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Conserved domains on  [gi|754492537|ref|WP_041909432|]
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MULTISPECIES: flagellar biosynthesis protein FlhB [Enterobacter]

Protein Classification

flagellar type III secretion system protein FlhB( domain architecture ID 10012530)

flagellar type III secretion system protein FlhB may be involved in the export of flagellum proteins; belongs to the EscU/YscU/HrcU family of type III secretion system proteins

Gene Symbol:  flhB
Gene Ontology:  GO:0009306|GO:0044780|GO:0016020
PubMed:  32157081|26244937

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
flhB PRK05702
flagellar type III secretion system protein FlhB;
1-358 0e+00

flagellar type III secretion system protein FlhB;


:

Pssm-ID: 235569  Cd Length: 359  Bit Score: 570.56  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537   1 MAEENDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILIVGVCIIWWGGESLARKLAGMLSTGLRFDHSMVNDPNLILSQ 80
Cdd:PRK05702   2 AEDDDDEKTEEPTPKKLEKAREKGQVPRSRELNTAASLLAGLVVLWFFGPSLARRLSGMLRALFSFDREIIFDPNDVLSL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537  81 IIQLIKGAMVALLPLITGVVLVALVSPVMLGGLVFSGKSLQPKFSKLNPLPGIAKMFSAQTGAELLKAILKSVLMGSSAG 160
Cdd:PRK05702  82 FLLLLLEALLALLPILLLLVLAALLAPVLQGGLLFSPKALKPKFSKLNPLKGLKRMFSAQGLVELLKSLLKVLLVGGVAY 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537 161 FFLWYHWPEMMRLISESPLTAMSNALNLVGLCALLVVLSIIPMVGFDVIFQLYSHFKKLRMSRQDIRDEYKQMEGDPHVK 240
Cdd:PRK05702 162 FVLWSNLDELLSLAAEPLEAALGHALDLVLKLLLLVVLALLVIAAIDVPFQRWQYLKKLKMTKQEVKDEHKQSEGDPEVK 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537 241 GRIRQMQRAAARRRMMEDVPKADVIVTNPTHYSVALRYDENKMSAPKVVAKGAGLIALRIREIGTENRVPILEAPPLARA 320
Cdd:PRK05702 242 GRIRQLQREMARRRMMAAVPKADVVITNPTHYAVALKYDRGKMAAPVVVAKGVDEVALKIREIAREHNVPIVENPPLARA 321

                        330       340       350
                 ....*....|....*....|....*....|....*...
gi 754492537 321 LYRHADIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358
Cdd:PRK05702 322 LYATVEIGQEIPEELYKAVAEVLAYVYQLKRWRKGGGQ 359
 
Name Accession Description Interval E-value
flhB PRK05702
flagellar type III secretion system protein FlhB;
1-358 0e+00

flagellar type III secretion system protein FlhB;


Pssm-ID: 235569  Cd Length: 359  Bit Score: 570.56  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537   1 MAEENDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILIVGVCIIWWGGESLARKLAGMLSTGLRFDHSMVNDPNLILSQ 80
Cdd:PRK05702   2 AEDDDDEKTEEPTPKKLEKAREKGQVPRSRELNTAASLLAGLVVLWFFGPSLARRLSGMLRALFSFDREIIFDPNDVLSL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537  81 IIQLIKGAMVALLPLITGVVLVALVSPVMLGGLVFSGKSLQPKFSKLNPLPGIAKMFSAQTGAELLKAILKSVLMGSSAG 160
Cdd:PRK05702  82 FLLLLLEALLALLPILLLLVLAALLAPVLQGGLLFSPKALKPKFSKLNPLKGLKRMFSAQGLVELLKSLLKVLLVGGVAY 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537 161 FFLWYHWPEMMRLISESPLTAMSNALNLVGLCALLVVLSIIPMVGFDVIFQLYSHFKKLRMSRQDIRDEYKQMEGDPHVK 240
Cdd:PRK05702 162 FVLWSNLDELLSLAAEPLEAALGHALDLVLKLLLLVVLALLVIAAIDVPFQRWQYLKKLKMTKQEVKDEHKQSEGDPEVK 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537 241 GRIRQMQRAAARRRMMEDVPKADVIVTNPTHYSVALRYDENKMSAPKVVAKGAGLIALRIREIGTENRVPILEAPPLARA 320
Cdd:PRK05702 242 GRIRQLQREMARRRMMAAVPKADVVITNPTHYAVALKYDRGKMAAPVVVAKGVDEVALKIREIAREHNVPIVENPPLARA 321

                        330       340       350
                 ....*....|....*....|....*....|....*...
gi 754492537 321 LYRHADIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358
Cdd:PRK05702 322 LYATVEIGQEIPEELYKAVAEVLAYVYQLKRWRKGGGQ 359
FlhB COG1377
Flagellar biosynthesis protein FlhB [Cell motility];
1-351 0e+00

Flagellar biosynthesis protein FlhB [Cell motility];


Pssm-ID: 440987  Cd Length: 352  Bit Score: 523.91  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537   1 MAEEND-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILIVGVCIIWWGGESLARKLAGMLSTGLRFDHSMVNDPNLILS 79
Cdd:COG1377    1 MAEEDDgEKTEEPTPKRLRDAREKGQVARSRELTTALVLLAGLLLLLFLGPSLAERLGELLRSLLSFARALALDPADLLA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537  80 QIIQLIKGAMVALLPLITGVVLVALVSPVMLGGLVFSGKSLQPKFSKLNPLPGIAKMFSAQTGAELLKAILKSVLMGSSA 159
Cdd:COG1377   81 LLGALLLEALLALLPLLLVLALAALLANLLQGGFLFSTKALKPKFSRLNPISGLKRLFSLRALVELLKSLLKLLLVGGVA 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537 160 GFFLWYHWPEMMRLISESPLTAMSNALNLVGLCALLVVLSIIPMVGFDVIFQLYSHFKKLRMSRQDIRDEYKQMEGDPHV 239
Cdd:COG1377  161 YLVLRGELPELLALAALPLAAALALLGDLLLKLLLAVLLALLVIAAIDYPYQRWEHEKKLRMTKQEVKDEHKESEGDPEV 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537 240 KGRIRQMQRAAARRRMMEDVPKADVIVTNPTHYSVALRYDENKMSAPKVVAKGAGLIALRIREIGTENRVPILEAPPLAR 319
Cdd:COG1377  241 KGRIRQLQREMARRRMMAAVPKADVVITNPTHYAVALKYDPGKMGAPVVVAKGADEVALRIREIAREHGVPIVENPPLAR 320

                        330       340       350
                 ....*....|....*....|....*....|..
gi 754492537 320 ALYRHADIGQQIPGQLYAAVAEVLAWVWQLKR 351
Cdd:COG1377  321 ALYATVEVGQEIPEELYQAVAEVLAYVYQLKR 352
flhB TIGR00328
flagellar biosynthetic protein FlhB; FlhB and its functionally equivalent orthologs, from ...
 7-353 1.93e-179

flagellar biosynthetic protein FlhB; FlhB and its functionally equivalent orthologs, from among a larger superfamily of proteins involved in type III protein export systems, are specifically involved in flagellar protein export. The seed members are restricted and the trusted cutoff is set high such that the proteins gathered by this model play roles specifically related to flagellar structures. Full-length homologs scoring below the trusted cutoff are involved in peptide export but not necessarily in the creation of flagella. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 129428  Cd Length: 347  Bit Score: 502.18  E-value: 1.93e-179
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537    7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILIVGVCIIWWGGESLARKLAGMLSTGLRFDHSMVNDPNLILSQIIQLIK 86
Cdd:TIGR00328   1 EKTEEPTPKKLRKAREEGNVPKSREVNSAAVLLAGVLSLLFFGDGLADLLVVLMSFFLSFETSDILNLGSLVGIFFQSIR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537   87 GAMVALLPLITGVVLVALVSPVMLGGLVFSGKSLQPKFSKLNPLPGIAKMFSAQTGAELLKAILKSVLMGSSAGFFLWYH 166
Cdd:TIGR00328  81 EVLLLLLPIFVLLLVVGVLSNIAQFGFLFTTKPLKPKFSKINPIKGLKRLFSLQSLVELLKSLLKVFLVSFVAYFVLRNS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537  167 WPEMMRLISESPLTAMSNALNLVGLCALLVVLSIIPMVGFDVIFQLYSHFKKLRMSRQDIRDEYKQMEGDPHVKGRIRQM 246
Cdd:TIGR00328 161 LGELLSLSLYSLVQAITNFLDIAKSLLILVLLLLLVIAVFDYFFQRWQYIKSLKMTKQEVKDELKQSEGDPEVKGRIRQM 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537  247 QRAAARRRMMEDVPKADVIVTNPTHYSVALRYDENKMSAPKVVAKGAGLIALRIREIGTENRVPILEAPPLARALYRHAD 326
Cdd:TIGR00328 241 QREAARRRMMQEVPKADVVITNPTHYAVALKYDPGKMPAPVVVAKGVDELALKIKEIARENNVPIVENPPLARALYRQVE 320

                         330       340
                  ....*....|....*....|....*..
gi 754492537  327 IGQQIPGQLYAAVAEVLAWVWQLKRWR 353
Cdd:TIGR00328 321 IGQEIPPELYKAVAEVLAYVYKLKKKR 347
Bac_export_2 pfam01312
FlhB HrpN YscU SpaS Family; This family includes the following members: FlhB, HrpN, YscU, SpaS, ...
 7-346 6.71e-172

FlhB HrpN YscU SpaS Family; This family includes the following members: FlhB, HrpN, YscU, SpaS, HrcU SsaU and YopU. All of these proteins export peptides using the type III secretion system. The peptides exported are quite diverse.


Pssm-ID: 460157  Cd Length: 338  Bit Score: 482.71  E-value: 6.71e-172
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537    7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILIVGVCIIWWGGESLARKLAGMLSTGLRFDHsmVNDPNLILSQIIQLIK 86
Cdd:pfam01312   1 EKTEEPTPKKLRDAREKGQVAKSRELTSAAVLLAGLLALLFLGPFLLERLAELFRSVLSFDR--AADPAALLALLLALLL 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537   87 GAMVALLPLITGVVLVALVSPVMLGGLVFSGKSLQPKFSKLNPLPGIAKMFSAQTGAELLKAILKSVLMGSSAGFFLWYH 166
Cdd:pfam01312  79 ELLLLLLPLLLVLLLAALLANLLQVGFLFSTKALKPKFSKLNPISGLKRIFSLRSLVELLKSLLKVAVVGAVAYLVLRGN 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537  167 WPEMMRLISESPLTAMSNALNLVGLCALLVVLSIIPMVGFDVIFQLYSHFKKLRMSRQDIRDEYKQMEGDPHVKGRIRQM 246
Cdd:pfam01312 159 LPELLALADLPLEAALALLGDLLLKLLLAVLLALLVIAAIDYPYQRWQFEKKLKMTKQEVKDEYKESEGDPEIKGRIRQL 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537  247 QRAAARRRMMEDVPKADVIVTNPTHYSVALRYDENKMSAPKVVAKGAGLIALRIREIGTENRVPILEAPPLARALYRHAD 326
Cdd:pfam01312 239 QREMARRRMMAEVPKADVVITNPTHYAVALKYDPGKMPAPVVVAKGADELALRIREIAREHGVPIVENPPLARALYATVE 318

                         330       340
                  ....*....|....*....|
gi 754492537  327 IGQQIPGQLYAAVAEVLAWV 346
Cdd:pfam01312 319 VGQEIPEELYQAVAEVLAYV 338
 
Name Accession Description Interval E-value
flhB PRK05702
flagellar type III secretion system protein FlhB;
1-358 0e+00

flagellar type III secretion system protein FlhB;


Pssm-ID: 235569  Cd Length: 359  Bit Score: 570.56  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537   1 MAEENDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILIVGVCIIWWGGESLARKLAGMLSTGLRFDHSMVNDPNLILSQ 80
Cdd:PRK05702   2 AEDDDDEKTEEPTPKKLEKAREKGQVPRSRELNTAASLLAGLVVLWFFGPSLARRLSGMLRALFSFDREIIFDPNDVLSL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537  81 IIQLIKGAMVALLPLITGVVLVALVSPVMLGGLVFSGKSLQPKFSKLNPLPGIAKMFSAQTGAELLKAILKSVLMGSSAG 160
Cdd:PRK05702  82 FLLLLLEALLALLPILLLLVLAALLAPVLQGGLLFSPKALKPKFSKLNPLKGLKRMFSAQGLVELLKSLLKVLLVGGVAY 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537 161 FFLWYHWPEMMRLISESPLTAMSNALNLVGLCALLVVLSIIPMVGFDVIFQLYSHFKKLRMSRQDIRDEYKQMEGDPHVK 240
Cdd:PRK05702 162 FVLWSNLDELLSLAAEPLEAALGHALDLVLKLLLLVVLALLVIAAIDVPFQRWQYLKKLKMTKQEVKDEHKQSEGDPEVK 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537 241 GRIRQMQRAAARRRMMEDVPKADVIVTNPTHYSVALRYDENKMSAPKVVAKGAGLIALRIREIGTENRVPILEAPPLARA 320
Cdd:PRK05702 242 GRIRQLQREMARRRMMAAVPKADVVITNPTHYAVALKYDRGKMAAPVVVAKGVDEVALKIREIAREHNVPIVENPPLARA 321

                        330       340       350
                 ....*....|....*....|....*....|....*...
gi 754492537 321 LYRHADIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQ 358
Cdd:PRK05702 322 LYATVEIGQEIPEELYKAVAEVLAYVYQLKRWRKGGGQ 359
flhB PRK12468
flagellar biosynthesis protein FlhB; Reviewed
 1-382 0e+00

flagellar biosynthesis protein FlhB; Reviewed


Pssm-ID: 171522  Cd Length: 386  Bit Score: 569.28  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537   1 MAEEND-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILIVGVCIIWWGGESLARKLAGMLSTGLRFDHSMVNDPNLILS 79
Cdd:PRK12468   1 MAEDSDqEKSEEPTASKLEKAREKGQIPRSRELTSMLMLGAGLTILWMSGESMARQLSAMVAQGLHFDHSMVSNDKQMLR 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537  80 QIIQLIKGAMVALLPLITGVVLVALVSPVMLGGLVFSGKSLQPKFSKLNPLPGIAKMFSAQTGAELLKAILKSVLMGSSA 159
Cdd:PRK12468  81 QIGMLLRQTLLAMLPIFAGLVIVALAVPMLLGGVLFSGESIKFDLKRMSPVAGLKRMFSSQALAELLKAILKATLVGWVT 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537 160 GFFLWYHWPEMMRLISESPLTAMSNALNLVGLCALLVVLSIIPMVGFDVIFQLYSHFKKLRMSRQDIRDEYKQMEGDPHV 239
Cdd:PRK12468 161 GLFLWHNWPDMMRLIAAPPVAALGDALHLIIFCGLVVVLGLSPMVGFDVFYQITSHIKKLRMTKQDIRDEFKNQEGDPHV 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537 240 KGRIRQMQRAAARRRMMEDVPKADVIVTNPTHYSVALRYDENKMSAPKVVAKGAGLIALRIREIGTENRVPILEAPPLAR 319
Cdd:PRK12468 241 KGRIRQQQRAMARRRMMVDVPKADVIVTNPTHYAVALQYNESKMSAPKVLAKGAGAVALRIRELGAEHRIPLLEAPPLAR 320

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 754492537 320 ALYRHADIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPVKPENLPVPAALDFMNEKDTDG 382
Cdd:PRK12468 321 ALFRHSEVGQHIPATLYAAVAEVLAWVYQLKRWKREGGLIPKKPEHLPVPEALDFATESETKS 383
FlhB COG1377
Flagellar biosynthesis protein FlhB [Cell motility];
1-351 0e+00

Flagellar biosynthesis protein FlhB [Cell motility];


Pssm-ID: 440987  Cd Length: 352  Bit Score: 523.91  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537   1 MAEEND-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILIVGVCIIWWGGESLARKLAGMLSTGLRFDHSMVNDPNLILS 79
Cdd:COG1377    1 MAEEDDgEKTEEPTPKRLRDAREKGQVARSRELTTALVLLAGLLLLLFLGPSLAERLGELLRSLLSFARALALDPADLLA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537  80 QIIQLIKGAMVALLPLITGVVLVALVSPVMLGGLVFSGKSLQPKFSKLNPLPGIAKMFSAQTGAELLKAILKSVLMGSSA 159
Cdd:COG1377   81 LLGALLLEALLALLPLLLVLALAALLANLLQGGFLFSTKALKPKFSRLNPISGLKRLFSLRALVELLKSLLKLLLVGGVA 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537 160 GFFLWYHWPEMMRLISESPLTAMSNALNLVGLCALLVVLSIIPMVGFDVIFQLYSHFKKLRMSRQDIRDEYKQMEGDPHV 239
Cdd:COG1377  161 YLVLRGELPELLALAALPLAAALALLGDLLLKLLLAVLLALLVIAAIDYPYQRWEHEKKLRMTKQEVKDEHKESEGDPEV 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537 240 KGRIRQMQRAAARRRMMEDVPKADVIVTNPTHYSVALRYDENKMSAPKVVAKGAGLIALRIREIGTENRVPILEAPPLAR 319
Cdd:COG1377  241 KGRIRQLQREMARRRMMAAVPKADVVITNPTHYAVALKYDPGKMGAPVVVAKGADEVALRIREIAREHGVPIVENPPLAR 320

                        330       340       350
                 ....*....|....*....|....*....|..
gi 754492537 320 ALYRHADIGQQIPGQLYAAVAEVLAWVWQLKR 351
Cdd:COG1377  321 ALYATVEVGQEIPEELYQAVAEVLAYVYQLKR 352
flhB TIGR00328
flagellar biosynthetic protein FlhB; FlhB and its functionally equivalent orthologs, from ...
 7-353 1.93e-179

flagellar biosynthetic protein FlhB; FlhB and its functionally equivalent orthologs, from among a larger superfamily of proteins involved in type III protein export systems, are specifically involved in flagellar protein export. The seed members are restricted and the trusted cutoff is set high such that the proteins gathered by this model play roles specifically related to flagellar structures. Full-length homologs scoring below the trusted cutoff are involved in peptide export but not necessarily in the creation of flagella. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 129428  Cd Length: 347  Bit Score: 502.18  E-value: 1.93e-179
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537    7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILIVGVCIIWWGGESLARKLAGMLSTGLRFDHSMVNDPNLILSQIIQLIK 86
Cdd:TIGR00328   1 EKTEEPTPKKLRKAREEGNVPKSREVNSAAVLLAGVLSLLFFGDGLADLLVVLMSFFLSFETSDILNLGSLVGIFFQSIR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537   87 GAMVALLPLITGVVLVALVSPVMLGGLVFSGKSLQPKFSKLNPLPGIAKMFSAQTGAELLKAILKSVLMGSSAGFFLWYH 166
Cdd:TIGR00328  81 EVLLLLLPIFVLLLVVGVLSNIAQFGFLFTTKPLKPKFSKINPIKGLKRLFSLQSLVELLKSLLKVFLVSFVAYFVLRNS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537  167 WPEMMRLISESPLTAMSNALNLVGLCALLVVLSIIPMVGFDVIFQLYSHFKKLRMSRQDIRDEYKQMEGDPHVKGRIRQM 246
Cdd:TIGR00328 161 LGELLSLSLYSLVQAITNFLDIAKSLLILVLLLLLVIAVFDYFFQRWQYIKSLKMTKQEVKDELKQSEGDPEVKGRIRQM 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537  247 QRAAARRRMMEDVPKADVIVTNPTHYSVALRYDENKMSAPKVVAKGAGLIALRIREIGTENRVPILEAPPLARALYRHAD 326
Cdd:TIGR00328 241 QREAARRRMMQEVPKADVVITNPTHYAVALKYDPGKMPAPVVVAKGVDELALKIKEIARENNVPIVENPPLARALYRQVE 320

                         330       340
                  ....*....|....*....|....*..
gi 754492537  327 IGQQIPGQLYAAVAEVLAWVWQLKRWR 353
Cdd:TIGR00328 321 IGQEIPPELYKAVAEVLAYVYKLKKKR 347
Bac_export_2 pfam01312
FlhB HrpN YscU SpaS Family; This family includes the following members: FlhB, HrpN, YscU, SpaS, ...
 7-346 6.71e-172

FlhB HrpN YscU SpaS Family; This family includes the following members: FlhB, HrpN, YscU, SpaS, HrcU SsaU and YopU. All of these proteins export peptides using the type III secretion system. The peptides exported are quite diverse.


Pssm-ID: 460157  Cd Length: 338  Bit Score: 482.71  E-value: 6.71e-172
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537    7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILIVGVCIIWWGGESLARKLAGMLSTGLRFDHsmVNDPNLILSQIIQLIK 86
Cdd:pfam01312   1 EKTEEPTPKKLRDAREKGQVAKSRELTSAAVLLAGLLALLFLGPFLLERLAELFRSVLSFDR--AADPAALLALLLALLL 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537   87 GAMVALLPLITGVVLVALVSPVMLGGLVFSGKSLQPKFSKLNPLPGIAKMFSAQTGAELLKAILKSVLMGSSAGFFLWYH 166
Cdd:pfam01312  79 ELLLLLLPLLLVLLLAALLANLLQVGFLFSTKALKPKFSKLNPISGLKRIFSLRSLVELLKSLLKVAVVGAVAYLVLRGN 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537  167 WPEMMRLISESPLTAMSNALNLVGLCALLVVLSIIPMVGFDVIFQLYSHFKKLRMSRQDIRDEYKQMEGDPHVKGRIRQM 246
Cdd:pfam01312 159 LPELLALADLPLEAALALLGDLLLKLLLAVLLALLVIAAIDYPYQRWQFEKKLKMTKQEVKDEYKESEGDPEIKGRIRQL 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537  247 QRAAARRRMMEDVPKADVIVTNPTHYSVALRYDENKMSAPKVVAKGAGLIALRIREIGTENRVPILEAPPLARALYRHAD 326
Cdd:pfam01312 239 QREMARRRMMAEVPKADVVITNPTHYAVALKYDPGKMPAPVVVAKGADELALRIREIAREHGVPIVENPPLARALYATVE 318

                         330       340
                  ....*....|....*....|
gi 754492537  327 IGQQIPGQLYAAVAEVLAWV 346
Cdd:pfam01312 319 VGQEIPEELYQAVAEVLAYV 338
PRK12772 PRK12772
fused FliR family export protein/FlhB family type III secretion system protein;
6-351 2.62e-95

fused FliR family export protein/FlhB family type III secretion system protein;


Pssm-ID: 237199 [Multi-domain]  Cd Length: 609  Bit Score: 296.59  E-value: 2.62e-95
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537   6 DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILIVGVCIIWWGGESLARKLAGMLSTGLRFDHSM-VNDPNLILSQIIQL 84
Cdd:PRK12772 263 DDKTEEATPKKKSDARKKGQIAKSKELALAITLLACTLVLSALGGYVANTLKETMIYFLNNYLNMnLNYNSLNSLAIITL 342

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537  85 IKGAMVaLLPLITGVVLVALVSPVMLGGLVFSGKSLQPKFSKLNPLPGIAKMFSAQTGAELLKAILKSVLMGSSAGFFLW 164
Cdd:PRK12772 343 LRVAKI-FLPVALPIMVFGVAANLLQTGFLFTKEPLKPDLKKLNPINGFKRMFSMRSVMELLKDLTIITIVGIVGYKFLQ 421

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537 165 YHWPEMMRLISESPLTAMSNALNLVGLCALLVVLSIIPMVGFDVIFQLYSHFKKLRMSRQDIRDEYKQMEGDPHVKGRIR 244
Cdd:PRK12772 422 DNYLDILNLGNLYLPYIITELKSLVISIFFRITLIMIIIAVADYVYQKYQYNKDLRMTKQEVKEEYKQDEGDPQIKAKIK 501

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537 245 QMQRAAARRRMMEDVPKADVIVTNPTHYSVALRYDENKMSAPKVVAKGAGLIALRIREIGTENRVPILEAPPLARALYRH 324
Cdd:PRK12772 502 QKQREMAMQRMMQEVPKATVVVTNPTHIAVALKYEEGKDEAPKVVAKGADYVALKIKEIAKENDVPIIENKPLARLIYKK 581

                        330       340
                 ....*....|....*....|....*..
gi 754492537 325 ADIGQQIPGQLYAAVAEVLAWVWQLKR 351
Cdd:PRK12772 582 VEIDQEIPQDMYQAVAEILAIVYKLKK 608
EscU COG4792
Type III secretory pathway, EscU/YscU component [Intracellular trafficking, secretion, and ...
 1-349 5.91e-89

Type III secretory pathway, EscU/YscU component [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 443821  Cd Length: 344  Bit Score: 271.77  E-value: 5.91e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537   1 MAEEnddKTEAPTPHRLEKAREEGQIPRSRELTSLLILIVGVCIIWWGGESLARKLAGMLSTGLRFdhsmVNDP-----N 75
Cdd:COG4792    1 MSSE---KTEQPTPKKLRDARKKGQVAKSKDIVSAVQLLALLGYLLLEGDALVEHLQALILLPAQL----LNLPfdealN 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537  76 LILSQIIQLikgAMVALLPLITGVVLVALVSPVMLGGLVFSGKSLQPKFSKLNPLPGIAKMFSAQTGAELLKAILKSVLM 155
Cdd:COG4792   74 QLLGALLEL---LLRLVLPLLAVLILATILSNVAQVGFLFATEAIKPKLEKINPVENLKRIFSLRSLVELLKSLLKVVLL 150

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537 156 GSSAGFFLWYHWPEMMRLisesPLTAMSNALNLVGlcALLVVLSIIPMVGF------DVIFQLYSHFKKLRMSRQDIRDE 229
Cdd:COG4792  151 GLIFYYLLRGYLPTLVYL----PYCGLACAGPVVG--ALLKWLWGVLLGAYlvfglaDYLFQRYQFRKQLRMSKDEVKRE 224

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537 230 YKQMEGDPHVKGRIRQMQRAAARRRMMEDVPKADVIVTNPTHYSVALRYDENKMSAPKVVAKGAGLIALRIREIGTENRV 309
Cdd:COG4792  225 YKDMEGDPEIKQKRRRLHREIQSGSLALNVKRSSVVVRNPTHIAVGLRYVPGETPLPVVLEKGEDARAQQIVKLAEEEGV 304

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|
gi 754492537 310 PILEAPPLARALYRHADIGQQIPGQLYAAVAEVLAWVWQL 349
Cdd:COG4792  305 PVVENIPLARALYADAGLGEYIPEDLFEPVAEVLRLALLL 344
FlhB_rel_III TIGR01404
type III secretion protein, YscU/HrpY family; This model represents one of several families of ...
 6-349 1.11e-88

type III secretion protein, YscU/HrpY family; This model represents one of several families of proteins related to bacterial flagellar biosynthesis proteins and involved in bacterial type III protein secretion systems. This family is homologous to, but distinguished from, flagellar biosynthetic protein FlhB (TIGRFAMs model TIGR00328). This model may not identify all type III secretion system FlhB homologs. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]


Pssm-ID: 130471  Cd Length: 342  Bit Score: 271.07  E-value: 1.11e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537    6 DDKTEAPTPHRLEKAREEGQIPRSRELTSLLILIVGVCIIWWGGESLARKLAGMLSTGLRFDHSMvndPNLILSQI-IQL 84
Cdd:TIGR01404   1 AEKTEKPTPKKLRDARKKGQVAKSKDLTSAVLLLAGFFYLLSLASVFEEMLIALLILPLDFDDQP---FAYALAQVlSGL 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537   85 IKGAMVALLPLITGVVLVALVSPVMLGGLVFSGKSLQPKFSKLNPLPGIAKMFSAQTGAELLKAILKSVLMGSSAGFFLW 164
Cdd:TIGR01404  78 LQLILTVLLPLLAIVLLAGVLSGLLQVGFVLATEALKPDLSKLNPISGLKQIFSLRSLKELLKSILKLVALALIFYLFLK 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537  165 YHWPEMMRLISESPLTAmsnalnLVGLCALLVVLSIIPMVGF------DVIFQLYSHFKKLRMSRQDIRDEYKQMEGDPH 238
Cdd:TIGR01404 158 NYLKELFALPYCGLDGL------APIVGELLKLLILVCLGFFlvvglaDFAFQRYLFMKDLKMSKDEVKREYKEQEGDPE 231

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537  239 VKGRIRQMQRAAARRRMMEDVPKADVIVTNPTHYSVALRYDENKMSAPKVVAKGAGLIALRIREIGTENRVPILEAPPLA 318
Cdd:TIGR01404 232 IKSKRRELHQEILSEQLKSDVKRSTLVVANPTHIAIGIYYKPGETPLPLIICKGTDAQALAVRAYAEEAGIPVVRDIPLA 311

                         330       340       350
                  ....*....|....*....|....*....|.
gi 754492537  319 RALYRHADIGQQIPGQLYAAVAEVLAWVWQL 349
Cdd:TIGR01404 312 RQLYRTARVGQYIPEELFEAVAELLRWLEQV 342
flhB PRK13109
flagellar biosynthesis protein FlhB; Reviewed
 1-343 2.54e-67

flagellar biosynthesis protein FlhB; Reviewed


Pssm-ID: 183864  Cd Length: 358  Bit Score: 216.98  E-value: 2.54e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537   1 MAEEND--DKTEAPTPHRLEKAREEGQIPRSRE---LTSLL-ILIVGVCIIWWGGESLARKLAGMLSTGLRFDHSMVNDP 74
Cdd:PRK13109   1 MSDDTDkeSKTEEATERKVRDAIEKGDIPVSREapvFASMLgLLIALAFFARGQAAQLTGDLAPLLDDPRGFSLETGADA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537  75 NLILSQIIQLikgAMVALLPLITGVVLVALVSPVMLGGLVFSGKSLQPKFSKLNPLPGIAKMFSAQTGAELLKAILKSVL 154
Cdd:PRK13109  81 MLLLSRVALA---AGRFLLPILLILAVCGLAASLLQNLPRFVLDRIQPKWSRISPMKGWTRIFGTSGQVEFLKSLFKFLS 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537 155 MGSSAGFFLWYHWPEMMRLISESPLTAMSNALNLVGLCALLVVLSIIPMVGFDVIFQLYSHFKKLRMSRQDIRDEYKQME 234
Cdd:PRK13109 158 VSVVVLLLLRSERAKAVNAMFVDPSQLPELILTVAIRLVSAVAIATIVLVALDLVWARFHWRRSLRMTKQEIKDEHKQAE 237

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537 235 GDPHVKGRIRQMQRAAARRRMMEDVPKADVIVTNPTHYSVALRYDENKMSAPKVVAKGAGLIALRIREIGTENRVPILEA 314
Cdd:PRK13109 238 GDPSVKARLRSLAQDRARNRMLANVPRATLVIANPTHFAIALRYERSENPAPLVVAKGQDLIALKIREIAEENGIPVIED 317

                        330       340
                 ....*....|....*....|....*....
gi 754492537 315 PPLARALYRHADIGQQIPGQLYAAVAEVL 343
Cdd:PRK13109 318 KPLARSLYDAVQVDQVIPAEFYRPVAQIL 346
PRK12721 PRK12721
EscU/YscU/HrcU family type III secretion system export apparatus switch protein;
1-343 2.33e-64

EscU/YscU/HrcU family type III secretion system export apparatus switch protein;


Pssm-ID: 183700  Cd Length: 349  Bit Score: 208.76  E-value: 2.33e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537   1 MAEenddKTEAPTPHRLEKAREEGQIPRSRELTSLLILIVgvCIIWWG--GESLARKLAGMLSTGLrfdhSMVNDPNLI- 77
Cdd:PRK12721   1 MSE----KTEKPTEKKLRDARKKGQVVKSVEITSGVQLAA--LLLYFLleGPSLVEAIIGLINSTI----QLLNKPFLYa 70

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537  78 LSQIIQLIKGAMVALLPLITGVVLVALVSPVMLG-GLVFSGKSLQPKFSKLNPLPGIAKMFSAQTGAELLKAILKSVLMG 156
Cdd:PRK12721  71 LTQILGAVLEVLLRFLLVLGAGLIVATVGTGIAQvGPLLASKAIGPKAEKINPVSNAKQIFSLKSVFELCKSLLKVVILS 150

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537 157 SSAGFFLWYHWPEMMRLisesPLTAMSNALNLV---------GLCALLVVLSIipmvgFDVIFQLYSHFKKLRMSRQDIR 227
Cdd:PRK12721 151 LIFAYLLHYYAPSFAYL----PYCGAACGLPVVstlifwlwgGLLACYLVFGI-----LDYSFQRYKIMKQLKMSKDDVK 221

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537 228 DEYKQMEGDPHVKGRIRQMQRAAARRRMMEDVPKADVIVTNPTHYSVALRYDENKMSAPKVVAKGAGLIALRIREIGTEN 307
Cdd:PRK12721 222 QEYKDSEGDPEIKQKRRELQSEIQSGSLANNVKKSTAVVRNPTHIAVCLYYHPGETPLPRVLEKGKDAQALHIVKLAERN 301

                        330       340       350
                 ....*....|....*....|....*....|....*.
gi 754492537 308 RVPILEAPPLARALYRHADIGQQIPGQLYAAVAEVL 343
Cdd:PRK12721 302 GIPVVENIPLARALFKEVECGDYIPETLFEPVAALL 337
PRK06298 PRK06298
type III secretion system protein; Validated
 7-350 9.62e-50

type III secretion system protein; Validated


Pssm-ID: 180519  Cd Length: 356  Bit Score: 171.19  E-value: 9.62e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537   7 DKTEAPTPHRLEKAREEGQIPRSRELTSLLILIVGVCIIWWGGESLARKLAGMLSTGLRfDHSMVNDPNLILSQIIQLIK 86
Cdd:PRK06298   3 EKTEKATPKRLRDARKKGQVAKSQDFPSAITFIVSMFLTFSLSSFFAKHLGSFLVSIFK-TAPTNHDPVVTVYYLKNCLI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537  87 GAMVALLPLITGVVLVALVSPVMLGGLVFSGKSLQPKFSKLNPLPGIAKMFSAQTGAELLKAILKSvlmgSSAGFFLWYH 166
Cdd:PRK06298  82 LILTASLPLLGAVAFVGVLVGFLIVGPTFSTEVFKPDIKKFNPIDNLKQKFKVKTLIELLKSILKI----SGAALILYIV 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537 167 WPEMMRLISESPLTAMSNALNLVGLCALLVVLSI----IPMVGFDVIFQLYSHFKKLRMSRQDIRDEYKQMEGDPHVKGR 242
Cdd:PRK06298 158 LKNRVPLIIETAGVPPLVTAQIFKEILYKAVTSIgiffLVVAVLDLVYQRHNFAKELKMEKFEVKQEFKDTEGNPEIKGR 237

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537 243 IRQMQRAAARRRMMEDVPKADVIVTNPTHYSVALRYDENKMSAPKVVAKGAGLIALRIREIGTENRVPILEAPPLARALY 322
Cdd:PRK06298 238 RRQIAQEIAYEDTSSQVKHASAVVSNPKDIAVAIGYMPEKYKAPWIIAMGINLRAKRIIAEAEKYGVPIMRNVPLAHQLL 317

                        330       340
                 ....*....|....*....|....*...
gi 754492537 323 RHADIGQQIPGQLYAAVAEVLAWVWQLK 350
Cdd:PRK06298 318 DEGKELKFIPESTYEAIGEILLYITSLN 345
flhB PRK12773
flagellar biosynthesis protein FlhB; Reviewed
 2-351 1.95e-40

flagellar biosynthesis protein FlhB; Reviewed


Pssm-ID: 183737  Cd Length: 646  Bit Score: 151.37  E-value: 1.95e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537   2 AEENDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILIVGVCIIWWGGESLARKLAGML-----STGLRFDHSMvndpnl 76
Cdd:PRK12773 294 AAEDEGRTEPGSERRRREEREKGNVPKSPELPAAVVLLAGVILVYLMGEYFFMRTYYILrkyihGVGLRTDMSS------ 367

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537  77 ilSQIIQLIKGAMVALLPLI---TGVVLV-ALVSPVMLGGLVFSGKSLQPKFSKLNP-----LPGIAKMFSAQTGAELLK 147
Cdd:PRK12773 368 --ESVTELLKNASTDLFTLLwplLGITLVgAIIGNVAQVGFIFTPRALSFNFSRIRPnfkkvLPTRQTLFNLGKSLAKVG 445

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537 148 AILKSVLMGSSAGFFLWYHWPEMMrlISESPLTAMSNALNL---VGLcaLLVVLSIIpmvgfDVIFQLYSHFKKLRMSRQ 224
Cdd:PRK12773 446 LIAWVSYIIISKDFFPILLSGEMG--LEQAVALVMNSSFKIfliVGI--ILLAISIV-----DYLYQRYEYEESLKMTPS 516

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537 225 DIRDEYKQMEGDPHVKGRIRQMQR-AAARRRMMEDVPKADVIVTNPTHYSVALRYDENKMSAPKVVAKGAGLIALRIREI 303
Cdd:PRK12773 517 EAKREAKESDGDRSLQARRRQLARdMMNKRKMLAKVPEADVVITNPTHFAVALEYKPGIHKAPIVIAKGVDDFALLIIRI 596

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*...
gi 754492537 304 GTENRVPILEAPPLARALYRHADIGQQIPGQLYAAVAEVLAWVWQLKR 351
Cdd:PRK12773 597 ARENGVPTVEDRLQARGLYEEVELGAEVPQQFYRAIATILSRLESFRR 644
PRK08156 PRK08156
EscU/YscU/HrcU family type III secretion system export apparatus switch protein;
1-373 2.23e-35

EscU/YscU/HrcU family type III secretion system export apparatus switch protein;


Pssm-ID: 236168  Cd Length: 361  Bit Score: 132.83  E-value: 2.23e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537   1 MAEenddKTEAPTPHRLEKAREEGQIPRSRELTSLLILIVGVCIIWWGG--ESLARKLAGMLSTGLRFDhsmvndpnlIL 78
Cdd:PRK08156   1 MAN----KTEKPTKKKLRDSAKKGQSFKSKDLITAVVLLGGIAYLVSFGsfSEFMSIYKRILADNFDIN---------IG 67

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537  79 SQIIQLIKGAMVALLPLITGVVLVALVSPVMLGGLVFSGKSLQPKFSKLNPLPGIAKMFSAQTGAELLKAILKSVLMGSS 158
Cdd:PRK08156  68 DYFLAVMIIFLKILIPFLLLCLLAGALPTLLQTRFVLATEAIKLNFSALNPVKGLKKIFSLRTVKEFVKALLYLIVFALT 147

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537 159 AGFFLWYHWPEMMRLISESPLTAMSNALNLVGLCALLVVLSIIPMVGFDVIFQLYSHFKKLRMSRQDIRDEYKQMEGDPH 238
Cdd:PRK08156 148 AYVFWKNYKKEIFSQLNGNIVGLIVIWRELLVKLVLTFLACALIVLILDFIAEYFLHMKDMKMDKQEVKREYKEQEGNPE 227

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754492537 239 VKGRIRQMQRAAARRRMMEDVPKADVIVTNPTHYSVALRYDENKMSAPKVVAKGAGLIALRIREIGTENRVPILEAPPLA 318
Cdd:PRK08156 228 IKSKRREAHQEILSEQVKSDIRNSRLIVANPTHIAIGIYFNPELAPIPFISVRETNQRALAVRAYAEKVGVPVVRDIKLA 307

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 754492537 319 RALYRHADIGQQIPGQLYAAVAEVLAWvwqLKRWRLAGGQRPVKPENLPVPAALD 373
Cdd:PRK08156 308 RRLYKTHRRYSFVSLEDLDEVLRLLIW---LEQVENAGMGVPQPQENEVRSAEPG 359
YlqH COG2257
Type III secretion system substrate exporter, FlhB-like [Intracellular trafficking, secretion, ...
 274-351 3.45e-27

Type III secretion system substrate exporter, FlhB-like [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 441858 [Multi-domain]  Cd Length: 95  Bit Score: 103.34  E-value: 3.45e-27
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 754492537 274 VALRYDENKMSAPKVVAKGAGLIALRIREIGTENRVPILEAPPLARALYRHaDIGQQIPGQLYAAVAEVLAWVWQLKR 351
Cdd:COG2257   12 VALKYDGEKDNAPKVVAKGKGELAEKIIELAKEHGVPVHEDPELVELLSQL-DLGDEIPPELYQAVAEILAFIYRLDG 88
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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