NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|746225897|ref|WP_039274929|]
View 

MULTISPECIES: sulfate/thiosulfate ABC transporter permease CysW [Pectobacterium]

Protein Classification

sulfate/thiosulfate ABC transporter permease CysW( domain architecture ID 10793595)

sulfate/thiosulfate ABC transporter permease CysW is part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
cysW PRK11602
sulfate/thiosulfate ABC transporter permease CysW;
1-287 1.83e-174

sulfate/thiosulfate ABC transporter permease CysW;


:

Pssm-ID: 183225  Cd Length: 283  Bit Score: 483.10  E-value: 1.83e-174
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897   1 MAEIPTVTsRRQPHPVrqerNWARTALIALGVILSLIMLVIPLVSIFAAALSHGLGGVWRNLSDPDMLHAIGLTLLVVAI 80
Cdd:PRK11602   1 MAEVTQLK-RYDRPPI----NWGKWFLIGIGMLVSAFILVVPMIYIFVQAFSKGLMPVLQNLADPDMLHAIWLTVLIALI 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  81 VVPVNLVFGTLLAWLVTRFQFPGRQLLLTLIDIPFAVSPVVAGLLYLLFYSTNGPVGGWLDEQGIQLMFAWPGIVLVTIF 160
Cdd:PRK11602  76 AVPVNLVFGILLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHNLQLMFSWPGMVLVTIF 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 161 VTCPFMVRELVPVMMSQGSQEEEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETYTL 240
Cdd:PRK11602 156 VTCPFVVRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSL 235

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 746225897 241 PLQVELLHQDYNSVGAFTAAALLTVMAILTLFIKSALQWRVKRQMNK 287
Cdd:PRK11602 236 PLQIELLEQDYNTVGSFTAAALLTLMAIITLFLKSMLQWRLENQEKR 282
 
Name Accession Description Interval E-value
cysW PRK11602
sulfate/thiosulfate ABC transporter permease CysW;
1-287 1.83e-174

sulfate/thiosulfate ABC transporter permease CysW;


Pssm-ID: 183225  Cd Length: 283  Bit Score: 483.10  E-value: 1.83e-174
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897   1 MAEIPTVTsRRQPHPVrqerNWARTALIALGVILSLIMLVIPLVSIFAAALSHGLGGVWRNLSDPDMLHAIGLTLLVVAI 80
Cdd:PRK11602   1 MAEVTQLK-RYDRPPI----NWGKWFLIGIGMLVSAFILVVPMIYIFVQAFSKGLMPVLQNLADPDMLHAIWLTVLIALI 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  81 VVPVNLVFGTLLAWLVTRFQFPGRQLLLTLIDIPFAVSPVVAGLLYLLFYSTNGPVGGWLDEQGIQLMFAWPGIVLVTIF 160
Cdd:PRK11602  76 AVPVNLVFGILLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHNLQLMFSWPGMVLVTIF 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 161 VTCPFMVRELVPVMMSQGSQEEEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETYTL 240
Cdd:PRK11602 156 VTCPFVVRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSL 235

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 746225897 241 PLQVELLHQDYNSVGAFTAAALLTVMAILTLFIKSALQWRVKRQMNK 287
Cdd:PRK11602 236 PLQIELLEQDYNTVGSFTAAALLTLMAIITLFLKSMLQWRLENQEKR 282
CysW COG4208
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 8-284 1.71e-170

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 443356  Cd Length: 281  Bit Score: 472.68  E-value: 1.71e-170
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897   8 TSRRQPHPVRQERNWARTALIALGVILSLIMLVIPLVSIFAAALSHGLGGVWRNLSDPDMLHAIGLTLLVVAIVVPVNLV 87
Cdd:COG4208    2 SSAARARSATTEPPWVRWLLIGLALLFLALFLVLPLAAVFAEAFSKGWGAYLAALTDPDALSAIRLTLLVAAIAVPLNLV 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  88 FGTLLAWLVTRFQFPGRQLLLTLIDIPFAVSPVVAGLLYLLFYSTNGPVGGWLDEQGIQLMFAWPGIVLVTIFVTCPFMV 167
Cdd:COG4208   82 FGVAAAWAITRFEFRGKRLLITLIDLPFSVSPVVAGLIYVLLFGAQGWFGPWLEAHDIKIIFAVPGIVLATIFVTFPFVA 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 168 RELVPVMMSQGSQEEEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETYTLPLQVELL 247
Cdd:COG4208  162 RELIPLMQEQGTDEEEAALTLGASGWQTFWRVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGETNTLPLHVEIL 241

                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 746225897 248 HQDYNSVGAFTAAALLTVMAILTLFIKSALQWRVKRQ 284
Cdd:COG4208  242 YNEYNFVAAFAVASLLALLALVTLVLKTLLEWRTARR 278
permease_CysW TIGR02140
sulfate ABC transporter, permease protein CysW; This model represents CysW, one of two ...
 23-283 2.41e-118

sulfate ABC transporter, permease protein CysW; This model represents CysW, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysT (TIGR02139). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]


Pssm-ID: 162725  Cd Length: 261  Bit Score: 340.13  E-value: 2.41e-118
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897   23 ARTALIALGVILSLIMLVIPLVSIFAAALSHGLGGVWRNLSDPDMLHAIGLTLLVVAIVVPVNLVFGTLLAWLVTRFQFP 102
Cdd:TIGR02140   1 VRYLLISLALGLLFLLLLLPLALIFQEAFEKGFGVFFAAISDPDALSAIKLTLLVALIVVPLNTVFGVCAAWVLTRFQFP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  103 GRQLLLTLIDIPFAVSPVVAGLLYLLFYSTNGPVGGWLDEQGIQLMFAWPGIVLVTIFVTCPFMVRELVPVMMSQGSQEE 182
Cdd:TIGR02140  81 GKRLLLTIIDLPFSVSPVVAGLIFVLLYGSQGWLGPWLEDLDIKIIFSLPGIVLATMFVTCPFVARELIPVMEEQGTEQE 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  183 EAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETYTLPLQVELLHQDYNSVGAFTAAAL 262
Cdd:TIGR02140 161 EAALTLGASWWQTFWRVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGKTNTLPLHVELLYNEYQSYAAFAAASL 240

                         250       260
                  ....*....|....*....|.
gi 746225897  263 LTVMAILTLFIKSALQWRVKR 283
Cdd:TIGR02140 241 LALLALVTLVLKAILERRQGR 261
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 71-268 2.10e-21

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 88.87  E-value: 2.10e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  71 IGLTLLVVAIVVPVNLVFGTLLAWLVTRFQFPGRQLLLTLIDIPFAVSPVVAGLLYLLFYSTNGPVGGWLDeqgiqlmFA 150
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPG-------LG 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 151 WPGIVLVTIFVTcPFMVRELVPVMMSQGSQEEEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVS 230
Cdd:cd06261   74 LPALILALLLIA-PFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLG 152

                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 746225897 231 GSIRGETYTLPLQVELLHQDYNSVGAFTAAALLTVMAI 268
Cdd:cd06261  153 GGEAPGPGTGLLLIFAILFPGDLGVAAAVALILLLLSL 190
ABC_perm1 NF038017
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ...
 74-240 9.74e-13

ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.


Pssm-ID: 411610 [Multi-domain]  Cd Length: 184  Bit Score: 65.26  E-value: 9.74e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  74 TLLVVAIVVPVNLVFGTLLAWLVTRFQFPGRQLLLTLIDIPFAVSPVVAGLLYLLFYSTNGPVGGWldeqgiQLMFAWPG 153
Cdd:NF038017   1 SLRVSGTATLIAALIGIPLGALLALRRFPGRRLVISLLNTLMGLPPVVVGLIVYLLLSRSGPLGFL------GLLYTPTA 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 154 IVLVTIFVTCPFM-------VRELVPVMMSQgsqeeeaAVLLGASGWQVfYRVTLPNIRWALLYGVVLTNARAIGEFGAV 226
Cdd:NF038017  75 MIIAQAVLALPIVagltlaaVQGLDPELRLQ-------ILSLGATRWQA-LWTLLKEARFALLAAVLAGFGRAISEVGAV 146

                        170
                 ....*....|....
gi 746225897 227 SVVSGSIRGETYTL 240
Cdd:NF038017 147 MMVGGNIRGYTRVL 160
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 89-283 2.27e-04

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 41.13  E-value: 2.27e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897   89 GTLLAWLVTRFQ-FPGRQLLLTLIDIPFAVsPVVAGLLYLLFYSTNGPVGgwldeqgiqlmFAWPGIVLVTIFVTCPFMV 167
Cdd:pfam00528   1 GIPLGIIAALRRgRRLDRLLRPLIDLLQAL-PSFVLAILLVVIAILSILG-----------HGILPAIILALLGWAGYAR 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  168 RELVPVMMSQGSQEEEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVsGSIRGETYTLPLQVELL 247
Cdd:pfam00528  69 LIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFL-GSWPGLGLLLIEAILGY 147

                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 746225897  248 HQDYNSVGAFTAAALLTVMAILTLFIKSALQWRVKR 283
Cdd:pfam00528 148 DYPEIQGPVLAAALILLLLNLLVDILQRLLDPRVRK 183
 
Name Accession Description Interval E-value
cysW PRK11602
sulfate/thiosulfate ABC transporter permease CysW;
1-287 1.83e-174

sulfate/thiosulfate ABC transporter permease CysW;


Pssm-ID: 183225  Cd Length: 283  Bit Score: 483.10  E-value: 1.83e-174
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897   1 MAEIPTVTsRRQPHPVrqerNWARTALIALGVILSLIMLVIPLVSIFAAALSHGLGGVWRNLSDPDMLHAIGLTLLVVAI 80
Cdd:PRK11602   1 MAEVTQLK-RYDRPPI----NWGKWFLIGIGMLVSAFILVVPMIYIFVQAFSKGLMPVLQNLADPDMLHAIWLTVLIALI 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  81 VVPVNLVFGTLLAWLVTRFQFPGRQLLLTLIDIPFAVSPVVAGLLYLLFYSTNGPVGGWLDEQGIQLMFAWPGIVLVTIF 160
Cdd:PRK11602  76 AVPVNLVFGILLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHNLQLMFSWPGMVLVTIF 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 161 VTCPFMVRELVPVMMSQGSQEEEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETYTL 240
Cdd:PRK11602 156 VTCPFVVRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSL 235

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 746225897 241 PLQVELLHQDYNSVGAFTAAALLTVMAILTLFIKSALQWRVKRQMNK 287
Cdd:PRK11602 236 PLQIELLEQDYNTVGSFTAAALLTLMAIITLFLKSMLQWRLENQEKR 282
CysW COG4208
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 8-284 1.71e-170

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 443356  Cd Length: 281  Bit Score: 472.68  E-value: 1.71e-170
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897   8 TSRRQPHPVRQERNWARTALIALGVILSLIMLVIPLVSIFAAALSHGLGGVWRNLSDPDMLHAIGLTLLVVAIVVPVNLV 87
Cdd:COG4208    2 SSAARARSATTEPPWVRWLLIGLALLFLALFLVLPLAAVFAEAFSKGWGAYLAALTDPDALSAIRLTLLVAAIAVPLNLV 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  88 FGTLLAWLVTRFQFPGRQLLLTLIDIPFAVSPVVAGLLYLLFYSTNGPVGGWLDEQGIQLMFAWPGIVLVTIFVTCPFMV 167
Cdd:COG4208   82 FGVAAAWAITRFEFRGKRLLITLIDLPFSVSPVVAGLIYVLLFGAQGWFGPWLEAHDIKIIFAVPGIVLATIFVTFPFVA 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 168 RELVPVMMSQGSQEEEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETYTLPLQVELL 247
Cdd:COG4208  162 RELIPLMQEQGTDEEEAALTLGASGWQTFWRVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGETNTLPLHVEIL 241

                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 746225897 248 HQDYNSVGAFTAAALLTVMAILTLFIKSALQWRVKRQ 284
Cdd:COG4208  242 YNEYNFVAAFAVASLLALLALVTLVLKTLLEWRTARR 278
permease_CysW TIGR02140
sulfate ABC transporter, permease protein CysW; This model represents CysW, one of two ...
 23-283 2.41e-118

sulfate ABC transporter, permease protein CysW; This model represents CysW, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysT (TIGR02139). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]


Pssm-ID: 162725  Cd Length: 261  Bit Score: 340.13  E-value: 2.41e-118
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897   23 ARTALIALGVILSLIMLVIPLVSIFAAALSHGLGGVWRNLSDPDMLHAIGLTLLVVAIVVPVNLVFGTLLAWLVTRFQFP 102
Cdd:TIGR02140   1 VRYLLISLALGLLFLLLLLPLALIFQEAFEKGFGVFFAAISDPDALSAIKLTLLVALIVVPLNTVFGVCAAWVLTRFQFP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  103 GRQLLLTLIDIPFAVSPVVAGLLYLLFYSTNGPVGGWLDEQGIQLMFAWPGIVLVTIFVTCPFMVRELVPVMMSQGSQEE 182
Cdd:TIGR02140  81 GKRLLLTIIDLPFSVSPVVAGLIFVLLYGSQGWLGPWLEDLDIKIIFSLPGIVLATMFVTCPFVARELIPVMEEQGTEQE 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  183 EAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETYTLPLQVELLHQDYNSVGAFTAAAL 262
Cdd:TIGR02140 161 EAALTLGASWWQTFWRVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGKTNTLPLHVELLYNEYQSYAAFAAASL 240

                         250       260
                  ....*....|....*....|.
gi 746225897  263 LTVMAILTLFIKSALQWRVKR 283
Cdd:TIGR02140 241 LALLALVTLVLKAILERRQGR 261
3a0106s02 TIGR00969
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and ...
 27-280 8.01e-109

sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and CysW, paralogous and generally tandemly encoded permease proteins of the sulfate ABC transporter. [Transport and binding proteins, Anions]


Pssm-ID: 273370  Cd Length: 271  Bit Score: 316.22  E-value: 8.01e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897   27 LIALGVILSLIMLVIPLVSIFAAALSHGLGGVWRNLSDPDMLHAIGLTLLVVAIVVPVNLVFGTLLAWLVTRFQFPGRQL 106
Cdd:TIGR00969  18 SLGIALLYVFLILILPVAALFVQAFSKGLGQFWQNATDPIAVSAYNLTLLMALIAVPLNGVFGLLIAWVLTRYQFPGRKL 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  107 LLTLIDIPFAVSPVVAGLLYLLFYSTNGPVGGWLDEQGIQLMFAWPGIVLVTIFVTCPFMVRELVPVMMSQGSQEEEAAV 186
Cdd:TIGR00969  98 LDALIDLPFALSPVVAGLTLALLYGSNGWLGSWLASFGIQIIFTWPGMALAMIFVSLPFVVREVQPVLEELGTEAEEAAA 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  187 LLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETYTLPLQVELLHQDYNSVGAFTAAALLTVM 266
Cdd:TIGR00969 178 TLGASGWQTFWRVTLPSIRWALLYGVVLTFARALGEFGAVVVVSGNIPGKTLTLPLLIEERLEQYDYPGAYVIAAVLLLV 257

                         250
                  ....*....|....
gi 746225897  267 AILTLFIKSALQWR 280
Cdd:TIGR00969 258 SLVTLFLINALQAR 271
CysU COG0555
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 20-283 4.74e-72

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440321 [Multi-domain]  Cd Length: 268  Bit Score: 222.70  E-value: 4.74e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  20 RNWARTALIALGVILSLImLVIPLVSIFAAALSHGLGGVWRNLSDPDMLHAIGLTLLVVAIVVPVNLVFGTLLAWLVTRF 99
Cdd:COG0555    6 LPGFGLTLGLTLLYLSLI-VLLPLAALVLKAAGLGWAEFWAVLTSPRVLAALKLSLGTALIAALINLVFGLPLAWVLVRY 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 100 QFPGRQLLLTLIDIPFAVSPVVAGLLYLLFYSTNGPVGGWLDEQGIQLMFAWPGIVLVTIFVTCPFMVRELVPVMMSQGS 179
Cdd:COG0555   85 RFPGKRLVDALVDLPFALPTAVAGIALLLLFGPNGWLGQLLAPLGIKVAFTPLGIVLAQTFVSLPFVVRTVQPVLEELDP 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 180 QEEEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETYTLPLQVELLHQDYNSVGAFTA 259
Cdd:COG0555  165 ELEEAAATLGASRWQTFRRVILPLLLPALLTGFALAFARALGEFGAVIFIAGNLPMKTEILPLLIYLKLEEGDYAGATAI 244

                        250       260
                 ....*....|....*....|....
gi 746225897 260 AALLTVMAILTLFIKSALQWRVKR 283
Cdd:COG0555  245 ALVLLLISFLLLLLINLLQRRSRR 268
ModB COG4149
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and ...
 64-284 8.25e-54

ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and metabolism]; ABC-type molybdate transport system, permease component ModB is part of the Pathway/BioSystem: Molybdopterin biosynthesis


Pssm-ID: 443320 [Multi-domain]  Cd Length: 223  Bit Score: 174.47  E-value: 8.25e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  64 DPDMLHAIGLTLLVVAIVVPVNLVFGTLLAWLVTRFQFPGRQLLLTLIDIPFAVSPVVAGLLYLLFYSTNGPVGGWLDEQ 143
Cdd:COG4149    2 SPEDWSALWLSLKVALIATLLLLLLGIPLAWWLARTRFRGKGLLEALVTLPLVLPPTVLGFYLLLLFGRNGPLGQLLEEL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 144 -GIQLMFAWPGIVLVTIFVTCPFMVRELVPVMMSQGSQEEEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGE 222
Cdd:COG4149   82 fGISLVFTWTGAVLASVVVSLPLMVQPLRAAFEAVDPRLEEAARTLGASPWRVFFRVTLPLAKPGILAGAVLAFARALGE 161

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 746225897 223 FGAVSVVSGSIRGETYTLPLQVELLHQDYNSVGAFTAAALLTVMAILTLFIKSALQWRVKRQ 284
Cdd:COG4149  162 FGATLMFAGNIPGKTQTLPLAIYDAVEAGDYAAAHALSLILLAISFVVLLLLNLLNRRRRRR 223
cysT CHL00187
sulfate transport protein; Provisional
 35-242 6.15e-53

sulfate transport protein; Provisional


Pssm-ID: 214388 [Multi-domain]  Cd Length: 237  Bit Score: 172.51  E-value: 6.15e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  35 SLIMLVIPLVSIFAAALSHGLGGVWRNLSDPDMLHAIGLTLLVVAIVVPVNLVFGTLLAWLVTRFQFPGRQLLLTLIDIP 114
Cdd:CHL00187  21 IIFLLVLPILALLIKASQQPWSDFLQKATEPIALSAYSLTLSMALIAALINGFFGLLIAWVLVRYNFPGKRLLDAAVDLP 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 115 FAVSPVVAGLLYLLFYSTNGPVGGWLDEQGIQLMFAWPGIVLVTIFVTCPFMVRELVPVMMSQGSQEEEAAVLLGASGWQ 194
Cdd:CHL00187 101 FALPTSVAGLTLATVYGDNGWIGHLLSHLGIQIVFTKLGVLLAMIFVSFPFVVRTIQPVLQEIEKELEEAAWSLGASPWQ 180

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 746225897 195 VFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETYTLPL 242
Cdd:CHL00187 181 TFWKVIFPPLIPALLTGLALTFSRAIGEYGSIVIISSNIPFKDLVASV 228
permease_CysT TIGR02139
sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two ...
 28-283 3.37e-52

sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]


Pssm-ID: 131194  Cd Length: 265  Bit Score: 171.74  E-value: 3.37e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897   28 IALGVILS--LIMLVIPLVSIFAAALSHGLGGVWRNLSDPDMLHAIGLTLLVVAIVVPVNLVFGTLLAWLVTRFQFPGRQ 105
Cdd:TIGR02139   7 LSLGVTLTylSLIVLLPLAALFLKASQLGWAGFWQIITEPRVLAAYKLSFGTALIAALINAVFGTLLAWVLVRYRFPGKR 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  106 LLLTLIDIPFAVSPVVAGLLYLLFYSTNGPVGGWLDEQGIQLMFAWPGIVLVTIFVTCPFMVRELVPVMMSQGSQEEEAA 185
Cdd:TIGR02139  87 IVDALVDLPFALPTAVAGIALATLYSPNGWIGSFLAPLGIKIAFTPLGIVIALVFVSLPFVVRTVQPVLEEIEKELEEAA 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  186 VLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETYTLPLQVELLHQDYNSVGAFTAAALLTV 265
Cdd:TIGR02139 167 ASLGASRWQTFWRVILPALLPALLTGFALAFARAVGEYGSVIFIAGNLPMKTEIAPLLIFQKLEQYDYAGATAIASVMLI 246

                         250
                  ....*....|....*...
gi 746225897  266 MAILTLFIKSALQWRVKR 283
Cdd:TIGR02139 247 ISFVILLFINLLQWWALR 264
PRK10971 PRK10971
sulfate/thiosulfate ABC transporter permease CysT;
37-285 1.92e-49

sulfate/thiosulfate ABC transporter permease CysT;


Pssm-ID: 182873  Cd Length: 277  Bit Score: 164.93  E-value: 1.92e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  37 IMLVIPLVSIFAAALSHGLGGVWRNLSDPDMLHAIGLTLLVVAIVVPVNLVFGTLLAWLVTRFQFPGRQLLLTLIDIPFA 116
Cdd:PRK10971  26 LILLLPLSALVMQLSQMSWAQYWEVITNPQVVAAYKVTLLSAFVASIFNAVFGLLMAWILTRYRFPGRTLLDALMDLPFA 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 117 VSPVVAGLLYLLFYSTNGPVGGWLDEQGIQLMFAWPGIVLVTIFVTCPFMVRELVPVMMSQGSQEEEAAVLLGASGWQVF 196
Cdd:PRK10971 106 LPTAVAGLTLASLFSVNGWYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSF 185

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 197 YRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETYTLPLQVELLHQDYNSVGAFTAAALLTVMAILTLFIKSA 276
Cdd:PRK10971 186 RKVVLPELSPALLAGVALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFVRLQEFDYPAASAIASVILAASLLLLFSINT 265


                 ....*....
gi 746225897 277 LQWRVKRQM 285
Cdd:PRK10971 266 LQSRFGRRV 274
modB_ABC TIGR02141
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, ...
 73-283 1.15e-42

molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, of the molybdate ABC transporter. This system has been characterized in E. coli, Staphylococcus carnosus, Rhodobacter capsulatus and Azotobacter vinlandii. Molybdate is chemically similar to sulfate, thiosulfate, and selenate. These related substrates, and sometimes molybdate itself, can be transported by the homologous sulfate receptor. Some apparent molybdenum transport operons include a permease related to this ModB, although less similar than some sulfate permease proteins and not included in this model. [Transport and binding proteins, Anions]


Pssm-ID: 273993 [Multi-domain]  Cd Length: 208  Bit Score: 145.08  E-value: 1.15e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897   73 LTLLVVAIVVPVNLVFGTLLAWLVTRFQFPGRQLLLTLIDIPFAVSPVVAGLLYLLFYSTNGPVGGWLDEQGIQLMFAWP 152
Cdd:TIGR02141   2 LSLKVAVIATLLLLPLGIPVAWLLARSRFRGKPLLEVLVTLPLVLPPTVLGFYLLIAFGPNGPIGKLLELFGISLVFTFT 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  153 GIVLVTIFVTCPFMVRELVPVMMSQGSQEEEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGS 232
Cdd:TIGR02141  82 GAVLASVIVSFPLMVQPIRAAFEAVDPDLEEAARTLGASESQTFLKVTLPLAFPGLLAGAVLSFARALGEFGATLMFAGN 161

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 746225897  233 IRGETYTLPLQVellhqdYNSV-GAFTAAALLTVMAILTLFIK-SALQWRVKR 283
Cdd:TIGR02141 162 IPGETQTIPLAI------YDAVeSDYELAHQLSLVLLAISLIVlLLVELLNKR 208
Mo_ABC_porter TIGR01581
NifC-like ABC-type porter; This model describes a clade of ABC porter genes with relatively ...
 58-273 7.12e-42

NifC-like ABC-type porter; This model describes a clade of ABC porter genes with relatively weak homology compared to its neighbor clades, the molybdate (TIGR02141) and sulfate (TIGR00969) porters. Neighbor-Joining, PAM-distance phylogenetic trees support the separation of the clades in this way. Included in this group is a gene designated NifC in Clostridium pasturianum. It would be reasonable to presume that NifC acts as a molybdate porter since the most common form of nitrogenase is a molybdoenzyme. Several other sequences falling within the scope of this model are annotated as molybdate porters and one, from Halobacterium, is annotated as a sulfate porter. There is presently no experimental evidence to support annotations with this degree of specificity.


Pssm-ID: 130643  Cd Length: 225  Bit Score: 143.69  E-value: 7.12e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897   58 VWRNLSDPDMLHAIGLTLLVVAIVVPVNLVFGTLLAWLVTRFQFPGRQLLLTLIDIPFAVSPVVAGLLYLLFYSTNGPVG 137
Cdd:TIGR01581  10 ILSALTDPENIKALRLSLATSLASLLLAVIIGIPTAYVLARVRFPLKKLLDTLLDLPMVLPPLVAGLALLLLFGRNGLLG 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  138 GWLDEQGIQLMFAWPGIVLVTIFVTCPFMVRELVPVMMSQGSQEEEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNA 217
Cdd:TIGR01581  90 PYLEAAGIQVIFSTLGVVLAQTFVASPYYVRVARSTFKSVDPRYEDVARSLGAGPLETFRKITLPMARPGLLAGLVLAWA 169

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 746225897  218 RAIGEFGAVSVVSGSIRGETYTLPLQVELLHQDYNSVGAFTAAALLTVMAILTLFI 273
Cdd:TIGR01581 170 RALGEFGATLMFAGSIQGKTRTLPLAIYLNIQSDNIEAAVASALLLLVIAFLLLLV 225
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
23-273 7.61e-41

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 148.00  E-value: 7.61e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  23 ARTALIALGVILSLIMLVIPLVSIFAAALSHGLGGVWRNLSDPDMLHAIGLTLLVVAIVVPVNLVFGTLLAWLVTRFQFP 102
Cdd:COG1178    8 RPRLLLLLLALLLALLVLLPLLALLLRAFTDGLANFWALLSDPYLWRALGNTLLLALLVTLLSLLLGVPLAWLLARTDFP 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 103 GRQLLLTLIDIPFAVSPVVAGLLYLLFYSTNGPVGGWLDEQ-GIQL--MFAWPGIVLVTIFVTCPFMVRELVPVMMSQGS 179
Cdd:COG1178   88 GRRLLRWLLLLPLALPPYVVALAWIALFGPNGLLNTLLRALfGLEPpdIYGLGGIILVLVLFNYPYVYLLLRAALRSIDA 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 180 QEEEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVvsgsIRGETYTLPLQV-ELLHQDYNSVGAFT 258
Cdd:COG1178  168 SLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALLVFLLCLADFGTPLV----LGGGYTTLTTAIyQAWLGDFDLGAAAA 243

                        250
                 ....*....|....*
gi 746225897 259 AAALLTVMAILTLFI 273
Cdd:COG1178  244 LALVLLLLVLLLLLL 258
modB PRK09421
molybdate ABC transporter permease subunit;
65-285 4.85e-39

molybdate ABC transporter permease subunit;


Pssm-ID: 181841  Cd Length: 229  Bit Score: 136.59  E-value: 4.85e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  65 PDMLHAIGLTLLVVAIVVPVNLVFGTLLAWLVTRFQFPGRQLLLTLIDIPFAVSPVVAGLLYLLFYSTNGPVGGWLDEQ- 143
Cdd:PRK09421   5 DPEWQAVLLSLKVSSVAVLFSLPFGILVAWLLARCRFPGKSLLDSLLHLPLVLPPVVTGYLLLISMGRRGFIGQWLYEWf 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 144 GIQLMFAWPGIVLVTIFVTCPFMVRELVPVMMSQGSQEEEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEF 223
Cdd:PRK09421  85 GISFAFSWRGAALAAAVMAFPLMVRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLGEF 164

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 746225897 224 GAVSVVSGSIRGETYTLPLQVELLHQdynSVGAFTAAALLTVMAIL----TLFIKSALQWRVKRQM 285
Cdd:PRK09421 165 GATITFVSNIPGETQTIPSAMYTLIQ---TPGGESAAARLCIISIAialaSLLLSEWLARRSRKRL 227
PotC COG1177
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ...
 20-288 1.84e-31

ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];


Pssm-ID: 440790 [Multi-domain]  Cd Length: 262  Bit Score: 117.52  E-value: 1.84e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  20 RNWARTALIALGVILSLIMLVIPLVSIFAAAL--SHGLGGVWRNLS---------DPDMLHAIGLTLLVVAIVVPVNLVF 88
Cdd:COG1177    1 SSRLGRLLLRLFLALVLLFLYLPILVLVLYSFndSWFLTFPPEGFTlrwyaelfsDPRLLDALLNSLLIALLSTLLATVL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  89 GTLLAWLVTRFQFPGRQLLLTLIDIPFAVSPVVAGLLYLLFYSTNGPVGGWLdeqgiqlmfawpGIVLVTIFVTCPFMVR 168
Cdd:COG1177   81 GTPAALALARYRFRGRRLLLALLLLPLVVPGIVLGVALLLLFSALGLSGGLW------------GLILAHVVFTLPFVVL 148

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 169 ELVPVMMSQGSQEEEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGsirGETYTLPLQvelLH 248
Cdd:COG1177  149 VVLARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVITLFLAG---PGVTTLPVY---IY 222

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 746225897 249 QDYNSVGAFTAAALLTVMAILTLFIKSALQWRVKRQMNKR 288
Cdd:COG1177  223 SMIRRGISPEINALSTLLILLSLLLLLLAERLRRRGERRR 262
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
8-273 3.73e-29

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 116.03  E-value: 3.73e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897   8 TSRRQPHPVRQERNWARTALIALGVILSLIMLVIPLVSIFAAALSHGLGGVW------RNLSDPDMLHAIGLTLLVVAIV 81
Cdd:COG1178  271 VGGRARRPRRVKLGRWRWLALALCLLLVLLGLLLPLLALLLWSLTKALDDNLtldnyrFVLLDPSLLRALLNSLLLALLA 350

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  82 VPVNLVFGTLLAWLVTRFQFPGRQLLLTLIDIPFAVSPVVAGLLYLLFYSTNGPVGgwldeqgiqLMFAWPGIVLVTIFV 161
Cdd:COG1178  351 ALLAVLLALLLAYLVRRRRGRLARLLDRLAMLPYAVPGIVLGLGLLLLFNRPLPLL---------LYGTLAILVLAYVVR 421

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 162 TCPFMVRELVPVMMSQGSQEEEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSirgETYTLP 241
Cdd:COG1178  422 FLPFALRSLEAALAQIDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTSMKELSATLLLRPP---GFETLA 498

                        250       260       270
                 ....*....|....*....|....*....|..
gi 746225897 242 LQVELLHQDYNSVGAFTAAALLTVMAILTLFI 273
Cdd:COG1178  499 VLIYQLASSGRYGEAAALALLLVLVSLLPVLL 530
UgpA COG1175
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];
6-281 1.99e-28

ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 440788 [Multi-domain]  Cd Length: 298  Bit Score: 110.22  E-value: 1.99e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897   6 TVTSRRQPHPVRQERNWARTALIALGVILSLIMLVIPLVSIFAAALSH-----------GLGGVWRNLSDPDMLHAIGLT 74
Cdd:COG1175    2 TTTTSAAARRRRRRRRLAAYLFLLPALLLLLVFVLYPLLYTLYLSFTDwnllgpppefvGLDNYARLFTDPRFWNALGNT 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  75 LLVVAIVVPVNLVFGTLLAWLVTRfQFPGRQLLLTLIDIPFAVSPVVAGLLYLLFYSTN-GPVGGWLDEQGIQLM----- 148
Cdd:COG1175   82 LLFTVVSVPLQLVLGLLLALLLNR-KLRGRGFFRTLFFLPWVISPVVVALIWKWLFNPDyGLLNALLGALGLEPInwlgd 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 149 --FAWPGIVLVTIFVTCPFMVrelvpVMMSQGSQE-----EEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIG 221
Cdd:COG1175  161 psLALPAVIIVTVWKGTGFNM-----LIFLAGLQSiprelYEAARIDGASPWQRFRRITLPLLRPTILFVLVLSTIGALQ 235

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 746225897 222 EFGAVSVV-SGSIRGETYTLPLQVELLHQDYNSVGafTAAALLTVMAILTLFIkSALQWRV 281
Cdd:COG1175  236 VFDLVYVLtGGGPGNSTTTLVLYIYQTAFQQFDFG--YASAIAVVLFLIILVL-TLLQLRL 293
PotB COG1176
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ...
 20-284 9.51e-26

ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];


Pssm-ID: 440789 [Multi-domain]  Cd Length: 287  Bit Score: 102.92  E-value: 9.51e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  20 RNWARTALIALGVILSLIMLVIPLVSIFAAALSH--GLGGVWRN---------LSDPDMLHAIGLTLLVVAIVVPVNLVF 88
Cdd:COG1176    7 RRLRPLLLLLPALLWLLLFFVLPLLLLLVYSFTTrdPYGGVVPGftlenyarlFTDPLYLKVLLRTLWIALLTTLICLLL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  89 GTLLAWLVTRFQFPGRQLLLTLIDIPFAVSPVVAGLLYLLFYSTNGPVGGWLD-----EQGIQLMFAWPGIVLVTIFVTC 163
Cdd:COG1176   87 GYPIAYFLARAPPRWRNLLLLLVILPFWTSFLVRTYAWIVLLGRNGLLNSLLLalgliDEPLRLLYTEFAVVIGLVYVYL 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 164 PFMVRELVPVMMSQGSQEEEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGsirGETYTLPLQ 243
Cdd:COG1176  167 PFMVLPLYAALEKIDPSLLEAARDLGASPWQTFRRVILPLSLPGIIAGSLLVFIPALGAFVTPALLGG---GKVLMIGNL 243

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 746225897 244 VEllhQDYNSVGAF-TAAALLTVMAILTLFIKSALQWRVKRQ 284
Cdd:COG1176  244 IY---QQFLSALNWpLAAALAVVLLLIVLLVLLLYLRLLRRR 282
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 71-268 2.10e-21

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 88.87  E-value: 2.10e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  71 IGLTLLVVAIVVPVNLVFGTLLAWLVTRFQFPGRQLLLTLIDIPFAVSPVVAGLLYLLFYSTNGPVGGWLDeqgiqlmFA 150
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPG-------LG 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 151 WPGIVLVTIFVTcPFMVRELVPVMMSQGSQEEEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVS 230
Cdd:cd06261   74 LPALILALLLIA-PFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLG 152

                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 746225897 231 GSIRGETYTLPLQVELLHQDYNSVGAFTAAALLTVMAI 268
Cdd:cd06261  153 GGEAPGPGTGLLLIFAILFPGDLGVAAAVALILLLLSL 190
PhnU2 TIGR03262
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ...
 22-288 4.00e-15

putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 274495 [Multi-domain]  Cd Length: 546  Bit Score: 75.10  E-value: 4.00e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897   22 WARTALIALGVILSLIMLVIPLVSIFAAALSH------GLGGVWRNLSDPDMLHAIGLTLLVVAIVVPVNLVFGTLLAWL 95
Cdd:TIGR03262   1 LIARLLLAGMILALLLFLLLPLLALLTKSVYDsdgdfiGLANFAEYFATPGLLQSLGNSLTVSAIVTAIVVPLAFAFAYA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897   96 VTRFQFPGRQLLLTLIDIPFAVSPVVAGLLYLLFYSTNGPVGGWLDEQGIqlmFAWPGIVLVTIFVTCPFMVRELVPVMM 175
Cdd:TIGR03262  81 LTRSRIPGKGAFRLVALLPLLAPSLLPAISLIYLFGNQGLLKGLLGGFSI---YGFWGIVIGEVFYTFPHALMILVTALS 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  176 SQGSQEEEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRgetyTLPLQV--ELLHQDYNS 253
Cdd:TIGR03262 158 LADGRLYEAARAMGASPWRTFFTVTLPGAKYGLISAAFVVFTLVITDFGVPKVIGGDYN----VLATDIykQVIGQQNFP 233

                         250       260       270
                  ....*....|....*....|....*....|....*
gi 746225897  254 VGAFTAAALLtVMAILTLFIKSALQWRVKRQMNKR 288
Cdd:TIGR03262 234 MGAVVGVLLL-LPALLAFGIDRAIQRRQRAQLSSR 267
PRK15050 PRK15050
2-aminoethylphosphonate transport system permease PhnU; Provisional
 13-271 5.75e-15

2-aminoethylphosphonate transport system permease PhnU; Provisional


Pssm-ID: 237888 [Multi-domain]  Cd Length: 296  Bit Score: 73.50  E-value: 5.75e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  13 PHPVRQERNWARTALIALGVILSLIMLVIPLVSIFAAALS--HGLGG-VWRN-LSDPDMLHAIGLTLLVVAIVVPVNLVF 88
Cdd:PRK15050  13 AAAARRRRRLRPLLWLLLPLLVLAPLVVYPLVRVVLQSLTgeHGLGLaTYRAvLGSPDFRGALLTTLQIAFASTAGCLVL 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  89 GTLLAWLVTRFQFPGRQLLLTLIDIPFAVSPVVAGLLYLLFYSTNGPVGGWLDEQG------IQLMFAWPGIVLVTIFVT 162
Cdd:PRK15050  93 GVLLALVLAFVPFPGASLVGRFIDTFVAFPSFLITLAFTFLYGSAGSVNIALQRLFgleappLDFLYSPGGVILAEITFY 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 163 CPFMVRELVPVMMSQGSQEEEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVsGSIRgeTYTLPL 242
Cdd:PRK15050 173 TPFVVRPLLAAFAQLDARQLEAAASLGASPWRVARRVILPEAWPALAAGGSLCLLLTLNEFGIVLFT-GAKD--VVTLPV 249

                        250       260       270
                 ....*....|....*....|....*....|..
gi 746225897 243 QVE---LLHQDYNsvgafTAAALLTVMAILTL 271
Cdd:PRK15050 250 LIYskaIVDFDYP-----TACAIAVVNLALSL 276
UgpE COG0395
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and ...
 17-273 1.91e-13

ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 440164 [Multi-domain]  Cd Length: 282  Bit Score: 68.97  E-value: 1.91e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  17 RQERNWARTALIALGVILSLIMLViPLVSIFAAAL----------------SHGLGGVWRNLSDPDMLHAIGLTLLVVAI 80
Cdd:COG0395    7 RRRRRLGRILLYLLLILLALLFLF-PLYWMVVTSFkppaeifsgppsllpsEFTLENYRAAFTDGPFGRYLLNSLIVAVV 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  81 VVPVNLVFGTLLAWLVTRFQFPGRQLLLTLIDIPFAVSPVVAGL-LYLLFYSTngpvgGWLDEqgiqlmfaWPGIVLVTI 159
Cdd:COG0395   86 STVLSLLLSSLAAYALARFRFRGRKLLFLLILATLMIPGQVLLIpLYLLFRQL-----GLLNT--------YWGLILPYL 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 160 FVTCPFMVrelvpVMMSQGSQE-----EEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTnarAIGE----FGAVSVVS 230
Cdd:COG0395  153 AFGLPFGI-----FLLRQFFRSiprelEEAARIDGASEFRIFWRIVLPLSKPALATVAIFT---FIGAwndfLWPLILLT 224

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 746225897 231 GSirgETYTLPLQV-ELLHQDYNSVGAFTAAALLTVMAILTLFI 273
Cdd:COG0395  225 SP---DLRTLPVGLaSFQGQYGTDWGLLMAAAVIATLPVLILFL 265
ABC_perm1 NF038017
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ...
 74-240 9.74e-13

ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.


Pssm-ID: 411610 [Multi-domain]  Cd Length: 184  Bit Score: 65.26  E-value: 9.74e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  74 TLLVVAIVVPVNLVFGTLLAWLVTRFQFPGRQLLLTLIDIPFAVSPVVAGLLYLLFYSTNGPVGGWldeqgiQLMFAWPG 153
Cdd:NF038017   1 SLRVSGTATLIAALIGIPLGALLALRRFPGRRLVISLLNTLMGLPPVVVGLIVYLLLSRSGPLGFL------GLLYTPTA 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 154 IVLVTIFVTCPFM-------VRELVPVMMSQgsqeeeaAVLLGASGWQVfYRVTLPNIRWALLYGVVLTNARAIGEFGAV 226
Cdd:NF038017  75 MIIAQAVLALPIVagltlaaVQGLDPELRLQ-------ILSLGATRWQA-LWTLLKEARFALLAAVLAGFGRAISEVGAV 146

                        170
                 ....*....|....
gi 746225897 227 SVVSGSIRGETYTL 240
Cdd:NF038017 147 MMVGGNIRGYTRVL 160
COG4132 COG4132
ABC-type uncharacterized transport system, permease component [General function prediction ...
 17-283 9.13e-11

ABC-type uncharacterized transport system, permease component [General function prediction only];


Pssm-ID: 443307 [Multi-domain]  Cd Length: 286  Bit Score: 60.97  E-value: 9.13e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  17 RQERNWARTALIALGV----ILSLIMLVIPLVSIFAAALSHGLGGV----WRNLSDPDMLHAIGLTLLVVAIVVPVNLVF 88
Cdd:COG4132    3 TASRRRRRKWLAWLGLlpffLFVLLFLLLPTVWVVIGAFQDDDGGFtlanYAELTSPFYLQAFWNSIWLSLASALIGAVI 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  89 GTLLAWLVTRFQFPG-RQLLLTLIDIP--FAVSPVVAGLLYLLfySTNGPVGGWLDEQGIQLM-----FAWPGIVLVTIF 160
Cdd:COG4132   83 GLLLAYALRRGGPGWlRRAVLAFSGVAsnFAGVPLAFAFIATL--GRNGLVTLLLKQLGIDLYdgfnlYSFWGLILVYLY 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 161 VTCPFMVRELVPVMMSQGSQEEEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFG-AVSVVSGSIrgetYT 239
Cdd:COG4132  161 FQIPLMVLLLYPALDGLRREWREAAALLGASRWQYWRRVALPVLAPSLLGTFLLLFANAFGAYAtAYALTGGNY----NL 236

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 746225897 240 LPLQV------ELLHQDYnsvgafTAAALLTVMAILTLFIKSALQWRVKR 283
Cdd:COG4132  237 VPIRIgalisgDVLLDPN------LGAALALGMIVIMALVMALYQWLQRR 280
MalG COG3833
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and ...
 20-273 1.15e-10

ABC-type maltose transport system, permease component MalG [Carbohydrate transport and metabolism];


Pssm-ID: 443045 [Multi-domain]  Cd Length: 282  Bit Score: 60.94  E-value: 1.15e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  20 RNWARTALIALGVILSLIMLVIPLVSIFAAALSHGLGGV-------------WRNL-SDPDMLHAIGLTLLVVAIVVPVN 85
Cdd:COG3833   10 RRRLKLGLRHLVLIILAIIALFPILWVVSASFNPGGSLYssslipenftlenYKKLfTETPFLRWFLNSLIVAVVTAIIS 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  86 LVFGTLLAWLVTRFQFPGRQLLLTLIDIpFAVSPVVAGL--LYLLFystngpvggwldeQGIQLMFAWPGIVLVTIFVTC 163
Cdd:COG3833   90 VFLAALAAYAFSRFRFKGRKAGLLALLL-LQMFPAFLALvaLYLLL-------------SALGLLNTLLGLILVYLGGAI 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 164 PFMV-----------RELvpvmmsqgsqeEEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGS 232
Cdd:COG3833  156 PFNTwlmkgyfdtipKEL-----------DEAAKIDGASHFQIFFRIILPLAKPILAVVALLSFIGPWNDFILASVLLRS 224

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 746225897 233 irGETYTLPLQV-ELLHQDYNS-VGAFTAAALLTVMAILTLFI 273
Cdd:COG3833  225 --PENYTLAVGLySFVSDQRNTnWGVFAAGAVLVAIPIVILFL 265
thiP PRK09433
thiamine transporter membrane protein; Reviewed
 6-227 9.18e-10

thiamine transporter membrane protein; Reviewed


Pssm-ID: 181853 [Multi-domain]  Cd Length: 525  Bit Score: 59.08  E-value: 9.18e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897   6 TVTSRRQPHPVrQERNWARTALIALgVILSLIMLVIPLVSIFAAALSHGLGGVWRNlsdPDMLHAIGLTLLVVAIVVPVN 85
Cdd:PRK09433 261 GATLLRGWRDP-QDSLWSRLWDGLL-IVLALLLLLPPLLAVVVSGLNASLLRVLAQ---PALWQALWTSLRIALAAALLA 335

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  86 LVFGTLLAWLVTRFQFPGRQLLLTLID----IPFAVSPVVAGL-LYLLFYSTNGPVGgwldeqgiqlmFAWPGIVLVTIF 160
Cdd:PRK09433 336 VVLTMMLLWSSRELRLRQRKLAAQALElsgmLILAMPGIVLATgLFLLLRNTTDLPA-----------SALGIVILTNAL 404

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 746225897 161 VTCPFMVRELVPVMMSQGSQEEEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVS 227
Cdd:PRK09433 405 MALPYALRVLEPPMRDIAARYGRLCQSLGIRGWSRLRLIELRALRRPLAQAFAFACALSLGDFGVIA 471
thiP PRK09433
thiamine transporter membrane protein; Reviewed
 22-210 3.91e-09

thiamine transporter membrane protein; Reviewed


Pssm-ID: 181853 [Multi-domain]  Cd Length: 525  Bit Score: 57.15  E-value: 3.91e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  22 WARTALIALGVILSLIMLViplvsiFAAALSHGLGGVWRNL-SDPDMLHAIGLTLLVVAIVVPVNLVFGTLLAWLVTRFQ 100
Cdd:PRK09433   2 WLIPGVLAAALLVALALLA------LLALWLHAPGGDWDAVwQDSYLWHVLRFSFWQAFLSALLSVLPAIPLARALYRRR 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 101 FPGRQLLLTLIDIPFaVSPVVAGLLYLL-FYSTNGPVGGWLDEQGIQLMFA---WPGIVLVTIFVTCPFMVRELVPVMMS 176
Cdd:PRK09433  76 FPGRGLLLRLCAMTL-VLPVLVAVFGLLsVYGRSGWLAQLLQALGLEWPFSiygLQGILLAHVFFNLPLATRLLLQALES 154

                        170       180       190
                 ....*....|....*....|....*....|....
gi 746225897 177 QGSQEEEAAVLLGASGWQVFYRVTLPNIRWALLY 210
Cdd:PRK09433 155 IPAEQRQLAAQLGMRGWQFFRLVEWPYLRRQLPP 188
PRK10592 PRK10592
putrescine transporter subunit: membrane component of ABC superfamily; Provisional
 24-244 1.70e-08

putrescine transporter subunit: membrane component of ABC superfamily; Provisional


Pssm-ID: 182574  Cd Length: 281  Bit Score: 54.47  E-value: 1.70e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  24 RTALIALGVIL---SLIMLVI------PLVSIFAAALSHGLGGVWRnlsDPDMLHAIGLTLLVVAIVVPVNLVFGTLLAW 94
Cdd:PRK10592  12 RIVILVLGFTFlyaPMLMLVIysfnssKLVTVWAGWSTRWYGELFR---DDAMMSAVGLSLTIAACAATAAAILGTIAAV 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  95 LVTRF-QFPGRQLLLTLIDIPFAVSPVVAGLLYLLFYSTNGPVGGWLDEQGiqlmfawpgivLVTIFVTCPFMVRELVPV 173
Cdd:PRK10592  89 VMVRFgRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALAHAIGWPADRG-----------MLTIWLAHVTFCTAYVAV 157

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 746225897 174 MMSQGSQE-----EEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSirGETyTLPLQV 244
Cdd:PRK10592 158 VISSRLREldrsiEEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIASFVSGP--GAT-TLPMLV 230
phosphate_pstC TIGR02138
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ...
 182-282 1.57e-06

phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273992 [Multi-domain]  Cd Length: 295  Bit Score: 48.42  E-value: 1.57e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  182 EEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSG--------SIRGETYTLPLQVELLHQD--- 250
Cdd:TIGR02138 182 KEASYALGATKWETIRRVILPAARSGIVGAVVLGLGRALGETMAVTMVIGnvfpisplSLFDPGTTITSLIANQFGEasg 261

                          90       100       110
                  ....*....|....*....|....*....|....
gi 746225897  251 --YNSVGAFTAAALLTVMAILTLFIKSALQWRVK 282
Cdd:TIGR02138 262 gsVHTSALFALGLVLFVITLLVNILARYIVRRRR 295
PstA COG0581
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 40-273 5.63e-06

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440346 [Multi-domain]  Cd Length: 259  Bit Score: 46.57  E-value: 5.63e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  40 VIPLVSIFAAALSHGLGGV-WRNLSDPD--------MLHAIGLTLLVVAIVVPVNLVFGTLLAWLVTRFQFPGR--QLLL 108
Cdd:COG0581    3 LLPLVWILGTVLVKGLPALsWEFLTSSPspgpegggILPAIVGTLLLVLLATLIAVPLGVLAAIYLAEYARGGRlaRLIR 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 109 TLIDIPFAVSPVVAGLL-YLLF-YSTNGPVGGWLdeqgiqlmfawpGIVLVTIFVTcPFMVR------ELVPVMMsqgsq 180
Cdd:COG0581   83 FAIDVLAGVPSIVYGLFgYALFvLTLGLGFSLLA------------GALALALLML-PVVIRtteealRLVPNSL----- 144

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 181 eEEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGE-------FGAVSVVSGSIRGETYTLPLQVellhqdYNS 253
Cdd:COG0581  145 -REASYALGATKWQTIRKVVLPAALPGILTGVILAIARAAGEtapllftAGVSPFLPLSLFDPFATLPVHI------YNL 217

                        250       260
                 ....*....|....*....|....*....
gi 746225897 254 VG---------AFTAAALLTVMaILTLFI 273
Cdd:COG0581  218 ASspypaaqelAWAAALVLLLL-VLLLNL 245
3a0107s02c TIGR00974
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ...
 32-283 1.76e-05

phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273373  Cd Length: 271  Bit Score: 45.30  E-value: 1.76e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897   32 VILSLIMLVIPLVSIFAAALSHGLGGV-WRNLSDPD--------MLHAIGLTLLVVAIVVPVNLVFGTLLAWLVTRFQFP 102
Cdd:TIGR00974   8 SLLSALLALLPLIWILWYILIKGLPALnLEFFTKSPtptgaeggIGPAIVGTLLLTLLAIVIAVPLGIGAAIYLAEYANG 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  103 GR--QLLLTLIDIPFAVSPVVAGLL-YLLFYSTNGPVGGWLDEQGIQLMFawpgIVLVTIFVTCPFMVReLVPvmmsqgS 179
Cdd:TIGR00974  88 SRftKIIRFAVDILAGVPSIVVGLFgYGFFVLTYLGGGFSLLAGALALAL----LILPVIIRTTEEALK-AVP------K 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  180 QEEEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSG-------SIRGETYTLPLQV-----ELL 247
Cdd:TIGR00974 157 DLREASLALGATKWQTIFKVVLPAALPGILTGIILSIARAAGETAPLLFTAGgsaftppNLFDPFATLPVLIynlasEGP 236

                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 746225897  248 HQDYNSVgAFTAAALLTVMAILTLFIKSALQWRVKR 283
Cdd:TIGR00974 237 YVEAQQL-AWAAALVLIVLVLLLNLIARLLRRRFKK 271
potB PRK09497
spermidine/putrescine ABC transporter membrane protein; Reviewed
 86-288 3.02e-05

spermidine/putrescine ABC transporter membrane protein; Reviewed


Pssm-ID: 181910  Cd Length: 285  Bit Score: 44.68  E-value: 3.02e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  86 LVFGTLLAWLVTRFQFPGRQLLLTLIDIPFAVSPVVAGLLYLLFYSTNGPVGGWLDEQG-----IQLMFAWPGIVLVTIF 160
Cdd:PRK09497  80 LVLGYPFAWFLAKLPHKVRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGvidtpIRIMFTESAVIIGLVY 159

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 161 VTCPFMVRELVPVMMSQGSQEEEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEF-------GAVSVVSGSI 233
Cdd:PRK09497 160 ILLPFMVLPLYSSIEKLDKPLLEAARDLGANKLQTFIRIIIPLTMPGIIAGCLLVLLPAMGMFyvsdllgGAKNLLIGNV 239

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 746225897 234 rgetytlpLQVELLHQDYNSVGAFTAAALLTVMAILTLfiksaLQWRVKRQMNKR 288
Cdd:PRK09497 240 --------IKSQFLNIRDWPFGAATSITLTIVMGLMLL-----VYYRASKLLNKK 281
thiP TIGR01253
thiamine ABC transporter, permease protein; The model describes thiamine ABC transporter, ...
 32-273 7.86e-05

thiamine ABC transporter, permease protein; The model describes thiamine ABC transporter, permease protein in bacteria. The protein belongs to the larger ABC transport system. It consists of atleast three components: the inner mebrane permease; thiamine binding protein; an ATP-binding subunit. It has been experimentally demonstrated that the mutants in the various steps in the de novo synthesis of the thiamine and the biologically active form, namely thiamine pyrophosphate can be exogenously supplemented with thiamine, thiamine monophosphate (TMP) or thiamine pyrophosphate (TPP). [Transport and binding proteins, Other]


Pssm-ID: 130320 [Multi-domain]  Cd Length: 519  Bit Score: 43.75  E-value: 7.86e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897   32 VILSLIMLVIPLVSIFAAALSH-GLGGVWRNlsdPDMLHAIGLTLLVVAIVVPVNLVFGTLLAWLVTRFQFPGRQLLLTL 110
Cdd:TIGR01253 288 ILLALFFLFPPLLAIIIDALNSrNLLEVLAN---PQLWQALGTSLRIALAAALLALTLAIALLLLSRELEALHKMKAGQF 364

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  111 IDIPFAVSPVVAGLLYL--LFYSTNGPVGGWLDEQGIqlmfawpgIVLVTIFVTCPFMVRELVPVMMSQGSQEEEAAVLL 188
Cdd:TIGR01253 365 IEMAGMLILAIPGIVLAmgFFLLLNDRDFLNIDADGI--------VIFCNALMAIPFALKILEAPFHDIMARYEMLCNSL 436

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  189 GASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSirgETYTLP-LQVELLHQDYNSVGAFTAAALLTVMA 267
Cdd:TIGR01253 437 GIEGWQRFKLIELKALKAPLAQAFAFACALSIGDFGAIALFGND---DFRSLPfLLYQQIGNYRNQDAAVTAGILLLLCF 513


                  ....*.
gi 746225897  268 ILTLFI 273
Cdd:TIGR01253 514 ILFAFI 519
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 89-283 2.27e-04

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 41.13  E-value: 2.27e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897   89 GTLLAWLVTRFQ-FPGRQLLLTLIDIPFAVsPVVAGLLYLLFYSTNGPVGgwldeqgiqlmFAWPGIVLVTIFVTCPFMV 167
Cdd:pfam00528   1 GIPLGIIAALRRgRRLDRLLRPLIDLLQAL-PSFVLAILLVVIAILSILG-----------HGILPAIILALLGWAGYAR 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  168 RELVPVMMSQGSQEEEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVsGSIRGETYTLPLQVELL 247
Cdd:pfam00528  69 LIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFL-GSWPGLGLLLIEAILGY 147

                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 746225897  248 HQDYNSVGAFTAAALLTVMAILTLFIKSALQWRVKR 283
Cdd:pfam00528 148 DYPEIQGPVLAAALILLLLNLLVDILQRLLDPRVRK 183
PstC COG0573
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 182-284 4.38e-04

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440338 [Multi-domain]  Cd Length: 303  Bit Score: 41.23  E-value: 4.38e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 182 EEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSG-------SIRGETYTLP--LQVELLHQDYN 252
Cdd:COG0573  187 REAALALGATRWETIRKVVLPAARSGIIAAVILGLGRALGETMAVLMVAGnapqipfSLFDPGRTLTalIALEFGEAPFG 266

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 746225897 253 SVG---AFTAAALLTVMAILTLFIKSALQWRVKRQ 284
Cdd:COG0573  267 SLHysaLFALGLVLFVITLLVNLLARLIVRRYREK 301
thiP TIGR01253
thiamine ABC transporter, permease protein; The model describes thiamine ABC transporter, ...
 32-205 7.54e-04

thiamine ABC transporter, permease protein; The model describes thiamine ABC transporter, permease protein in bacteria. The protein belongs to the larger ABC transport system. It consists of atleast three components: the inner mebrane permease; thiamine binding protein; an ATP-binding subunit. It has been experimentally demonstrated that the mutants in the various steps in the de novo synthesis of the thiamine and the biologically active form, namely thiamine pyrophosphate can be exogenously supplemented with thiamine, thiamine monophosphate (TMP) or thiamine pyrophosphate (TPP). [Transport and binding proteins, Other]


Pssm-ID: 130320 [Multi-domain]  Cd Length: 519  Bit Score: 40.67  E-value: 7.54e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897   32 VILSLIMLVI--PLVSIFAAALSHGLGGVWrnlSDPDMLHAIGLTLLVVAIVVPVNLVFGTLLAWLVTRFQFPGRQLLLT 109
Cdd:TIGR01253  11 SAISFIIAFAgaAFLAIFALAGEDDWRAVF---QDDYLQHLILFSFGQAFLSALLSIFFAIFLARALFRKPFLGKKALLK 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  110 LIDIPFAVSPVVAGLLYLLFYSTNGPVGGWLDEQGIQLMF---AWPGIVLVTIFVTCPFMVRELVPVMMSQGSQEEEAAV 186
Cdd:TIGR01253  88 LCALTFILPALVAIFGIIGIYGRQGWLATLANLFGLEWQFhiyGLQGILIAHLFFNIPLAAQLFLQALENIPGEQRQLAA 167

                         170
                  ....*....|....*....
gi 746225897  187 LLGASGWQVFYRVTLPNIR 205
Cdd:TIGR01253 168 QLGLQGWHFFKFVEWPVFR 186
pstC PRK11275
phosphate ABC transporter permease PstC;
25-231 1.40e-03

phosphate ABC transporter permease PstC;


Pssm-ID: 183070  Cd Length: 319  Bit Score: 39.68  E-value: 1.40e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  25 TALIALGVILSLIMLVIPLVSIFaaalshGLGGVWRNLSDPDM-----LHAIGLTLL--VVAIVVPVNLVFGTLL----- 92
Cdd:PRK11275  30 TLLLLGGIIVSLIISSWPSIQKF------GLSFLWTKEWDAPNdiygaLVPIYGTLVtsFIALLIAVPVSFGIALfltel 103

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  93 --AWLvtrfqfpgRQLLLTLIDIPFAVSPVVAGLLYLLFYST------NGPVGGWLDEQGI-QLMFAWP--GIVLVTIFV 161
Cdd:PRK11275 104 apGWL--------KRPLGIAIELLAAIPSIVYGMWGLFVFAPlfatyfQEPVGNVLSNIPIvGALFSGPafGIGILAAGV 175

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897 162 TCPFM-----------VRELVPVMMsqgsqeEEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVS 230
Cdd:PRK11275 176 ILAIMiipyiaavmrdVFEQTPVMM------KESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLGLGRALGETMAVTFII 249


                 .
gi 746225897 231 G 231
Cdd:PRK11275 250 G 250
PhnU2 TIGR03262
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ...
 13-288 7.06e-03

putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 274495 [Multi-domain]  Cd Length: 546  Bit Score: 37.74  E-value: 7.06e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897   13 PHPVRQERNWARTALIALGVILSLIMLVI-PLVSIFAAALSHGLGGVWRNLSDPDMLHAIGLTLLVVAIVVPVNLVFGTL 91
Cdd:TIGR03262 275 PNRVRDAACLVYCAIISAALLAVVGMAVYaSLVKFWPYNLSLTLKHYNFDLMDGGGWEAYKNSLRLAATTALIGTILVFG 354

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897   92 LAWLVTRFQFPG--RQLLLTLIDIPFAVSPVVAGLLYLLFYST-NGPVGGWLDEQGIqlmfawpgIVLVTI--FVTCPFM 166
Cdd:TIGR03262 355 GAYLIEKTRGFGllRGVLRFLAILPMAVPGLVLGLGYIFFFNApTNPLNGLYGTMAL--------LVLCTVvhFYTVSHL 426

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746225897  167 VreLVPVMMSQGSQEEEAAVLLGASGWQVFYRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSirgetYTLPLQVEL 246
Cdd:TIGR03262 427 T--AVTALKQIDSEFEAVSASLKVPFYKTFLRVTLPVCLPAILDIARYLFVNSMTTVSAVVFLYSP-----DTKLASVAI 499

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 746225897  247 LHQDyNSVGAFTAAALLTVMAILTLFIKSALQWRVKRQMNKR 288
Cdd:TIGR03262 500 LNMD-DAGDIAPAAAMATLIVLTSAVAKLLFALASRRLLRRT 540
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH