NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|742424313|ref|WP_038903417|]
View 

transaldolase [Dickeya zeae]

Protein Classification

transaldolase( domain architecture ID 10793634)

transaldolase transfers a C3 ketol fragment from a ketose donor to an aldose acceptor as part of the non-oxidative branch of the pentose phosphate pathway

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
PRK12346 PRK12346
transaldolase A; Provisional
1-316 0e+00

transaldolase A; Provisional


:

Pssm-ID: 183458  Cd Length: 316  Bit Score: 690.69  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313   1 MNQLDALKQFTVVVADSGDIESIRHFSPQDATTNPSLILKAASLPAYQSLFADALAYARQQGGSKETQLINASDRLAVNI 80
Cdd:PRK12346   1 MNQLDGIKQFTTVVADSGDIESIRHYHPQDATTNPSLLLKAAGLPQYQHLIDDAIAWGKKQGGTQEQQVVAACDKLAVNF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313  81 GTEILNSIPGRVSTEVDARLSFDRGMCVAKARKLIAMYEEKDIHRSRILIKLAATWEGICAAEELEKEGINCNLTLLFSF 160
Cdd:PRK12346  81 GAEILKSVPGRVSTEVDARLSFDREKSIEKARHLVDLYQQQGIDKSRILIKLASTWEGIRAAEELEKEGINCNLTLLFSF 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313 161 AQARACAEAGVYLISPFVGRIYDWYQARQPSADYNAEQDPGVLSVRRIYEYYKQHRYRTIVMGASFRKVEQILALAGCDR 240
Cdd:PRK12346 161 AQARACAEAGVFLISPFVGRIYDWYQARKPMDPYVVEEDPGVKSVRNIYDYYKQHRYETIVMGASFRRTEQILALAGCDR 240
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 742424313 241 LTIAPALLEQLKNSTAPVERRLSPSTEGYHQPAPLSETEFRWQHNQDPMAVEKLSEGIRLFAADQQKLEDLLAAQL 316
Cdd:PRK12346 241 LTISPNLLKELQESESPVERKLIPSSQTFPRPAPMSEAEFRWEHNQDAMAVEKLSEGIRLFAVDQRKLEDLLAAKL 316
 
Name Accession Description Interval E-value
PRK12346 PRK12346
transaldolase A; Provisional
1-316 0e+00

transaldolase A; Provisional


Pssm-ID: 183458  Cd Length: 316  Bit Score: 690.69  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313   1 MNQLDALKQFTVVVADSGDIESIRHFSPQDATTNPSLILKAASLPAYQSLFADALAYARQQGGSKETQLINASDRLAVNI 80
Cdd:PRK12346   1 MNQLDGIKQFTTVVADSGDIESIRHYHPQDATTNPSLLLKAAGLPQYQHLIDDAIAWGKKQGGTQEQQVVAACDKLAVNF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313  81 GTEILNSIPGRVSTEVDARLSFDRGMCVAKARKLIAMYEEKDIHRSRILIKLAATWEGICAAEELEKEGINCNLTLLFSF 160
Cdd:PRK12346  81 GAEILKSVPGRVSTEVDARLSFDREKSIEKARHLVDLYQQQGIDKSRILIKLASTWEGIRAAEELEKEGINCNLTLLFSF 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313 161 AQARACAEAGVYLISPFVGRIYDWYQARQPSADYNAEQDPGVLSVRRIYEYYKQHRYRTIVMGASFRKVEQILALAGCDR 240
Cdd:PRK12346 161 AQARACAEAGVFLISPFVGRIYDWYQARKPMDPYVVEEDPGVKSVRNIYDYYKQHRYETIVMGASFRRTEQILALAGCDR 240
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 742424313 241 LTIAPALLEQLKNSTAPVERRLSPSTEGYHQPAPLSETEFRWQHNQDPMAVEKLSEGIRLFAADQQKLEDLLAAQL 316
Cdd:PRK12346 241 LTISPNLLKELQESESPVERKLIPSSQTFPRPAPMSEAEFRWEHNQDAMAVEKLSEGIRLFAVDQRKLEDLLAAKL 316
Transaldolase_TalAB cd00957
Transaldolases including both TalA and TalB; Transaldolases including both TalA and TalB. The ...
2-312 0e+00

Transaldolases including both TalA and TalB; Transaldolases including both TalA and TalB. The enzyme catalyses the reversible transfer of a dyhydroxyacetone moiety, derived from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. The catalytic mechanism is similar to other class I aldolases. The enzyme is found in the non-oxidative branch of the pentose phosphate pathway and forms a dimer in solution.


Pssm-ID: 188644 [Multi-domain]  Cd Length: 313  Bit Score: 541.05  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313   2 NQLDALKQFTVVVADSGDIESIRHFSPQDATTNPSLILKAASLPAYQSLFADALAYARQQGGSKETQLINASDRLAVNIG 81
Cdd:cd00957    1 NQLDQLKKFTTIVADTGDFEAIKKFKPQDATTNPSLILAAAKLPEYNKLVDEAIAYAKKKGGSDEDQISNALDKLLVNFG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313  82 TEILNSIPGRVSTEVDARLSFDRGMCVAKARKLIAMYEEKDIHRSRILIKLAATWEGICAAEELEKEGINCNLTLLFSFA 161
Cdd:cd00957   81 TEILKLIPGRVSTEVDARLSFDTNATIAKARKLIKLYEEAGIDKERILIKIAATWEGIQAAKQLEKEGIHCNLTLLFSFA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313 162 QARACAEAGVYLISPFVGRIYDWYQARQPSADYNAEQDPGVLSVRRIYEYYKQHRYRTIVMGASFRKVEQILALAGCDRL 241
Cdd:cd00957  161 QAVACAEAGVTLISPFVGRILDWYKKHSGDKAYTAEEDPGVASVKKIYNYYKKFGYKTKVMGASFRNIGQILALAGCDYL 240
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 742424313 242 TIAPALLEQLKNSTAPVERRLSP--STEGYHQPAPLSETEFRWQHNQDPMAVEKLSEGIRLFAADQQKLEDLL 312
Cdd:cd00957  241 TISPALLEELKNSTAKVERKLDPaaSKALDIHPNFLDESAFRWALNEDAMAVEKLSEGIRGFAKDAVKLEKLI 313
talAB TIGR00874
transaldolase; This family includes the majority of known and predicted transaldolase ...
2-316 0e+00

transaldolase; This family includes the majority of known and predicted transaldolase sequences, including E. coli TalA and TalB. It excluded two other families. The first includes E. coli transaldolase-like protein TalC. The second family includes the putative transaldolases of Helicobacter pylori and Mycobacterium tuberculosis. [Energy metabolism, Pentose phosphate pathway]


Pssm-ID: 162081  Cd Length: 317  Bit Score: 536.27  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313    2 NQLDALKQFTVVVADSGDIESIRHFSPQDATTNPSLILKAASLPAYQSLFADALAYARQQGGSKETQLINASDRLAVNIG 81
Cdd:TIGR00874   1 NQLDQLKQFTVVVADTGDIEAIKKYQPQDATTNPSLILAAAQLPKYAELIDEAVAWGKKQGKDDAQQVENALDKLAVNFG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313   82 TEILNSIPGRVSTEVDARLSFDRGMCVAKARKLIAMYEEKDIHRSRILIKLAATWEGICAAEELEKEGINCNLTLLFSFA 161
Cdd:TIGR00874  81 LEILKIVPGRVSTEVDARLSFDTEATVEKARHLIKLYEDAGVDKKRILIKIASTWEGIRAAEELEKEGIHCNLTLLFSFV 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313  162 QARACAEAGVYLISPFVGRIYDWYQARQPSADYNAEQDPGVLSVRRIYEYYKQHRYRTIVMGASFRKVEQILALAGCDRL 241
Cdd:TIGR00874 161 QAIACAEAKVTLISPFVGRILDWYKAATGKKEYSIEEDPGVASVKKIYNYYKKHGYPTEVMGASFRNKEEILALAGCDRL 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 742424313  242 TIAPALLEQLKNSTAPVERRLSPSTE--GYHQPAPLSETEFRWQHNQDPMAVEKLSEGIRLFAADQQKLEDLLAAQL 316
Cdd:TIGR00874 241 TISPALLDELKESTGPVERKLDPESAkkVDKQPIILDESEFRFLHNEDAMATEKLAEGIRKFAADQEKLEKLLEEKL 317
TAL_FSA pfam00923
Transaldolase/Fructose-6-phosphate aldolase; Transaldolase (TAL) is an enzyme of the pentose ...
13-312 2.05e-99

Transaldolase/Fructose-6-phosphate aldolase; Transaldolase (TAL) is an enzyme of the pentose phosphate pathway (PPP) found almost ubiquitously in the three domains of life (Archaea, Bacteria, and Eukarya). TAL shares a high degree of structural similarity and sequence identity with fructose-6-phosphate aldolase (FSA). They both belong to the class I aldolase family. Their protein structures have been revealed.


Pssm-ID: 395737 [Multi-domain]  Cd Length: 226  Bit Score: 291.75  E-value: 2.05e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313   13 VVADSGDIESIRHFSP----QDATTNPSLILKAASlpaYQSLFADALAYARQQGgsketqlinasdrlavnigteilnsi 88
Cdd:pfam00923   1 IWLDTADRDLIKKLIEeggiDGVTTNPSIFLKAIE---YSALYDEAIAEIKEIG-------------------------- 51
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313   89 PGRVSTEVDARLSFDRGMCVAKARKLIAMYEekdihRSRILIKLAATWEGICAAEELEKEGINCNLTLLFSFAQARACAE 168
Cdd:pfam00923  52 DGPVSLEVDPRLADDTEGTIEEARRLIALYG-----RPNVLIKIPATWEGIKAIKELSAEGINVNVTLIFSLAQALAAAE 126
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313  169 AGVYLISPFVGRIYDWYQARQPSAdynAEQDPGVLSVRRIYEYYKQHRYRTIVMGASFRKVEQILALAGCDRLTIAPALL 248
Cdd:pfam00923 127 AGASVISPFVGRIDDWGDKRLGAA---LRGDDGIANAKEIYQIYKKYGWSTGVLAASFRNVLYVLALAGCDTITIPPDTL 203
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 742424313  249 EQLKNstapverrlspstegyhqpaplsetefrwqhnqdpmaveklSEGIRLFAADQQKLEDLL 312
Cdd:pfam00923 204 EALAK-----------------------------------------DEGVRKFAKDWEKLLGSI 226
TalA COG0176
Transaldolase/fructose-6-phosphate aldolase [Carbohydrate transport and metabolism]; ...
11-308 1.01e-76

Transaldolase/fructose-6-phosphate aldolase [Carbohydrate transport and metabolism]; Transaldolase/fructose-6-phosphate aldolase is part of the Pathway/BioSystem: Pentose phosphate pathway


Pssm-ID: 439946 [Multi-domain]  Cd Length: 214  Bit Score: 233.43  E-value: 1.01e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313  11 TVVVADSGDIESIR----HFSPQDATTNPSLILKAASLPAyqslfadalayarqqggsketqlinasdrlaVNIGTEILN 86
Cdd:COG0176    1 MKLWLDTADREEIKelidLGGVDGVTTNPSLIAKAGIKDF-------------------------------VEDIREICD 49
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313  87 SIPGRVSTEVdarLSFDRGMCVAKARKLIAMYeekdihRSRILIKLAATWEGICAAEELEKEGINCNLTLLFSFAQARAC 166
Cdd:COG0176   50 IVDGPVSAEV---LATDTEGMIAEARRLAALY------RPNVVIKIPATEEGLKAIEELSAEGIKVNVTLIFSAAQALLA 120
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313 167 AEAGVYLISPFVGRIYDWyqarqpSADynaeqdpGVLSVRRIYEYYKQHRYRTIVMGASFRKVEQIL--ALAGCDRLTIA 244
Cdd:COG0176  121 AEAGASYVSPFVGRIDDI------GID-------GIALVREIYQIYKNYGARTRILAASFRNPLQVLeaALAGADTVTIP 187
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 742424313 245 PALLEQLKNStapverrlspstegyhqpaplsetefrwqhnqdpmavEKLSEGIRLFAADQQKL 308
Cdd:COG0176  188 PAVLEALADH-------------------------------------PLTDEGIEKFLADWEKL 214
 
Name Accession Description Interval E-value
PRK12346 PRK12346
transaldolase A; Provisional
1-316 0e+00

transaldolase A; Provisional


Pssm-ID: 183458  Cd Length: 316  Bit Score: 690.69  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313   1 MNQLDALKQFTVVVADSGDIESIRHFSPQDATTNPSLILKAASLPAYQSLFADALAYARQQGGSKETQLINASDRLAVNI 80
Cdd:PRK12346   1 MNQLDGIKQFTTVVADSGDIESIRHYHPQDATTNPSLLLKAAGLPQYQHLIDDAIAWGKKQGGTQEQQVVAACDKLAVNF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313  81 GTEILNSIPGRVSTEVDARLSFDRGMCVAKARKLIAMYEEKDIHRSRILIKLAATWEGICAAEELEKEGINCNLTLLFSF 160
Cdd:PRK12346  81 GAEILKSVPGRVSTEVDARLSFDREKSIEKARHLVDLYQQQGIDKSRILIKLASTWEGIRAAEELEKEGINCNLTLLFSF 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313 161 AQARACAEAGVYLISPFVGRIYDWYQARQPSADYNAEQDPGVLSVRRIYEYYKQHRYRTIVMGASFRKVEQILALAGCDR 240
Cdd:PRK12346 161 AQARACAEAGVFLISPFVGRIYDWYQARKPMDPYVVEEDPGVKSVRNIYDYYKQHRYETIVMGASFRRTEQILALAGCDR 240
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 742424313 241 LTIAPALLEQLKNSTAPVERRLSPSTEGYHQPAPLSETEFRWQHNQDPMAVEKLSEGIRLFAADQQKLEDLLAAQL 316
Cdd:PRK12346 241 LTISPNLLKELQESESPVERKLIPSSQTFPRPAPMSEAEFRWEHNQDAMAVEKLSEGIRLFAVDQRKLEDLLAAKL 316
PRK05269 PRK05269
transaldolase B; Provisional
1-316 0e+00

transaldolase B; Provisional


Pssm-ID: 235381 [Multi-domain]  Cd Length: 318  Bit Score: 626.03  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313   1 MNQLDALKQFTVVVADSGDIESIRHFSPQDATTNPSLILKAASLPAYQSLFADALAYARQQGGSKETQLINASDRLAVNI 80
Cdd:PRK05269   2 TNKLEQLKQFTTVVADTGDIEAIKKYQPQDATTNPSLILKAAQIPEYAPLIDDAVAWAKQQSGDRAQQIDDAIDKLAVNF 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313  81 GTEILNSIPGRVSTEVDARLSFDRGMCVAKARKLIAMYEEKDIHRSRILIKLAATWEGICAAEELEKEGINCNLTLLFSF 160
Cdd:PRK05269  82 GLEILKLIPGRVSTEVDARLSFDTEATIAKARKLIALYEEAGISKDRILIKIASTWEGIRAAEQLEKEGINCNLTLLFSF 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313 161 AQARACAEAGVYLISPFVGRIYDWYQARQPSADYNAEQDPGVLSVRRIYEYYKQHRYRTIVMGASFRKVEQILALAGCDR 240
Cdd:PRK05269 162 AQARACAEAGVFLISPFVGRILDWYKKNTGKKEYAPAEDPGVVSVTKIYNYYKKHGYKTVVMGASFRNTGQILELAGCDR 241
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 742424313 241 LTIAPALLEQLKNSTAPVERRLSPSTEGYHQPAPLSETEFRWQHNQDPMAVEKLSEGIRLFAADQQKLEDLLAAQL 316
Cdd:PRK05269 242 LTISPALLEELAASEGELERKLSPPGEAKARPVPLTEAEFRWQHNEDAMATEKLAEGIRKFAKDQEKLEKLIAAKL 317
Transaldolase_TalAB cd00957
Transaldolases including both TalA and TalB; Transaldolases including both TalA and TalB. The ...
2-312 0e+00

Transaldolases including both TalA and TalB; Transaldolases including both TalA and TalB. The enzyme catalyses the reversible transfer of a dyhydroxyacetone moiety, derived from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. The catalytic mechanism is similar to other class I aldolases. The enzyme is found in the non-oxidative branch of the pentose phosphate pathway and forms a dimer in solution.


Pssm-ID: 188644 [Multi-domain]  Cd Length: 313  Bit Score: 541.05  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313   2 NQLDALKQFTVVVADSGDIESIRHFSPQDATTNPSLILKAASLPAYQSLFADALAYARQQGGSKETQLINASDRLAVNIG 81
Cdd:cd00957    1 NQLDQLKKFTTIVADTGDFEAIKKFKPQDATTNPSLILAAAKLPEYNKLVDEAIAYAKKKGGSDEDQISNALDKLLVNFG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313  82 TEILNSIPGRVSTEVDARLSFDRGMCVAKARKLIAMYEEKDIHRSRILIKLAATWEGICAAEELEKEGINCNLTLLFSFA 161
Cdd:cd00957   81 TEILKLIPGRVSTEVDARLSFDTNATIAKARKLIKLYEEAGIDKERILIKIAATWEGIQAAKQLEKEGIHCNLTLLFSFA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313 162 QARACAEAGVYLISPFVGRIYDWYQARQPSADYNAEQDPGVLSVRRIYEYYKQHRYRTIVMGASFRKVEQILALAGCDRL 241
Cdd:cd00957  161 QAVACAEAGVTLISPFVGRILDWYKKHSGDKAYTAEEDPGVASVKKIYNYYKKFGYKTKVMGASFRNIGQILALAGCDYL 240
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 742424313 242 TIAPALLEQLKNSTAPVERRLSP--STEGYHQPAPLSETEFRWQHNQDPMAVEKLSEGIRLFAADQQKLEDLL 312
Cdd:cd00957  241 TISPALLEELKNSTAKVERKLDPaaSKALDIHPNFLDESAFRWALNEDAMAVEKLSEGIRGFAKDAVKLEKLI 313
talAB TIGR00874
transaldolase; This family includes the majority of known and predicted transaldolase ...
2-316 0e+00

transaldolase; This family includes the majority of known and predicted transaldolase sequences, including E. coli TalA and TalB. It excluded two other families. The first includes E. coli transaldolase-like protein TalC. The second family includes the putative transaldolases of Helicobacter pylori and Mycobacterium tuberculosis. [Energy metabolism, Pentose phosphate pathway]


Pssm-ID: 162081  Cd Length: 317  Bit Score: 536.27  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313    2 NQLDALKQFTVVVADSGDIESIRHFSPQDATTNPSLILKAASLPAYQSLFADALAYARQQGGSKETQLINASDRLAVNIG 81
Cdd:TIGR00874   1 NQLDQLKQFTVVVADTGDIEAIKKYQPQDATTNPSLILAAAQLPKYAELIDEAVAWGKKQGKDDAQQVENALDKLAVNFG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313   82 TEILNSIPGRVSTEVDARLSFDRGMCVAKARKLIAMYEEKDIHRSRILIKLAATWEGICAAEELEKEGINCNLTLLFSFA 161
Cdd:TIGR00874  81 LEILKIVPGRVSTEVDARLSFDTEATVEKARHLIKLYEDAGVDKKRILIKIASTWEGIRAAEELEKEGIHCNLTLLFSFV 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313  162 QARACAEAGVYLISPFVGRIYDWYQARQPSADYNAEQDPGVLSVRRIYEYYKQHRYRTIVMGASFRKVEQILALAGCDRL 241
Cdd:TIGR00874 161 QAIACAEAKVTLISPFVGRILDWYKAATGKKEYSIEEDPGVASVKKIYNYYKKHGYPTEVMGASFRNKEEILALAGCDRL 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 742424313  242 TIAPALLEQLKNSTAPVERRLSPSTE--GYHQPAPLSETEFRWQHNQDPMAVEKLSEGIRLFAADQQKLEDLLAAQL 316
Cdd:TIGR00874 241 TISPALLDELKESTGPVERKLDPESAkkVDKQPIILDESEFRFLHNEDAMATEKLAEGIRKFAADQEKLEKLLEEKL 317
PTZ00411 PTZ00411
transaldolase-like protein; Provisional
1-316 3.95e-171

transaldolase-like protein; Provisional


Pssm-ID: 240406  Cd Length: 333  Bit Score: 477.69  E-value: 3.95e-171
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313   1 MNQLDALKQFTVVVADSGDIESIRHFSPQDATTNPSLILKAASLPAYQSLFADALAYARQQGGS---------KETQLIN 71
Cdd:PTZ00411   2 PNQLEALKEHTTVVADTGDFSLLKKFQPEDATTNPSLVLAAAQMPEYAHLIDDAIKYAKANVSRlrdpllsdeEKEELVE 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313  72 -ASDRLAVNIGTEILNSIPGRVSTEVDARLSFDRGMCVAKARKLIAMYEEKDIHRSRILIKLAATWEGICAAEELEKEGI 150
Cdd:PTZ00411  82 lVVDKLTVNFGVEILKIVPGRVSTEVDARLSFDKQAMVDKARKIIKMYEEAGISKDRILIKLASTWEGIQAAKALEKEGI 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313 151 NCNLTLLFSFAQARACAEAGVYLISPFVGRIYDWYQARQPSADYNAEQDPGVLSVRRIYEYYKQHRYRTIVMGASFRKVE 230
Cdd:PTZ00411 162 HCNLTLLFSFAQAVACAQAGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYNYYKKHGYKTIVMGASFRNTG 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313 231 QILALAGCDRLTIAPALLEQLKNSTA-PVERRLSP--STEGYHQPAPLSETEFRWQHNQDPMAVEKLSEGIRLFAADQQK 307
Cdd:PTZ00411 242 EILELAGCDKLTISPKLLEELANTEDgPVERKLDPekLTEDTEKLPELTEKEFRWELNEDAMATEKLAEGIRNFAKDLEK 321

                 ....*....
gi 742424313 308 LEDLLAAQL 316
Cdd:PTZ00411 322 LENVIRAKL 330
PRK12309 PRK12309
transaldolase;
1-316 4.72e-150

transaldolase;


Pssm-ID: 183426 [Multi-domain]  Cd Length: 391  Bit Score: 426.46  E-value: 4.72e-150
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313   1 MNQLDALKQFTVVVADSGDIESIRHFSPQDATTNPSLILKAASLPAYQSLFADALAYARQQGGSKET--QLIN-ASDRLA 77
Cdd:PRK12309   3 ASLLEQLRQMTVVVADTGDIQAIEKFTPRDATTNPSLITAAAQMPQYQSIVDETLRQARKELGSDAPveDVVAlAFDRLA 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313  78 VNIGTEILNSIPGRVSTEVDARLSFDRGMCVAKARKLIAMYEEKDIHRSRILIKLAATWEGICAAEELEKEGINCNLTLL 157
Cdd:PRK12309  83 VAFGLKILKIVPGRVSTEVDARLSYDTEATIAKARKLISLYEDAGISRDRVLIKIASTWEGIKAAEVLEKEGIHCNLTLL 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313 158 FSFAQARACAEAGVYLISPFVGRIYDWYQARQPSADYNAEQDPGVLSVRRIYEYYKQHRYRTIVMGASFRKVEQILALAG 237
Cdd:PRK12309 163 FGFHQAIACAEAGVTLISPFVGRILDWYKKETGRDSYPGAEDPGVQSVTQIYNYYKKFGYKTEVMGASFRNIGEIIELAG 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313 238 CDRLTIAPALLEQLKNSTAPVERRLSPST--EGYHQPAPLSETEFRWQHNQDPMAVEKLSEGIRLFAADQQKLEDLLAAQ 315
Cdd:PRK12309 243 CDLLTISPKLLEQLRSTEAELPRKLDPANaaGMEIEKIHMDRATFDKMHAEDRMASEKLDEGIKGFSKALETLEKLLAHR 322

                 .
gi 742424313 316 L 316
Cdd:PRK12309 323 L 323
TAL_FSA pfam00923
Transaldolase/Fructose-6-phosphate aldolase; Transaldolase (TAL) is an enzyme of the pentose ...
13-312 2.05e-99

Transaldolase/Fructose-6-phosphate aldolase; Transaldolase (TAL) is an enzyme of the pentose phosphate pathway (PPP) found almost ubiquitously in the three domains of life (Archaea, Bacteria, and Eukarya). TAL shares a high degree of structural similarity and sequence identity with fructose-6-phosphate aldolase (FSA). They both belong to the class I aldolase family. Their protein structures have been revealed.


Pssm-ID: 395737 [Multi-domain]  Cd Length: 226  Bit Score: 291.75  E-value: 2.05e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313   13 VVADSGDIESIRHFSP----QDATTNPSLILKAASlpaYQSLFADALAYARQQGgsketqlinasdrlavnigteilnsi 88
Cdd:pfam00923   1 IWLDTADRDLIKKLIEeggiDGVTTNPSIFLKAIE---YSALYDEAIAEIKEIG-------------------------- 51
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313   89 PGRVSTEVDARLSFDRGMCVAKARKLIAMYEekdihRSRILIKLAATWEGICAAEELEKEGINCNLTLLFSFAQARACAE 168
Cdd:pfam00923  52 DGPVSLEVDPRLADDTEGTIEEARRLIALYG-----RPNVLIKIPATWEGIKAIKELSAEGINVNVTLIFSLAQALAAAE 126
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313  169 AGVYLISPFVGRIYDWYQARQPSAdynAEQDPGVLSVRRIYEYYKQHRYRTIVMGASFRKVEQILALAGCDRLTIAPALL 248
Cdd:pfam00923 127 AGASVISPFVGRIDDWGDKRLGAA---LRGDDGIANAKEIYQIYKKYGWSTGVLAASFRNVLYVLALAGCDTITIPPDTL 203
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 742424313  249 EQLKNstapverrlspstegyhqpaplsetefrwqhnqdpmaveklSEGIRLFAADQQKLEDLL 312
Cdd:pfam00923 204 EALAK-----------------------------------------DEGVRKFAKDWEKLLGSI 226
TalA COG0176
Transaldolase/fructose-6-phosphate aldolase [Carbohydrate transport and metabolism]; ...
11-308 1.01e-76

Transaldolase/fructose-6-phosphate aldolase [Carbohydrate transport and metabolism]; Transaldolase/fructose-6-phosphate aldolase is part of the Pathway/BioSystem: Pentose phosphate pathway


Pssm-ID: 439946 [Multi-domain]  Cd Length: 214  Bit Score: 233.43  E-value: 1.01e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313  11 TVVVADSGDIESIR----HFSPQDATTNPSLILKAASLPAyqslfadalayarqqggsketqlinasdrlaVNIGTEILN 86
Cdd:COG0176    1 MKLWLDTADREEIKelidLGGVDGVTTNPSLIAKAGIKDF-------------------------------VEDIREICD 49
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313  87 SIPGRVSTEVdarLSFDRGMCVAKARKLIAMYeekdihRSRILIKLAATWEGICAAEELEKEGINCNLTLLFSFAQARAC 166
Cdd:COG0176   50 IVDGPVSAEV---LATDTEGMIAEARRLAALY------RPNVVIKIPATEEGLKAIEELSAEGIKVNVTLIFSAAQALLA 120
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313 167 AEAGVYLISPFVGRIYDWyqarqpSADynaeqdpGVLSVRRIYEYYKQHRYRTIVMGASFRKVEQIL--ALAGCDRLTIA 244
Cdd:COG0176  121 AEAGASYVSPFVGRIDDI------GID-------GIALVREIYQIYKNYGARTRILAASFRNPLQVLeaALAGADTVTIP 187
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 742424313 245 PALLEQLKNStapverrlspstegyhqpaplsetefrwqhnqdpmavEKLSEGIRLFAADQQKL 308
Cdd:COG0176  188 PAVLEALADH-------------------------------------PLTDEGIEKFLADWEKL 214
Transaldolase cd00439
Transaldolase; Transaldolase. Enzymes found in the non-oxidative branch of the pentose ...
13-251 4.09e-76

Transaldolase; Transaldolase. Enzymes found in the non-oxidative branch of the pentose phosphate pathway, that catalyze the reversible transfer of a dihydroxyacetone group from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. They are members of the class I aldolases, who are characterized by using a Schiff-base mechanism for stabilization of the reaction intermediates.


Pssm-ID: 188631 [Multi-domain]  Cd Length: 252  Bit Score: 233.40  E-value: 4.09e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313  13 VVADSGDIESI----RHFSPQDATTNPSLILKAASLPAYQSLFADALAYARQQGGSKETQLINASDRLAVNIGTEILNSI 88
Cdd:cd00439    2 PWYDTLDRPATdllpLIRGVRGVTTNPSIIQAAISTSNAYNDQFRTLVESGKDIESAYWELVVKDIQDACKLFEPIYDQT 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313  89 --PGRVSTEVDARLSFDRGMCVAKARKLIAMYEEKDIhrsriLIKLAATWEGICAAEELEKEGINCNLTLLFSFAQARAC 166
Cdd:cd00439   82 eaDGRVSVEVSARLADDTQGMVEAAKYLSKVVNRRNI-----YIKIPATAEGIPAIKDLIAAGISVNVTLIFSIAQYEAV 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313 167 AEAGVYLISPFVGRIYDWYQARQPSADYNAEQDPGVLSVRRIYEYYKQHRYRTIVMGASFRKVEQILALAGCDRLTIAPA 246
Cdd:cd00439  157 ADAGTSVASPFVSRIDTLMDKMLEQIGLDLRGKAGVAQVTLAYKLYKQKFKKQRVLWASFSDTLYVAPLIGCDTVTTMPD 236

                 ....*
gi 742424313 247 LLEQL 251
Cdd:cd00439  237 QALEA 241
Transaldolase_FSA cd00956
Transaldolase-like fructose-6-phosphate aldolases (FSA) found in bacteria and archaea; ...
16-251 6.51e-32

Transaldolase-like fructose-6-phosphate aldolases (FSA) found in bacteria and archaea; Transaldolase-like fructose-6-phosphate aldolases (FSA) found in bacteria and archaea, which are member of the MipB/TalC subfamily of class I aldolases. FSA catalyze an aldol cleavage of fructose 6-phosphate and do not utilize fructose, fructose 1-phosphate, fructose 1,6-phosphate, or dihydroxyacetone phosphate. The enzymes belong to the transaldolase family that serves in transfer reactions in the pentose phosphate cycle, and are more distantly related to fructose 1,6-bisphosphate aldolase.


Pssm-ID: 188643 [Multi-domain]  Cd Length: 211  Bit Score: 118.06  E-value: 6.51e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313  16 DSGDIESIRHFSPQ----DATTNPSLILKAASLPAYQSLfadalayarqqggsketqlinasdrlavnigTEILNSIPGR 91
Cdd:cd00956    5 DTADLEEIKKASETglldGVTTNPSLIAKSGRIDFEAVL-------------------------------KEICEIIDGP 53
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313  92 VSTEVDARlSFDrGMcVAKARKLIAmyeekdIHrSRILIKLAATWEGICAAEELEKEGINCNLTLLFSFAQARACAEAGV 171
Cdd:cd00956   54 VSAQVVST-DAE-GM-VAEARKLAS------LG-GNVVVKIPVTEDGLKAIKKLSEEGIKTNVTAIFSAAQALLAAKAGA 123
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313 172 YLISPFVGRIydwyqarqpsADYNAEqdpGVLSVRRIYEYYKQHRYRTIVMGASFRKVEQIL--ALAGCDRLTIAPALLE 249
Cdd:cd00956  124 TYVSPFVGRI----------DDLGGD---GMELIREIRTIFDNYGFDTKILAASIRNPQHVIeaALAGADAITLPPDVLE 190

                 ..
gi 742424313 250 QL 251
Cdd:cd00956  191 QL 192
fsa_talC_mipB TIGR00875
fructose-6-phosphate aldolase, TalC/MipB family; This model represents a family that includes ...
69-256 1.80e-19

fructose-6-phosphate aldolase, TalC/MipB family; This model represents a family that includes the E. coli transaldolase homologs TalC and MipB, both shown to be fructose-6-phosphate aldolases rather than transaldolases as previously thought. It is related to but distinct from the transaldolase family of E. coli TalA and TalB. The member from Bacillus subtilis becomes phosphorylated during early stationary phase but not during exponential growth. [Energy metabolism, Pentose phosphate pathway]


Pssm-ID: 129953 [Multi-domain]  Cd Length: 213  Bit Score: 84.91  E-value: 1.80e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313   69 LINASDRLAVNIGTEILNSIPGRVSTEVdarLSFDRGMCVAKARKLIAMYEEkdihrsrILIKLAATWEGICAAEELEKE 148
Cdd:TIGR00875  31 LIAKEGRSFWEVLKEIQEAVEGPVSAET---ISLDAEGMVEEAKELAKLAPN-------IVVKIPMTSEGLKAVKILKKE 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313  149 GINCNLTLLFSFAQARACAEAGVYLISPFVGRIydwyqarqpsadyNAEQDPGVLSVRRIYEYYKQHRYRTIVMGASFRK 228
Cdd:TIGR00875 101 GIKTNVTLVFSAAQALLAAKAGATYVSPFVGRL-------------DDIGGDGMKLIEEVKTIFENHAPDTEVIAASVRH 167
                         170       180       190
                  ....*....|....*....|....*....|
gi 742424313  229 VEQIL--ALAGCDRLTIAPALLEQLKNSTA 256
Cdd:TIGR00875 168 PRHVLeaALIGADIATMPLDVMQQLFNHPL 197
Transaldolase_like cd00955
Transaldolase-like proteins from plants and bacteria; Transaldolase-like proteins from plants ...
31-215 1.60e-18

Transaldolase-like proteins from plants and bacteria; Transaldolase-like proteins from plants and bacteria. Transaldolase is found in the non-oxidative branch of the pentose phosphate pathway, that catalyze the reversible transfer of a dihydroxyacetone group from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. They are members of the class I aldolases, who are characterized by using a Schiff-base mechanism for stabilization of the reaction intermediates.


Pssm-ID: 188642 [Multi-domain]  Cd Length: 338  Bit Score: 84.68  E-value: 1.60e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313  31 ATTNPSLILKA-ASLPAYQslfaDALAYARQQGGSKE-------TQLI-NASDRLAVNIgtEILNSIPGRVSTEVDARLS 101
Cdd:cd00955   29 VTSNPAIFEKAiAGSAAYD----DQIRALKGQGLDAEaiyealaIEDIqDACDLLAPVY--EQTGGNDGYVSLEVSPRLA 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313 102 FDRGMCVAKARKLiamyeEKDIHRSRILIKLAATWEGICAAEELEKEGINCNLTLLFSFAQARACAEAgvYL-------- 173
Cdd:cd00955  103 DDTQGTIAEAKRL-----WKAVGRPNLMIKIPATEAGLPAIEELIAAGISVNVTLIFSLEQYEAVAEA--YLrglerrve 175
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 742424313 174 -----------ISPFVGRIYDWYQARQPSADYNAEQDP-GVLSVRRIYEYYKQH 215
Cdd:cd00955  176 gggdlsqvasvASFFVSRVDTLIDKKLDAPEAKALQGKvAIANAKLAYQEYQEK 229
PRK03343 PRK03343
transaldolase; Validated
1-173 3.54e-15

transaldolase; Validated


Pssm-ID: 235117  Cd Length: 368  Bit Score: 75.24  E-value: 3.54e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313   1 MNQLDALKQFTVVV---------ADSGDIES-IRHFSPQDATTNPSLILKA-ASLPAYQSLFADALAyarqQGGSKET-- 67
Cdd:PRK03343   2 MNPLQALSALGQSIwlddlsrdrLTSGNLARlIDEKGVVGVTSNPAIFQKAiAGGDAYDAQIAELAA----AGADVEEay 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313  68 -QLINASDRLAVNIGTEIL---NSIPGRVSTEVDARLSFDRGMCVAKARKLIAMyeekdIHRSRILIKLAATWEGICAAE 143
Cdd:PRK03343  78 eELTTADVRNACDVLRPVYeatGGVDGRVSIEVSPRLAHDTEATIAEARRLWAA-----VDRPNLMIKIPATPEGLPAIE 152
                        170       180       190
                 ....*....|....*....|....*....|
gi 742424313 144 ELEKEGINCNLTLLFSFAQARACAEAgvYL 173
Cdd:PRK03343 153 ALIAEGISVNVTLIFSVERYRAVADA--YL 180
PRK03903 PRK03903
transaldolase; Provisional
90-181 1.45e-12

transaldolase; Provisional


Pssm-ID: 235171  Cd Length: 274  Bit Score: 66.54  E-value: 1.45e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313  90 GRVSTEVDARLSFDRGMCVAKARKLIamyeeKDIHRSRILIKLAATWEGICAAEELEKEGINCNLTLLFSFAQARACAEA 169
Cdd:PRK03903  43 GFISIEIDPFLEDDAAGSIEEGKRLY-----KTIGRPNVMIKVPATKAGYEAMSALMKKGISVNATLIFSPEQAKECAEA 117
                         90       100
                 ....*....|....*....|....*
gi 742424313 170 -------------GVylISPFVGRI 181
Cdd:PRK03903 118 lneglkkntkdpkAV--ISVFVSRF 140
PRK09533 PRK09533
bifunctional transaldolase/phosoglucose isomerase; Validated
32-169 7.72e-10

bifunctional transaldolase/phosoglucose isomerase; Validated


Pssm-ID: 236551 [Multi-domain]  Cd Length: 948  Bit Score: 59.98  E-value: 7.72e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313  32 TTNPSLILKA-ASLPAYQSLFADALAYARQQGGSKETQLI-----NASDRLA-VnigTEILNSIPGRVSTEVDARLSFDR 104
Cdd:PRK09533  42 TSNPAIFEKAiGSSDEYDDAIKAALAEGDRSVIELYETLAiediqAAADVLRpV---YDATDGADGFVSLEVSPYLALDT 118
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 742424313 105 GMCVAKARKLIamyeeKDIHRSRILIKLAATWEGICAAEELEKEGINCNLTLLFSFAQARACAEA 169
Cdd:PRK09533 119 EGTIAEARRLW-----AAVDRPNLMIKVPATPEGLPAIRQLIAEGINVNVTLLFSQDVYEEVAEA 178
PRK12653 PRK12653
fructose-6-phosphate aldolase; Reviewed
16-256 4.74e-09

fructose-6-phosphate aldolase; Reviewed


Pssm-ID: 183653 [Multi-domain]  Cd Length: 220  Bit Score: 55.56  E-value: 4.74e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313  16 DSGDIESIRHFSP----QDATTNPSlILKAASLPAYQSLFA--DALayarqqGGSketqlinasdrlavnigteilnsip 89
Cdd:PRK12653   6 DTSDVVAVKALSRifplAGVTTNPS-IIAAGKKPLEVVLPQlhEAM------GGQ------------------------- 53
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313  90 GRVSTEVDArlSFDRGMcVAKARKLIAMYEEkdihrsrILIKLAATWEGICAAEELEKEGINCNLTLLFSFAQARACAEA 169
Cdd:PRK12653  54 GRLFAQVMA--TTAEGM-VNDARKLRSIIAD-------IVVKVPVTAEGLAAIKMLKAEGIPTLGTAVYGAAQGLLSALA 123
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742424313 170 GVYLISPFVGRIydwyqarqpsadyNAEQDPGVLSVRRIYEYYKQHRYRTIVMGASFRKVEQILA--LAGCDRLTIAPAL 247
Cdd:PRK12653 124 GAEYVAPYVNRI-------------DAQGGSGIQTVTDLQQLLKMHAPQAKVLAASFKTPRQALDclLAGCESITLPLDV 190

                 ....*....
gi 742424313 248 LEQLKNSTA 256
Cdd:PRK12653 191 AQQMISYPA 199
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH