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Conserved domains on  [gi|743523789|ref|WP_039041030|]
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MULTISPECIES: tripartite tricarboxylate transporter TctB family protein [Aeromonas]

Protein Classification

tripartite tricarboxylate transporter TctB family protein( domain architecture ID 10538174)

tripartite tricarboxylate transporter TctB family protein similar to a Comamonas sp. small transmembrane protein that has been implicated in terephthalate uptake

Gene Ontology:  GO:0005215

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
TctB pfam07331
Tripartite tricarboxylate transporter TctB family; This family consists of several ...
 35-142 1.78e-08

Tripartite tricarboxylate transporter TctB family; This family consists of several hypothetical bacterial proteins of around 150 residues in length. This family was formerly known as DUF1468.


:

Pssm-ID: 462147  Cd Length: 131  Bit Score: 49.99  E-value: 1.78e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 743523789   35 YEPFTASTLPYALAGVGVLLSLILICSPGGERLGKES------GNWRLVFALLGLMLVYGLALGWLGFLVATILFLIGGI 108
Cdd:pfam07331  20 WGPVGPGFFPLLLGVLLALLGLLLLLKAAEGEDGDEParadwrPVLGLVLALLLLLLAYALLLEPLGFILATALFLLLGS 99

                          90       100       110
                  ....*....|....*....|....*....|....
gi 743523789  109 RlmGEQSLAFACKVSIPFTLMFWALLTKGLNVYL 142
Cdd:pfam07331 100 R--GERRWLLALLVSVVLTALVYLLFVKLLGVPL 131
 
Name Accession Description Interval E-value
TctB pfam07331
Tripartite tricarboxylate transporter TctB family; This family consists of several ...
 35-142 1.78e-08

Tripartite tricarboxylate transporter TctB family; This family consists of several hypothetical bacterial proteins of around 150 residues in length. This family was formerly known as DUF1468.


Pssm-ID: 462147  Cd Length: 131  Bit Score: 49.99  E-value: 1.78e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 743523789   35 YEPFTASTLPYALAGVGVLLSLILICSPGGERLGKES------GNWRLVFALLGLMLVYGLALGWLGFLVATILFLIGGI 108
Cdd:pfam07331  20 WGPVGPGFFPLLLGVLLALLGLLLLLKAAEGEDGDEParadwrPVLGLVLALLLLLLAYALLLEPLGFILATALFLLLGS 99

                          90       100       110
                  ....*....|....*....|....*....|....
gi 743523789  109 RlmGEQSLAFACKVSIPFTLMFWALLTKGLNVYL 142
Cdd:pfam07331 100 R--GERRWLLALLVSVVLTALVYLLFVKLLGVPL 131
 
Name Accession Description Interval E-value
TctB pfam07331
Tripartite tricarboxylate transporter TctB family; This family consists of several ...
 35-142 1.78e-08

Tripartite tricarboxylate transporter TctB family; This family consists of several hypothetical bacterial proteins of around 150 residues in length. This family was formerly known as DUF1468.


Pssm-ID: 462147  Cd Length: 131  Bit Score: 49.99  E-value: 1.78e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 743523789   35 YEPFTASTLPYALAGVGVLLSLILICSPGGERLGKES------GNWRLVFALLGLMLVYGLALGWLGFLVATILFLIGGI 108
Cdd:pfam07331  20 WGPVGPGFFPLLLGVLLALLGLLLLLKAAEGEDGDEParadwrPVLGLVLALLLLLLAYALLLEPLGFILATALFLLLGS 99

                          90       100       110
                  ....*....|....*....|....*....|....
gi 743523789  109 RlmGEQSLAFACKVSIPFTLMFWALLTKGLNVYL 142
Cdd:pfam07331 100 R--GERRWLLALLVSVVLTALVYLLFVKLLGVPL 131
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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