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Conserved domains on  [gi|754752380|ref|WP_042116932|]
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DUF3802 family protein [Photobacterium leiognathi]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3802 super family cl13694
Protein of unknown function (DUF3802); This family of proteins is found in bacteria. Proteins ...
 8-118 9.97e-43

Protein of unknown function (DUF3802); This family of proteins is found in bacteria. Proteins in this family are typically between 114 and 143 amino acids in length. There is a conserved KNLFD sequence motif.


The actual alignment was detected with superfamily member pfam12290:

Pssm-ID: 432457  Cd Length: 111  Bit Score: 135.95  E-value: 9.97e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754752380    8 LVAHTDGYEALIEYLASNLTLFEGASASDQGVTIEEVVTDLIATQLMAVFSQNPDIEQDIRFQLMQEADSVMADLHQVLE 87
Cdd:pfam12290   1 MVVESDGYDALIEYLTENLGLFETQSGDTADETVEELVEDQLAANLMVVCEQNPELSFAQRFDVVREADAIVYDLEEVLA 80

                          90       100       110
                  ....*....|....*....|....*....|.
gi 754752380   88 GVWLREPTNEQINFLEDFISLVKNLFDSAIA 118
Cdd:pfam12290  81 GVWNQKATPEQVAFIDEFIGLIKNLFDSAIS 111
 
Name Accession Description Interval E-value
DUF3802 pfam12290
Protein of unknown function (DUF3802); This family of proteins is found in bacteria. Proteins ...
 8-118 9.97e-43

Protein of unknown function (DUF3802); This family of proteins is found in bacteria. Proteins in this family are typically between 114 and 143 amino acids in length. There is a conserved KNLFD sequence motif.


Pssm-ID: 432457  Cd Length: 111  Bit Score: 135.95  E-value: 9.97e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754752380    8 LVAHTDGYEALIEYLASNLTLFEGASASDQGVTIEEVVTDLIATQLMAVFSQNPDIEQDIRFQLMQEADSVMADLHQVLE 87
Cdd:pfam12290   1 MVVESDGYDALIEYLTENLGLFETQSGDTADETVEELVEDQLAANLMVVCEQNPELSFAQRFDVVREADAIVYDLEEVLA 80

                          90       100       110
                  ....*....|....*....|....*....|.
gi 754752380   88 GVWLREPTNEQINFLEDFISLVKNLFDSAIA 118
Cdd:pfam12290  81 GVWNQKATPEQVAFIDEFIGLIKNLFDSAIS 111
 
Name Accession Description Interval E-value
DUF3802 pfam12290
Protein of unknown function (DUF3802); This family of proteins is found in bacteria. Proteins ...
 8-118 9.97e-43

Protein of unknown function (DUF3802); This family of proteins is found in bacteria. Proteins in this family are typically between 114 and 143 amino acids in length. There is a conserved KNLFD sequence motif.


Pssm-ID: 432457  Cd Length: 111  Bit Score: 135.95  E-value: 9.97e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754752380    8 LVAHTDGYEALIEYLASNLTLFEGASASDQGVTIEEVVTDLIATQLMAVFSQNPDIEQDIRFQLMQEADSVMADLHQVLE 87
Cdd:pfam12290   1 MVVESDGYDALIEYLTENLGLFETQSGDTADETVEELVEDQLAANLMVVCEQNPELSFAQRFDVVREADAIVYDLEEVLA 80

                          90       100       110
                  ....*....|....*....|....*....|.
gi 754752380   88 GVWLREPTNEQINFLEDFISLVKNLFDSAIA 118
Cdd:pfam12290  81 GVWNQKATPEQVAFIDEFIGLIKNLFDSAIS 111
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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