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Conserved domains on  [gi|752540896|ref|WP_041212343|]
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DUF6314 family protein [Aeromonas caviae]

Protein Classification

DUF6314 superfamily-containing protein( domain architecture ID 1906165)

DUF6314 superfamily-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF6314 super family cl45226
Family of unknown function (DUF6314); This family of proteins is functionally uncharacterized. ...
 29-150 4.67e-08

Family of unknown function (DUF6314); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 138 and 177 amino acids in length.


The actual alignment was detected with superfamily member pfam19834:

Pssm-ID: 437666  Cd Length: 132  Bit Score: 48.79  E-value: 4.67e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752540896   29 VGSATDWCGRGEGAVVVT-DHHGGWLYAETGRYTTPHGRELTMHNRFWWQRTARGImlsHLRYEQPVMLFELLPRGDGHW 107
Cdd:pfam19834  12 VDRRAGPTGTFTGTARFTpDDDDGLLYREEGTLRLGGGRPLPATRRYLYRLEDGGI---EVFFADGRLFHRLDLRGGGRA 88

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 752540896  108 VTAepHLCGQDHYSAELTETGEG-FLLTWQITGPRKNERLSYRY 150
Cdd:pfam19834  89 EAH--HLCGPDLYRVRYDFSDWPrWTVRWRVTGPRKDYVLTTRY 130
 
Name Accession Description Interval E-value
DUF6314 pfam19834
Family of unknown function (DUF6314); This family of proteins is functionally uncharacterized. ...
 29-150 4.67e-08

Family of unknown function (DUF6314); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 138 and 177 amino acids in length.


Pssm-ID: 437666  Cd Length: 132  Bit Score: 48.79  E-value: 4.67e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752540896   29 VGSATDWCGRGEGAVVVT-DHHGGWLYAETGRYTTPHGRELTMHNRFWWQRTARGImlsHLRYEQPVMLFELLPRGDGHW 107
Cdd:pfam19834  12 VDRRAGPTGTFTGTARFTpDDDDGLLYREEGTLRLGGGRPLPATRRYLYRLEDGGI---EVFFADGRLFHRLDLRGGGRA 88

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 752540896  108 VTAepHLCGQDHYSAELTETGEG-FLLTWQITGPRKNERLSYRY 150
Cdd:pfam19834  89 EAH--HLCGPDLYRVRYDFSDWPrWTVRWRVTGPRKDYVLTTRY 130
 
Name Accession Description Interval E-value
DUF6314 pfam19834
Family of unknown function (DUF6314); This family of proteins is functionally uncharacterized. ...
 29-150 4.67e-08

Family of unknown function (DUF6314); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 138 and 177 amino acids in length.


Pssm-ID: 437666  Cd Length: 132  Bit Score: 48.79  E-value: 4.67e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752540896   29 VGSATDWCGRGEGAVVVT-DHHGGWLYAETGRYTTPHGRELTMHNRFWWQRTARGImlsHLRYEQPVMLFELLPRGDGHW 107
Cdd:pfam19834  12 VDRRAGPTGTFTGTARFTpDDDDGLLYREEGTLRLGGGRPLPATRRYLYRLEDGGI---EVFFADGRLFHRLDLRGGGRA 88

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 752540896  108 VTAepHLCGQDHYSAELTETGEG-FLLTWQITGPRKNERLSYRY 150
Cdd:pfam19834  89 EAH--HLCGPDLYRVRYDFSDWPrWTVRWRVTGPRKDYVLTTRY 130
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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