymRHEVEHGELSPVTLRLYYGMYQLFLFTMllALTSNNLGLMWVAIEATTLSSALL 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 157 LTLGASSSRTRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTV-------NFAHISLRMEDIPDGTRTAI-FAVLLVAFAVK 228
Cdd:PRK06458 148 VGIYRTRASLEAAWKYIIICSVGVAFALFGTILVYANAATVmgdgemaILWTELLKHASLLDPTLMKLaFVFLLIGFGTK 227
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 229 AAVFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRTRSVV-------FPdGRLddvLMWAGLATMLMGILGAMAQN 301
Cdd:PRK06458 228 VGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIdaaigsdFP-GRL---LLIFGLLSVLVAAFFLLRQR 303
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 302 DIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLLALLYL 381
Cdd:PRK06458 304 DIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLM 383
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|..
gi 740841431 382 VPALNLGGIPPFSGFLGKVMLIEAGAQNGSATAWILVAGSIITSLLTLYTMI 433
Cdd:PRK06458 384 LGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAALVRRV 435
PRK06277 PRK06277
energy conserving hydrogenase EhbF;
10-441 2.15e-27

energy conserving hydrogenase EhbF;


Pssm-ID: 235767 [Multi-domain]  Cd Length: 478  Bit Score: 115.51  E-value: 2.15e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  10 LIPLPIIVPAATAAIALLLARFPKAQQAIALFSLGSLLGVASALVYLIYAHGVHTVqVGGWDApiGITLVADNLAVLMIT 89
Cdd:PRK06277   3 LLPLMVVFPMICAIIFNLLHGKDKLIKYLTFIVAILLPILPFLASYGYYYFGGHGL-VNGYHS--GITYLFNPAKQIIIF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  90 VSQLVLFAVMWFGIGQGISDGdedepisVFVPTYMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVLLTLGASSSRTRAG 169
Cdd:PRK06277  80 VLSLIASLVLITGLGEKKSSG-------LYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASGTEEAYKAA 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 170 VSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHISLRMEDIPDGTRTAI-FAVLLVAFAVKAAVFPLSAWLPDSYPTAPSM 248
Cdd:PRK06277 153 LKYMILGNVAGSILLLGIGFLLASTGTLNITDIHNALLVNPTSPVIYGgLLLLIFGLLYGSGLPPFHTIKSDIYAKAKPF 232
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 249 VTAVFAGLlTKVGVYAI------IRTRSVVFPDGRLddVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGI 322
Cdd:PRK06277 233 GSALLQTF-SKFVLVALmlvifkLFGGLSYFPSAQG--VLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGL 309
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 323 AVGNTLGLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVML 402
Cdd:PRK06277 310 ALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLML 389
                        410       420       430
                 ....*....|....*....|....*....|....*....
gi 740841431 403 IEAGAQNGSATAWILVagsIITSLLTLYTMIlvwsKAFW 441
Cdd:PRK06277 390 AQAAMQANMPELAIIM---IIVSIGTFVSMM----KAFY 421
PRK12650 PRK12650
DUF4040 family protein;
135-460 5.33e-27

DUF4040 family protein;


Pssm-ID: 237158 [Multi-domain]  Cd Length: 962  Bit Score: 116.30  E-value: 5.33e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 135 LAGDLFNMYVGFEVLLVASYVLLTLGASSSRTRAgVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHISLRMEDIPDGTR 214
Cdd:PRK12650 128 LADDVVVLFVAWELVSLASFFLIARSGSGGEAGS-IRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVWAEKPGL 206
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 215 TAIFAVLL-VAFAVKAAVFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRTRSVVFPDGRLDDVLMWAGLATMLMG 293
Cdd:PRK12650 207 TTVVAVLIaVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMG 286
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 294 ILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGSLAKTS 373
Cdd:PRK12650 287 AVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRM 366
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 374 PLLALLYLVPALNLGGIPPFSGFLGKVMLIEA--GAQNGSATAWILVAGSIITSLLTL-YTMILVWSKAFW--RDRSDAP 448
Cdd:PRK12650 367 PFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAflEAPGGNAGVVLLLVGAALGAVFTFaYSARLVLGAFVDgpRDMSHVK 446
                        330
                 ....*....|..
gi 740841431 449 EGDTVLAQPAAL 460
Cdd:PRK12650 447 EAPVSLWLPAAL 458
PRK06473 PRK06473
NADH-quinone oxidoreductase subunit M;
124-358 4.20e-26

NADH-quinone oxidoreductase subunit M;


Pssm-ID: 235810 [Multi-domain]  Cd Length: 500  Bit Score: 111.72  E-value: 4.20e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 124 MLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVLLTLGASSSRTRAGVSYVMVNMLSSMVFLLA-IGLVYQAvGTVNFAHI 202
Cdd:PRK06473 114 LLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGGQRRGYAATKFLLYTAISGILILVSfLGLVWLS-GASSFDYE 192
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 203 SLRMEDIPDGTRTAIFAVLLVAFAVKAAVFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRTRSVVFPDGRLDDVL 282
Cdd:PRK06473 193 PLRSHTLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAP 272
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 740841431 283 MWAGLA--TMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLIERQA 358
Cdd:PRK06473 273 WLATWAvvSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKT 350
PRK08676 PRK08676
hydrogenase membrane subunit; Validated
82-461 4.34e-26

hydrogenase membrane subunit; Validated


Pssm-ID: 181537 [Multi-domain]  Cd Length: 485  Bit Score: 111.77  E-value: 4.34e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  82 NLAVLMITVSQLVLFAVMWFG-IGQGISDGDED-EPISVFVPTYMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVLLTL 159
Cdd:PRK08676  65 GIFVVLIASVVFILAALYARGyVDHLLSNGELDpENLKVFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAI 144
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 160 GASSSRTRAGVSYV------MVNMLSSMVFLLAIGLVYQAVGTVNFAHISLRMEDIPDGTRTAIFAVLLVAFAVKAAVFP 233
Cdd:PRK08676 145 LSARENIDAALKYIfiastaMIFAFIGLIFLFSLTRQALGTGTLNWTELAAHASLLSPSVLGASFLFIFIGFLAKSGLVP 224
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 234 LSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRTRSVVFPDG---RLDDVLMWAGLATMLMGILGAMAQNDIKRLLSFT 310
Cdd:PRK08676 225 FHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGaaeQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFS 304
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 311 LVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGI 390
Cdd:PRK08676 305 SIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGM 384
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 740841431 391 PPFSGFLGKV-MLIEAGAQNGSATAWILVAGSIITSLLTLYTMilvwsKAFWRdRSDAPEGDTVLAQPAALR 461
Cdd:PRK08676 385 PPFPLFLSKFfILLQLGGISVWLVLAVLLLLLLAASSFAIFLL-----KAFTR-VSEGNADRPVFRTPLSMK 450
ND4 MTH00226
NADH dehydrogenase subunit 4; Provisional
119-430 1.06e-25

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214466 [Multi-domain]  Cd Length: 505  Bit Score: 110.78  E-value: 1.06e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 119 FVPTYMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVLLTL-GASSSRTRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTV 197
Cdd:MTH00226 133 FLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIwGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTT 212
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 198 NFAHISLRMEDIPDGTRTAIFAVLLVAFAVKAAVFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRTRSVVFPDG- 276
Cdd:MTH00226 213 DYLTLASCSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGa 292
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 277 -RLDDVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLIE 355
Cdd:MTH00226 293 qNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILY 372
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 740841431 356 RQAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAGAQNGSATAWILVAGSIITSLLTLY 430
Cdd:MTH00226 373 DRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
PRK02546 PRK02546
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
124-352 8.76e-25

NAD(P)H-quinone oxidoreductase subunit 4; Provisional


Pssm-ID: 235050 [Multi-domain]  Cd Length: 525  Bit Score: 108.26  E-value: 8.76e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 124 MLLNMGVSMA-FLAGDLFNMYVGFEVLLVASYVLLTLGASSSRTRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHI 202
Cdd:PRK02546 121 MLAMYGGQIAvFAVQDMLLFFLAWELELIPVYLLLAIWGGKKRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMT 200
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 203 SLRMEDIPDGTRTAIFAVLLVAFAVKAAVFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRTRSVVFPD--GRLDD 280
Cdd:PRK02546 201 ALAAKDFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDahAQFAP 280
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 740841431 281 VLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVG 352
Cdd:PRK02546 281 LLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVG 352
PRK12644 PRK12644
putative monovalent cation/H+ antiporter subunit A; Reviewed
135-520 4.79e-23

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237154 [Multi-domain]  Cd Length: 965  Bit Score: 103.85  E-value: 4.79e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 135 LAGDLFNMYVGFEVLLVASYVLLTLGA--SSSRtRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHIslrMEDIPDG 212
Cdd:PRK12644 124 TSDNLLLLYVFWELTTVLSFLLIGHYAerAASR-RAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSEL---LADPPTG 199
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 213 TRTAIFAVLLVAFAV-KAAVFPLSAWLPDSYpTAPSMVTA-VFAGLLTKVGVYAIIRtrsvVFPDgrLDDVLMWA----- 285
Cdd:PRK12644 200 PAVSVAVVLILVGALsKSAIVPFHFWLPGAM-AAPTPVSAyLHAAAMVKAGIYLVAR----LAPG--FADVPVWRptvlv 272
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 286 -GLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLR 364
Cdd:PRK12644 273 lGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIR 352
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 365 SLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEA--GAQNGSATAWILVAGSIITSLLTL-YTMILVWSkAFW 441
Cdd:PRK12644 353 KLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAvlHDGALGPAGPVVLAGIVLGSILTVaYSLRFLWG-AFA 431
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 740841431 442 RDRSDAPEGDTVLAQPAalrertqmvaiaerddvgkmPLGMVMPTALLVIASVGVTVLAGPLSNVATEAASNVANVDEY 520
Cdd:PRK12644 432 RKPGAFPSVAVTEMHRP--------------------SPLFLAPPAVLAVLGLVLGLLPAPLDALLAPYADTVPAAGGE 490
NDH_I_L TIGR01974
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ...
65-435 1.08e-22

proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273905 [Multi-domain]  Cd Length: 609  Bit Score: 101.97  E-value: 1.08e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431   65 VQVGGWDapIGITLVADNLAVLMITVSQLVLFAVMWFGIGQGisdgDEDEPISVFVPTYMLLNMGVSMAFLAGDLFNMYV 144
Cdd:TIGR01974  68 ISVGGFQ--VDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYM----AHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFF 141
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  145 GFEVLLVASYVLLTLGASS-SRTRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHISLRMEDIPDGTRTAIFAVLLV 223
Cdd:TIGR01974 142 GWEGVGLCSYLLIGFWYKKpSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFALAPGAFFSALTLICLLLFI 221
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  224 AFAVKAAVFPLSAWLPDSY--PT-------APSMVTAvfaglltkvGVYAIIRTrSVVF---PDGRLddVLMWAGLATML 291
Cdd:TIGR01974 222 GAMGKSAQLPLHTWLPDAMegPTpvsalihAATMVTA---------GVYLVART-SPLFelsPTALY--LVTIIGAITAL 289
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  292 MGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGntlGLGGAIFYIVHHILVQTALFLVVG-LIERQAGSSSLRSLGSLA 370
Cdd:TIGR01974 290 FAATVALVQNDIKRILAYSTMSQLGYMFLALGVG---AYAAAIFHLMTHAFFKALLFLGAGsVIHAMHHEQDIRKMGGLR 366
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 740841431  371 KTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEA--GAQNGSATAWILVAGSIITSLLTLYTMILV 435
Cdd:TIGR01974 367 KKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAafASGTHSFLFVAGLIGAFLTAFYSFRLIFMV 433
PRK06590 PRK06590
NADH:ubiquinone oxidoreductase subunit L; Reviewed
39-436 1.33e-22

NADH:ubiquinone oxidoreductase subunit L; Reviewed


Pssm-ID: 235836 [Multi-domain]  Cd Length: 624  Bit Score: 101.77  E-value: 1.33e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  39 ALFSLGSLLGVASALVYLIYAHGVHTVQVGGWDAPIGITLvaDNLAVLMITVSQLVLFAVMWFGIGqgISDGDEDEP--- 115
Cdd:PRK06590  43 ALLSLVVFFDFLLGGGRAFSQTLWTWISVGDFDVDFGLRV--DGLSATMLVVVTGVSFLVHIYSIG--YMAHDEGYRrff 118
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 116 --ISVFVPTYMLLnmgvsmaFLAGDLFNMYVGFEVLLVASYVLLtlGASSSRTRAGVS----YVMvNMLSSMVFLLAIGL 189
Cdd:PRK06590 119 ayLNLFTFSMLML-------VLSDNLLQLFFGWEGVGLCSYLLI--GFWYKKPSAGAAamkaFIV-NRVGDVGLALGIFL 188
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 190 VYQAVGTVNFAHI---SLRMEDIPDGTRTAIFAVLLVAFAVKAAVFPLSAWLPDSY--PT-------APSMVTAvfagll 257
Cdd:PRK06590 189 LFAEFGSLNYDEVfaaAPQFFGLGWSALTLICLLLFIGAMGKSAQFPLHTWLPDAMegPTpvsalihAATMVTA------ 262
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 258 tkvGVYAIIRTrSVVF---PDGRLddVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGntlGLGGAI 334
Cdd:PRK06590 263 ---GVYLVARM-SPLFelsPEALL--FVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVG---AYAAAI 333
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 335 FYIVHHILVQTALFL----VV-------------GLierqagssslrslgslAKTSPLLALLYLVPALNLGGIPPFSGFL 397
Cdd:PRK06590 334 FHLMTHAFFKALLFLgagsVIhamhheqdirkmgGL----------------RKKMPVTYATFLIGTLALIGIPPFAGFF 397
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|
gi 740841431 398 GKVMLIEAGAQNGSATA-WILVAGSIITSlltLYTMILVW 436
Cdd:PRK06590 398 SKDEILEAAFANGHINLfVAGLVGAFLTA---FYSFRLIF 434
ND2 MTH00196
NADH dehydrogenase subunit 2; Provisional
168-411 2.57e-22

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214453 [Multi-domain]  Cd Length: 365  Bit Score: 98.56  E-value: 2.57e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 168 AGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHISLRMEDIPD--GTRTAIFAVLL-VAFAVKAAVFPLSAWLPDSYPT 244
Cdd:MTH00196  45 AGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLNSGQSfsSVSVPIGYLLIiVALLFKLSVAPFHMWAPDVYEG 124
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 245 APSMVTAVFAgLLTKVGVYAIIRTRSVVFpdgrldDVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAV 324
Cdd:MTH00196 125 APTKTTALLA-IVPKLGIFSILVSIGLNV------NILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEI 197
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 325 GNTLGLGGAIFYIVHHILVQTALFLVVGLIerQAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIE 404
Cdd:MTH00196 198 GSFESIQASLVYLFIYIIMSICVFSIILAL--NVYKNLIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILL 275

                 ....*..
gi 740841431 405 AGAQNGS 411
Cdd:MTH00196 276 SGVVYQY 282
ND2 MTH00199
NADH dehydrogenase subunit 2; Provisional
138-423 4.76e-22

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177245 [Multi-domain]  Cd Length: 460  Bit Score: 99.32  E-value: 4.76e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 138 DLFNMYVGFEVLLVASYVLLTLGASSSR-TRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHI-SLRMEDIPDGTRT 215
Cdd:MTH00199 118 NWLSIYLAIELQTLTLFILVALKRDSAYsTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQGInSILTGDVGKILIT 197
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 216 aifavllVAFAVKAAVFPLSAWLPDSYPTAPSMVTAVFAgLLTKVGVYAIIrtrsvvFPDGRLDDVLMWAGLATMLMGIL 295
Cdd:MTH00199 198 -------ISLLFKLSAAPFHMWAPDVYEGAPTITTALLA-TVPKIGVFSIL------VQIGPVTNVVLICAVLSIIYGAI 263
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 296 GAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVvgLIERQAGSSSLRSLGSLAKTSPL 375
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIYMIIYVIMSICSFSI--ILSLKLTKGLIVEVSGLSRKNPV 341
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 740841431 376 LALLYLVPALNLGGIPPFSGFLGKVMLIEAGAQNGS-ATAWILVAGSII 423
Cdd:MTH00199 342 IALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYyLICIIAVLSSVI 390
PRK12647 PRK12647
putative monovalent cation/H+ antiporter subunit A; Reviewed
123-449 8.96e-22

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237156 [Multi-domain]  Cd Length: 761  Bit Score: 99.61  E-value: 8.96e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 123 YMLLNMGvSM--AFLAGDLFNMYVGFEVLLVASYVLLTL--GASSSRtRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVN 198
Cdd:PRK12647 100 YILLFMA-SMlgLVLSDNLITLFVFWELTSITSFLLIGFnhEREAAR-RAALQALLVTGGGGLALLAGLILLGNVTGTYS 177
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 199 FAHIsLRMEDIPDGTRTAIFAVLLV---AFAvKAAVFPLSAWLPDSYpTAPSMVTA-VFAGLLTKVGVYAIIRTRSVVFP 274
Cdd:PRK12647 178 LSEL-LASGDVIREHPLYLAILLLVlggAFT-KSAQFPFHFWLPNAM-EAPTPVSAyLHSATMVKAGIYLLARLNPVLGG 254
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 275 DGRLDDVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLI 354
Cdd:PRK12647 255 TPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGII 334
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 355 ERQAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAGAQNGSATAWILVAgSIITSLLTLYTMIL 434
Cdd:PRK12647 335 DHETGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVA-AVLGNALMVAVAFL 413
                        330
                 ....*....|....*
gi 740841431 435 VWSKAFWRDRSDAPE 449
Cdd:PRK12647 414 VGIKPFLGKLVETPK 428
PRK02504 PRK02504
NAD(P)H-quinone oxidoreductase subunit N;
45-435 8.82e-21

NAD(P)H-quinone oxidoreductase subunit N;


Pssm-ID: 235044 [Multi-domain]  Cd Length: 513  Bit Score: 95.89  E-value: 8.82e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  45 SLLGVASALVYLIYahgvhtvqvgGWDAPIGITLV----ADNLAVL---MITVSQLVLFAVMWFGIGQGISdgdedePIS 117
Cdd:PRK02504  47 AIAGLGAALVALAL----------QWDNPNPISFLgsfnADNLSIAfraIIALSTLVTLLMSWRYVEQSGT------PLG 110
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 118 VFVPtyMLLNMGVSMAFLAG--DLFNMYVGFEVLLVASYVLLTLGASSSRT-RAGVSYVMVNMLSSMVFLLAIGLVYQ-A 193
Cdd:PRK02504 111 EFAA--ILLTATLGGMFLSGatELVMIFISLETLSIASYLLTGYMKRDPRSnEAALKYLLIGAASSAIFLYGSSLLYGlS 188
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 194 VGTVNFAHISLRMEDIPdGTRTAIFAVLLVA-FAVKAAVFPLSAWLPDSYPTAPSMVTAvFAGLLTKVGVYAI-IRTRSV 271
Cdd:PRK02504 189 GGSTQLSAIALALITSP-SLGLALALVFVIAgIAFKISAVPFHQWTPDVYEGSPTPVVA-FLSVGSKAAGFALaIRLLVT 266
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 272 VFPDGRLDDVLMWAGLA--TMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFL 349
Cdd:PRK02504 267 AFPSFDEQWKLLFTALAilSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTEAGYASMVFYLLAYLFMNLGAFA 346
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 350 VVGLIERQAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAGAQNGsatAWILVAGSIITSLLTL 429
Cdd:PRK02504 347 CVILFSLRTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQAG---LYLLVLVGLVTSVISI 423

                 ....*.
gi 740841431 430 YTMILV 435
Cdd:PRK02504 424 YYYIRV 429
PRK08042 PRK08042
formate hydrogenlyase subunit 3; Reviewed
42-440 4.54e-20

formate hydrogenlyase subunit 3; Reviewed


Pssm-ID: 181206 [Multi-domain]  Cd Length: 593  Bit Score: 93.74  E-value: 4.54e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  42 SLGSLLGVASALVYLIYAHGV--------HTVQVGGWDApigITLVADNLAVLMITvsqlvLFAVMWFGIGQGISDGded 113
Cdd:PRK08042  25 AVGSLYTAAAGFTVLTGAVGVsgalslvsYDVQISPLNA---IWLITLGLCGLFVS-----LFNIDWHRHAQVKANG--- 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 114 episvfvPTYMLLNMGVSMAFLAGDLFNMYVGFEVLLVASyVLLTLGASSsrtraGVSYVMVNMLSSMVFLLAIGLVYQA 193
Cdd:PRK08042  94 -------LLINLLMAAAVCAVIASNLGMFVVMAEIMALCA-VFLTGNSKE-----GKLWFALGRLGTLLLAIACWLLWQR 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 194 VGTVNFAHISLRMEDIPDGTrtAIFAVLLVAFAVKAAVFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIrTRSVVF 273
Cdd:PRK08042 161 YGTLDLRLLDMRMQQLPLGS--DIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGIL-TLSLLG 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 274 PDGRL--DDVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNT-----------LGLGGAIFYIVHH 340
Cdd:PRK08042 238 GNAPLwwGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGVTgialeqpaliaLGLVGGLYHLLNH 317
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 341 ILVQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAGAQNGSATAWI---- 416
Cdd:PRK08042 318 SLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGAFVarll 397
                        410       420
                 ....*....|....*....|....*..
gi 740841431 417 ---LVAGSIITSLLTLYTMILVWSKAF 440
Cdd:PRK08042 398 gplLAVGLAITGALAVMCMAKVYGVTF 424
PRK07376 PRK07376
NADH-quinone oxidoreductase subunit L;
36-399 6.76e-20

NADH-quinone oxidoreductase subunit L;


Pssm-ID: 236005 [Multi-domain]  Cd Length: 673  Bit Score: 93.55  E-value: 6.76e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  36 QAIALFSLgSLLGVASALVYLIYA---HGVHTV-------QVGGWDAPIGITLvaDNLAVLMITVSQLVLFAVMWFgigq 105
Cdd:PRK07376  38 QPVAVLLI-SLVGAAAVLSYALLWsqiQGHEPYerlfewaSAGDFHLPMGYVI--DPLGAVMLVLVTTVALLVMIY---- 110
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 106 giSDGD-EDEPISVFVPTYMLLnMGVSMAFL--AGDLFNMYVGFEVLLVASYVLLTL-----GASSSRTRAGVsyvmVNM 177
Cdd:PRK07376 111 --SDGYmAHDPGYVRFFAYLSL-FSSSMLGLviSPNLVQIYVFWELVGMCSYLLVGFwydrkGAADAAQKAFV----VNR 183
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 178 LSSMVFLLAIGLVYQAVGTVNFAHISLRMEDIPDGTRTAIFAVLLVAFAV------KAAVFPLSAWLPDSY--PT----- 244
Cdd:PRK07376 184 VGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVflgpmaKSAQFPLHVWLPDAMegPTpisal 263
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 245 --APSMVTAvfaglltkvGVYAIIRTRSVVFPDGRLDDVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGI 322
Cdd:PRK07376 264 ihAATMVAA---------GVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAM 334
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 323 AVGntlGLGGAIFYIVHHILVQTALFL-----------VVGliERQAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIP 391
Cdd:PRK07376 335 GCG---AYSAGLFHLMTHAYFKAMLFLgsgsvihgmeeVVG--HDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIP 409

                 ....*...
gi 740841431 392 PFSGFLGK 399
Cdd:PRK07376 410 PFAGFWSK 417
ND4 MTH00204
NADH dehydrogenase subunit 4; Provisional
125-430 7.84e-20

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 164750 [Multi-domain]  Cd Length: 485  Bit Score: 92.43  E-value: 7.84e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 125 LLNMGVsmaFLAGDLFNMYVGFEVLLVASYVLLTL-GASSSRTRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAhiS 203
Cdd:MTH00204 123 VLLIGV---FSVLDLLLFYILFEGILIPMFLLIGIwGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQ--I 197
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 204 LRMEDIPDGTRTAIFAVLLVAFAVKAAVFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRTRSVVFPDGR--LDDV 281
Cdd:MTH00204 198 LLNIKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASeyFAPL 277
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 282 LMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLIERQAGSS 361
Cdd:MTH00204 278 IVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTR 357
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 740841431 362 SLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAGAQNGSATAWILVAGSIITSLLTLY 430
Cdd:MTH00204 358 LIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLY 426
ND4 MTH00217
NADH dehydrogenase subunit 4; Provisional
125-398 3.81e-19

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214462 [Multi-domain]  Cd Length: 482  Bit Score: 90.50  E-value: 3.81e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 125 LLNMGVsmaFLAGDLFNMYVGFEVLLVASYVLLTL-GASSSRTRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHI- 202
Cdd:MTH00217 120 ILLMGV---FTILDLVGFYILFEGILIPMFLIIGIwGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALc 196
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 203 SLRMEDipdGTRTAIFAVLLVAFAVKAAVFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRTRSVVFPDGR--LDD 280
Cdd:MTH00217 197 CLKIEK---ELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASeyFSP 273
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 281 VLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLIERQAGS 360
Cdd:MTH00217 274 LIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHT 353
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 740841431 361 SSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLG 398
Cdd:MTH00217 354 RLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVG 391
ndhB CHL00049
NADH dehydrogenase subunit 2
134-430 4.26e-19

NADH dehydrogenase subunit 2


Pssm-ID: 176990 [Multi-domain]  Cd Length: 494  Bit Score: 90.45  E-value: 4.26e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 134 FLAG--DLFNMYVGFEVLLVASYvLLTlGASSSRTR---AGVSYVMVNMLSSMVFLLAIGLVY-------QAVGTVNfAH 201
Cdd:CHL00049 126 FLCGanDLITIFVALECLSLCSY-LLS-GYTKKDVRsneATMKYLLMGGASSSILVYGFSWLYglsggeiELQEIVN-GL 202
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 202 ISLRMEDIPDGTRTAIFavLLVAFAVKAAVFPLSAWLPDSYPTAPSMVTAvFAGLLTKVGVYAI-IRTRSVVFP--DGRL 278
Cdd:CHL00049 203 INTQMYNSPGISIALIF--ITVGIGFKLSLAPFHQWTPDVYEGSPTPVVA-FLSVTSKVAASALaTRIFDIPFYfsSNEW 279
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 279 DDVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNT-LGLGGAIFYIVHHILVQTALFLVVGLIERQ 357
Cdd:CHL00049 280 HLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSnDGYASMITYMLFYIFMNLGTFACIVLFGLR 359
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 740841431 358 AGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAGAQNGSataWILVAGSIITSLLTLY 430
Cdd:CHL00049 360 TGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGKLYLFWCGWQAGL---YFLVSIGLLTSVISIY 429
PRK12646 PRK12646
DUF4040 family protein;
123-441 8.99e-19

DUF4040 family protein;


Pssm-ID: 183646 [Multi-domain]  Cd Length: 800  Bit Score: 90.20  E-value: 8.99e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 123 YMLLNMgVSM--AFLAGDLFNMYVGFEVLLVASYVLLTLGASSSRTRAG-VSYVMVNMLSSMVFLLAIGLVYQAVGTVNF 199
Cdd:PRK12646 115 YLTLFM-FSMigIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGaIQSFMITVFGGLALLVGFIMLYIMTGTNNI 193
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 200 AHISLRMEDIPDGTR--TAIFAVLLVAFAvKAAVFPLSAWLPDSYpTAPSMVTA-VFAGLLTKVGVYAIIRTRSVVFPDG 276
Cdd:PRK12646 194 TEILGQADHIKNHGLfiPMIFMFLLGAFT-KSAQFPFHIWLPRAM-AAPTPVSAyLHSATMVKAGIFLLFRFTPLLGLSN 271
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 277 RLDDVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGN--------------TLGLGGAIFYIVHHIL 342
Cdd:PRK12646 272 MYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGgyaqhqqdaiasiyVFVLFAALFHLMNHAI 351
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 343 VQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVM----LIEAG--AQNGSATAWI 416
Cdd:PRK12646 352 FKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMfldaLTQTGqlSQFSLISMII 431
                        330       340
                 ....*....|....*....|....*
gi 740841431 417 LVAGSIITSLLTLYTMILVWSKAFW 441
Cdd:PRK12646 432 IVFIGVIASIFTFTYALYMVKEVFW 456
PRK06591 PRK06591
putative monovalent cation/H+ antiporter subunit D; Reviewed
67-445 1.36e-18

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235837 [Multi-domain]  Cd Length: 432  Bit Score: 88.30  E-value: 1.36e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  67 VGGWDAPIGITLVADNLAVLMITVSQLVLFAVMWFG---IGQGISDGDEDEPISVFVPTYMLLNMGVSMAFLAGDLFNMY 143
Cdd:PRK06591  62 MGGWTSKIGIEYRLNSLNQAIIVYLNLVLLFFLVFChkiTNQTILKYINNNRKSLFYGILLFAHTGYLGMIATNDFFNLY 141
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 144 VGFEVLLVASYVLLTLGASSSRTRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHISLRMEDIPDgTRTAIFAV--L 221
Cdd:PRK06591 142 VFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDIAAYLQEHTN-SRIITIAIgfF 220
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 222 LVAFAVKAAVFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRTRSVVFP----DGRLDDVLMWAGLATMLMGILGA 297
Cdd:PRK06591 221 LIGAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFTYIIIGyetiKTAITNFIRPIALATLIIAPYFA 300
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 298 MAQNDIKRLLSFTLVSHIGYmIFGIAVgNTLGLGGAIFYIVHHILVQTALFLVVGLIERQagssslrslgslaKTSPLLA 377
Cdd:PRK06591 301 YQAKNFKNIIIYSCFTQIGY-VFLLYV-TENGIIILPSLLLADSINKIALFLIDAYNESY-------------KREPNKV 365
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 740841431 378 LLYLVPALNLgGIPPFSGFLGKVMLIEAGAQNGSATAWILVAGSIITSLLTLYTMILVwskAFWRDRS 445
Cdd:PRK06591 366 LIIIAIICSC-GLPISPLFFIKVNILELLLTQNLLLDFIIILLSSVGSLFYHYKMVLL---LFPTKQE 429
ND4 MTH00206
NADH dehydrogenase subunit 4; Provisional
52-441 1.66e-18

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214458 [Multi-domain]  Cd Length: 450  Bit Score: 88.07  E-value: 1.66e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  52 ALVYLIYAHGVHTVQVGGWDAPIGITLVADNLAVLMITVSQLVLFAVMWFGIGQGISDGdedepiSVFVPTYMLLNMGVS 131
Cdd:MTH00206  33 ALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHMKNEPINRQ------RIYITLLIVLQLFLI 106
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 132 MAFLAGDLFNMYVGFEVLLVASYVLLT-LGASSSRTRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTvnFAHISLRMEDIP 210
Cdd:MTH00206 107 LFFSSSNLLLFYILFEASLIPTLLLITrWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGS--LSLYILYFSKLT 184
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 211 DGTRTAIFAVLLVAFAVKAAVFPLSAWLPDSY---PTAPSMVtavFAGLLTKVGVYAIIRTRSVVFPD-GRLDDVLMWAG 286
Cdd:MTH00206 185 TWNNNLWWLACILAFLVKLPLYGVHLWLPKAHveaPVAGSMV---LAGVLLKLGGYGMMRIILILGPStKLSSYFFIILG 261
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 287 LATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLI-ERQAGSSSLRS 365
Cdd:MTH00206 262 LWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLANLLyERSHTRTILGN 341
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 740841431 366 LGSLAKTSPLLALLYLVPALNLgGIPPFSGFLGKVMLIEAGAQNGSATAWILVAGSIITSLLTLYTMI-LVWSKAFW 441
Cdd:MTH00206 342 RGLQMILPLLSFWWLLFFLANL-GLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVmTQHGKTPN 417
ND4 MTH00044
NADH dehydrogenase subunit 4; Validated
134-403 1.44e-17

NADH dehydrogenase subunit 4; Validated


Pssm-ID: 214411 [Multi-domain]  Cd Length: 458  Bit Score: 85.41  E-value: 1.44e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 134 FLAGDLFNMYVGFEVLLVASYVLLT-LGASSSRTRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHISLRMEDIPDG 212
Cdd:MTH00044 111 FSSLELILFYIAFETTLIPTLILITrWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSELNWLTSLSS 190
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 213 TRTAIFAVL-LVAFAVKAAVFPLSAWLPDSY---PTAPSMVtavFAGLLTKVGVYAIIRTR------SVVFPDGRLDDVL 282
Cdd:MTH00044 191 NSSSIWWIFcILAFLVKMPIYGFHLWLPKAHveaPVAGSMI---LAAILLKLGGYGLIRLInlfslpSANNISFILIVFC 267
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 283 MWAGLATMLMGIlgamAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALF-LVVGLIERQAGSS 361
Cdd:MTH00044 268 CWGALITSIICL----RQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFcLANILYERSGTRT 343
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 740841431 362 SLRSLGSLAKTsPLLALLYLVP-ALNLgGIPPFSGFLGKVMLI 403
Cdd:MTH00044 344 LSITRGFKLIT-PLLPLWWLIFcAANL-GLPPLPNLIGELLII 384
ND5 MTH00209
NADH dehydrogenase subunit 5; Provisional
74-438 2.02e-16

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177252 [Multi-domain]  Cd Length: 564  Bit Score: 82.39  E-value: 2.02e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  74 IGITLVADNLAVLMITVSQLVLFAVMWFGIgqgiSDGDEDEPISVFvptYMLLNMGV-SMAFL--AGDLFNMYVGFEVLL 150
Cdd:MTH00209  44 ISFPLIIDKMSLLFSSVVLLISGSVMWFST----SYMAGEKFKKRF---ILLVLLFIlSMNFLifVPNLITLLLGWDGLG 116
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 151 VASYVLLTLGASSSRTRAGVSYVMVNMLSSMVFLLAIGlvyqavGTVNFAHISLRMEDIPDGTRTAIFAVLLVAFAVKAA 230
Cdd:MTH00209 117 LVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIA------WMLMHGNWNIFYLNFNSNLGSVISVLIVLAAMTKSA 190
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 231 VFPLSAWLPDSYpTAPSMVTA-VFAGLLTKVGVYAIIRTRSVVFPDGRLDDVLMWAGLATMLMGILGAMAQNDIKRLLSF 309
Cdd:MTH00209 191 QIPFSAWLPAAM-AAPTPVSAlVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIAL 269
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 310 TLVSHIGYMIFgiavgnTLGLGG---AIFYIVHHILVQTALFLVVG-LIERQAGSSSLRSLGSLAKTSPLLALLYLVPAL 385
Cdd:MTH00209 270 STLSQLGLMMC------SLGLNQpelAFFHLITHALFKALLFICAGnIIHSHGHSQDIRMVGNLWYQMPITSICLNIANL 343
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 740841431 386 NLGGIPPFSGFLGKVMLIEAGAQNGsATAWILVAGSIITSLLTLYTMIL----VWSK 438
Cdd:MTH00209 344 SLCGIPFLAGFYSKDLILESMLESN-MPIMTLILMFLSTSLTAAYSMRLsyfsLWGP 399
ND2 MTH00144
NADH dehydrogenase subunit 2; Provisional
124-441 1.33e-15

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214432 [Multi-domain]  Cd Length: 328  Bit Score: 78.00  E-value: 1.33e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 124 MLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVLLTLGASSSRTRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNfahis 203
Cdd:MTH00144  11 FLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWF----- 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 204 lrmedipdgtrtaIFAVLLVAFAVKAAVFPLSAWLPDSYPTApSMVTAVFAGLLTKVgvyAIIRTRSVVFPDGRLDDVLM 283
Cdd:MTH00144  86 -------------SMSLLLLGLCLKLGLFPFHFWVPSVMAGL-SWLSCFLLLTWQKV---APLFLLSNFLDLYWLAYLLC 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 284 WAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVhhILVQTALFLVVGLIerqagssSL 363
Cdd:MTH00144 149 VISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIV--SSGFLFFSLWSGDS-------GS 219
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 364 RSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAGaqnGSATAWILVAGSIITSLLTL-------YTMILVW 436
Cdd:MTH00144 220 MKDLGSLKPSYKTGLSIISLLLSLGGLPPFLGFCSKLLVLISS---MESSPLLLILLLLLGSLISLffylsvfFSSFLSS 296

                 ....*
gi 740841431 437 SKAFW 441
Cdd:MTH00144 297 SKSKK 301
ND4 MTH00068
NADH dehydrogenase subunit 4; Provisional
114-431 1.44e-15

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214417 [Multi-domain]  Cd Length: 458  Bit Score: 79.19  E-value: 1.44e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 114 EPIS---VFVPTYMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVLLT-LGASSSRTRAGVSYVMVNMLSSMVFLLAIGL 189
Cdd:MTH00068  87 EPINrqrTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITrWGNQEERLNAGTYFLFYTLAGSLPLLIALLI 166
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 190 VYQAVGTVNFAHISLRMEDIPDGTRTAIF-AVLLVAFAVKAAVFPLSAWLPDSY---PTAPSMVtavFAGLLTKVGVYAI 265
Cdd:MTH00068 167 LQNSLGSLSLILLELMSPMQLMTYTNKIWwLACLLAFMVKMPLYGLHLWLPKAHveaPIAGSMI---LAAVLLKLGGYGI 243
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 266 IRTrSVVFPDGRLDDVL------MWAGLATMLMgilgAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVH 339
Cdd:MTH00068 244 LRI-SILLTPLSKELSYpfiilaLWGVLMTSLI----CLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMIS 318
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 340 HILVQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAGAQNGSATAWILVA 419
Cdd:MTH00068 319 HGLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGL 398
                        330
                 ....*....|..
gi 740841431 420 GSIITSLLTLYT 431
Cdd:MTH00068 399 GTLITAAYTLYM 410
ND4 MTH00127
NADH dehydrogenase subunit 4; Provisional
114-430 1.64e-15

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177186 [Multi-domain]  Cd Length: 459  Bit Score: 79.23  E-value: 1.64e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 114 EPIS---VFVPTYMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVLLT-LGASSSRTRAGVSYVMVNMLSSMVFLLAIGL 189
Cdd:MTH00127  88 EPINrqrMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITrWGNQTERLNAGTYFLFYTLAGSLPLLVALLL 167
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 190 VYQAVGTVNFAHISLRMEDIPDGTRTAIF-AVLLVAFAVKAAVFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRT 268
Cdd:MTH00127 168 LQNSTGTLSMLTLQYSQPLQLSSWADKLWwAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRM 247
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 269 RSVVFPdgrLDDVLMWAGLATMLMGIL----GAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQ 344
Cdd:MTH00127 248 MVMLDP---LTKELSYPFIILALWGIImtgsICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTS 324
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 345 TALFLVVGLIERQAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAGAQNGSATAWILVAGSIIT 424
Cdd:MTH00127 325 SALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLIT 404

                 ....*.
gi 740841431 425 SLLTLY 430
Cdd:MTH00127 405 AGYSLY 410
PRK12649 PRK12649
putative monovalent cation/H+ antiporter subunit A; Reviewed
123-446 2.31e-15

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 183649 [Multi-domain]  Cd Length: 789  Bit Score: 79.49  E-value: 2.31e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 123 YMLLNMG--VSMAFlAGDLFNMYVGFEVLLVASYVLLTLGASSSRTRAGVSYVMVNMLSSMVFLLAIGLVYQAV-GTVNF 199
Cdd:PRK12649 116 YLLLFMGsmIGMVF-SGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVItGTYDI 194
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 200 AHISLRMEDIPDGTRTAIFAVLLVAF----AVKAAVFPLSAWLPDSYpTAPSMVTAVF-AGLLTKVGVYAIIRTRSVVFP 274
Cdd:PRK12649 195 ATILQDSELIENIKGHPLFLITLILIfigaAAKSAQGPFYIWLPNAM-EAPTPVSAFLhSATMVKAGVYLVARIHPIFSG 273
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 275 DGRLDDVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMI--FGIAVGNTLGLG--GAIFYIVHHILVQTALFLV 350
Cdd:PRK12649 274 TEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMtmYGYTTYHEPGLGvaAATFHLLNHATFKACLFLV 353
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 351 VGLIERQAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVML----IEAGAQNGSATAWILVAGSIITSL 426
Cdd:PRK12649 354 AGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFyetsVEMGALIGGPFTIIIPAVAVLGGV 433
                        330       340
                 ....*....|....*....|
gi 740841431 427 LTLYTMILVWSKAFWRDRSD 446
Cdd:PRK12649 434 FTFAYSIKLIDGIFLGERTH 453
ndhD CHL00011
NADH dehydrogenase subunit 4
134-352 5.43e-15

NADH dehydrogenase subunit 4


Pssm-ID: 176954 [Multi-domain]  Cd Length: 498  Bit Score: 77.68  E-value: 5.43e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 134 FLAGDLFNMYVGFEVLLVASYVLLTLGASSSRTRAGVSYVMVNMLSSMVFL---LAIGLVYQAVGTVNFAhiSLRMEDIP 210
Cdd:CHL00011 129 FSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYTAGGSIFLLigvLGMGLYGSNEPTLNFE--TLANQSYP 206
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 211 DGTRTAIFAVLLVAFAVKAAVFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRTRSVVFPDGR--LDDVLMWAGLA 288
Cdd:CHL00011 207 VALEILFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHsiFSPWLVIVGAI 286
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 740841431 289 TMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVG 352
Cdd:CHL00011 287 QIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAG 350
ND4 MTH00014
NADH dehydrogenase subunit 4; Validated
119-434 1.53e-14

NADH dehydrogenase subunit 4; Validated


Pssm-ID: 214399 [Multi-domain]  Cd Length: 452  Bit Score: 75.93  E-value: 1.53e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 119 FVPTYMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVL-LTLGASSSRTRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTV 197
Cdd:MTH00014  92 FMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLiLGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSL 171
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 198 NFAHISlrMEDIPDGTRTAIFAVLLVAFAVKAAVFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRTRSVV-FPDG 276
Cdd:MTH00014 172 SMLMSS--MEPPSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRMSSLFmHINK 249
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 277 RLDDVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLIER 356
Cdd:MTH00014 250 SLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSALFALANMTYE 329
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 357 QAGSSSLRSLGSLAKTSPLLALL-YLVPALNLGGiPPFSGFLGKVMLIeAGAQNGSATAWILVAgsiITSLLT-LYTMIL 434
Cdd:MTH00014 330 TTHTRSLFLTKGLLSLFPTMTMWwFLLSAANMAA-PPSINLLSEIMLL-TSILSSSLSTAILLA---ITSFLAaAYSLFL 404
PRK12664 PRK12664
putative monovalent cation/H+ antiporter subunit D; Reviewed
133-399 1.85e-14

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237164 [Multi-domain]  Cd Length: 527  Bit Score: 75.92  E-value: 1.85e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 133 AFLAGDLFNMYVGFEVLLVASYVLLTLGASSSRTRAGVSYVMVNMLSSmvFLLAIGLVYQAVGTvnfahislrmeDIPDG 212
Cdd:PRK12664  79 AISSSSLTLVVIGFEFMALSALMIIAAGCPGGNIGAFIHYACVHFFSG--VLLLVGASGQAQNG-----------QYTGY 145
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 213 TRTAIFAVLLVafavKAAVFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRtrsvvFPDGrlDDVLMWAGLATMLM 292
Cdd:PRK12664 146 CKLLFMLGLLI----NCACFPASSWVVDAYPAASNFGIIVLSLFTTKVAALVLLL-----FFSG--EEILLFLGIITAIY 214
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 293 GILGAMAQNDIKRLLSFTLVSHIGYMIfgIAVG----NTLGLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGS 368
Cdd:PRK12664 215 GIIFASLEQNIRRLLCYNVVGQMGLLI--IAIGfsgsSGVAIGILILQIVLSVVYQTLLFMVADSVINRTRKFNLNRVGG 292
                        250       260       270
                 ....*....|....*....|....*....|.
gi 740841431 369 LAKTsPLLALLYLVPALNLGGIPPFSGFLGK 399
Cdd:PRK12664 293 LFKM-SLEAMCCIIAILNMGAFPGTAGFVSK 322
ND2 MTH00200
NADH dehydrogenase subunit 2; Provisional
117-423 1.14e-13

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177246 [Multi-domain]  Cd Length: 347  Bit Score: 72.31  E-value: 1.14e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 117 SVFVPTYMLLNMGVS--MAFLAGDLFNMYVGFEVLLVASYVLLTLGASSSRTRAGVSYVMVNMLSSMVFLLaiGLVYQAV 194
Cdd:MTH00200   2 SPLILPLFILSLGLGtlLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLF--GGLLNAW 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 195 GTVNFahislrmeDIPDGTRTAIFAVLLVAFAVKAAVFPLSAWLPDSYPTAPSMVTAVfagLLT--KVGVYAIIrtrsVV 272
Cdd:MTH00200  80 TSGQW--------GISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLI---LSTwqKLAPFALL----IQ 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 273 FPDGRLDDVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVG 352
Cdd:MTH00200 145 LAPALNSNILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNS 224
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 740841431 353 LIERQAGSSSLRslgslaktSPLLALLYLVPALNLGGIPPFSGFLGKVM-LIEAGAQNGSATAWILVAGSII 423
Cdd:MTH00200 225 TKINSLSSSKTK--------NPILSMLLGLTLLSLGGLPPLTGFFPKWLiLQELSKQGLFIYATILLLGSLL 288
ND4 MTH00124
NADH dehydrogenase subunit 4; Provisional
114-348 1.88e-13

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214427 [Multi-domain]  Cd Length: 457  Bit Score: 72.54  E-value: 1.88e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 114 EPIS---VFVPTYMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVLLT-LGASSSRTRAGVSYVMVNMLSSMVFLLAIGL 189
Cdd:MTH00124  87 EPLQrkrTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITrWGNQPERLSAGTYFLFYTLISSLPLLIAILY 166
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 190 VYQAVGTVNFAHISLRMEDIPD-GTRTAIFAVLLVAFAVKAAVFPLSAWLPDSY---PTAPSMVtavFAGLLTKVGVYAI 265
Cdd:MTH00124 167 LHNQTGTLSLPMLQLTHPTLTNsWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHveaPIAGSMV---LAAILLKLGGYGI 243
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 266 IRTRSVVFPdgrLDDVLMWAGLATMLMGILGA----MAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHI 341
Cdd:MTH00124 244 IRITLLLPP---LSNTLHYPFLTLALWGALMTslicLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320

                 ....*..
gi 740841431 342 LVQTALF 348
Cdd:MTH00124 321 LTSSMLF 327
ND4 MTH00150
NADH dehydrogenase subunit 4; Provisional
78-434 2.19e-13

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214435 [Multi-domain]  Cd Length: 417  Bit Score: 72.18  E-value: 2.19e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  78 LVADNLAVLMITVSqLVLFAVMWFGIGQGISDGDEDEPISVFVptyMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVL- 156
Cdd:MTH00150  20 FSVDSMSSLLISLS-LWISGLMMLASQKSVKLRNKSSSFSLLV---LLLCLILVLAFSVSSLLMFYFFFEASLIPTLLLi 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 157 LTLGASSSRTRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHIS-LRMEDIPDGTrtaIFAVLLVAFAVKAAVFPLS 235
Cdd:MTH00150  96 LGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISsLRKLLSSMGL---WGLLVFLAFLVKLPMYPFH 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 236 AWLPDSY---PTAPSMVtavFAGLLTKVGVYAIIRtrsvvfpdgrlddVLMWAGLATMLM-----------GILGAMA-- 299
Cdd:MTH00150 173 LWLPKAHveaPVAGSMI---LAGILLKLGGYGILR-------------MMMVFSLSSSSFsiflislslwgGVLTSLIcl 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 300 -QNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLLAL 378
Cdd:MTH00150 237 rQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSL 316
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 740841431 379 LYLV-PALNLgGIPPFSGFLGKVMLIEAGaqnGSATAWILVAGSIITSLLTLYTMIL 434
Cdd:MTH00150 317 WWFLfCIINM-AAPPSLNLLSEIMIFPSL---ISYSPWFFVPLGLMVFLSGLYSLYL 369
PRK06459 PRK06459
hydrogenase 4 subunit B; Validated
121-404 2.44e-13

hydrogenase 4 subunit B; Validated


Pssm-ID: 235806 [Multi-domain]  Cd Length: 585  Bit Score: 72.52  E-value: 2.44e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 121 PTYMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVLLTLGASSSRtrAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFA 200
Cdd:PRK06459  76 SLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKR--PAFVFMAFGELSTVLILAGFAWAFIISGTTNFS 153
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 201 HISLRMEDIpdgtrtaifaVLLVAFAVKAAVFP--LSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRTR--SVVFPDG 276
Cdd:PRK06459 154 YLPSPVPLI----------LASFGFIIKMGMMPflVSEWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTilTQTIPIG 223
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 277 RLDDVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMI--FG--IAVGNTLG------LGGAIFYIVHHILVQTA 346
Cdd:PRK06459 224 YFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILvaLGlyMVTKQLITsiehfsLITVILYSFAHSVAKTG 303
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 740841431 347 LFLVVGLIERQAgssslrSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIE 404
Cdd:PRK06459 304 LFLSSGLQEKQS------ITYSKKIRNRWIELGLTLLASSLSGLLPNIGGVASWLLLE 355
PRK12645 PRK12645
monovalent cation/H+ antiporter subunit A; Reviewed
122-441 4.34e-13

monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237155 [Multi-domain]  Cd Length: 800  Bit Score: 72.27  E-value: 4.34e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 122 TYMLLNMGVSMAFLAGD-LFNMYVGFEVLLVASYVLLTLGASSSRTRAGVSYVM-VNMLSSMVFLLAIGLVYQAVGTVNF 199
Cdd:PRK12645 114 VYLLLFMGAMLGVVLSDnLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMlITVFGGLSMLGGFILLYIMTGSFSI 193
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 200 AHISLRMEDIPDGTrTAIFAVLLV---AFAvKAAVFPLSAWLPDSYpTAPSMVTA-VFAGLLTKVGVYAIIRTrSVVFPd 275
Cdd:PRK12645 194 REMIANADEIQNSP-LFIPAMILIllgAFT-KSAQFPFYIWLPDAM-EAPTPVSAyLHSATMVKAGIYLVARF-TPIFA- 268
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 276 grLDDVLMWA----GLATMLMGILGAMAQNDIKRLLSFTLVSHIGyMI------------FGIAVGN--TLGLGGAIFYI 337
Cdd:PRK12645 269 --GSQVWFWTvtlvGLITLFWGSLNAVKQTDLKGILAFSTVSQLG-LImsllgigaaslhYQGDDSKiyAAAITAAIFHL 345
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 338 VHHILVQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEA-------GAQNG 410
Cdd:PRK12645 346 INHATFKGSLFMIVGIVDHETGTRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESmlnateaNLFSL 425
                        330       340       350
                 ....*....|....*....|....*....|..
gi 740841431 411 SATAWILVAGSIITSLLT-LYTMILVwSKAFW 441
Cdd:PRK12645 426 DTWGVLFPVIAWVASVFTfVYSIIFI-FKTFF 456
ND4 MTH00205
NADH dehydrogenase subunit 4; Provisional
117-348 4.49e-13

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214457 [Multi-domain]  Cd Length: 448  Bit Score: 71.55  E-value: 4.49e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 117 SVFVPTYMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVL-LTLGASSSRTRAGVSYVMVNMLSSMVFLLAIGLVYQAVG 195
Cdd:MTH00205  88 KLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILiLGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNF 167
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 196 TVNFaHISLRMEDIpDGTRTAIFAVLLVAFAVKAAVFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRTRSVVFPD 275
Cdd:MTH00205 168 SLSM-FFNFPLNFS-DFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKL 245
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 740841431 276 GRLDDVL-----MWAGlatMLMGILgAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALF 348
Cdd:MTH00205 246 NSNFSELffsisLWGG---VMTGMI-CLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMF 319
ND5 MTH00032
NADH dehydrogenase subunit 5; Provisional
76-404 2.14e-12

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214407 [Multi-domain]  Cd Length: 669  Bit Score: 69.99  E-value: 2.14e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  76 ITLVADNLAVLMITVSQLVLFAVMWFGIgqgiSDGDEDEPISVFVPTYMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYV 155
Cdd:MTH00032  74 IGLLYDTLSVTMLLVISSISTLVHIYST----SYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYL 149
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 156 LLTLGASSSRT-RAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHISL-----------RMEDIPDGTRTAIFAV--- 220
Cdd:MTH00032 150 LVAFWTTRIQAnKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNGgsvgsgimdrgYYGGGAYESPLAPFAIigi 229
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 221 -LLVAFAVKAAVFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRTrsvvFPdgrlddVLMWAGLATMLMGILGAMA 299
Cdd:MTH00032 230 lLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRS----FP------LFEKAPLTLLIITIFGALT 299
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 300 ----------QNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGgaIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGSL 369
Cdd:MTH00032 300 affaatvglvQNDLKKVIAYSTCSQLGYMVLIIGIEGSHNVG--LFHLVNHAFFKALLFLSAGSVIHSTTVDEQDMRKMG 377
                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 740841431 370 A--KTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIE 404
Cdd:MTH00032 378 GliHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILE 414
ND5 MTH00207
NADH dehydrogenase subunit 5; Provisional
73-437 3.40e-12

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 164753 [Multi-domain]  Cd Length: 572  Bit Score: 69.02  E-value: 3.40e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  73 PIGITLVADNLAVLMITVSQLVLFAVMWFGIgqgiSDGDEDEPISVFVPTYMLLNMGVSMAFLAGDLFNMYVGFEVLLVA 152
Cdd:MTH00207  48 PINFTIILDPTGTLFSSTVLFISANVLLFAK----TYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLV 123
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 153 SYVLLTLGASSSRTRAGVSYVMVNMLSSMVFLLAIGLvyqavgTVNFAHIS-LRMEDIPdgTRTAIFAVLLVAFAVKAAV 231
Cdd:MTH00207 124 SFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGW------TLNQGHWSiTNMWQTD--MNNYIALSIMIAAMTKSAQ 195
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 232 FPLSAWLPDSYpTAPSMVTA-VFAGLLTKVGVYAIIRTRSVVFPDGRLDDVLMWAGLATMLMGILGAMAQNDIKRLLSFT 310
Cdd:MTH00207 196 MPFSSWLPAAM-AAPTPVSAlVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALS 274
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 311 LVSHIGYMIFGIAVGN-TLglggAIFYIVHHILVQTALFLVVG-LIERQAGSSSLRSLGSLAKTSPLLALLYLVPALNLG 388
Cdd:MTH00207 275 TLSQLGVMMASLGLGMpKL----ALFHLITHALFKALLFVCAGsLIHSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALC 350
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|..
gi 740841431 389 GIPPFSGFLGKVMLIEAG---AQNGSATAWILVAGSIITSLLTLYTMILVWS 437
Cdd:MTH00207 351 GSPFLSGFYSKDLILESSlfyPHNSLMILMIFLATALTAAYSTRFTLAVLWS 402
ND2 MTH00198
NADH dehydrogenase subunit 2; Provisional
142-444 4.71e-12

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214454 [Multi-domain]  Cd Length: 607  Bit Score: 68.73  E-value: 4.71e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 142 MYVGFEVLLVASYVLLTLGASSSRT---------RAGVSYVMVNMLSSMVFLLAIGLVYQ------AVGTVNFAHISLRM 206
Cdd:MTH00198 213 IYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGftgnegMLGTILSATLETTN 292
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 207 EDIPDGTRTAIFAVLLVAFAVKAAvfPLSAWLPDSYPTAPSMVTAVFAgLLTKVGVYAIIRTRSVVfpdgrlDDVLMWAG 286
Cdd:MTH00198 293 IELRQGSLGYLFITVAILFKLAAA--PFHMWTPDVYEGAPTPTTALIA-IIPKFTVYILLTSLVIT------SKLLLSVA 363
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 287 LATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLIER---------- 356
Cdd:MTH00198 364 IISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTYLVSALASFTVICTLEEfgtrtptsrq 443
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 357 -------QAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKvmlieagaqngsataWILVAGSI------- 422
Cdd:MTH00198 444 rdgsfgnYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGK---------------WFILVGSIkiafsss 508
                        330       340
                 ....*....|....*....|....
gi 740841431 423 --ITSLLTLYTMILVWSKAFWRDR 444
Cdd:MTH00198 509 lsIYYLVALFAIICTCISAFYYIR 532
ND5 MTH00020
NADH dehydrogenase subunit 5; Reviewed
142-436 5.74e-12

NADH dehydrogenase subunit 5; Reviewed


Pssm-ID: 214400 [Multi-domain]  Cd Length: 610  Bit Score: 68.18  E-value: 5.74e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 142 MYVGFEVLLVASYVLLTLGASS-SRTRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHISLRMEDIPDGTRTAIFAV 220
Cdd:MTH00020 136 LFIGWEGVGLCSYLLINFWLTRiEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFNMVVSAPSSDITLICLF 215
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 221 LLVAFAVKAAVFPLSAWLPDSY--PT-------APSMVTAvfaglltkvGVYAIIRTRSvvfpdgrlddVLMWAGLATML 291
Cdd:MTH00020 216 LFIGAVGKSAQLGLHTWLPDAMegPTpvsalihAATMVTA---------GVFLLIRSSP----------LFEQAPLALII 276
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 292 MGILGA----------MAQNDIKRLLSFTLVSHIGYMIFGIAVGN-TLGLggaiFYIVHHILVQTALFLVVG-LIERQAG 359
Cdd:MTH00020 277 VTIVGSltvffaatvgLVQNDLKKVIAYSTCSQLGYMVVACGLSHySISL----FHLMNHAFFKALLFLSAGsVIHALSD 352
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 740841431 360 SSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIE-AGAQNGSATAWILVAGSIItsLLTLYTMILVW 436
Cdd:MTH00020 353 EQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILElAFGQYYLIFAYWLGCFSAL--LTAFYSIRLIY 428
ND5 MTH00211
NADH dehydrogenase subunit 5; Provisional
130-430 2.16e-11

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214459 [Multi-domain]  Cd Length: 597  Bit Score: 66.51  E-value: 2.16e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 130 VSMAFL--AGDLFNMYVGFEVLLVASYVLLtlGASSSRTRAGVSY---VMVNMLSSMVFLLAIGLVYQAVGTVNFAHISL 204
Cdd:MTH00211 121 IFMLILvsANNLFQLFIGWEGVGIMSFLLI--SWWYGRSDANTAAlqaVIYNRIGDIGLLLSMVWLLLNLNSWEISQLFI 198
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 205 RMEDIpdgtrTAIFAVLLVAFAVKAAVFPLSAWLPDSY--PTAPS-------MVTAvfaglltkvGVYAIIRTRSVVFPD 275
Cdd:MTH00211 199 LNLDL-----TLFLLGLLLAAMGKSAQFGFHPWLPSAMegPTPVSallhsstMVVA---------GVFLLIRLSPLFQNN 264
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 276 GRLDDVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFgiavgnTLGLGG---AIFYIVHHILVQTALFLVVG 352
Cdd:MTH00211 265 QLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMV------TLGLNQpqlAFLHICTHAFFKAMLFMCSG 338
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 353 LI------ERQagsssLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEagAQNGSAT-AWILVAGSIITS 425
Cdd:MTH00211 339 SIihglnnEQD-----IRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILE--SMNGSYLnAWALLLTLLATS 411

                 ....*
gi 740841431 426 LLTLY 430
Cdd:MTH00211 412 LTAAY 416
PRK12648 PRK12648
putative monovalent cation/H+ antiporter subunit A; Reviewed
220-510 3.24e-11

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237157 [Multi-domain]  Cd Length: 948  Bit Score: 66.37  E-value: 3.24e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 220 VLLVAFAvKAAVFPLSAWLPDSYpTAPsmvTAVFAGL----LTKVGVYAIIRTRSVvfpdgrLDDVLMW------AGLAT 289
Cdd:PRK12648 213 ILLGAFT-KSAQFPFHFWLPHAM-AAP---TPVSAYLhsatMVKAGVFLLARLWPV------LAGTEEWfwivggAGLIT 281
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 290 MLMGILGAMAQNDIKRLLSFTLVSHIGY--MIFGIavGNTLGLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLG 367
Cdd:PRK12648 282 LLLGAYFALFQHDLKGLLAYSTISHLGLitLLLGL--GSPLAAVAAIFHIINHATFKASLFMAAGIIDHETGTRDMRRLS 359
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 368 SLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIE--AGAQNGSATAWILVAGSIITSLLTL-YTMILVWSKAFWRDR 444
Cdd:PRK12648 360 GLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFAetLDTHLLGSLDWLLPVAATLAGAFSVaYSLRFIHDVFFGPPP 439
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 445 SDAPegdtvlAQPAalrertqmvaiaerddvgKMPLGMVMPTALLVIASVGVTVL----AGPLSNVATEA 510
Cdd:PRK12648 440 DDLP------KTPH------------------EPPRWMRAPVELLVLLCLLVGIFpaltVGPLLAAAARA 485
ND2 MTH00197
NADH dehydrogenase subunit 2; Provisional
123-430 2.28e-10

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177244 [Multi-domain]  Cd Length: 323  Bit Score: 62.00  E-value: 2.28e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 123 YMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVLLTLGASSSRTRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHI 202
Cdd:MTH00197   4 LFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNLYLSLLSVV 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 203 slrmedipdgtrtaifaVLLVAFAVKAAVFPLSAWLPdSYPTAPSMVTAVFAGLLTKVGVYAIIRTRSVVFpdgrldDVL 282
Cdd:MTH00197  84 -----------------LVILGLLLKLGAFPFHFWVP-SVMESLSWFNCFLLATWQKLAPLLILAFNSSSF------MGL 139
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 283 MWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGlggaIFYIVHHILVQTALFLVVGLIERQAGSSS 362
Cdd:MTH00197 140 LICSVLSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIF----MLYYLIYFVIMFMLFLFLSKNNLSSLNQQ 215
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 740841431 363 LRSLGSLAKTSPLLALLYlvpaLNLGGIPPFSGFLGKVMLIEAGAQNGSataWILVAGSIITSLLTLY 430
Cdd:MTH00197 216 YSNPESMSSNLVFLGLSF----LSLGGLPPLSGFFLKWLILTSLLSSNI---SLITFMLILSTCFSLY 276
ND4 MTH00163
NADH dehydrogenase subunit 4; Provisional
117-354 2.29e-10

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214443 [Multi-domain]  Cd Length: 445  Bit Score: 62.86  E-value: 2.29e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 117 SVFVPTYMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVLLTL-GASSSRTRAGVSYVMVNMLSSMVFLLAIGLVYQAVG 195
Cdd:MTH00163  87 NLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGwGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNSG 166
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 196 TVNFAHISLRMEDIpdgtrTAIFAVLLVAFAVKAAVFPLSAWLPDSYPTAP---SMVtavFAGLLTKVGVYAIIRTRSVV 272
Cdd:MTH00163 167 SLSFFLLNFFGSLN-----FLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPvsgSMI---LAGVLLKLGGYGLLRVMSFF 238
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 273 FpdgrldDVLMWAGLATMLMGILGA-------MAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQT 345
Cdd:MTH00163 239 S------KLGLKFNYIWISISLVGGvivslicLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSS 312

                 ....*....
gi 740841431 346 ALFLVVGLI 354
Cdd:MTH00163 313 GLFCLANII 321
ND5 MTH00210
NADH dehydrogenase subunit 5; Provisional
142-404 2.31e-10

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177253 [Multi-domain]  Cd Length: 616  Bit Score: 63.10  E-value: 2.31e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 142 MYVGFEVLLVASYVLLTL-GASSSRTRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHISLRMEDIPDGTRTAIFAV 220
Cdd:MTH00210 136 LFIGWEGVGLCSYLLINFwLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESLTIICL 215
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 221 LLVAFAV-KAAVFPLSAWLPDSY--PT-------APSMVTAvfaglltkvGVYAIIRTrsvvfpdgrlDDVLMWAGLATM 290
Cdd:MTH00210 216 LLFIGAVgKSAQLGLHTWLPDAMegPTpvsalihAATMVTA---------GVFLIIRS----------GPLFEGSPLALT 276
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 291 LMGILGAMA----------QNDIKRLLSFTLVSHIGYMIFGIAVGNtlgLGGAIFYIVHHILVQTALFLVVG-LIERQAG 359
Cdd:MTH00210 277 IVTILGALTaffaatvgvvQNDLKKVIAYSTCSQLGYMVMVCGISN---YSTSLFHLMNHAFFKALLFLSAGsVIHAVSD 353
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 740841431 360 SSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIE 404
Cdd:MTH00210 354 EQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILE 398
ND4 MTH00110
NADH dehydrogenase subunit 4; Provisional
125-433 7.47e-09

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177172 [Multi-domain]  Cd Length: 459  Bit Score: 57.98  E-value: 7.47e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 125 LLNMGVSMAFLAGDLFNMYVGFEVLLVASYVLLT-LGASSSRTRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTVNFAHIS 203
Cdd:MTH00110 101 LLQLFLIMTFTATELIMFYILFEATLIPTLIIITrWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNNLGSLNFLLLQ 180
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 204 LRMEDIPDGTRTAI--FAVLLvAFAVKAAVFPLSAWLPDSY---PTAPSMVtavFAGLLTKVGVYAIIR--------TRS 270
Cdd:MTH00110 181 LWAQPLPNSWSNNLlwLACMM-AFMVKMPLYGLHLWLPKAHveaPIAGSMV---LAAILLKLGGYGMMRitiilnplTEF 256
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 271 VVFPDGRLDdvlMWAglatMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALF-- 348
Cdd:MTH00110 257 MAYPFLMLS---LWG----MIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFcl 329
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 349 --------------LVVGLierQAGSsslrslgslaktsPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAGAQNGSATA 414
Cdd:MTH00110 330 ansnyerihsrtmiLARGL---QTLL-------------PLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITI 393
                        330
                 ....*....|....*....
gi 740841431 415 WILVAGSIITSLLTLYTMI 433
Cdd:MTH00110 394 ILMGLNMLITALYSLYMLI 412
ND5 MTH00151
NADH dehydrogenase subunit 5; Provisional
117-404 1.77e-08

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214436 [Multi-domain]  Cd Length: 565  Bit Score: 57.16  E-value: 1.77e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 117 SVFVPTYMLLNMG--VSMAFL--AGDLFNMYVGFEVLLVASYVLLTLGASSSRTRAGVSYVMVNMLSSMVFLLAIGLVyq 192
Cdd:MTH00151  81 DPFLKRFMWLVMLfvLSMNLLifIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALL-- 158
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 193 avgtVNFAHISLrmeDIPDGTRTAIFAVLLVAFA--VKAAVFPLSAWLPDSYpTAPSMVTA-VFAGLLTKVGVYAIIR-- 267
Cdd:MTH00151 159 ----VLLGHWSI---LSMWDFKLSGWLGLLLVLAamTKSAQIPFSSWLPAAM-AAPTPVSAlVHSSTLVTAGVFLLIRff 230
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 268 ---TRSVVFpdgrlDDVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFgiavgnTLGLGG---AIFYIVHHI 341
Cdd:MTH00151 231 pflSSSSGF-----SSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMF------SLGLGMpslALFHLYTHA 299
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 740841431 342 LVQTALFLVVG-LIERQAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIE 404
Cdd:MTH00151 300 LFKALLFLCAGsIIHSSSGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILE 363
ndhF CHL00025
NADH dehydrogenase subunit 5
217-349 1.90e-08

NADH dehydrogenase subunit 5


Pssm-ID: 214338 [Multi-domain]  Cd Length: 741  Bit Score: 57.21  E-value: 1.90e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 217 IFAVLLVAFAV-KAAVFPLSAWLPDSY--PT-------APSMVTAvfaglltkvGVYAIIRtrsvVFPdgrLDDVL---M 283
Cdd:CHL00025 228 LCAFLLFLGPVaKSAQFPLHVWLPDAMegPTpisalihAATMVAA---------GIFLVAR----LLP---LFIVIpyiM 291
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 740841431 284 ----WAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGiavgntLGLGG---AIFYIVHHILVQTALFL 349
Cdd:CHL00025 292 nlisLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLA------LGIGSyraALFHLITHAYSKALLFL 358
ND2 MTH00160
NADH dehydrogenase subunit 2; Provisional
123-430 7.81e-08

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214442 [Multi-domain]  Cd Length: 335  Bit Score: 54.44  E-value: 7.81e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 123 YMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVLLTLGASSSRTRAGVSYVMVNMLSSMVFLLAIgLVYQAVGTVNFAHI 202
Cdd:MTH00160  11 LSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSI-ILNMLNLMLFNNIS 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 203 SLrmedipdgtrtaifaVLLVAFAVKAAVFPLSAWLPDSYPTAPSMVTAVfagLLT--KVGVYAIIrtrSVVFPDGrldd 280
Cdd:MTH00160  90 SM---------------LINSSLLLKLGAAPFHFWFPEVMEGLSWINCFI---LMTwqKIAPLILL---SYLINNN---- 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 281 VLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLggaIFYIVHHILVqtaLFLVVGLIERQAGS 360
Cdd:MTH00160 145 FIIIIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWL---IYFLIYSIIS---LSIILLFNKFNIFF 218
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 361 SSLRSLGSlaKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAGAQNGSaTAWILVAgsIITSLLTLY 430
Cdd:MTH00160 219 LNQLFNSN--NKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNM-FFLLFIL--IMSSLITLY 283
ND2 MTH00041
NADH dehydrogenase subunit 2; Validated
220-430 1.02e-07

NADH dehydrogenase subunit 2; Validated


Pssm-ID: 177116 [Multi-domain]  Cd Length: 349  Bit Score: 54.17  E-value: 1.02e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 220 VLLVAFAVKAAVFPLSAWLPDSYPTAPSMVTAVFAgLLTKVGVYAIIrtrsVVFPDGRLDDVLMWAGLATMLMGILGAMA 299
Cdd:MTH00041  97 IITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIA-TWQKIAPLILL----ISISNLLNSNILILCGILSVLVGGWGGLN 171
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 300 QNDIKRLLSFTLVSHIGYMIfgIAVGNTLGLGGAIFYIvhHILVQTALFlvvgLIERQAGSSSLRSLGSLAKTSPLLALL 379
Cdd:MTH00041 172 QTQTRKILAFSSIAHLGWII--ITSAYSPNASIIMFLI--YIIINTSIF----LIGNNFSLSTLSHLNKLSQLNPISAFL 243
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 740841431 380 YLVPALNLGGIPPFSGFLGKVMLIEAGAQNGSataWILVAGSIITSLLTLY 430
Cdd:MTH00041 244 FILSILSLGGLPPLTGFLNKFISLYCLIQNNS---ILISIILIIGSLLSLF 291
ND2 MTH00011
NADH dehydrogenase subunit 2; Validated
121-423 1.65e-07

NADH dehydrogenase subunit 2; Validated


Pssm-ID: 164587 [Multi-domain]  Cd Length: 330  Bit Score: 53.24  E-value: 1.65e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 121 PTYML----LNMGVSMAFLAGDLFNMYVGFEVLLVASYVLLTLGASSSRTRAGVSYVMVNMLSSMVFLLAIGLVYQAvgt 196
Cdd:MTH00011   6 PTMFLfsstMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWSF--- 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 197 vnfahislrmediPDGTRTAIFAVLLVAFAVKAAVFPLSAWlpdsYPTAPSMVTAVFAGLLTKVGVYAIIRTRSVVFPDG 276
Cdd:MTH00011  83 -------------PSLLKNITALMLLVSLMLKLGMAPCHFW----FPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHN 145
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 277 RLDDVLMWAGLATMLMGILGAMaQNDIKRLLSFTLVSHIGYMIFGIAVGNTLglggAIFYIVHHILVQTALFLVVGlier 356
Cdd:MTH00011 146 ILPMMTSMAAMSALAGGLGGMN-QTQLRPLLAYSSIGHMGWMTMISVFSPSM----AILYFMTYIIITTPLMLLFA---- 216
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 740841431 357 QAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAGAQNGSATAWI-LVAGSII 423
Cdd:MTH00011 217 YLNAFSTKFNSKISSMSQTTSMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLvLIVGSLM 284
ND4 MTH00094
NADH dehydrogenase subunit 4; Provisional
217-403 1.13e-06

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177157 [Multi-domain]  Cd Length: 403  Bit Score: 51.06  E-value: 1.13e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 217 IFAVLLVAFAVKAAVFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRTrsVVFPDGRLDDVLMWAGLATMLMGILG 296
Cdd:MTH00094 153 MFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRI--LGSLNFVYNNFWIIFSLLGMILSSFC 230
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 297 AMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLL 376
Cdd:MTH00094 231 CVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFF 310
                        170       180
                 ....*....|....*....|....*..
gi 740841431 377 ALLYLVPALNLGGIPPFSGFLGKVMLI 403
Cdd:MTH00094 311 GLIFSLVFLSNSGVPPSLSFFSEFLII 337
ND5 MTH00095
NADH dehydrogenase subunit 5; Provisional
123-354 6.96e-06

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177158 [Multi-domain]  Cd Length: 527  Bit Score: 48.76  E-value: 6.96e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 123 YMLLNMGV-SMAFL--AGDLFNMYVGFEVLLVASYVL-LTLGASSSRTRAgVSYVMVNMLSSM-VFLLAIGLVYQAVGTV 197
Cdd:MTH00095  79 YFVLLIFVgSMFMLnfSNSVFTMLLSWDLLGISSFFLvLFYNNWDSNSGA-MNTALTNRIGDFfIFLFFSGFIFSSYYFF 157
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 198 NFAHISLRMedipdgtrtaIFAVLLVAFaVKAAVFPLSAWLPDSYpTAPSMVTA-VFAGLLTKVGVYAIIRTRSVVFpDG 276
Cdd:MTH00095 158 SFSFFSSSM----------ILMLLLTSF-TKSAQFPFSSWLPKAM-SAPTPVSSlVHSSTLVTAGLILLMNFSYLIL-NM 224
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 277 RLDDVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFgiavgnTLGLGGAIFYIVH---HILVQTALFLVVGL 353
Cdd:MTH00095 225 NVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSML------TFGSGLSFVSFIHllsHALFKSCLFMQVGY 298

                 .
gi 740841431 354 I 354
Cdd:MTH00095 299 L 299
ND4 MTH00062
NADH dehydrogenase subunit 4; Provisional
40-349 1.10e-05

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214413 [Multi-domain]  Cd Length: 417  Bit Score: 48.00  E-value: 1.10e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431  40 LFSLGSLLGVA-SALVYLIYAHGVHTVQVGGWDAPIGItLVADNLAVLMITVSQL--VLFAVMWFGIgqgisdgdedepI 116
Cdd:MTH00062   3 FFSVGFFLGFLlLLLFCLLYSSGVGCCILVVNNVFNGL-FIFDSLSFYLILLVLFlgLYSQVMFYNL------------L 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 117 SVFVPTYMLLNMGVSM-AFLAGDLFNMYVGFEV-LLVASYVLLTLGASSSRTRAG---VSYVMVNMLSSMVFLLAIGLVY 191
Cdd:MTH00062  70 SGVSRFFLFLSLIFSIlCFCVNNSLLFWFFYELsIIPLLYLLFSESPYSERYLASwyfLGYLLLTSLPLLLCLLYLSLVN 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 192 qavGTVNFahislRMEDIPDGTRTAIFAVLLVAFAVKAAVFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRTRSV 271
Cdd:MTH00062 150 ---GSFNF-----SDWGSDDSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGF 221
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 740841431 272 VFPDGRLDDVLMWAGLATMLMgiLGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVHHILVQTALFL 349
Cdd:MTH00062 222 IFSGSFLGYLFLCCLFSVFFL--ITACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFL 297
PRK06588 PRK06588
putative monovalent cation/H+ antiporter subunit D; Reviewed
135-355 1.65e-05

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 168619 [Multi-domain]  Cd Length: 506  Bit Score: 47.47  E-value: 1.65e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 135 LAGDLFNMYVGFEVLLVASYVLLTLGasSSRTRAGVSYVMVNMLSSMVFLLAIGLVYQAVGtvNFAHISLrMEDIPDGTR 214
Cdd:PRK06588  66 FAADFISMIISLEFMTIFACIIIFCD--QLKIKPARQYFLTHLFSSGLILIGMTLLIQTTS--NTAFTSL-TESVNNFEL 140
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 215 TAIFavLLVAFAVKAAVFPLSAWLPDSYPTAPSMVTAVFAGLLTKVGVYAIIRTRSVVfpdgrldDVLMWAGLATMLMGI 294
Cdd:PRK06588 141 PAIF--ILAGCLINASAIFVNGWVVNCYPIASSSGIVYLISFTTKVTLIIILKLFSGL-------EILKFFGISMIIYGL 211
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 740841431 295 LGAMAQNDIKRLLSFTLVSHIGYMIFGIAVgNTLGLGGAI-FYIVHHILVQTALFLVVGLIE 355
Cdd:PRK06588 212 VFSLIEKNLKRLICYLTVSQLGFILAAISI-NSPNIAYLItSFIFIHILYNGLFALYFAYIE 272
ND2 MTH00105
NADH dehydrogenase subunit 2; Provisional
118-430 1.88e-05

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177167 [Multi-domain]  Cd Length: 347  Bit Score: 47.15  E-value: 1.88e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 118 VFVPTYMLLNMGVSMAFLAGDLFNMYVGFEVLLVASYVLLTLGASSSRTRAGVSYVMVNMLSSMVFLLAIGLVYQAVGTV 197
Cdd:MTH00105   5 ILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMYSGQW 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 198 NFAHISLRMEDIpdgtrtaifaVLLVAFAVKAAVFPLSAWLPD---SYPTAPSMVtavfagLLT--KVGVYAIIrtrSVV 272
Cdd:MTH00105  85 TITKLTNPTAST----------LMTIALAMKLGLAPFHFWVPEvtqGIPLSSGMI------LLTwqKLAPLSIL---YQI 145
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 273 FPDGRLDdVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLglggAIFYIVHHILVQTALFLVVG 352
Cdd:MTH00105 146 SPSINPN-LLLTLAILSILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTL----TLLNLLIYIIMTLTMFMLLM 220
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 740841431 353 LierqAGSSSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAGAQNGSATAWILVAgsiITSLLTLY 430
Cdd:MTH00105 221 L----NSSTTTLSLSHTWNKTPLMTSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMA---ITALLNLY 291
ND5 MTH00165
NADH dehydrogenase subunit 5; Provisional
217-404 4.30e-05

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 46.29  E-value: 4.30e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 217 IFAVLLVAFAvKAAVFPLSAWLPD--SYPTAPS-------MVTAvfaglltkvGVYAIIRTrSVVFPDGRLDDVLMWAGL 287
Cdd:MTH00165 183 GLLIMLAAMT-KSAQIPFSSWLPAamAAPTPVSalvhsstLVTA---------GVYLLIRF-NNLLFSSFFSKFLLLISL 251
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 288 ATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLgLggAIFYIVHHILVQTALFLVVGLIE---------Rqa 358
Cdd:MTH00165 252 LTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPK-L--AFFHLLTHALFKALLFLCAGSIIhnmsnsqdiR-- 326
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 740841431 359 gssslrSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIE 404
Cdd:MTH00165 327 ------FMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILE 366
ND2 MTH00112
NADH dehydrogenase subunit 2; Provisional
281-430 6.42e-05

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214423 [Multi-domain]  Cd Length: 346  Bit Score: 45.20  E-value: 6.42e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 281 VLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLggAIFYIvhHILVQTALFLVVGLIErqagS 360
Cdd:MTH00112 153 LLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTL--LTFYI--YILMTTPMFLTLNTTS----T 224
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 740841431 361 SSLRSLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLI-EAGAQNGSATAWILVagsiITSLLTLY 430
Cdd:MTH00112 225 KTLKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILqELTKQNMTPTATIMA----MLSLLSLF 291
PRK08601 PRK08601
NADH dehydrogenase subunit 5; Validated
131-357 1.34e-04

NADH dehydrogenase subunit 5; Validated


Pssm-ID: 236310 [Multi-domain]  Cd Length: 509  Bit Score: 44.64  E-value: 1.34e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 131 SMAFLAGDLFNMYVGFEVLLVASYVLLTLGASSSRTRAGVSYV-MVNMLSSMVFLLAIGLVYQAVG----TVNFAHISLR 205
Cdd:PRK08601 117 SLAWLSGDLRLMALCWGATLLGLTLLIGLNKGWKVAREAAKISgMLFLISWLALALAIVWLFIATGewqlTSVLSNENLA 196
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 206 MedIPDGTRTAIFAVLLVAFAVKAAVFPLSAWLPDSyPTAPSMVTAVF-AGLltkVGVYAIIRTR-SVVFPDGRLDDVLM 283
Cdd:PRK08601 197 Q--LGTWEKTGINLLLILAVMIPAAQWPFQRWLIES-AVAPTPVSAIMhAGL---VNAGGIMLTRfSPLFHDDIAQILLL 270
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 740841431 284 WAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGntlGLGGAIFYIVHHILVQTALFLVVGLIERQ 357
Cdd:PRK08601 271 IFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFMLVQCALG---AYSAAIIHLILHGLFKATLFLQSGSAVPR 341
ND2 MTH00070
NADH dehydrogenase subunit 2; Provisional
282-442 3.02e-04

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177142 [Multi-domain]  Cd Length: 346  Bit Score: 43.37  E-value: 3.02e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 282 LMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIvhhiLVQTALFLVVGLIerqAGSS 361
Cdd:MTH00070 154 LIIMGLLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYL----IMTSSMFLMLMNL---NSTN 226
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 362 SLRSLGSLAKTSPLLALLYLVpALNLGGIPPFSGFLGKVMLI-EAGAQNGSATAWILvagsIITSLLTL-------YTMI 433
Cdd:MTH00070 227 INKLSSSWSKNPTLTSMMMLT-LLSLGGLPPTTGFIPKWLILqELTKQNLTTLATLM----ALSALLSLffylrlsYAMS 301
                        170
                 ....*....|....*
gi 740841431 434 LVW------SKAFWR 442
Cdd:MTH00070 302 LTTspntsnSKLYWR 316
ND2 MTH00135
NADH dehydrogenase subunit 2; Provisional
286-445 1.46e-03

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177193 [Multi-domain]  Cd Length: 347  Bit Score: 40.94  E-value: 1.46e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 286 GLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLGLGGAIFYIVhhilVQTALFLVVGLIerqAGSSSLRS 365
Cdd:MTH00135 157 GLTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYII----MTSSAFLTFKLN---SSTKINTL 229
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 366 LGSLAKTSPLLALLYLVpALNLGGIPPFSGFLGKVMLI-EAGAQNGSATAWILvagsIITSLLTL-------YTMILVWS 437
Cdd:MTH00135 230 ATSWTKAPALTALTPLI-LLSLGGLPPLTGFMPKWLILqELTKQDLPLTATLA----ALSALLSLyfylrlsYAMTLTIS 304
                        170
                 ....*....|....
gi 740841431 438 ------KAFWRDRS 445
Cdd:MTH00135 305 pntlngTTPWRLPS 318
ND5 MTH00208
NADH dehydrogenase subunit 5; Provisional
179-428 1.98e-03

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177251 [Multi-domain]  Cd Length: 628  Bit Score: 41.11  E-value: 1.98e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 179 SSMVFLLAIGLVYqaVGTVNFAHISLRMEDIPDGTRTAIFAVLLVAfAVKAAVFPLSAWLPDSY--PTAPS-------MV 249
Cdd:MTH00208 203 IGIILFLSLSLIN--FNSWNLNEILSLNNSNSFLINILLFGILLAA-AGKSAQFGLHPWLPAAMegPTPVSallhsstMV 279
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 250 TAvfaglltkvGVYAIIRTRSVVFPDGRLDDVLMWAGLATMLMGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAVGNTLg 329
Cdd:MTH00208 280 VA---------GVFLLIRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPN- 349
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 330 lgGAIFYIVHHILVQTALFLVVGLI-----ERQAGSSSLRSLGSLAKTSPLLALlylvPALNLGGIPPFSGFLGKVMLIE 404
Cdd:MTH00208 350 --LALFHICTHAFFKAMLFLCSGSIihslnNEQDLRKMGGLSFLLPVTSSCIIL----GSLALMGTPFLAGFYSKDLILE 423
                        250       260
                 ....*....|....*....|....
gi 740841431 405 AGAQNGSATAWILVAgsIITSLLT 428
Cdd:MTH00208 424 AGLASISNLLSIILA--LIATLLT 445
PRK07390 PRK07390
NAD(P)H-quinone oxidoreductase subunit F; Validated
228-441 4.16e-03

NAD(P)H-quinone oxidoreductase subunit F; Validated


Pssm-ID: 236008 [Multi-domain]  Cd Length: 613  Bit Score: 39.89  E-value: 4.16e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 228 KAAVFPLSAWLpDSYPTAPSMVTAVFAGLLTKVGVYAIIRTRSVVFPDGRLDDVLMWAGLATMLMGILGAMAQNDIKRLL 307
Cdd:PRK07390 234 KCAQFPLHLWL-DEAMEGPNPASILRNSVVVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRAL 312
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 308 SFTLVSHIGyMIFgIAVGnTLGLGGAIFYIVHHILVQTALFLVVGLIERQAGSSSLRSLGSLAKTSPLLALLYLVPALNL 387
Cdd:PRK07390 313 SYSTSAYLG-LVF-IAVG-LQQPDIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGL 389
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 740841431 388 GGIPPFSGFLGKVMLIEagaqNGSATAWILVAGSIITSLLTLYTMILVWSKAFW 441
Cdd:PRK07390 390 VALLPLGGFWALLRLAD----GLWAVSPWLVGVLLLVNALTAFNLTRVFRLVFL 439
ND5 MTH00108
NADH dehydrogenase subunit 5; Provisional
221-432 5.97e-03

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177170 [Multi-domain]  Cd Length: 602  Bit Score: 39.45  E-value: 5.97e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 221 LLVAFAVKAAVFPLSAWLPDSY--PTAPS-------MVTAvfaglltkvGVYAIIRTRSVVFPDGRLDDVLMWAGLATML 291
Cdd:MTH00108 216 LLLAATGKSAQFGLHPWLPSAMegPTPVSallhsstMVVA---------GVFLLIRFHPLMENNKTIQTLTLCLGAITTL 286
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740841431 292 MGILGAMAQNDIKRLLSFTLVSHIGYMIFgiavgnTLGLGG---AIFYIVHHILVQTALFLVVGLI------E---RQag 359
Cdd:MTH00108 287 FTAICALTQNDIKKIVAFSTSSQLGLMMV------TIGINQphlAFLHICTHAFFKAMLFMCSGSIihnlndEqdiRK-- 358
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 740841431 360 ssslrsLGSLAKTSPLLALLYLVPALNLGGIPPFSGFLGKVMLIEAGaqNGSAT-AWILVAGSIITSLLTLYTM 432
Cdd:MTH00108 359 ------MGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAA--NTSYTnAWALLITLIATSLTAAYST 424
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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