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Conserved domains on  [gi|749817220|ref|WP_040296053|]
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MULTISPECIES: DUF2975 domain-containing protein [Barnesiella]

Protein Classification

DUF2975 domain-containing protein( domain architecture ID 10567761)

uncharacterized DUF2975 domain-containing protein, possibly an integral membrane protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2975 pfam11188
Protein of unknown function (DUF2975); This family of bacterial proteins have no known ...
 89-212 1.15e-08

Protein of unknown function (DUF2975); This family of bacterial proteins have no known function. These proteins are likely to be integral membrane proteins. The proteins contain a highly conserved glutamic acid close to their C-terminus.


:

Pssm-ID: 463239  Cd Length: 130  Bit Score: 51.46  E-value: 1.15e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749817220   89 PASTTPVA--LSISSVILTGLSFIALICMIIKLVQLIKSVASDGLMNRRNIKRLRLLSYfMITFYLVSYIDSFITTSYYR 166
Cdd:pfam11188   6 LAELYPEFayLRVPVLLVGYLAAIPFQVALVQLWRLLRSIRKDRAFSEANVRRLRVIGY-AAVAIAVLYVAGGVFLYFLA 84

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 749817220  167 SHLSLGDNQICYPELSASVTIAFILLLLAEILNIAYKQREELDLTI 212
Cdd:pfam11188  85 AVLAPGILLLLLGVIFASLVIGLLVLVLRELLAQALALKEENDLTI 130
 
Name Accession Description Interval E-value
DUF2975 pfam11188
Protein of unknown function (DUF2975); This family of bacterial proteins have no known ...
 89-212 1.15e-08

Protein of unknown function (DUF2975); This family of bacterial proteins have no known function. These proteins are likely to be integral membrane proteins. The proteins contain a highly conserved glutamic acid close to their C-terminus.


Pssm-ID: 463239  Cd Length: 130  Bit Score: 51.46  E-value: 1.15e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749817220   89 PASTTPVA--LSISSVILTGLSFIALICMIIKLVQLIKSVASDGLMNRRNIKRLRLLSYfMITFYLVSYIDSFITTSYYR 166
Cdd:pfam11188   6 LAELYPEFayLRVPVLLVGYLAAIPFQVALVQLWRLLRSIRKDRAFSEANVRRLRVIGY-AAVAIAVLYVAGGVFLYFLA 84

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 749817220  167 SHLSLGDNQICYPELSASVTIAFILLLLAEILNIAYKQREELDLTI 212
Cdd:pfam11188  85 AVLAPGILLLLLGVIFASLVIGLLVLVLRELLAQALALKEENDLTI 130
 
Name Accession Description Interval E-value
DUF2975 pfam11188
Protein of unknown function (DUF2975); This family of bacterial proteins have no known ...
 89-212 1.15e-08

Protein of unknown function (DUF2975); This family of bacterial proteins have no known function. These proteins are likely to be integral membrane proteins. The proteins contain a highly conserved glutamic acid close to their C-terminus.


Pssm-ID: 463239  Cd Length: 130  Bit Score: 51.46  E-value: 1.15e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749817220   89 PASTTPVA--LSISSVILTGLSFIALICMIIKLVQLIKSVASDGLMNRRNIKRLRLLSYfMITFYLVSYIDSFITTSYYR 166
Cdd:pfam11188   6 LAELYPEFayLRVPVLLVGYLAAIPFQVALVQLWRLLRSIRKDRAFSEANVRRLRVIGY-AAVAIAVLYVAGGVFLYFLA 84

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 749817220  167 SHLSLGDNQICYPELSASVTIAFILLLLAEILNIAYKQREELDLTI 212
Cdd:pfam11188  85 AVLAPGILLLLLGVIFASLVIGLLVLVLRELLAQALALKEENDLTI 130
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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