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Conserved domains on  [gi|754699347|ref|WP_042075804|]
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MULTISPECIES: flagellin B [Aeromonas]

Protein Classification

flagellin( domain architecture ID 1001289)

flagellin polymerizes to form the filaments of bacterial flagella

CATH:  3.30.70.2120|1.20.1330.10
Gene Ontology:  GO:0009288|GO:0005576
PubMed:  34299141
SCOP:  4007637

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
PRK08869 super family cl35743
polar flagellin E;
2-301 4.76e-108

polar flagellin E;


The actual alignment was detected with superfamily member PRK08869:

Pssm-ID: 236344 [Multi-domain]  Cd Length: 376  Bit Score: 318.80  E-value: 4.76e-108
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   2 AMYINTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEGA 81
Cdd:PRK08869   1 AVNVNTNVSAMTAQRNLNGATSALSQSMERLSSGKRINSAKDDAAGLQISNRLTTQIRGLDVAVRNANDGISIAQTAEGA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347  82 MDEITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRISSDTTFGGQKLLDGSYKG-SFQVGADAGQTITFKM 160
Cdd:PRK08869  81 MNETTNILQRMRDLSLQSANGSNSASDRQALQEEVTALNDELNRIAETTSFGGTKLLNGSFGTkSFQIGANSGEAVSLDL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 161 TS------------------------------AFTIS-----------------------------------GIASATKG 175
Cdd:PRK08869 161 KSmrsdakimggvsydaeggadkdwtvgagntDLNVSfddkggetqaitinakagddieelatyingqtdgvGASVSEDG 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 176 SATVATGTGKEPYSVTNGSGPVDVANMNS----------ITTASAAQSAMANLDFMIKAVDSKRAELGAVQNRFDSTIRN 245
Cdd:PRK08869 241 KLQLFAAGQKVSGGVSFSGGLAAELGLGNatavtvddldISTVGGAQQAVAVIDAALKYVDSHRADLGAFQNRFTHAINN 320

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 754699347 246 QSNVSENLSAARSRIRDADFATETANMTKQNILQQAASSILAQANQRPQSALSLLG 301
Cdd:PRK08869 321 LQNISENLSASNSRIKDTDFAKETTELTKAQILQQAGTSILAQAKQAPQSALSLLQ 376
 
Name Accession Description Interval E-value
PRK08869 PRK08869
polar flagellin E;
2-301 4.76e-108

polar flagellin E;


Pssm-ID: 236344 [Multi-domain]  Cd Length: 376  Bit Score: 318.80  E-value: 4.76e-108
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   2 AMYINTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEGA 81
Cdd:PRK08869   1 AVNVNTNVSAMTAQRNLNGATSALSQSMERLSSGKRINSAKDDAAGLQISNRLTTQIRGLDVAVRNANDGISIAQTAEGA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347  82 MDEITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRISSDTTFGGQKLLDGSYKG-SFQVGADAGQTITFKM 160
Cdd:PRK08869  81 MNETTNILQRMRDLSLQSANGSNSASDRQALQEEVTALNDELNRIAETTSFGGTKLLNGSFGTkSFQIGANSGEAVSLDL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 161 TS------------------------------AFTIS-----------------------------------GIASATKG 175
Cdd:PRK08869 161 KSmrsdakimggvsydaeggadkdwtvgagntDLNVSfddkggetqaitinakagddieelatyingqtdgvGASVSEDG 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 176 SATVATGTGKEPYSVTNGSGPVDVANMNS----------ITTASAAQSAMANLDFMIKAVDSKRAELGAVQNRFDSTIRN 245
Cdd:PRK08869 241 KLQLFAAGQKVSGGVSFSGGLAAELGLGNatavtvddldISTVGGAQQAVAVIDAALKYVDSHRADLGAFQNRFTHAINN 320

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 754699347 246 QSNVSENLSAARSRIRDADFATETANMTKQNILQQAASSILAQANQRPQSALSLLG 301
Cdd:PRK08869 321 LQNISENLSASNSRIKDTDFAKETTELTKAQILQQAGTSILAQAKQAPQSALSLLQ 376
lat_flg_LafA_2 NF038071
lateral flagellin LafA;
1-300 9.20e-67

lateral flagellin LafA;


Pssm-ID: 468331 [Multi-domain]  Cd Length: 283  Bit Score: 210.08  E-value: 9.20e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   1 MAMYINTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEG 80
Cdd:NF038071   1 MGLSIHTNYASLVTQNQLNSTNKMLGTAMQRLGTGLRINSAADDAAGLQMATRLQAQSNGQKVGMRNAQDAISMMQTAEG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347  81 AMDEITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRISSDTTFGGQKLLDGSYKG----SFQVGADAGQTI 156
Cdd:NF038071  81 AMDEMTNITQRMKDLATQSANGTASAADRAAMDAEFKELSAELDNIMDNTTFGGQKLLKDGGKFeaavTFQIGGSSAEKL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 157 TFKmtsaftisgiasATKGSATVATGTGKEPYSVTNGSGpvdvanmnsiTTASAAQSAMANLDFMIKAVDSKRAELGAVQ 236
Cdd:NF038071 161 DVD------------ASANVQKVNAEVVGTEKDVTAGIG----------TQAKAASAAITKLDTLLGDIGAVRSQFGANI 218

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 754699347 237 NRFDSTIRNQSNVSENLSAARSRIRDADFATETANMTKQNILQQAASSILAQANQRPQSALSLL 300
Cdd:NF038071 219 NRLEHTVNNLSNMKENTDMAKGRIMDADFAAESTNMTKNQMLMQAGMSVLSNSNQMTGMVTSLL 282
FlgL COG1344
Flagellin and related hook-associated protein FlgL [Cell motility];
3-301 1.33e-61

Flagellin and related hook-associated protein FlgL [Cell motility];


Pssm-ID: 440955 [Multi-domain]  Cd Length: 245  Bit Score: 195.47  E-value: 1.33e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   3 MYINTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEGAM 82
Cdd:COG1344    1 MRISTNMSALNALRNLNRTQSDLAKLQEQLSSGKRINSASDDPAGAAIALRLRSQIRGLEQYQRNANDAISRLQTAEGAL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347  83 DEITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRISSDTTFGGQKLLDGsykgsfqvgadagqtitfkmts 162
Cdd:COG1344   81 GEITDILQRARELAVQAANGTLSDEDRAAIAAELEQLLDQLLSIANTTDFNGRYLFAG---------------------- 138

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 163 aftisgiasatkgsatvaTGTGKEPYSVTNGSGpvdvanmnsittASAAQSAMANLDFMIKAVDSKRAELGAVQNRFDST 242
Cdd:COG1344  139 ------------------TATDTPPFQVDYQGD------------AGQRTAALGALDAALDNVSSARAELGARQNRLESA 188

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 754699347 243 IRNQSNVSENLSAARSRIRDADFATETANMTKQNILQQAASSILAQANQrpQSALSLLG 301
Cdd:COG1344  189 INNLSDLSENLTAALSRLEDADMAEAITRLTKLQTLLQAALAALAQANQ--LSLLDLLR 245
Flagellin_N pfam00669
Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial ...
 5-142 2.05e-34

Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial flagella. This family includes flagellins and hook associated protein 3. Structurally this family forms an extended helix that interacts with pfam00700.


Pssm-ID: 425809 [Multi-domain]  Cd Length: 139  Bit Score: 122.07  E-value: 2.05e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347    5 INTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEGAMDE 84
Cdd:pfam00669   1 INTNSAALAARSNLNKNQAELSKAQERLSTGLRINSALDDAAGLAISVSLRAQIAGLSQAVRNNSLGIGRLQTAQGALSE 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 754699347   85 ITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRISSDTTFGGQKLLDGSY 142
Cdd:pfam00669  81 VTDILQRMKELAVQASNGGNSDIDRASIQAEIQQLTDELNNIANTTSFNGEYLLAGIN 138
flagell_flgL TIGR02550
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated ...
 5-291 1.49e-21

flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated proteins designated FlgL (or HAP3) encoded in bacterial flagellar operons. A N-terminal region of about 150 residues and a C-terminal region of about 85 residues are conserved. Members show considerable length heterogeneity between these two well-conserved terminal regions; the seed alignment 486 columns, 393 of which are represented in the model, while members of this family are from 287 to over 500 residues in length. This model distinguishes FlgL from the flagellin gene product FliC. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274195 [Multi-domain]  Cd Length: 306  Bit Score: 92.41  E-value: 1.49e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347    5 INTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEGAMDE 84
Cdd:TIGR02550   2 VSTNMLYNNSLNSITNNQSRLAKLQQQLSSGKRINKPSDDPVAAAQALNLNQELAQLEQYQKNIDDAKNWLSQTETALSS 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   85 ITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRISSDTTFGGQKLLDGSYKGSFQVGADAGQTITFKMTSAF 164
Cdd:TIGR02550  82 VGDVLQRARELAVQAANGTLSDDDRKAIAKEIKQLLDQLVNLANTKDGNGRYIFSGTKTDTPPFSEDEGGEVTYNGDGGQ 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347  165 TISGIASATKGSATVatgTGKEPYSVTNGSGPVDVANMNSITTA--------------SAAQSAMANLDFMIKAVDSKRA 230
Cdd:TIGR02550 162 RKVQVASNRSMPIGH---PGDKVFMSIPNNDKSVFSTGDDLIDAlkkledalssgdakAALSASLNDLDKALDNVLSARA 238

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 754699347  231 ELGAVQNRFDSTIRNQSNVSENLSAARSRIRDADFATETANMTKQNILQQAASSILAQANQ 291
Cdd:TIGR02550 239 EVGARLNRLENLNSRLSEQKLQLTEQLSDLEDVDLAEAISDLNMQQAALQAALKTFAKIQQ 299
 
Name Accession Description Interval E-value
PRK08869 PRK08869
polar flagellin E;
2-301 4.76e-108

polar flagellin E;


Pssm-ID: 236344 [Multi-domain]  Cd Length: 376  Bit Score: 318.80  E-value: 4.76e-108
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   2 AMYINTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEGA 81
Cdd:PRK08869   1 AVNVNTNVSAMTAQRNLNGATSALSQSMERLSSGKRINSAKDDAAGLQISNRLTTQIRGLDVAVRNANDGISIAQTAEGA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347  82 MDEITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRISSDTTFGGQKLLDGSYKG-SFQVGADAGQTITFKM 160
Cdd:PRK08869  81 MNETTNILQRMRDLSLQSANGSNSASDRQALQEEVTALNDELNRIAETTSFGGTKLLNGSFGTkSFQIGANSGEAVSLDL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 161 TS------------------------------AFTIS-----------------------------------GIASATKG 175
Cdd:PRK08869 161 KSmrsdakimggvsydaeggadkdwtvgagntDLNVSfddkggetqaitinakagddieelatyingqtdgvGASVSEDG 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 176 SATVATGTGKEPYSVTNGSGPVDVANMNS----------ITTASAAQSAMANLDFMIKAVDSKRAELGAVQNRFDSTIRN 245
Cdd:PRK08869 241 KLQLFAAGQKVSGGVSFSGGLAAELGLGNatavtvddldISTVGGAQQAVAVIDAALKYVDSHRADLGAFQNRFTHAINN 320

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 754699347 246 QSNVSENLSAARSRIRDADFATETANMTKQNILQQAASSILAQANQRPQSALSLLG 301
Cdd:PRK08869 321 LQNISENLSASNSRIKDTDFAKETTELTKAQILQQAGTSILAQAKQAPQSALSLLQ 376
PRK06819 PRK06819
FliC/FljB family flagellin;
1-300 2.68e-84

FliC/FljB family flagellin;


Pssm-ID: 235867 [Multi-domain]  Cd Length: 376  Bit Score: 258.17  E-value: 2.68e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   1 MAMYINTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEG 80
Cdd:PRK06819   1 MAAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISIAQTTEG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347  81 AMDEITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRISSDTTFGGQKLLDGSYKGSFQVGADAGQTIT--- 157
Cdd:PRK06819  81 ALNEINNNLQRVRELTVQAQNGSNSSSDLDSIQDEISQRLAEIDRVSDQTQFNGVKVLAEDTTMSIQVGANDGETIDinl 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 158 --------------------------------------FKMTSAFTISGIASATKGSATVATGTGKEPYSVTNGSGPV-- 197
Cdd:PRK06819 161 qkidskslglgsfsvsgvsgaltsltftdtaldtsvtgVTTTTALDFSDISTFAKGATVHGIGDVGTDGAYADGYVIRtt 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 198 -------------------DVANMNSITTA-------------SAAQSAMANLDFMIKAVDSKRAELGAVQNRFDSTIRN 245
Cdd:PRK06819 241 dgkqykgevdatngkvtfaDDANGDPITDAtkleaaaqfspagKATASPLETLDDALKQVDGLRSSLGAVQNRFESTVTN 320

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 754699347 246 QSNVSENLSAARSRIRDADFATETANMTKQNILQQAASSILAQANQRPQSALSLL 300
Cdd:PRK06819 321 LNNTVTNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQANQVPQTVLSLL 375
PRK12802 PRK12802
flagellin; Provisional
 1-301 1.06e-77

flagellin; Provisional


Pssm-ID: 139237 [Multi-domain]  Cd Length: 282  Bit Score: 238.24  E-value: 1.06e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   1 MAMYINTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEG 80
Cdd:PRK12802   1 MALTVNTNITSLTVQKNLSRASDALSTSMTRLSSGLKINSAKDDAAGLQIATRQTSQIRGQTQAIKNANDGISIAQTAEG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347  81 AMDEITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRISSDTTFGGQKLLDGSYKG-SFQVGADAGQ--TIT 157
Cdd:PRK12802  81 ALQESTNILQRMRELAVQSRNDSNDSTDRAALNKEFTTMLDEITRIATSTTLNGKNLLDGSAGTmTFQVGANTGQsnQIT 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 158 FKMTSAFTISGIASatkGSATVATGTgkepysvtngsgpvdvanmNSITTASAAQSAMANLDFMIKAVDSKRAELGAVQN 237
Cdd:PRK12802 161 FGLSASFDATGLGV---GSGTLITGA-------------------DSAAAETNAQAAITAIDAALQTINTTRADLGAAQN 218

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 754699347 238 RFDSTIRNQSNVSENLSAARSRIRDADFATETANMTKQNILQQAASSILAQANQRPQSALSLLG 301
Cdd:PRK12802 219 RLQSTISNLQNINENASAARGRVQDTDFAAETAQLTKQQTLQQASTSVLAQANQLPSAVLKLLQ 282
lat_flg_LafA_2 NF038071
lateral flagellin LafA;
1-300 9.20e-67

lateral flagellin LafA;


Pssm-ID: 468331 [Multi-domain]  Cd Length: 283  Bit Score: 210.08  E-value: 9.20e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   1 MAMYINTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEG 80
Cdd:NF038071   1 MGLSIHTNYASLVTQNQLNSTNKMLGTAMQRLGTGLRINSAADDAAGLQMATRLQAQSNGQKVGMRNAQDAISMMQTAEG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347  81 AMDEITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRISSDTTFGGQKLLDGSYKG----SFQVGADAGQTI 156
Cdd:NF038071  81 AMDEMTNITQRMKDLATQSANGTASAADRAAMDAEFKELSAELDNIMDNTTFGGQKLLKDGGKFeaavTFQIGGSSAEKL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 157 TFKmtsaftisgiasATKGSATVATGTGKEPYSVTNGSGpvdvanmnsiTTASAAQSAMANLDFMIKAVDSKRAELGAVQ 236
Cdd:NF038071 161 DVD------------ASANVQKVNAEVVGTEKDVTAGIG----------TQAKAASAAITKLDTLLGDIGAVRSQFGANI 218

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 754699347 237 NRFDSTIRNQSNVSENLSAARSRIRDADFATETANMTKQNILQQAASSILAQANQRPQSALSLL 300
Cdd:NF038071 219 NRLEHTVNNLSNMKENTDMAKGRIMDADFAAESTNMTKNQMLMQAGMSVLSNSNQMTGMVTSLL 282
PRK12804 PRK12804
flagellin; Provisional
 3-300 2.11e-63

flagellin; Provisional


Pssm-ID: 183759 [Multi-domain]  Cd Length: 301  Bit Score: 202.15  E-value: 2.11e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   3 MYINTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEGAM 82
Cdd:PRK12804   1 MRINHNIAALNTLNRLSANNGASQKNMEKLSSGLKINRAGDDAAGLAISEKMRGQIRGLEMASKNAQDGISLIQTAEGAL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347  83 DEITSMLQRMRTLAQQSAN-GSNNSDDRNALQQEYDQLTTEIDRISSDTTFGGQKLLDGSYKGS----------FQVGAD 151
Cdd:PRK12804  81 TETHSILQRVRELVVQAGNtGTQDGTDLGAIQDEIKALVDEIDGISDRTEFNGKKLLDGTFKPAapaagtksltFQIGAN 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 152 AGQTITFKMTSAftisgiaSATKGSATVATGTGKEPYSVTNgsgpVDVANMNSITTASAA--QSAMANLDFMIKAVDSKR 229
Cdd:PRK12804 161 AAQQLSVNIEAM-------SADALGVKDTDGTLVTGKSVSD----IDVTKFANAAAAADGgfDDQLKIVDGAIKQVSDQR 229

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 754699347 230 AELGAVQNRFDSTIRNQSNVSENLSAARSRIRDADFATETANMTKQNILQQAASSILAQANQRPQSALSLL 300
Cdd:PRK12804 230 SKLGAVQNRLEHTINNLGASGENLTAAESRIRDVDMAKEMSEFTKNNILSQASQAMLAQANQQPQNVLQLL 300
FlgL COG1344
Flagellin and related hook-associated protein FlgL [Cell motility];
3-301 1.33e-61

Flagellin and related hook-associated protein FlgL [Cell motility];


Pssm-ID: 440955 [Multi-domain]  Cd Length: 245  Bit Score: 195.47  E-value: 1.33e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   3 MYINTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEGAM 82
Cdd:COG1344    1 MRISTNMSALNALRNLNRTQSDLAKLQEQLSSGKRINSASDDPAGAAIALRLRSQIRGLEQYQRNANDAISRLQTAEGAL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347  83 DEITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRISSDTTFGGQKLLDGsykgsfqvgadagqtitfkmts 162
Cdd:COG1344   81 GEITDILQRARELAVQAANGTLSDEDRAAIAAELEQLLDQLLSIANTTDFNGRYLFAG---------------------- 138

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 163 aftisgiasatkgsatvaTGTGKEPYSVTNGSGpvdvanmnsittASAAQSAMANLDFMIKAVDSKRAELGAVQNRFDST 242
Cdd:COG1344  139 ------------------TATDTPPFQVDYQGD------------AGQRTAALGALDAALDNVSSARAELGARQNRLESA 188

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 754699347 243 IRNQSNVSENLSAARSRIRDADFATETANMTKQNILQQAASSILAQANQrpQSALSLLG 301
Cdd:COG1344  189 INNLSDLSENLTAALSRLEDADMAEAITRLTKLQTLLQAALAALAQANQ--LSLLDLLR 245
PRK12806 PRK12806
flagellin; Provisional
 1-301 7.81e-57

flagellin; Provisional


Pssm-ID: 183761 [Multi-domain]  Cd Length: 475  Bit Score: 189.90  E-value: 7.81e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   1 MAMYINTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEG 80
Cdd:PRK12806   1 MAQVINTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQAVRNANDGISLAQVAEG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347  81 AMDEITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRISSDTTFGGQKLLDGSYKG-SFQVGADAGQTITFK 159
Cdd:PRK12806  81 AMQETTNILQRMRELSVQAANSTNNSSDRASIQSEISQLKSELERIAQNTEFNGQRILDGSFSGaSFQVGANSNQTINFS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 160 MTSA---------------------------------------------------------------------------- 163
Cdd:PRK12806 161 IGSIkassiggiatatgtevagaaatditiaigggaatsinssanftgalngqdatsayakaaaindagigglsvtasts 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 164 -----------------FTISG--------IASATKGSA------------------------------------TVATG 182
Cdd:PRK12806 241 gtqavgaiggtagdtynLTINGvaiytnldVATALTNSDlrdaingvsnqtgvvaslnggnmtltaadgrnitvtESGTG 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 183 TGKEPYSVTNGSGPVDVANMNSIT-----------------------------------TASAAQSAMANLDFMIKAVDS 227
Cdd:PRK12806 321 FTAGTDGLTVTGGAFDGALRGTLSisavdtiaiggtvaniglsaniskdtvgidsldvsTASGAQTAIKRIDAALNSVNS 400

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 754699347 228 KRAELGAVQNRFDSTIRNQSNVSENLSAARSRIRDADFATETANMTKQNILQQAASSILAQANQRPQSALSLLG 301
Cdd:PRK12806 401 NRANMGALQNRFESTIANLQNVSDNLSAARSRIQDADYAAEMASLTKNQILQQAGTAMLAQANSLPQSVLSLLG 474
PRK12807 PRK12807
flagellin; Provisional
 3-300 3.31e-47

flagellin; Provisional


Pssm-ID: 171737 [Multi-domain]  Cd Length: 287  Bit Score: 159.99  E-value: 3.31e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   3 MYINTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEGAM 82
Cdd:PRK12807   1 MRINTNINSMRTQEYMRQNQDKMNVSMNRLSSGKRINSAADDAAGLAIATRMRARQSGLEKASQNTQDGMSLIRTAESAM 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347  83 DEITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRISSDTTFGGQKLLDGSYKGSFQVGADAGQTITFKMTS 162
Cdd:PRK12807  81 NSVSNILTRMRDIAVQSSNGTNTAENQSALQKEFAELQEQIDYIAKNTEFNDKNLLAGTGAVTIGSTSISGAEISIETLD 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 163 aftisgiASATKGSATVATGTGKEPYSVTNGSgpvdvANMNSITTASAAQSAMANLDFMIKAVDSKRAELGAVQNRFDST 242
Cdd:PRK12807 161 -------SSATNQQITIKLANTTAEKLGIDAT-----TSNISISGAASALAAISALNTALNTVAGNRATLGATLNRLDRN 228

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 754699347 243 IRNQSNVSENLSAARSRIRDADFATETANMTKQNILQQAASSILAQANQRPQSALSLL 300
Cdd:PRK12807 229 VENLNNQATNMASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLL 286
PRK08026 PRK08026
FliC/FljB family flagellin;
1-219 1.56e-42

FliC/FljB family flagellin;


Pssm-ID: 236140 [Multi-domain]  Cd Length: 529  Bit Score: 152.97  E-value: 1.56e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   1 MAMYINTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEG 80
Cdd:PRK08026   1 MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347  81 AMDEITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRISSDTTFGGQKLL--DGSYKgsFQVGADAGQTITF 158
Cdd:PRK08026  81 ALSEINNNLQRVRELTVQAATGTNSQSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLakDGSMK--IQVGANDGETITI 158

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 159 KMT---------SAFTISGIASATKGSATVATGTGKEpySVTNGSGPVDVANMNSITTASAAQSAMANLD 219
Cdd:PRK08026 159 DLKkidsdtlglDGFNVNGKGTVANTAATVSDLTAAG--ATLDTTGLYDVKTKNAALTTADALAKLGDGD 226
PRK12803 PRK12803
flagellin; Provisional
 3-300 1.14e-37

flagellin; Provisional


Pssm-ID: 183758 [Multi-domain]  Cd Length: 335  Bit Score: 136.48  E-value: 1.14e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   3 MYINTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEGAM 82
Cdd:PRK12803   1 MIINHNTSAINASRNNSINAANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQASRNTSKAINFIQTTEGNL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347  83 DEITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRISSDTTFGGQKLLD----------------------- 139
Cdd:PRK12803  81 NEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSnksaaqnvrtaeelgmqpakint 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 140 --------GSYKGSFQVGADAGQTITFKMTSA-----FTISGIASATKGSATVATGTGKEPYSVTNGSGPVDVANMNSIT 206
Cdd:PRK12803 161 paslsgsqASWTLRVHVGANQDEAIAVNIYAAnvanlFSGEGAQQAAPVQEGAQQEGAQAAPAPAAAPAQGGVNSPVNVT 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 207 TASAAQSAMANLDFMIKAVDSKRAELGAVQNRFDSTIRNQSNVSENLSAARSRIRDADFATETANMTKQNILQQAASSIL 286
Cdd:PRK12803 241 TTVDANMSLAKIENAIRMISDQRANLGAFQNRLESIKASTEYAIENLKASYAQIKDATMTDEVVASTTNSILTQSAMAMI 320

                        330
                 ....*....|....
gi 754699347 287 AQANQRPQSALSLL 300
Cdd:PRK12803 321 AQANQVPQYVLSLL 334
PRK12805 PRK12805
FliC/FljB family flagellin;
3-300 7.92e-35

FliC/FljB family flagellin;


Pssm-ID: 183760 [Multi-domain]  Cd Length: 287  Bit Score: 127.68  E-value: 7.92e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   3 MYINTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEGAM 82
Cdd:PRK12805   1 MKVNTNIISLKTQEYLRKNNEGMTQAQERLASGKRINSSLDDAAGLAVVTRMNVKSTGLDAASKNSSMGIDLLQTADSAL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347  83 DEITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRISSDTTFGGQKLLDGSYKG-----SFQVGADAGQTIT 157
Cdd:PRK12805  81 SSMSSILQRMRQLAVQSSNGSFSDEDRKQYTAEFGSLIKELDHVADTTNYNNIKLLDQTATGaatqvSIQASDKANDLIN 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 158 FKMTSAFTISGiasatkGSATVATGTGKEPYSVTngsgpvdvanmnSITTASAAQSAMANLDFMIKAVDSKRAELGAVQN 237
Cdd:PRK12805 161 IDLFNAKGLSA------GTITLGSGSTVAGYSAL------------SVADADSSQEATEAIDELINNISNGRALLGAGMS 222

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 754699347 238 RFDSTIRNQSNVSENLSAARSRIRDADFATETANMTKQNILQQAASSILAQANQRPQSALSLL 300
Cdd:PRK12805 223 RLSYNVSNVNNQSIATKASASSIEDADMAAEMSEMTKYKILTQTSISMLSQANQTPQMLTQLI 285
Flagellin_N pfam00669
Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial ...
 5-142 2.05e-34

Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial flagella. This family includes flagellins and hook associated protein 3. Structurally this family forms an extended helix that interacts with pfam00700.


Pssm-ID: 425809 [Multi-domain]  Cd Length: 139  Bit Score: 122.07  E-value: 2.05e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347    5 INTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEGAMDE 84
Cdd:pfam00669   1 INTNSAALAARSNLNKNQAELSKAQERLSTGLRINSALDDAAGLAISVSLRAQIAGLSQAVRNNSLGIGRLQTAQGALSE 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 754699347   85 ITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRISSDTTFGGQKLLDGSY 142
Cdd:pfam00669  81 VTDILQRMKELAVQASNGGNSDIDRASIQAEIQQLTDELNNIANTTSFNGEYLLAGIN 138
PRK13588 PRK13588
flagellin B; Provisional
 1-156 9.02e-31

flagellin B; Provisional


Pssm-ID: 237440 [Multi-domain]  Cd Length: 514  Bit Score: 120.74  E-value: 9.02e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   1 MAMYINTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEG 80
Cdd:PRK13588   1 MSFRINTNIAALNAHAVGVQNNRDLSSSLEKLSSGLRINKAADDASGMAIADSLRSQSANLGQAIRNANDAIGMVQTADK 80

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 754699347  81 AMDEITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRISSDTTFGGQKLLDGSYKG-SFQVGADAGQTI 156
Cdd:PRK13588  81 AMDEQIKILDTIKTKAVQAAQDGQTLESRRALQSDIQRLLEELDNIANTTSFNGQQMLSGSFSNkEFQIGAYSNTTV 157
PRK08411 PRK08411
flagellin; Reviewed
 1-157 3.81e-30

flagellin; Reviewed


Pssm-ID: 236260 [Multi-domain]  Cd Length: 572  Bit Score: 119.32  E-value: 3.81e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   1 MAMYINTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEG 80
Cdd:PRK08411   1 MGFRINTNVAALNAKANSDLNAKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQAISNGNDALGILQTADK 80

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 754699347  81 AMDEITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRISSDTTFGGQKLLDGSYKGS-FQVGADAGQTIT 157
Cdd:PRK08411  81 AMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTTSFNGKQLLSGNFTNQeFQIGASSNQTVK 158
PRK12584 PRK12584
flagellin A; Reviewed
 1-156 5.67e-29

flagellin A; Reviewed


Pssm-ID: 237146 [Multi-domain]  Cd Length: 510  Bit Score: 115.39  E-value: 5.67e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   1 MAMYINTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEG 80
Cdd:PRK12584   1 MAFQVNTNINALNAHVQSALTQNALKTSLEKLSSGLRINKAADDASGMTIADSLRSQASSLGQAIANTNDGMGIIQVADK 80

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 754699347  81 AMDEITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRISSDTTFGGQKLLDGSYKG-SFQVGADAGQTI 156
Cdd:PRK12584  81 AMDEQLKILDTIKVKATQAAQDGQTTESRKAIQSDIVRLIQGLDNIGNTTTYNGQALLSGQFTNkEFQVGAYSNQSI 157
PRK13589 PRK13589
flagellin A;
1-156 2.19e-27

flagellin A;


Pssm-ID: 172158 [Multi-domain]  Cd Length: 576  Bit Score: 111.66  E-value: 2.19e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   1 MAMYINTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEG 80
Cdd:PRK13589   1 MGFRINTNIGALNAHANSVVNSRELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQAINNGNDAIGILQTADK 80

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 754699347  81 AMDEITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRISSDTTFGGQKLLDGSYKGS-FQVGADAGQTI 156
Cdd:PRK13589  81 AMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTTSFNGKQLLSGNFTNQeFQIGASSNQTI 157
PRK12808 PRK12808
flagellin; Provisional
 3-194 1.40e-25

flagellin; Provisional


Pssm-ID: 237212 [Multi-domain]  Cd Length: 476  Bit Score: 105.81  E-value: 1.40e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   3 MYINTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEGAM 82
Cdd:PRK12808   1 MRINTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAM 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347  83 DEITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRISSDTTFGGQKLLDGSYKGSFQV--GADAGQTITFKM 160
Cdd:PRK12808  81 NSVSNILLRMRDIANQSANGTNTDKNQAALQKEFAELQKQITYIADNTQFNDKNLLNSNSSINIQTldSSDGDKQIGIDL 160

                        170       180       190
                 ....*....|....*....|....*....|....*
gi 754699347 161 TSAFTIS-GIASATKGSATVATGTGKEPYSVTNGS 194
Cdd:PRK12808 161 KSATLEAlGINDLSIGANTDIEAVSTKIAALDKNT 195
flagell_flgL TIGR02550
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated ...
 5-291 1.49e-21

flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated proteins designated FlgL (or HAP3) encoded in bacterial flagellar operons. A N-terminal region of about 150 residues and a C-terminal region of about 85 residues are conserved. Members show considerable length heterogeneity between these two well-conserved terminal regions; the seed alignment 486 columns, 393 of which are represented in the model, while members of this family are from 287 to over 500 residues in length. This model distinguishes FlgL from the flagellin gene product FliC. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274195 [Multi-domain]  Cd Length: 306  Bit Score: 92.41  E-value: 1.49e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347    5 INTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEGAMDE 84
Cdd:TIGR02550   2 VSTNMLYNNSLNSITNNQSRLAKLQQQLSSGKRINKPSDDPVAAAQALNLNQELAQLEQYQKNIDDAKNWLSQTETALSS 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   85 ITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRISSDTTFGGQKLLDGSYKGSFQVGADAGQTITFKMTSAF 164
Cdd:TIGR02550  82 VGDVLQRARELAVQAANGTLSDDDRKAIAKEIKQLLDQLVNLANTKDGNGRYIFSGTKTDTPPFSEDEGGEVTYNGDGGQ 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347  165 TISGIASATKGSATVatgTGKEPYSVTNGSGPVDVANMNSITTA--------------SAAQSAMANLDFMIKAVDSKRA 230
Cdd:TIGR02550 162 RKVQVASNRSMPIGH---PGDKVFMSIPNNDKSVFSTGDDLIDAlkkledalssgdakAALSASLNDLDKALDNVLSARA 238

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 754699347  231 ELGAVQNRFDSTIRNQSNVSENLSAARSRIRDADFATETANMTKQNILQQAASSILAQANQ 291
Cdd:TIGR02550 239 EVGARLNRLENLNSRLSEQKLQLTEQLSDLEDVDLAEAISDLNMQQAALQAALKTFAKIQQ 299
flgL PRK07701
flagellar hook-associated protein FlgL; Validated
 3-288 2.17e-21

flagellar hook-associated protein FlgL; Validated


Pssm-ID: 181087 [Multi-domain]  Cd Length: 298  Bit Score: 91.59  E-value: 2.17e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   3 MYINTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEGAM 82
Cdd:PRK07701   1 MRVTQNMLANNFLRNINSNLEKLDKYQEQLSTGKKITRPSDDPVVAMKSLRYRTDLAEVEQYQKNASDAKSWLENTESAL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347  83 DEITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRIsSDTTFGGQKLLDGsYKGSFQVGADAGQTITFKMTS 162
Cdd:PRK07701  81 DQATDILQRARELAVQAANGTNTQTDRQAIAQEIEQLKEQLIQI-ANTQYNGRYIFNG-TKTDTPPVTDDGDNIENSTDS 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 163 AFTISGIASATKGSATVatgTGKEPYSVTNGSGPVDVANMNSIT------TASAAQSAMANLDFMIKAVDSKRAELGAVQ 236
Cdd:PRK07701 159 GDIEFEIAKGNTINVNV---PGDKAFGGQSGGGSNLFEMLDNLEnaldsgDTQGVSNLLSDIDQHIDNVLAVRAELGARS 235

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 754699347 237 NRFDSTIRNQSNVSENLSAARSRIRDADFATETANMTKQNILQQAASSILAQ 288
Cdd:PRK07701 236 NRLELIENRLSDQEVNATKLLSDNEDVDLAEVITDLKTQENVYRAALAVGAR 287
Flagellin_C pfam00700
Bacterial flagellin C-terminal helical region; Flagellins polymerize to form bacterial ...
 215-300 5.26e-20

Bacterial flagellin C-terminal helical region; Flagellins polymerize to form bacterial flagella. There is some similarity between this family and pfam00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate and this is shown to be correct as structurally this family forms an extended helix that interacts with pfam00700.


Pssm-ID: 425827 [Multi-domain]  Cd Length: 86  Bit Score: 82.38  E-value: 5.26e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347  215 MANLDFMIKAVDSKRAELGAVQNRFDSTIRNQSNVSENLSAARSRIRDADFATETANMTKQNILQQAASSILAQANQRPQ 294
Cdd:pfam00700   1 LDLIDEAITDLDSVRADLGAVQNRLESATTNLNNQQDNLKAAISRIEDVDPAEESTRMTKLQIQIQASYSLLSQANQLPQ 80


                  ....*.
gi 754699347  295 SALSLL 300
Cdd:pfam00700  81 SLLNLL 86
PRK06663 PRK06663
flagellar hook-associated protein 3;
3-127 3.79e-15

flagellar hook-associated protein 3;


Pssm-ID: 180648 [Multi-domain]  Cd Length: 419  Bit Score: 75.11  E-value: 3.79e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   3 MYINTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEGAM 82
Cdd:PRK06663   2 MRVSHPMQYNNLKSSLRRQESKMTKLQNQLSTGQRIQKLRDDPTAATHSIRYKSRLFKLDRYQKNIDDGKDRLRYAEGYL 81

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 754699347  83 DEITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRIS 127
Cdd:PRK06663  82 QSITNILQRARELAVQGANGTYQADDKKKIAKEIDELLEDLVDIA 126
PRK13588 PRK13588
flagellin B; Provisional
 141-300 2.15e-14

flagellin B; Provisional


Pssm-ID: 237440 [Multi-domain]  Cd Length: 514  Bit Score: 72.98  E-value: 2.15e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 141 SYKGSFQVGADAGQTITFKMTSAFTISGIASATKGSATVATGTGKEPYSVTNGSGPvdvanmnSITTASAAQSAMANLDF 220
Cdd:PRK13588 361 SGVNFSHVGFHSAQGVAEYTVNLRAVRGIFDANVASAAGANANGAQAETNSQGIGA-------GVTSLKGAMIVMDMAES 433

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 221 MIKAVDSKRAELGAVQNRFDSTIRNQSNVSENLSAARSRIRDADFATETANMTKQNILQQAASSILAQANQRPQSALSLL 300
Cdd:PRK13588 434 ARTQLDKIRSDMGSVQMQLVSTINNISVTQVNVKAAESQIRDVDFAEESANFSKYNILAQSGSFAMAQANAVQQNVLRLL 513
PRK08411 PRK08411
flagellin; Reviewed
 152-300 2.19e-14

flagellin; Reviewed


Pssm-ID: 236260 [Multi-domain]  Cd Length: 572  Bit Score: 73.10  E-value: 2.19e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 152 AGQTITFKMTSAFTISGiASATKGSATVATGTGKEPYSVTNGSGPVDVANMNS------ITTASAAQSAMANLDFMIKAV 225
Cdd:PRK08411 418 SGKNYSVGLSSGIQISS-ASAMSTVYVVSAGSGFSSGSNLSQFAAMKTTAANVkdetagVTTLKGAMAVMDIAETAITNL 496

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 754699347 226 DSKRAELGAVQNRFDSTIRNQSNVSENLSAARSRIRDADFATETANMTKQNILQQAASSILAQANQRPQSALSLL 300
Cdd:PRK08411 497 DQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVDFAAESANYSKANILAQSGSYAMAQANAVQQNVLRLL 571
PRK13589 PRK13589
flagellin A;
152-300 1.13e-13

flagellin A;


Pssm-ID: 172158 [Multi-domain]  Cd Length: 576  Bit Score: 71.21  E-value: 1.13e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 152 AGQTITFKMTSAFTISGIASATKGSATVATGTGkepysVTNGSGPVDVANMNS-----------ITTASAAQSAMANLDF 220
Cdd:PRK13589 421 SGKNYSVGLSQGIQIISSASAMSTVYNVSAGSG-----FSSGSGLSQFATMKTtaagvkdetagVTTLKGAMAVMDIAET 495

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 221 MIKAVDSKRAELGAVQNRFDSTIRNQSNVSENLSAARSRIRDADFATETANMTKQNILQQAASSILAQANQRPQSALSLL 300
Cdd:PRK13589 496 AITNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVDFAAESANFSKYNILAQSGSYAMSQANAVQQNVLKLL 575
PRK12687 PRK12687
flagellin; Reviewed
 7-300 3.14e-10

flagellin; Reviewed


Pssm-ID: 105853 [Multi-domain]  Cd Length: 311  Bit Score: 60.06  E-value: 3.14e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   7 TNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEGAMDEIT 86
Cdd:PRK12687   6 TNTSAMTALQTLRNVSSSLATTQNRISTGYRVATASDNSAYWSIATTMRSDNEALSAVSDALGLGAATVDTMYTALTSVV 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347  87 SMLQRMRTLAQQSANGSNNSD-DRNALQQEYDQLTTEIDRISSDTTFGGQKLLDGSYKGSfqvGADAGQTITFKMTSAFT 165
Cdd:PRK12687  86 GDSKSGLTALKAKLVAAREPGiDRTKIQSEITAIQNDLKNTAGLAVFNGENWLSVDSSPS---SYNATKSVVSSFTRVGG 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 166 ISGIASATKGSATVA-------TGTGKEPYSVTNGSGPVDVANMN------SITTASAAQSAMANLDFMIKAVDSKRAEL 232
Cdd:PRK12687 163 TVAIKTIDVNIAKLAlydtngsSTTGILDKTVTVGTATASVSSIDihlltdSATDLTKLDGYIGIVDQALGSVTQASADL 242

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 754699347 233 GAVQNRFDSTIRNQSNVSENLSAARSRIRDADFATETANMTKQNILQQAASSILAQANQRPQSALSLL 300
Cdd:PRK12687 243 GATKTRIDSNSNFVKSLRDAIDRGVGQLVDADMNAESTRLQALQTQQQLGIQALSIANQGSQSILSLF 310
flgL PRK12717
flagellar hook-associated protein 3;
3-141 2.47e-08

flagellar hook-associated protein 3;


Pssm-ID: 171679 [Multi-domain]  Cd Length: 523  Bit Score: 54.75  E-value: 2.47e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   3 MYINT----NTSSLNAQRNLMNTNKSLDtsytRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTA 78
Cdd:PRK12717   1 MRISTsqfyESSAANYQRNYSNLVKTQE----QASSGIRIQTAADDPVGAARLLQLQQQQAMLDQYSGNITTIKNSLTQE 76

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 754699347  79 EGAMDEITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRISSDTTFGGQKLLDGS 141
Cdd:PRK12717  77 ESTLTSINDTLQRARELAVSAGNGGLTDADRKAIASELKQIEAQLLGLMNSKDANGQYLFAGS 139
flgL PRK08870
flagellar hook-associated protein FlgL; Reviewed
 3-119 1.08e-07

flagellar hook-associated protein FlgL; Reviewed


Pssm-ID: 236345 [Multi-domain]  Cd Length: 404  Bit Score: 52.61  E-value: 1.08e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   3 MYINTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEGAM 82
Cdd:PRK08870   1 MRISTAQMYQQSVNSMLDQQSQLSQLQQQLSSGKKLLTPSDDPVAAAQAVNLSQQSALLDQYTKNINLARNRLQQEESTL 80

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 754699347  83 DEITSMLQRMRTLAQQSANGSNNSDDRNA----LQQEYDQL 119
Cdd:PRK08870  81 GSVEDLLQRARELVVQAGNGSLSDSDRQAiateLQGLRDQL 121
PRK14692 PRK14692
flagellar hook-associated protein FlgL;
3-141 2.66e-06

flagellar hook-associated protein FlgL;


Pssm-ID: 173155 [Multi-domain]  Cd Length: 749  Bit Score: 48.80  E-value: 2.66e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   3 MYINTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEGAM 82
Cdd:PRK14692   1 MRITNKLNFTNSVNNSMGGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQVKESTSRAQEMTQNSMKAL 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 754699347  83 DEITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRIsSDTTFGGQKLLDGS 141
Cdd:PRK14692  81 QDMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIVQL-ANTSVNGQYLFAGS 138
flgL PRK08412
flagellar hook-associated protein FlgL; Validated
 3-141 3.56e-06

flagellar hook-associated protein FlgL; Validated


Pssm-ID: 236261 [Multi-domain]  Cd Length: 827  Bit Score: 48.28  E-value: 3.56e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   3 MYINTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEGAM 82
Cdd:PRK08412   1 MRVTFGSKYNQMNNYQNALQNKLNDVNTQIASGLKIQYGYQDSDVYNQNLKLQYEENTLDQGIDVASSAYTFTLNTDKAL 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 754699347  83 DEITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRIsSDTTFGGQKLLDGS 141
Cdd:PRK08412  81 NEFSKTMEAFKTKLIQAANDVHSETSREAIANDLEALKEHMINL-ANTSIGGEFLFSGS 138
flgL PRK07192
flagellar hook-associated protein FlgL; Reviewed
 3-291 4.35e-06

flagellar hook-associated protein FlgL; Reviewed


Pssm-ID: 235956 [Multi-domain]  Cd Length: 305  Bit Score: 47.32  E-value: 4.35e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   3 MYINTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEGAM 82
Cdd:PRK07192   1 MRISTNTLYSTMLRSIQQLQAGLGKLQQQMSTGKRILTPSDDPIASARLLELSREQSNNSQYADNIANLSNSLNNQEGHL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347  83 DEITSMLQRMRTLAQQSANGSNNSDDRNALQQEYdqltteidRISSDTTFGGQKLLDGSYKGSFQVGADAGQTITF-KMT 161
Cdd:PRK07192  81 SGVNDQLQSIRSLLVAAGNGSLSDEDRSAMATEL--------RSMLDSLLGLANAKDSEGNYLFSGTASNTQPITFdAAG 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 162 SAFTISGiaSATKGSATVATGTgKEPYSVTN----GSGPVDVANM---------NSITTASAAQ------SAMANLDFMI 222
Cdd:PRK07192 153 GTYTYNG--NSDQRQVQVGEGV-QMPVNVTGqsvfQGGGLDVFNTldklidlleTPALPAADAAltaavdEALGAIDDAL 229

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 754699347 223 KAVDSKRAELGAVQNRFDSTIRNQSNVSENLSAARSRIRDADFATETANMTKQNILQQAASSILAQANQ 291
Cdd:PRK07192 230 DNVLTVRTELGSRQNELDLLDGNHEDRKLQYQKILSDLQDLDYAEALSDLSNQMAALEAAQKTFVKINS 298
flgL PRK08073
flagellar hook-associated protein 3;
3-282 1.01e-04

flagellar hook-associated protein 3;


Pssm-ID: 181222 [Multi-domain]  Cd Length: 287  Bit Score: 43.05  E-value: 1.01e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   3 MYINTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQGNRNANDGISVAQTAEGAM 82
Cdd:PRK08073   1 MRVSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLSMSEDPLAASKSFAIQHSLANIEQMQKDVADSKNVLNQTENTL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347  83 DEITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRISSDT-----TFGGQKL------LDGSYKGSfqvgad 151
Cdd:PRK08073  81 SGMSKSLTRVDQLVLQALNGTNDEKELKAIGAEIDQILKQVVYLANTKeqgryVFGGDSAekkpftEDGTYQGG------ 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 152 aGQTITFKMTSAFTISGIASATKGSATVATGTGKEPYSVTNGsgpvDVANMNSITTASAAqsamaNLDFMIkavdSKRAE 231
Cdd:PRK08073 155 -TEDVNWRLNDGYEVKAFRNGEALLTPVINTLKKMVDAMQTG----DQKALQPLLEENKK-----NLDIII----NRTTE 220

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 754699347 232 LGAVQNRFDS--TIRNQSNVSenLSAARSRIRDADFATETANMTKQNILQQAA 282
Cdd:PRK08073 221 VGGTMNTVETfkTILSEQNLA--LQENRKEIEDVDLAVAISDLAYINATYEAT 271
flgL PRK12717
flagellar hook-associated protein 3;
194-291 3.43e-04

flagellar hook-associated protein 3;


Pssm-ID: 171679 [Multi-domain]  Cd Length: 523  Bit Score: 42.04  E-value: 3.43e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347 194 SGPVDVANMNSITTASAAQSAMANLDFMIKAVDSKRAELGAVQNRFDSTIRNQSNVSENLSAARSRIRDADFATETANMT 273
Cdd:PRK12717 419 STPTDGDPAARQALRAALASALGNLASAIDQVDTARSSIGARGNALDIQGTTNESLSLANTTTQSSIRDSDPAEATTRLT 498

                         90
                 ....*....|....*...
gi 754699347 274 KQNILQQAASSILAQANQ 291
Cdd:PRK12717 499 LQQTMLEASQLAFVKISQ 516
flgL PRK12718
flagellar hook-associated protein FlgL; Provisional
 3-147 1.91e-03

flagellar hook-associated protein FlgL; Provisional


Pssm-ID: 79176 [Multi-domain]  Cd Length: 510  Bit Score: 39.79  E-value: 1.91e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754699347   3 MYINTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDD--AAGLQISNRLTSQVNGLDQGNRNANDGISVAQTaeG 80
Cdd:PRK12718   1 MRLSTALIYQNGLNGVLNQEAAMARLQEQLSSGRRVLTPADDplAAALAVNVSQTSSMNSNYDANRKQAEQALGAQT--N 78

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 754699347  81 AMDEITSMLQRMRTLAQQSANGSNNSDDRNALQQEYDQLTTEIDRISSDTTFGGQKLLDGsYKGSFQ 147
Cdd:PRK12718  79 TLQSVVKNMQEMLKRVVEAGNGTMSDADRQALVIALKGAREELVGLANATDGNGQYLFSG-YKGFTQ 144
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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