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Conserved domains on  [gi|757521491|ref|WP_042784526|]
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MULTISPECIES: TonB-dependent siderophore receptor [Serratia]

Protein Classification

TonB-dependent siderophore receptor( domain architecture ID 11469152)

TonB-dependent siderophore receptor acts as a channel to allow import of extracellular nutrients such as iron-siderophore complexes; similar to Yersinia enterocolitica ferrioxamine receptor

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
FhuE COG4773
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ...
38-729 0e+00

Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];


:

Pssm-ID: 443805 [Multi-domain]  Cd Length: 692  Bit Score: 646.57  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  38 AAADETMVVTADAqssvtAPVKGIVAKESAAGTKTAAPLSKTPQSISVVTREQMNDQEPASVADALNYTSGViTTYRGNS 117
Cdd:COG4773   29 ATTLPEVTVTGTA-----EGTGGYTAKSSSTATKLDTPLRETPQSVSVVTRQLIEDQGATTLDDALRNVPGV-TVSSYDG 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 118 NRNDEVISRGFRYAPKLLDGLhfglSSQNGGAGQIDPWLLERVEMVHGPAGVLYGQVSPGGVVVMTSKRPTAQSIHEVKF 197
Cdd:COG4773  103 GGRDSFSIRGFSIDNYLRDGL----PLGGFGGGQPDTANLERVEVLKGPAGLLYGAGSPGGLVNLVTKRPTAEPQGEVSL 178
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 198 STGNRHLAETAFDFGGKLNDDNTLFYRLNGIARTEHEFVKDSKQQRVAIAPAFTWLPNEDTSFTLLTSYQNDPKAGSRNF 277
Cdd:COG4773  179 SAGSWDTYRATADVGGPLNEDGTLRYRLNAAYEDGDSFRDGVDNRRTLIAPSLDWDLTDDTTLTLGAEYQDDDSTGDRGF 258
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 278 LPRAGTLFptsagYVPYDFNISEPsFNKSRREQASIGYSLEHNFSDALSFTQNLRFTHRDEDYKYLVYNVNSKVNDHTVT 357
Cdd:COG4773  259 LPLDGTLL-----DLPRSTNLGEP-WDYYDTETTTLFAELEHRFNDDWSLRANARYSDSDRDGRSAYAYGAPDAATGTLT 332
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 358 RMAQHETQMTNEFGVDNQLKGLFDTGEVKHTVLGGLDYRYSHIDskmyRDRGNDYPIDWANPVRPSIDGSTLALASSDLK 437
Cdd:COG4773  333 RYASARDGDSRSDSLDANLNGKFETGGLEHTLLVGADYSRYDSD----SDSATAGTINIYNPVYGNLPEPDFDASDTDTT 408
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 438 TlNQVGVYLQDQLAWN-NWNLLLSGRQDWSQVNTRDRTsGGKEQTYNDAQFTGRAGLLYAFDNGISPYVSYSTSFDPNLY 516
Cdd:COG4773  409 T-RQTGLYAQDQISLTdRLSLLLGGRYDWYETDSTNRL-GGSTTSYDDSAFTPRAGLVYDLTPGLSLYASYSESFEPQSG 486
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 517 PSAPGaDPLKPTTGKQTEVGVKYQIPGGNTLLTLSWFDITQRNVASY-NRLTSAYEQIGEVKSKGIEAEVHAQPTPEIKL 595
Cdd:COG4773  487 ADNNG-NPLDPETGKQYEAGVKGELFDGRLNATLAVFDITQKNVATTdPDNPNFYVQVGEVRSRGVELELSGELTPGLNL 565
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 596 IAAYTYTDVVTKDSNSADEiGHSPAGIPRHAASAWGSYSFLSGALNGLTVGSGVRYIGDAPADATGQYDVPHYTLYDAMV 675
Cdd:COG4773  566 IAGYTYTDAKITKDADALE-GKRLTNVPRHTASLWTTYRFPSGALKGLGLGGGVRYVGERYGDAANTFTLPSYTLVDAGA 644
                        650       660       670       680       690
                 ....*....|....*....|....*....|....*....|....*....|....
gi 757521491 676 KYDLGqaspalRGAALQLNVQNLTDKKYVSSCSGEYACFYGSGRSVIASVNYRW 729
Cdd:COG4773  645 RYDLG------KNWTLQLNVNNLFDKKYYASSGSRGYVYYGAPRNVRLSLSYKF 692
 
Name Accession Description Interval E-value
FhuE COG4773
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ...
38-729 0e+00

Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];


Pssm-ID: 443805 [Multi-domain]  Cd Length: 692  Bit Score: 646.57  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  38 AAADETMVVTADAqssvtAPVKGIVAKESAAGTKTAAPLSKTPQSISVVTREQMNDQEPASVADALNYTSGViTTYRGNS 117
Cdd:COG4773   29 ATTLPEVTVTGTA-----EGTGGYTAKSSSTATKLDTPLRETPQSVSVVTRQLIEDQGATTLDDALRNVPGV-TVSSYDG 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 118 NRNDEVISRGFRYAPKLLDGLhfglSSQNGGAGQIDPWLLERVEMVHGPAGVLYGQVSPGGVVVMTSKRPTAQSIHEVKF 197
Cdd:COG4773  103 GGRDSFSIRGFSIDNYLRDGL----PLGGFGGGQPDTANLERVEVLKGPAGLLYGAGSPGGLVNLVTKRPTAEPQGEVSL 178
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 198 STGNRHLAETAFDFGGKLNDDNTLFYRLNGIARTEHEFVKDSKQQRVAIAPAFTWLPNEDTSFTLLTSYQNDPKAGSRNF 277
Cdd:COG4773  179 SAGSWDTYRATADVGGPLNEDGTLRYRLNAAYEDGDSFRDGVDNRRTLIAPSLDWDLTDDTTLTLGAEYQDDDSTGDRGF 258
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 278 LPRAGTLFptsagYVPYDFNISEPsFNKSRREQASIGYSLEHNFSDALSFTQNLRFTHRDEDYKYLVYNVNSKVNDHTVT 357
Cdd:COG4773  259 LPLDGTLL-----DLPRSTNLGEP-WDYYDTETTTLFAELEHRFNDDWSLRANARYSDSDRDGRSAYAYGAPDAATGTLT 332
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 358 RMAQHETQMTNEFGVDNQLKGLFDTGEVKHTVLGGLDYRYSHIDskmyRDRGNDYPIDWANPVRPSIDGSTLALASSDLK 437
Cdd:COG4773  333 RYASARDGDSRSDSLDANLNGKFETGGLEHTLLVGADYSRYDSD----SDSATAGTINIYNPVYGNLPEPDFDASDTDTT 408
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 438 TlNQVGVYLQDQLAWN-NWNLLLSGRQDWSQVNTRDRTsGGKEQTYNDAQFTGRAGLLYAFDNGISPYVSYSTSFDPNLY 516
Cdd:COG4773  409 T-RQTGLYAQDQISLTdRLSLLLGGRYDWYETDSTNRL-GGSTTSYDDSAFTPRAGLVYDLTPGLSLYASYSESFEPQSG 486
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 517 PSAPGaDPLKPTTGKQTEVGVKYQIPGGNTLLTLSWFDITQRNVASY-NRLTSAYEQIGEVKSKGIEAEVHAQPTPEIKL 595
Cdd:COG4773  487 ADNNG-NPLDPETGKQYEAGVKGELFDGRLNATLAVFDITQKNVATTdPDNPNFYVQVGEVRSRGVELELSGELTPGLNL 565
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 596 IAAYTYTDVVTKDSNSADEiGHSPAGIPRHAASAWGSYSFLSGALNGLTVGSGVRYIGDAPADATGQYDVPHYTLYDAMV 675
Cdd:COG4773  566 IAGYTYTDAKITKDADALE-GKRLTNVPRHTASLWTTYRFPSGALKGLGLGGGVRYVGERYGDAANTFTLPSYTLVDAGA 644
                        650       660       670       680       690
                 ....*....|....*....|....*....|....*....|....*....|....
gi 757521491 676 KYDLGqaspalRGAALQLNVQNLTDKKYVSSCSGEYACFYGSGRSVIASVNYRW 729
Cdd:COG4773  645 RYDLG------KNWTLQLNVNNLFDKKYYASSGSRGYVYYGAPRNVRLSLSYKF 692
PRK10044 PRK10044
ferrichrome outer membrane transporter; Provisional
32-728 0e+00

ferrichrome outer membrane transporter; Provisional


Pssm-ID: 236643 [Multi-domain]  Cd Length: 727  Bit Score: 636.80  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  32 FAQNAFAAADETMVVTADA--QSSVTAPVKGIVAKESAAGTKTAAPLSKTPQSISVVTREQMNDQEPASVADALNYTSGV 109
Cdd:PRK10044  30 YAQAAVEPKEETITVTAAPapQESAWGPAATIAAKRSATGTKTDTPIEKTPQSISVVTAEEMALHQPKSVKEALSYTPGV 109
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 110 ITTYRGNSNRNDEVISRGFRYAP----KLLDGLHfgLSSQNGGAGQIDPWLLERVEMVHGPAGVLYGQVSPGGVVVMTSK 185
Cdd:PRK10044 110 SVGTRGASNTYDHLIIRGFAASGqsqnNYLDGLK--LQGNFYNDAVIDPYMLERAELMRGPVSVLYGKSNPGGLLNMVSK 187
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 186 RPTAQSIHEVKFSTGNRHLAETAFDFGGKLNDDNTLFYRLNGIARTEHEFVKDSKQQRVAIAPAFTWLPNEDTSFTLLTS 265
Cdd:PRK10044 188 RPTTEPLKEVQFKMGTDNLFQTGFDFSDALDDDGVYSYRLTGLARSANAQQKGSEEQRYAIAPSFTWRPDDKTNFTFLSY 267
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 266 YQNDPKAGSRNFLPRAGTLFP-TSAGYVPYDFNISEPSfNKSRREQASIGYSLEHNFSDALSFTQNLRFTHRDEDYKYLV 344
Cdd:PRK10044 268 FQNEPETGYYGWLPKEGTVEPlPNGKRLPTDFNEGAKN-NTYSRNEKMVGYSFDHEFNDTFTVRQNLRYAENKTSQRSVY 346
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 345 YNVNSKVNDHTVTRMAQHETQMTNEFGVDNQLKGLFDTGEVKHTVLGGLDYRYSH--IDSkmyrDRGNDYPIDWAN---P 419
Cdd:PRK10044 347 GYGVCSDKGHYLNRGYVVDDEKLQNFSVDTQLQSKFATGDVDHTLLTGVDFMRMRndINA----WFGYADSVPLLNlygP 422
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 420 VRPSIDGSTLALASSDLKTLNQVGVYLQDQLAWNNWNLLLSGRQDWSQVNTRDRTSGGKEQTyNDAQFTGRAGLLYAFDN 499
Cdd:PRK10044 423 VNTDFDFNANSGPYQILNKQKQTGLYVQDQAEWDKWLVTLGGRYDWADQSSLNRVNGTTDKR-DDKQFTWRGGVNYLFDN 501
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 500 GISPYVSYSTSFDPNLYPSAPGaDPLKPTTGKQTEVGVKYQIPGGNTLLTLSWFDITQRNVASYNRLTSAYE-QIGEVKS 578
Cdd:PRK10044 502 GITPYFSYSESFEPSSGTGKDG-NIFAPSKGKQYEAGVKYVPKDRPIVVTGAVYQLTKTNNLTADPENSFFSvQGGEIRA 580
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 579 KGIEAEVHAQPTPEIKLIAAYTYTDV-VTKDSNSAdeiGHSPAGIPRHAASAWGSYSFLSGALNGLTVGSGVRYIGDAPA 657
Cdd:PRK10044 581 RGVELEAKAALSANVNVTGSYTYTDAeYTTDTTYK---GNTPAQVPKHMASLWADYTFFDGPLSGLTLGTGGRYTGSSYG 657
                        650       660       670       680       690       700       710
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 757521491 658 DATGQYDVPHYTLYDAMVKYDLGQAspALRGAALQLNVQNLTDKKYVSSCSGEYACFYGSGRSVIASVNYR 728
Cdd:PRK10044 658 DPANSFKVGSYTVVDALVKYDLARF--GMAGSSVALNVNNLFDREYVASCFNTYGCFWGAERQVVATATFR 726
ligand_gated_channel cd01347
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...
82-729 1.75e-121

TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.


Pssm-ID: 238657 [Multi-domain]  Cd Length: 635  Bit Score: 377.18  E-value: 1.75e-121
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  82 SISVVTREQMNDQEPASVADALNYTSGViTTYRGNSNRNDEVISRGF--RYAPKLLDGL--HFGLSSQNGGAGQIDPWLL 157
Cdd:cd01347    1 SVSVITAEDIEKQPATSLADLLRRIPGV-SVTRGGGGGGSTISIRGFgpDRTLVLVDGLplASSNYGRGVDLNTIPPELI 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 158 ERVEMVHGPAGVLYGQVSPGGVVVMTSKRPTAQSIHEVKFSTGNR---HLAETAFDFGGKLNDDNTLFYRLNGIARTEHE 234
Cdd:cd01347   80 ERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSDnsgSSGGGGFDVSGALADDGAFGARLYGAYRDGDG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 235 FV------KDSKQQRVAIAPAFTWLPNEDTSFTLLTSYQNDPKAGSRNFLPRAGTlfPTSAGYVPYDFNISEPSFNKSRR 308
Cdd:cd01347  160 TIdgdgqaDDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGT--GSSLGGGPSSNTNGDRDWDYRDR 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 309 EQASIGYSLEHNFSDA-LSFTQNLRFTHRDEDYKYLVYNVNSKVNDHTVTRMAQHETQMTNEFGVDNQLKGLFDTGEVKH 387
Cdd:cd01347  238 YRKRASLGLEHDLNDTgWTLRANLSYSYTDNDGDPLILNGGNNAAGGDLGRSGYSSERDTTQLGFDAGLNAPFGTGPVAH 317
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 388 TVLGGLDYRYSHIDSKMYrdrgndypidwanpvrpsidgstlalassdlktlnqvGVYLQDQLAWN-NWNLLLSGRQDWS 466
Cdd:cd01347  318 TLTLGVEYRREELDEKQT-------------------------------------ALYAQDTIELTdDLTLTLGLRYDHY 360
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 467 QVNTRDRTSGGKEQTYNDAQFTGRAGLLYAFDNGISPYVSYSTSFD-PNLYPSAP----------GADPLKPTTGKQTEV 535
Cdd:cd01347  361 DQDSKDTIAGGTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRaPSLGELYGggshggtaavGNPNLKPEKSKQYEL 440
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 536 GVKYQiPGGNTLLTLSWFDITQRNVASYNR------LTSAYEQIGEVKSKGIEAEVHAQPTPEIKLIAAYTYTDVVTKDS 609
Cdd:cd01347  441 GLKYD-PGDGLTLSAALFRIDIKNEIVSTPtntglgLVTVYVNGGKARIRGVELEASYDLTDGLGLTGSYTYTDTEVKRT 519
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 610 NSADEiGHSPAGIPRHAASAWGSYSFlsgALNGLTVGSGVRYIGDAPADATGQYD---VPHYTLYDAMVKYDLGqaspal 686
Cdd:cd01347  520 DGATT-GNRLPGIPKHTANLGLDYEL---PDEGLTAGGGVRYRGKQYADTANGNNtvkVPGYTLVDLSASYQFT------ 589
                        650       660       670       680
                 ....*....|....*....|....*....|....*....|....*.
gi 757521491 687 RGAALQLNVQNLTDKKYVSSCS---GEYACFYGSGRSVIASVNYRW 729
Cdd:cd01347  590 KNLTLRLGVNNLFDKDYYTSLSvrgSGLYGYYGPGRTYYLSVSYKF 635
TonB-siderophor TIGR01783
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ...
78-728 1.68e-114

TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273805 [Multi-domain]  Cd Length: 651  Bit Score: 359.80  E-value: 1.68e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491   78 KTPQSISVVTREQMNDQEPASVADALNYTSGVITTYRGNSNRNDEVISRGFRYAPK----LLDGLHFGLssqNGGAGQID 153
Cdd:TIGR01783   1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTQFGNITIRGFGLEVDidnvYLDGVPLLS---RGNLAIVD 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  154 PWLLERVEMVHGPAGVLYGQVSPGGVVVMTSKRPTAQSIHEVKFSTGNRHLAETAFDFGGKLNDDNTLFYRLNGIARTEH 233
Cdd:TIGR01783  78 PAMVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGADGTFRGRLNGARQDGD 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  234 EFVKDSKQQRVAIAPAFTWLPNEDTSFTLLTSYQNDPKAGSRNFLPRAGTLFPTSagyVPYDFNISEPSFNKS-RREQAS 312
Cdd:TIGR01783 158 SFYDGAGEETRLGATATDWQLDDRTLLRLGAYYQKERDRGGYGGLPASGGTSGRD---LSSDRYLGTSSNRNYdDREYLS 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  313 IGYSLEHNFSDALSFTQNLRFTHRDED-YKYLVYNVNSkvNDHTVTRMAQHETQMTNEFGVDNQLKGLFDTGEVKHTVLG 391
Cdd:TIGR01783 235 YGLSLEYQFNDVWTGKQNLRYSYFDTDsNQVQASGYSS--DGGLFGRSLTVVNVKQDRVQIDAGLDGEFETGPIEHDLLL 312
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  392 GLDYRYSHID----SKMYRDrgNDYPIDWANPVRPSIDGSTLALA-SSDLKTLNqvGVYLQDQLAWNNWNLLLSGRQDWs 466
Cdd:TIGR01783 313 GVSYGQRTTNrfnnTGYPSD--NIYSLTATSSARTDIGDSPKDRAlSSTTKALN--GVALQRILLADKWTLTLGGRYDS- 387
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  467 qvNTRDRTSGGKEQTY--NDAQFTGRAGLLYAFDNGISPYVSYSTSFDPNLY---PSAPGADPLKPTTGKQTEVGVKYQi 541
Cdd:TIGR01783 388 --VDVKSNNGVAGSTGkrDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYypkGAGNSGDILEPEKGKNYELGVRYD- 464
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  542 PGGNTLLTLSWFDITQRN--VASYNRLTsAYEQIGEVKSKGIEAEVHAQPTPEIKLIAAYTYTDVVTKDSNSADEIGHSP 619
Cdd:TIGR01783 465 LGDSLLATAALFRITKDNqlVQDPVNGT-FSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFTEDTNGDTQGNTV 543
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  620 AGIPRHAASAWGSYSFLSGaLNGLTVGSGVRYIGDAPADATGQYDVPHYTLYDAMVKYDLgqasPALRGAALQLNVQNLT 699
Cdd:TIGR01783 544 PFVPKHTASLWASYAPPVG-DNGLTLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDL----TKKKNLTLALNVNNLF 618
                         650       660       670
                  ....*....|....*....|....*....|..
gi 757521491  700 DKKYVSSCS---GEYACFYGSGRSVIASVNYR 728
Cdd:TIGR01783 619 DRDYYTSGYrwgPSAYIYPGAPRTVGLSVSYD 650
TonB_dep_Rec pfam00593
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
255-728 3.27e-56

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.


Pssm-ID: 395474 [Multi-domain]  Cd Length: 475  Bit Score: 199.61  E-value: 3.27e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  255 NEDTSFTLLTSYQNDPKAGSRNFLPRAGTLFPTSAGYVPYDFNisePSFNKSRREQASIGYSLEHNFSDALSFTQNLRFT 334
Cdd:pfam00593  10 GDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYG---RDYSDTDRKRLSLGYDYDLGDGLSWLSTLRLGLR 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  335 HRDEDYKYLVYNVNSKVNDHTvtrmaQHETQMTNEFGVDNQLKGLFDtgeVKHTVLGGLDYRYSHIDSKMYRDRGNDYPI 414
Cdd:pfam00593  87 YSSLDGDYTSNSSGLSGAGDY-----LSDDRLYGLYGLDGDLELSLD---LSHDLLLGVELRTAGLDYRRLDDDAYDPYD 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  415 DWANPVRPSIDGSTlalassdlktlNQVGVYLQDQLAW-NNWNLLLSGRQDWSQVNTRDRTSGGKEQTYNDAQFTGRAGL 493
Cdd:pfam00593 159 PANPSSSSYSDTTT-----------DSYGLYLQDNIKLtDRLTLTLGLRYDHYSTDGDDGNGGGDNFSRSYSAFSPRLGL 227
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  494 LYAFDNGISPYVSYSTSFD-PNLYPSAP------------GADPLKPTTGKQTEVGVKYQipGGNTLLTLSWFDITQRNV 560
Cdd:pfam00593 228 VYKPTDNLSLYASYSRGFRaPSLGELYGsgsgggggavagGNPDLKPETSDNYELGLKYD--DGRLSLSLALFYIDIKNL 305
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  561 ASYNRLTSA-------YEQIGEVKSKGIEAEVHAQPTPEIKLIAAYTYTDvvTKDSNSADEIGHSPAGIPRHAASAWGSY 633
Cdd:pfam00593 306 ITSDPDGPGlggtvytYTNVGKARIRGVELELSGRLWGLGLSGGGYTYTD--ADDDADADDTGNPLPNVPRHTANLGLTY 383
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  634 SFLSGalnGLTVGSGVRYIGDAP---ADATGQYDVPHYTLYDAMVKYDLGqaspalRGAALQLNVQNLTDK---KYVSSC 707
Cdd:pfam00593 384 DFPLG---GWGARLGARYVGSGErryGDAANTFKTPGYTLVDLSAGYRLN------KNLTLRLGVNNLFDKyykRYYSSG 454
                         490       500
                  ....*....|....*....|.
gi 757521491  708 SGEYACFYGSGRSVIASVNYR 728
Cdd:pfam00593 455 GGNLGGYPGPGRTFYLGLSYK 475
 
Name Accession Description Interval E-value
FhuE COG4773
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ...
38-729 0e+00

Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];


Pssm-ID: 443805 [Multi-domain]  Cd Length: 692  Bit Score: 646.57  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  38 AAADETMVVTADAqssvtAPVKGIVAKESAAGTKTAAPLSKTPQSISVVTREQMNDQEPASVADALNYTSGViTTYRGNS 117
Cdd:COG4773   29 ATTLPEVTVTGTA-----EGTGGYTAKSSSTATKLDTPLRETPQSVSVVTRQLIEDQGATTLDDALRNVPGV-TVSSYDG 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 118 NRNDEVISRGFRYAPKLLDGLhfglSSQNGGAGQIDPWLLERVEMVHGPAGVLYGQVSPGGVVVMTSKRPTAQSIHEVKF 197
Cdd:COG4773  103 GGRDSFSIRGFSIDNYLRDGL----PLGGFGGGQPDTANLERVEVLKGPAGLLYGAGSPGGLVNLVTKRPTAEPQGEVSL 178
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 198 STGNRHLAETAFDFGGKLNDDNTLFYRLNGIARTEHEFVKDSKQQRVAIAPAFTWLPNEDTSFTLLTSYQNDPKAGSRNF 277
Cdd:COG4773  179 SAGSWDTYRATADVGGPLNEDGTLRYRLNAAYEDGDSFRDGVDNRRTLIAPSLDWDLTDDTTLTLGAEYQDDDSTGDRGF 258
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 278 LPRAGTLFptsagYVPYDFNISEPsFNKSRREQASIGYSLEHNFSDALSFTQNLRFTHRDEDYKYLVYNVNSKVNDHTVT 357
Cdd:COG4773  259 LPLDGTLL-----DLPRSTNLGEP-WDYYDTETTTLFAELEHRFNDDWSLRANARYSDSDRDGRSAYAYGAPDAATGTLT 332
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 358 RMAQHETQMTNEFGVDNQLKGLFDTGEVKHTVLGGLDYRYSHIDskmyRDRGNDYPIDWANPVRPSIDGSTLALASSDLK 437
Cdd:COG4773  333 RYASARDGDSRSDSLDANLNGKFETGGLEHTLLVGADYSRYDSD----SDSATAGTINIYNPVYGNLPEPDFDASDTDTT 408
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 438 TlNQVGVYLQDQLAWN-NWNLLLSGRQDWSQVNTRDRTsGGKEQTYNDAQFTGRAGLLYAFDNGISPYVSYSTSFDPNLY 516
Cdd:COG4773  409 T-RQTGLYAQDQISLTdRLSLLLGGRYDWYETDSTNRL-GGSTTSYDDSAFTPRAGLVYDLTPGLSLYASYSESFEPQSG 486
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 517 PSAPGaDPLKPTTGKQTEVGVKYQIPGGNTLLTLSWFDITQRNVASY-NRLTSAYEQIGEVKSKGIEAEVHAQPTPEIKL 595
Cdd:COG4773  487 ADNNG-NPLDPETGKQYEAGVKGELFDGRLNATLAVFDITQKNVATTdPDNPNFYVQVGEVRSRGVELELSGELTPGLNL 565
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 596 IAAYTYTDVVTKDSNSADEiGHSPAGIPRHAASAWGSYSFLSGALNGLTVGSGVRYIGDAPADATGQYDVPHYTLYDAMV 675
Cdd:COG4773  566 IAGYTYTDAKITKDADALE-GKRLTNVPRHTASLWTTYRFPSGALKGLGLGGGVRYVGERYGDAANTFTLPSYTLVDAGA 644
                        650       660       670       680       690
                 ....*....|....*....|....*....|....*....|....*....|....
gi 757521491 676 KYDLGqaspalRGAALQLNVQNLTDKKYVSSCSGEYACFYGSGRSVIASVNYRW 729
Cdd:COG4773  645 RYDLG------KNWTLQLNVNNLFDKKYYASSGSRGYVYYGAPRNVRLSLSYKF 692
PRK10044 PRK10044
ferrichrome outer membrane transporter; Provisional
32-728 0e+00

ferrichrome outer membrane transporter; Provisional


Pssm-ID: 236643 [Multi-domain]  Cd Length: 727  Bit Score: 636.80  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  32 FAQNAFAAADETMVVTADA--QSSVTAPVKGIVAKESAAGTKTAAPLSKTPQSISVVTREQMNDQEPASVADALNYTSGV 109
Cdd:PRK10044  30 YAQAAVEPKEETITVTAAPapQESAWGPAATIAAKRSATGTKTDTPIEKTPQSISVVTAEEMALHQPKSVKEALSYTPGV 109
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 110 ITTYRGNSNRNDEVISRGFRYAP----KLLDGLHfgLSSQNGGAGQIDPWLLERVEMVHGPAGVLYGQVSPGGVVVMTSK 185
Cdd:PRK10044 110 SVGTRGASNTYDHLIIRGFAASGqsqnNYLDGLK--LQGNFYNDAVIDPYMLERAELMRGPVSVLYGKSNPGGLLNMVSK 187
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 186 RPTAQSIHEVKFSTGNRHLAETAFDFGGKLNDDNTLFYRLNGIARTEHEFVKDSKQQRVAIAPAFTWLPNEDTSFTLLTS 265
Cdd:PRK10044 188 RPTTEPLKEVQFKMGTDNLFQTGFDFSDALDDDGVYSYRLTGLARSANAQQKGSEEQRYAIAPSFTWRPDDKTNFTFLSY 267
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 266 YQNDPKAGSRNFLPRAGTLFP-TSAGYVPYDFNISEPSfNKSRREQASIGYSLEHNFSDALSFTQNLRFTHRDEDYKYLV 344
Cdd:PRK10044 268 FQNEPETGYYGWLPKEGTVEPlPNGKRLPTDFNEGAKN-NTYSRNEKMVGYSFDHEFNDTFTVRQNLRYAENKTSQRSVY 346
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 345 YNVNSKVNDHTVTRMAQHETQMTNEFGVDNQLKGLFDTGEVKHTVLGGLDYRYSH--IDSkmyrDRGNDYPIDWAN---P 419
Cdd:PRK10044 347 GYGVCSDKGHYLNRGYVVDDEKLQNFSVDTQLQSKFATGDVDHTLLTGVDFMRMRndINA----WFGYADSVPLLNlygP 422
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 420 VRPSIDGSTLALASSDLKTLNQVGVYLQDQLAWNNWNLLLSGRQDWSQVNTRDRTSGGKEQTyNDAQFTGRAGLLYAFDN 499
Cdd:PRK10044 423 VNTDFDFNANSGPYQILNKQKQTGLYVQDQAEWDKWLVTLGGRYDWADQSSLNRVNGTTDKR-DDKQFTWRGGVNYLFDN 501
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 500 GISPYVSYSTSFDPNLYPSAPGaDPLKPTTGKQTEVGVKYQIPGGNTLLTLSWFDITQRNVASYNRLTSAYE-QIGEVKS 578
Cdd:PRK10044 502 GITPYFSYSESFEPSSGTGKDG-NIFAPSKGKQYEAGVKYVPKDRPIVVTGAVYQLTKTNNLTADPENSFFSvQGGEIRA 580
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 579 KGIEAEVHAQPTPEIKLIAAYTYTDV-VTKDSNSAdeiGHSPAGIPRHAASAWGSYSFLSGALNGLTVGSGVRYIGDAPA 657
Cdd:PRK10044 581 RGVELEAKAALSANVNVTGSYTYTDAeYTTDTTYK---GNTPAQVPKHMASLWADYTFFDGPLSGLTLGTGGRYTGSSYG 657
                        650       660       670       680       690       700       710
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 757521491 658 DATGQYDVPHYTLYDAMVKYDLGQAspALRGAALQLNVQNLTDKKYVSSCSGEYACFYGSGRSVIASVNYR 728
Cdd:PRK10044 658 DPANSFKVGSYTVVDALVKYDLARF--GMAGSSVALNVNNLFDREYVASCFNTYGCFWGAERQVVATATFR 726
Fiu COG4774
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
71-729 0e+00

Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];


Pssm-ID: 443806 [Multi-domain]  Cd Length: 639  Bit Score: 565.66  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  71 KTAAPLSKTPQSISVVTREQMNDQEPASVADALNYTSGViTTYRGNSNRNDEVISRGFRY-APKLLDGLhfglssQNGGA 149
Cdd:COG4774    1 KTDTPLLDTPQSVTVVTRELIEDQGATSLADALRNVPGV-TFGAGEGGNGDSFSIRGFSAsGDIYVDGL------RDPGQ 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 150 GQIDPWLLERVEMVHGPAGVLYGQVSPGGVVVMTSKRPTAQSIHEVKFSTGNRHLAETAFDFGGKLNDDntLFYRLNGIA 229
Cdd:COG4774   74 YRRDTFNLERVEVLKGPASVLYGRGSPGGVINLVTKRPTDEPFTEVTLTYGSDGQRRATLDVNGPLGDD--LAYRLNGMY 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 230 RTEHEFVKDSKQQRVAIAPAFTWLPNEDTSFTLLTSYQNDpkagsrNFLPRAG--TLFPTSAGYVPYDFNISEPSfNKSR 307
Cdd:COG4774  152 RDSDSYRDGVDNDRWGIAPSLTWRLGDRTRLTLDYEYQDD------DRTPDYGvpAVANGRPVDVDRSTFYGQPD-DYSD 224
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 308 REQASIGYSLEHNFSDALSFTQNLRFTHRDEDYKYlVYNVNSKVNDhTVTRMAQHETQMTNEFGVDNQLKGLFDTGEVKH 387
Cdd:COG4774  225 SETDSATLRLEHDFNDNWTLRNALRYSDYDRDYRN-TYPTGGNATG-TVTRSAYRRDQDNDTLSNQTDLTGKFDTGGVKH 302
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 388 TVLGGLDYRYSHIDSKMYRDRGNDYPIDWANPVRPSIDGSTLALASSDLKTLNQVGVYLQDQLAWN-NWNLLLSGRQDWS 466
Cdd:COG4774  303 TLLAGVEYSREDSDNARYSGGGTAPTVNLYNPVYGAPVTGPTLGGADNDSRTDTTGLYLQDTISLTdRWSLLAGLRYDRF 382
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 467 QVNTRDRTSGGKEQTYNDAQFTGRAGLLYAFDNGISPYVSYSTSFDPN--LYPSAPGADPLKPTTGKQTEVGVKYQIPGG 544
Cdd:COG4774  383 DTDYTDRTTGATTSSYDDSAFSPRAGLVYKPTPNLSLYASYSTSFNPGggAPSLSNAGQALDPEKSRQYEVGVKWDLLDG 462
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 545 NTLLTLSWFDITQRNVASYNRLTSA-YEQIGEVKSKGIEAEVHAQPTPEIKLIAAYTYTDVVTKDSNSADEIGHSPAGIP 623
Cdd:COG4774  463 RLSLTAALFRIEKTNVRTTDPANPGvYVQTGEQRSRGVELEATGELTPGWSVLAGYTYLDAEITKSANAANVGNRLPNVP 542
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 624 RHAASAWGSYSFlsgALNGLTVGSGVRYIGDAPADATGQYDVPHYTLYDAMVKYDLGqaspalRGAALQLNVQNLTDKKY 703
Cdd:COG4774  543 RHSASLWTTYDL---PLPGLTLGGGVRYVGSRYADAANTVKLPSYTRFDAGASYRLN------KNLTLRLNVNNLTDKRY 613
                        650       660
                 ....*....|....*....|....*.
gi 757521491 704 VSSCSGEYACFYGSGRSVIASVNYRW 729
Cdd:COG4774  614 YASAYGSGYVTPGAPRTVLLSASYRF 639
PRK14050 PRK14050
TonB-dependent siderophore receptor;
32-729 3.69e-165

TonB-dependent siderophore receptor;


Pssm-ID: 237595 [Multi-domain]  Cd Length: 728  Bit Score: 493.16  E-value: 3.69e-165
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  32 FAQNAFAAADETMVVTA--DAQSSVTAPVKGIVAKESAAGTKTAAPLSKTPQSISVVTREQMNDQEPAS-VADALNYTSG 108
Cdd:PRK14050  30 AAQEGNTTQLETIVVEGgnAASATATGPVDGYVAKATATGSKTDTPITEIPQSVSVVGRQEMDDRGVTNkVDEALRYTPG 109
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 109 VITTYRGNSNRNDEVISRGFRYAPK--LLDGLHfgLSSQNGGAGQIDPWLLERVEMVHGPAGVLYGQVSPGGVVVMTSKR 186
Cdd:PRK14050 110 VLSQPFGTDGDTDWFYIRGFDATQTgvFLDGLN--LFSYGFGGFQIDPFMLERVEVLKGPASVLYGGSNPGGIVNMVSKR 187
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 187 PTAQSIHEVKFSTGNRHLAETAFDFGGKLNDDNTLFYRLNGIARTEHEFVKDSKQQRVAIAPAFTWLPNEDTSFTLLTSY 266
Cdd:PRK14050 188 PLDEPLYYTEIGINSYGNAFTGFDVGDKLSDDGTVRYRVTGKVAGGDNYSDYSEDLRGFIMPQITYAPDDATSLTVYGYL 267
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 267 QN-DPKAGSRNFLPRAGTLFPTSAGYVPYDFNISEPSFNKSRREQASIGYSLEHNFSDALSFTQNLR--FTHRDEDYKYL 343
Cdd:PRK14050 268 SGlDQVHVGNGFLPYVGTVVDAPFGKIDRDAFYGEPDIDNGSYAQQMLGYEFSHEFDNGWTFSQNARygHLHKHEKGPYT 347
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 344 -------VYNVNSKVNDHTVTRMAQHETQMTNEFGVDNQLKGLFDTGEVKHTVLGGLDYRYSHIDSkmYRDRGNDYPIDW 416
Cdd:PRK14050 348 ygyvggaTGLPDPTGPDYMLNRIGFEHRSKVDSFSIDNRLEGEFDTGALTHNLLFGLDYKYYRLDQ--VQACCGATPISA 425
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 417 ANPVRPSIDGSTLALASSDLkTLNQVGVYLQDQLAWNN-WNLLLSGRQDWSQVNTRDRTsgGKEQTYNDAQFTGRAGLLY 495
Cdd:PRK14050 426 TNPVYGTTQGANFVYLDQIL-TQQQIGIYAQDQIRFGDgWLVTLNGRYDYVDTDSDARI--GTSYESNDGALSGRAGLAY 502
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 496 AFDNGISPYVSYSTSFDPNLYPSAPGAdPLKPTTGKQTEVGVKYQ---IPGgntLLTLSWFDITQRNVASYNRLTSAYEQ 572
Cdd:PRK14050 503 EFDNGLTPYVSAATFFNPLVGTLASGP-PLKPEEGEQYEAGIKYEpsfIDG---LITASVFQITKKNVTVTDPLTFASTQ 578
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 573 IGEVKSKGIEAEVHAQPTPEIKLIAAYTYTDV-VTKDSNSaDEIGHSPAGIPRHAASAWGSYSFLSGALNGLTVGSGVRY 651
Cdd:PRK14050 579 LGEVRSRGFELEGKVNLDDNWKALASFTYTDLeITEDANP-SLIGNSPYLVPETQASLWLDYAVTDGAFEGVSLGAGVRY 657
                        650       660       670       680       690       700       710
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 757521491 652 IGDAPADATGQYDVPHYTLYDAMVKYDLGQAspalrGAAlqLNVQNLTDKKYVSSCSGEYACFYGSGRSVIASVNYRW 729
Cdd:PRK14050 658 QGESWADEANTLKVPAATLFDAAIRYEKNDW-----GAS--LNVANLFDKEYVAGCQGLLVCGYGESRTITLKLSKKW 728
PRK14049 PRK14049
ferrioxamine B receptor precursor protein; Provisional
35-729 2.38e-141

ferrioxamine B receptor precursor protein; Provisional


Pssm-ID: 172541 [Multi-domain]  Cd Length: 726  Bit Score: 431.63  E-value: 2.38e-141
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  35 NAFAAADETMVVTADAQSSVTApvKGIVAKESAAGTKTAAPLSKTPQSISVVTREQMNDQEPASVADALNYTSGVITTYR 114
Cdd:PRK14049  37 NEASTALETLVVNGGSGGVITA--DGYVATSSATGAKVDTPFLETPQSISSVTEQQLKDRNPQTLLETLAYTPGARVGAF 114
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 115 GNSNRNDEVISRGF--RYAPKLLDGLHfglssQNGGAGQI---DPWLLERVEMVHGPAGVLYGQVSPGGVVVMTSKRPTA 189
Cdd:PRK14049 115 GFDPRFDAFFVRGFdvTYTGVFRDNLR-----QPGASSSIfktEPYGLEGVSILRGPSSALYGASGAGGLFNLITKRPTE 189
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 190 QSIHEVKFSTGNRHLAETAFDFGGKLNDDNTLFYRLNGIAR---TEHEFVKDSkqqRVAIAPAFTWLPNEDTSFTLLTSY 266
Cdd:PRK14049 190 EPLREVQVQYGTNNRYQGQFDFSGPVNETDPVYYRLTGLLRdadTEQVGVPDD---RAYIAPAFTWKPDEDTRLTVLGEY 266
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 267 QNDPKAGSRNFL--PRAGTLFPTSAGyvpydfnisEPSFNKSRREQASIGYSLEHNFSDALSFTQNLRFTHRDEDYKYLV 344
Cdd:PRK14049 267 SRTKTGGTAAYYndPLTGEVTDIFAG---------NPAFNDSVQKQGRIGYEFEHRLNDTFVFRQNARVSTLNIDADWAF 337
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 345 YNVNSKVNDHTVTRMAQHETQMTNEFGVDNQLKGLFDTGEVKHTVLGGLDYRYShiDSKMYRDRGNDYPIDWANPV--RP 422
Cdd:PRK14049 338 AYAPNAADPTLLDSSAGTYDERLTAFVIDNQLEAKFDTGAFEHTLLAGVDYTKL--RFRALNGRGVSPPLDTKNPTqgRP 415
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 423 SidgSTLALASSDLKTLNQVGVYLQDQLAWNNWNLLLSGRQDWSQVNTRD---RTSGGKEQTYNDAQFTGRAGLLYAFDN 499
Cdd:PRK14049 416 V---AAIDFSTRTVQDQWQLGTYLQDQIRYDAWTLTAGGRYDWVSTDTDTtdlATDSLTTVSQKDKEFSGRIGLTYETDF 492
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 500 GISPYVSYSTSFDPNLYPSAPGADPLKPTTGKQTEVGVKYQIPGGNTLLTLSWFDITQRNVASYNRL------TSAYEQI 573
Cdd:PRK14049 493 GLAPYISYSTAFSPNAGFNRATNQPFKPTESEQQEVGVKYLLPNSNTLITAALFNIDQTNGLYYEVVflaagpTNIQVQR 572
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 574 GEVKSKGIEAEVHAQPTPEIKLIAAYTYTDVVTKDSnSADEIGHSPAGIPRHAASAWGSYSFL-SGALNGLTVGSGVRYI 652
Cdd:PRK14049 573 GKLRSRGFELEANTSLDNGLSLIASYTYTDVKIIQG-PEGTIGNEVSSVPNHMASAWAHYTLPeGGPLYGLGLGAGARFV 651
                        650       660       670       680       690       700       710
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 757521491 653 GDAPADATGQYDVPHYTLYDAMVKYDLGQASPALRGAALQLNVQNLTDKKYvSSCSGEYaCFYGSGRSVIASVNYRW 729
Cdd:PRK14049 652 GSSYGNDQNTFKNSSRVLFDASVGYDFAAIDKKYEGLMLQVNATNLFDRRK-AVCTAGF-CYRDQGRTVIGSLRYNW 726
ligand_gated_channel cd01347
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...
82-729 1.75e-121

TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.


Pssm-ID: 238657 [Multi-domain]  Cd Length: 635  Bit Score: 377.18  E-value: 1.75e-121
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  82 SISVVTREQMNDQEPASVADALNYTSGViTTYRGNSNRNDEVISRGF--RYAPKLLDGL--HFGLSSQNGGAGQIDPWLL 157
Cdd:cd01347    1 SVSVITAEDIEKQPATSLADLLRRIPGV-SVTRGGGGGGSTISIRGFgpDRTLVLVDGLplASSNYGRGVDLNTIPPELI 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 158 ERVEMVHGPAGVLYGQVSPGGVVVMTSKRPTAQSIHEVKFSTGNR---HLAETAFDFGGKLNDDNTLFYRLNGIARTEHE 234
Cdd:cd01347   80 ERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSDnsgSSGGGGFDVSGALADDGAFGARLYGAYRDGDG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 235 FV------KDSKQQRVAIAPAFTWLPNEDTSFTLLTSYQNDPKAGSRNFLPRAGTlfPTSAGYVPYDFNISEPSFNKSRR 308
Cdd:cd01347  160 TIdgdgqaDDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGT--GSSLGGGPSSNTNGDRDWDYRDR 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 309 EQASIGYSLEHNFSDA-LSFTQNLRFTHRDEDYKYLVYNVNSKVNDHTVTRMAQHETQMTNEFGVDNQLKGLFDTGEVKH 387
Cdd:cd01347  238 YRKRASLGLEHDLNDTgWTLRANLSYSYTDNDGDPLILNGGNNAAGGDLGRSGYSSERDTTQLGFDAGLNAPFGTGPVAH 317
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 388 TVLGGLDYRYSHIDSKMYrdrgndypidwanpvrpsidgstlalassdlktlnqvGVYLQDQLAWN-NWNLLLSGRQDWS 466
Cdd:cd01347  318 TLTLGVEYRREELDEKQT-------------------------------------ALYAQDTIELTdDLTLTLGLRYDHY 360
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 467 QVNTRDRTSGGKEQTYNDAQFTGRAGLLYAFDNGISPYVSYSTSFD-PNLYPSAP----------GADPLKPTTGKQTEV 535
Cdd:cd01347  361 DQDSKDTIAGGTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRaPSLGELYGggshggtaavGNPNLKPEKSKQYEL 440
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 536 GVKYQiPGGNTLLTLSWFDITQRNVASYNR------LTSAYEQIGEVKSKGIEAEVHAQPTPEIKLIAAYTYTDVVTKDS 609
Cdd:cd01347  441 GLKYD-PGDGLTLSAALFRIDIKNEIVSTPtntglgLVTVYVNGGKARIRGVELEASYDLTDGLGLTGSYTYTDTEVKRT 519
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 610 NSADEiGHSPAGIPRHAASAWGSYSFlsgALNGLTVGSGVRYIGDAPADATGQYD---VPHYTLYDAMVKYDLGqaspal 686
Cdd:cd01347  520 DGATT-GNRLPGIPKHTANLGLDYEL---PDEGLTAGGGVRYRGKQYADTANGNNtvkVPGYTLVDLSASYQFT------ 589
                        650       660       670       680
                 ....*....|....*....|....*....|....*....|....*.
gi 757521491 687 RGAALQLNVQNLTDKKYVSSCS---GEYACFYGSGRSVIASVNYRW 729
Cdd:cd01347  590 KNLTLRLGVNNLFDKDYYTSLSvrgSGLYGYYGPGRTYYLSVSYKF 635
TonB-siderophor TIGR01783
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ...
78-728 1.68e-114

TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273805 [Multi-domain]  Cd Length: 651  Bit Score: 359.80  E-value: 1.68e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491   78 KTPQSISVVTREQMNDQEPASVADALNYTSGVITTYRGNSNRNDEVISRGFRYAPK----LLDGLHFGLssqNGGAGQID 153
Cdd:TIGR01783   1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTQFGNITIRGFGLEVDidnvYLDGVPLLS---RGNLAIVD 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  154 PWLLERVEMVHGPAGVLYGQVSPGGVVVMTSKRPTAQSIHEVKFSTGNRHLAETAFDFGGKLNDDNTLFYRLNGIARTEH 233
Cdd:TIGR01783  78 PAMVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGADGTFRGRLNGARQDGD 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  234 EFVKDSKQQRVAIAPAFTWLPNEDTSFTLLTSYQNDPKAGSRNFLPRAGTLFPTSagyVPYDFNISEPSFNKS-RREQAS 312
Cdd:TIGR01783 158 SFYDGAGEETRLGATATDWQLDDRTLLRLGAYYQKERDRGGYGGLPASGGTSGRD---LSSDRYLGTSSNRNYdDREYLS 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  313 IGYSLEHNFSDALSFTQNLRFTHRDED-YKYLVYNVNSkvNDHTVTRMAQHETQMTNEFGVDNQLKGLFDTGEVKHTVLG 391
Cdd:TIGR01783 235 YGLSLEYQFNDVWTGKQNLRYSYFDTDsNQVQASGYSS--DGGLFGRSLTVVNVKQDRVQIDAGLDGEFETGPIEHDLLL 312
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  392 GLDYRYSHID----SKMYRDrgNDYPIDWANPVRPSIDGSTLALA-SSDLKTLNqvGVYLQDQLAWNNWNLLLSGRQDWs 466
Cdd:TIGR01783 313 GVSYGQRTTNrfnnTGYPSD--NIYSLTATSSARTDIGDSPKDRAlSSTTKALN--GVALQRILLADKWTLTLGGRYDS- 387
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  467 qvNTRDRTSGGKEQTY--NDAQFTGRAGLLYAFDNGISPYVSYSTSFDPNLY---PSAPGADPLKPTTGKQTEVGVKYQi 541
Cdd:TIGR01783 388 --VDVKSNNGVAGSTGkrDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYypkGAGNSGDILEPEKGKNYELGVRYD- 464
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  542 PGGNTLLTLSWFDITQRN--VASYNRLTsAYEQIGEVKSKGIEAEVHAQPTPEIKLIAAYTYTDVVTKDSNSADEIGHSP 619
Cdd:TIGR01783 465 LGDSLLATAALFRITKDNqlVQDPVNGT-FSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFTEDTNGDTQGNTV 543
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  620 AGIPRHAASAWGSYSFLSGaLNGLTVGSGVRYIGDAPADATGQYDVPHYTLYDAMVKYDLgqasPALRGAALQLNVQNLT 699
Cdd:TIGR01783 544 PFVPKHTASLWASYAPPVG-DNGLTLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDL----TKKKNLTLALNVNNLF 618
                         650       660       670
                  ....*....|....*....|....*....|..
gi 757521491  700 DKKYVSSCS---GEYACFYGSGRSVIASVNYR 728
Cdd:TIGR01783 619 DRDYYTSGYrwgPSAYIYPGAPRTVGLSVSYD 650
CirA COG1629
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
69-708 7.87e-96

Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];


Pssm-ID: 441236 [Multi-domain]  Cd Length: 644  Bit Score: 310.61  E-value: 7.87e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  69 GTKTAAPLSKTPQSISVVTREQMNDQEPASVADALNYTSGVITTYRGNSNRNdeVISRGFRYAPK----LLDGLHFGLSS 144
Cdd:COG1629    8 ATRTDESLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVSVTSAGGGAGQ--ISIRGFGGGGNrvlvLVDGVPLNDPS 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 145 Q-NGGAGQIDPWLLERVEMVHGPAGVLYGQVSPGGVVVMTSKRPTAQSIHEVKFSTGNRHLAETAFDFGGKlndDNTLFY 223
Cdd:COG1629   86 GgDGGLSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGKGGEVSASYGSYGTYRASLSLSGG---NGKLAY 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 224 RLNGIARTEHEFVKDSKQQRVAIAPAFTWLPNEDTSFTLLTSYQNDpkAGSRNFLPRAGTLFPTSAGYvpYDFNISEPSF 303
Cdd:COG1629  163 RLSASYRDSDGYRDNSDSDRYNLRAKLGYQLGDDTRLTLSASYSDS--DQDSPGYLTLAALRPRGAMD--DGTNPYSNDT 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 304 NKSRREQASIGYSLEHnFSDALSFTQNLRFTHRDEDYKYLVYNVnskvndHTVTRMAQHETQMTNEFGVDNQLKGLFDTG 383
Cdd:COG1629  239 DDNTRDRYSLSLEYEH-LGDGLKLSASAYYRYDDTDLDSDFTPT------PADGGTLEQTDFDNRTYGLELRLTYDLGFG 311
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 384 EvKHTVLGGLDYRYSHIDskmyrdrGNDYPIDWANPVRPSIDGSTLALASSDlktlnQVGVYLQDQLAWN-NWNLLLSGR 462
Cdd:COG1629  312 G-KHTLLVGLDYQRQDLD-------GSGYPLDLGSGSLPTLTSGADDDGTTT-----SLALYAQDTYKLTdKLTLTAGLR 378
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 463 QDWSQVNTRDRTSG--GKEQTYNDAQFTGRAGLLYAFDNGISPYVSYSTSFDPN---------LYPSAPGADPLKPTTGK 531
Cdd:COG1629  379 YDYVSYDVDDTVTGtdSASGSRSYSAFSPSLGLTYQLSPNLSLYASYSRGFRAPtfgelyangTDPYSVGNPDLKPETST 458
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 532 QTEVGVKYQIPGGNTLLTLSWFDITQRN------VASYNRLTSAYEQIGEVKSKGIEAEVHAQPTPEIKLIAAYTYTD-- 603
Cdd:COG1629  459 NYELGLRYRLLDGRLSLSLALFYSDVDNeilsvpLPNDSGFSTYYTNAGKARSYGVELELSYQLTPGLSLNASYSYTDak 538
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 604 VVTKDSNSADEIGHSPAGIPRHAASAWGSYSFlsgaLNGLTVGSGVRYIGDAPADAT-GQYDVPHYTLYDAMVKYDLGqa 682
Cdd:COG1629  539 FDDDTDGSADLDGNRLPGVPPLTANLGLTYEF----PGGWSLGLGVRYVGDRYLDDAnTQGAPGGYTLVDLGAGYRFG-- 612
                        650       660
                 ....*....|....*....|....*.
gi 757521491 683 spalRGAALQLNVQNLTDKKYVSSCS 708
Cdd:COG1629  613 ----DNLTLSLGVDNLFDKKYATSLS 634
FepA COG4771
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ...
69-681 4.77e-59

Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];


Pssm-ID: 443803 [Multi-domain]  Cd Length: 612  Bit Score: 210.48  E-value: 4.77e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  69 GTKTAAPLSKTPQSISVVTREQMNDQEPASVADALNYTSGVITTYRGNSNRNDEVISRGF--RYAPKLLDG--LHFGLSS 144
Cdd:COG4771   34 ATRTEQSLSDAPASVSVITAEEIEKLGATDLADALRLLPGVSVTRSGGRGGSSGISIRGLggDRVLVLIDGvpVNNPALG 113
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 145 QNGGAGQIDPWLLERVEMVHGPAGVLYGQVSPGGVVVMTSKRPTAQSIHEVKFSTG--NRHLAETAFDFGGKlndDNTLF 222
Cdd:COG4771  114 GGGDLSYIPPDDIERIEVIRGPASALYGSDAIGGVINIITKKPTDELEGSVSLGYGsnGNGTYSGSLSLGGP---GDKLS 190
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 223 YRLNGIARTEHEF--------VKDSKQQRVAIAPAFTWLPNEDTSFTLLTSYQNDPKAGSrnflpragtlfPTSAGYVPY 294
Cdd:COG4771  191 FLLSGSYRDRDGYldyrnggfVGNSGYERYNLNAKLGYRLSDNHRLSLSGGYSRQDRDGG-----------PPTLGDTEI 259
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 295 DFNISEPSFNKSRREQASIGYslEHNFSDALsftqNLRFTHRDEDYKYLVYNVNSKVNDHTVTRmaqhetqmTNEFGVDN 374
Cdd:COG4771  260 SSDNAGDRDTTTDRGNYSLRY--NGDLGDNL----DLSLYYSRTDRDSTNGSLGGSTGSFSDSD--------DTTYGLEL 325
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 375 QLKGLFDTgevKHTVLGGLDYRYSHIDSKMYRDRGNDypidwanpvrpsidgstlalassdlkTLNQVGVYLQDQLAWN- 453
Cdd:COG4771  326 DLTYPLGG---NHTLTLGAEYRYDDLDSSSFLGGADA--------------------------SRDTYGLFAQDEWKLTd 376
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 454 NWNLLLSGRQDWSQVNTRDrtsggkeqtyNDAQFTGRAGLLYAFDNGISPYVSYSTSF-DPNLY-----------PSAPG 521
Cdd:COG4771  377 KLTLTAGLRYDYYSTFGAS----------NYTAFSPRLGLRYDLSDNLTLRASYGRGFrAPSLAelygsgtgtpgRYVLG 446
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 522 ADPLKPTTGKQTEVGVKYQIPGGNTLLTLSWFD------ITQRNVASYNRLTSAYEQIGEVKSKGIEAEVHAQPTPEIKL 595
Cdd:COG4771  447 NPDLKPETSDNYELGLEYRLGNGGLSLSLTGFYtdikdlIVLVPVGPGPGDVLQYENVGKARTYGLELELKYRLGKGLTL 526
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 596 IAAYTYTDVVTKDSNSADEIghspAGIPRHAASAWGSYSFLSGALNGLTVGSGVRYIGDAPADATGQYdVPHYTLYDAMV 675
Cdd:COG4771  527 TASYTYLDSKIDDGDTGEPL----PNVPPHKANLGLDYRLPKWWLLLLLTRYYGGRYVTPPSGRLEGY-TPGYTLLDLRA 601

                 ....*.
gi 757521491 676 KYDLGQ 681
Cdd:COG4771  602 SYKLTK 607
TonB_dep_Rec pfam00593
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
255-728 3.27e-56

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.


Pssm-ID: 395474 [Multi-domain]  Cd Length: 475  Bit Score: 199.61  E-value: 3.27e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  255 NEDTSFTLLTSYQNDPKAGSRNFLPRAGTLFPTSAGYVPYDFNisePSFNKSRREQASIGYSLEHNFSDALSFTQNLRFT 334
Cdd:pfam00593  10 GDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYG---RDYSDTDRKRLSLGYDYDLGDGLSWLSTLRLGLR 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  335 HRDEDYKYLVYNVNSKVNDHTvtrmaQHETQMTNEFGVDNQLKGLFDtgeVKHTVLGGLDYRYSHIDSKMYRDRGNDYPI 414
Cdd:pfam00593  87 YSSLDGDYTSNSSGLSGAGDY-----LSDDRLYGLYGLDGDLELSLD---LSHDLLLGVELRTAGLDYRRLDDDAYDPYD 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  415 DWANPVRPSIDGSTlalassdlktlNQVGVYLQDQLAW-NNWNLLLSGRQDWSQVNTRDRTSGGKEQTYNDAQFTGRAGL 493
Cdd:pfam00593 159 PANPSSSSYSDTTT-----------DSYGLYLQDNIKLtDRLTLTLGLRYDHYSTDGDDGNGGGDNFSRSYSAFSPRLGL 227
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  494 LYAFDNGISPYVSYSTSFD-PNLYPSAP------------GADPLKPTTGKQTEVGVKYQipGGNTLLTLSWFDITQRNV 560
Cdd:pfam00593 228 VYKPTDNLSLYASYSRGFRaPSLGELYGsgsgggggavagGNPDLKPETSDNYELGLKYD--DGRLSLSLALFYIDIKNL 305
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  561 ASYNRLTSA-------YEQIGEVKSKGIEAEVHAQPTPEIKLIAAYTYTDvvTKDSNSADEIGHSPAGIPRHAASAWGSY 633
Cdd:pfam00593 306 ITSDPDGPGlggtvytYTNVGKARIRGVELELSGRLWGLGLSGGGYTYTD--ADDDADADDTGNPLPNVPRHTANLGLTY 383
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  634 SFLSGalnGLTVGSGVRYIGDAP---ADATGQYDVPHYTLYDAMVKYDLGqaspalRGAALQLNVQNLTDK---KYVSSC 707
Cdd:pfam00593 384 DFPLG---GWGARLGARYVGSGErryGDAANTFKTPGYTLVDLSAGYRLN------KNLTLRLGVNNLFDKyykRYYSSG 454
                         490       500
                  ....*....|....*....|.
gi 757521491  708 SGEYACFYGSGRSVIASVNYR 728
Cdd:pfam00593 455 GGNLGGYPGPGRTFYLGLSYK 475
FecA COG4772
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
36-729 1.86e-55

Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];


Pssm-ID: 443804 [Multi-domain]  Cd Length: 681  Bit Score: 201.70  E-value: 1.86e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  36 AFAAADETMVVTADAQSSVTAPVKgIVAKESAAgtktaAPLSKTPQSISVVTREQMNDQEPASVADALNYTSGVITtyRG 115
Cdd:COG4772    4 ALAAALLLAAAAAAEAATTLETVV-VTGSRAAE-----ARLKDVPGSVSVVDREELENQAATSLREVLRRVPGVNV--QE 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 116 NSNRNDEV-IS-RGF--RYAPK---LLDGLHFGLSSQNGGAGQIDPWL--LERVEMVHGPAGVLYGQVSPGGVVVMTSKR 186
Cdd:COG4772   76 EDGFGLRPnIGiRGLgpRRSRGitlLEDGIPIAPAPYGDPAAYYFPDLerMERIEVLRGAAALRYGPQTVGGAINFVTRT 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 187 -PTAQSIhEVKFSTGNRHLAETAFDFGGKLNDdntLFYRLNGIARTEHEFVKDSKQQRVAIAPAFTWLPNEDTSFTLLTS 265
Cdd:COG4772  156 iPTAFGG-ELRVTGGSFGYRRTHASVGGTVGN---FGYLVEYSRKRGDGFRDNSGFDINDFNAKLGYRLSDRQELTLKFQ 231
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 266 Y----QNDPkagsrnflpraGTLFPTSAG------YVPYDfnisepSFNkSRREQASIGYslEHNFSDALSFTQNLRFTH 335
Cdd:COG4772  232 YydedANTP-----------GGLTDAQFDadprqsYRPAD------QFD-TRRTQLSLRY--EHQLSDNTTLTTTAYYND 291
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 336 RDEDYkylVYNVNSKVNDHTVTRMAQHETQMTNeFGVDNQLKGLFDTGEVKHTVLGGLDYRYSHIDSKMYrdRGNDYPID 415
Cdd:COG4772  292 FSRNW---YIRQNTADPNTPGLGLRGNPRGYRS-YGIEPRLTHRFELGGVPHTLEVGLRYHREEEDRKQY--VNTYGQGR 365
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 416 WANPVRPSIDGSTLALAssdlktlnqvgVYLQDQLAW-NNWNLLLSGRQDWSQVNTRD----RTSGGKEQTYNDAQFTGR 490
Cdd:COG4772  366 SGAGLRRDRRFSADALA-----------AYAQNRFELtGRLTLTPGLRYEHIRRDRTDrystRTGGDDSGSNSYSEFLPG 434
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 491 AGLLYAFDNGISPYVSYSTSFDP----NLYPSAPGADPLKPTTGKQTEVGVKYQIpGGNTLLTLSWFDITQRN----VAS 562
Cdd:COG4772  435 LGLLYQLTDNLQLYANVSRGFEPptfgDLAYGNGGNPDLKPEKSWNYELGTRGRI-GNGLSAEVALFYIDYDNelgsCSA 513
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 563 YNRLTSAYEQIGEVKSKGIEAEVHAQP----TPEIKLIAAYTYTDVVTKDSNSADEIGHSPAGIPRHAASAWGSYSFlsg 638
Cdd:COG4772  514 AGGDRSTFTNAGETRHQGLELALDYDLlkggGLGLPLFAAYTYTDAEFTSDFGPVFAGNRLPYVPRHQLTAGLGYEH--- 590
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 639 alNGLTVGSGVRYIGDAPADA-----TGQY-DVPHYTLYDAMVKYDLGqaspalRGAALQLNVQNLTDKKYVSSCSGEYA 712
Cdd:COG4772  591 --GGWTANLNGRYVSEQFTDAantvaDGSFgKIPSYTVLDLSASYDFG------KNLSLFAGVNNLFDKRYIASRAPNYA 662
                        730
                 ....*....|....*....
gi 757521491 713 C-FY-GSGRSVIASVNYRW 729
Cdd:COG4772  663 AgIRpGPPRTVYAGLRLKF 681
PRK09840 PRK09840
catecholate siderophore receptor Fiu; Provisional
33-728 1.82e-51

catecholate siderophore receptor Fiu; Provisional


Pssm-ID: 182105 [Multi-domain]  Cd Length: 761  Bit Score: 191.56  E-value: 1.82e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  33 AQNAFAAADETMVVTADAQSSVTApvkgivakESAAGTKTAAPLSKTPQSISVVTREQMNDQEPASVADALNYTSGVITT 112
Cdd:PRK09840  33 AAEGQTNADDTLVVEASTPSLYAP--------DQSADPKFSQPLADTTQTITVISEQVIKDQGATNLTEALRNVPGVGTF 104
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 113 Y---RGNSNRNDEVISRGFRYAPKL-LDGLhfglssQNGGAGQIDPWLLERVEMVHGPAGVLYGQVSPGGVVVMTSKRPT 188
Cdd:PRK09840 105 FageNGNTTTGDAIYMRGFDTSNSIyVDGI------RDIGSISRDTFNTEQVEVIKGPSGTDYGRSAPTGSINMISKQPR 178
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 189 AQSIHEVKFSTGNRHLAETAFDFGGKLNDDNTlfYRLNGIARTEHEFVKDS-KQQRVAIAPAFTWLPNEDTS--FTLLTS 265
Cdd:PRK09840 179 NDSGIDASASIGSAWFRRGTLDVNQVIGDTTA--VRLNVMGEKTHDAGRDKvKNERYGVAPSVAFGLGTANRlyLNYLHV 256
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 266 YQND-PKAGSRNF------LPRAGTLFPTSAGYV-PYDFNISEPSFNKSRREQASIgySLEHNFSDALSFTQNLRFTHRD 337
Cdd:PRK09840 257 TQNNtPDGGIPTIglpgysAPSAGRAALNHAGKVdTHNFYGTDSDYDDSTTDTATM--RFEHDINDNTTLRNTTRWSRVK 334
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 338 EDYKYLVYNVN---------SKVNDHTVTRMAQHETQmTNEFgVDNQ--LKGLFDTGEVKHTVLGGLDYRyshidskmyR 406
Cdd:PRK09840 335 QDYLLTAIMGGasnittptpSDVNTWTWSRTANTKDV-SNKI-LTNQtnLTSTFYTGSIGHDVSTGVEFT---------R 403
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 407 DRGNDY---PIDWA-----NPVrPSIDGSTLALASSDLKTL-NQVGVYLQDQLAWN-NWNLLLSGRQD------------ 464
Cdd:PRK09840 404 ETQTNYgvnPVTLPavnlyHPD-SSIHPGGLTRNGANANGQtDTFAIYAFDTLQLTrDWELNGGIRLDnyhteydsatac 482
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 465 ----WSQVNTRDRTSGGKEQTYNDAQFTG-----RAGLLYAFDNGISPYVSYSTSFDP------NLYPSAPGADP----L 525
Cdd:PRK09840 483 ggsgRGAITCPAGVAKGSPVTTVDTAKSGnlvnwKAGALYKLTENGNVYINYAVSQQPpggsnfALAQSGSGNSAnrtdF 562
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 526 KPTTGKQTEVGVKYQIPGGNTLLTLSWFDITQRNVASYNRlTSAYEQIGEVKSKGIEAEVHAQPTPEIKLIAAYTYTDV- 604
Cdd:PRK09840 563 KPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQND-DGTYSQYGKKRVEGYELSVAGNITPAWQVIAGYTQQKAt 641
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 605 VTKDSNSADEIGHSPAGIPRHAASAWGSYSflsgALNGLTVGSGVRYIGDAPADATGQYDVPHYT----LYDAMVKYDLG 680
Cdd:PRK09840 642 VKNGKDVAQDGSSSLPYTPEHAFTLWSQYQ----ATDDLSVGGGARYIGSMHRGSDGAVGTPAFTegywVADAKLGYRVN 717
                        730       740       750       760       770
                 ....*....|....*....|....*....|....*....|....*....|
gi 757521491 681 qaspalRGAALQLNVQNLTDKKYVSSC--SGeYACFYGSGRSVIASVNYR 728
Cdd:PRK09840 718 ------RNLDLQLNVYNLFDTDYVASInkSG-YRYHPGEPRTFLLTANMH 760
TonB-hemin TIGR01785
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ...
68-729 1.04e-37

TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273807 [Multi-domain]  Cd Length: 665  Bit Score: 149.85  E-value: 1.04e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491   68 AGTKTAAPLSKTPQSISVVTREQMNDQEPASVADALNYTSGVITTYRGNSNRNDEVIsRGFR--YAPKLLDG--LHFGLS 143
Cdd:TIGR01785   7 TATRTRQVLSEAPASVSVISGEQIESKQANNLADALNTVPGVDVTGGGRPPGQSINI-RGLQdnRVLVVVDGarQNYQRG 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  144 SQNGGAGQIDPWLLERVEMVHGPAGVLYGQVSPGGVVVMTSK------RPTAQSIHEVKFSTGNRHLAETAFDFGGKLND 217
Cdd:TIGR01785  86 GAHNGSLFVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKdaadllRPGQLFGGLAKLSYGSNNNSFGGSVAVAGRLD 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  218 DNTLFYrLNGIARTEHEF-------VKDSKQQRVAIAPAFTWLPNEDT--SFTLLTsYQNDPKAGSRNFLPRAgtlfpts 288
Cdd:TIGR01785 166 DNLDAL-VAATYRDGGNYrngnkeeATNSAYVQKNLLAKLGWQLDDAQrlEFSYFT-TEGSLDEAQNSGPGTE------- 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  289 agyvpYDFNISEPSFNKSRREQAsigYSLEHNFSDALSFTQNLRFThrdedykyLVYNVNSKVNDHTVTRMAQHETQMTN 368
Cdd:TIGR01785 237 -----YVLGSSSTLLASSTRDRS---ATLTYNWTPEDNPWLDATAS--------LYYNRTENDNDRSARGVGREEGYQYT 300
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  369 EFGVDNQLKGLFDTGEVKHtVLGGLDYRYSHIDSkmYRDRGNDYPIDWANPvrPSIDGstlalassdlktlNQVGVYLQD 448
Cdd:TIGR01785 301 TYGATLQNTSRFDVASWST-LTYGVDWMKDKRRT--ESFDPNSVTTIVPNP--PSAKE-------------YFFGLFLQD 362
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  449 QLAWNN--WNLLLSGRQDWsQVNTRDRTSGGKEQTYNDAQFTGRAGLLYAFDNGISPYVSYSTSF--------------- 511
Cdd:TIGR01785 363 NIPLLDdrLTLSAGLRYDH-YKLSPKTTADTEAVDRSYSRWSPSLGLSYKPVDWLTLYASYSQGFrapsidelygtgdhp 441
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  512 -DPNLYPSAPGADpLKPTTGKQTEVGvkYQIPGGNTLL-------TLSWFD-----------ITQRNVASYNRLTSAYEQ 572
Cdd:TIGR01785 442 gTPGGYTFAPNPN-LKPETSKTWELG--ANLSFDNLLLdndqlqfKVAYFYndvkdfidltiGVTDNVTAGMNNITQYVN 518
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  573 IGEVKSKGIEAEVHAQpTPEIKLIAAYTYTDVVTKDSNSADeighspAGIPRHAASAWGSYSFLSgalNGLTVGSGVRYI 652
Cdd:TIGR01785 519 IDGARIRGIEASASYD-AGLWATGLSYGYTIGKDQNTNQWL------SNIPPLKLVVTVGYRFPD---RRLDLGAKAAYY 588
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  653 GDAPA-----DATGQYDVPH--YTLYDAMVKYdlgqASPALRGAALQLNVQNLTDKKYVSSCSGEYAcfyGSGRSVIASV 725
Cdd:TIGR01785 589 ERQSEsptteDVAANGLLTTpgYTVVDLYATY----QPNAVKGLTVRFGVNNLTDRKYTPAQSVPGA---GPGRNFKGSV 661

                  ....
gi 757521491  726 NYRW 729
Cdd:TIGR01785 662 KYQF 665
PRK10003 PRK10003
ferric-rhodotorulic acid outer membrane transporter; Provisional
31-727 9.74e-32

ferric-rhodotorulic acid outer membrane transporter; Provisional


Pssm-ID: 236640 [Multi-domain]  Cd Length: 729  Bit Score: 131.91  E-value: 9.74e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  31 PFAQNAFAAADETMVVTADAQSSVTAPVKGIVAKESAAGTKTAAPLSKTPQSISVVTREQMNDQEPASVADALNYTSGvI 110
Cdd:PRK10003  30 PSAAFAAPATEDTVIVEGSATAPVDDGEQDYSVKTTSAGTKMQMTQRDIPQSVSIVSQQRMEDQQLQTLGEVMENTLG-I 108
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 111 TTYRGNSNRNDeVISRGFRYAPKLLDGLHFGLSSQ-NGGAGQIDPWLLERVEMVHGPAGVLYGQVSPGGVVVMTSKRPTA 189
Cdd:PRK10003 109 SKSQADSDRAL-YYSRGFQIDNYMVDGIPTYFESRwNLGDALSDTALFERVEVVRGATGLMTGTGNPSAAINMVRKHATS 187
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 190 QSIH-EVKFSTGNRHLAETAFDFGGKLNDDNTLFYRLNGIARTEHEFVKDSKQQRVAIAPAFTWLPNEDTSFTLLTSYQ- 267
Cdd:PRK10003 188 REFKgDVSAEYGSWNKQRYVADLQSPLTEDGKVRARIVAGYQNNDSWLDRYNSEKTFFSGIVDADLGDLTTLSAGYEYQr 267
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 268 ---NDPKAGSrnfLPRagtlFPTSAGYVPYDFNIS-EPSFNKSRREQASIGYSLEHNFSDALSFTQNLrfTHRDEDYKYL 343
Cdd:PRK10003 268 idvNSPTWGG---LPR----WNTDGSSNSYDRARStAPDWAYNDKEINKVFMTLKQRFADTWQATLNA--THSEVEFDSK 338
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 344 VYNVNSKVNDHTVTRMAQHETQMTNEF---------------GVDNQLKGLFDTGEVKHTVLGGLDYR------YSHIDS 402
Cdd:PRK10003 339 MMYVDAYVDKATGMLVGPYSNYGPGFDyvggtgwnsgkrkvdALDLFADGSYELFGRQHNLMFGGSYSkqnnryFSSWAN 418
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 403 KMYRDRGNDYpiDWaNPVRPSIDGSTLALASSDlkTLNQVGVY------LQDQLawnnwNLLLSGR-QDWSQvntrdrts 475
Cdd:PRK10003 419 IFPDEIGSFY--NF-NGNFPQTDWSPQSLAQDD--TTHMKSLYaatrvsLADPL-----HLILGARyTNWRV-------- 480
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 476 ggKEQTYNDAQ--FTGRAGLLYAFDNGISPYVSYSTSFDPNLYPSAPGaDPLKPTTGKQTEVGVKYQIPGGNTLLTLSWF 553
Cdd:PRK10003 481 --DTLTYSMEKnhTTPYAGLVYDINDNWSTYASYTSIFQPQNDRDSSG-KYLAPITGNNYELGLKSDWMNSRLTTTLAIF 557
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 554 DITQRNVASYNRL-------TSAYEQIGEVKSKGIEAEVHAQPTPEIKLIAAYTYTDVVTKDSNSADeighspAGIPRHA 626
Cdd:PRK10003 558 RIEQDNVAQSTGTpipgsngETAYKAVDGTVSKGVEFELNGAITDNWQLTFGATRYIAEDNEGNAVN------PNLPRTT 631
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 627 ASAWGSYSFlsGALNGLTVGSGVRYIGDAPADATGQY-----DVPHYTLYDAMVKYdlgQASPALrgaALQLNVQNLTDK 701
Cdd:PRK10003 632 VKLFTRYRL--PVMPELTVGGGVNWQNRVYTDTVTPYgtfraEQGSYALVDLFTRY---QVTKNF---SVQGNVNNLFDK 703
                        730       740
                 ....*....|....*....|....*.
gi 757521491 702 KYVSSCSGeyACFYGSGRSVIASVNY 727
Cdd:PRK10003 704 TYDTNVEG--SIVYGAPRNFSITATY 727
Plug pfam07715
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ...
75-179 1.94e-21

TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.


Pssm-ID: 462243 [Multi-domain]  Cd Length: 107  Bit Score: 89.64  E-value: 1.94e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491   75 PLSKTPQSISVVTREQMNDQEPASVADALNYTSGVITTYRGNSNrNDEVISRGF--RYAPKLLDGLHFGLSSQ-NGGAGQ 151
Cdd:pfam07715   1 DLRDTPGSVSVVTAEDIEDQGATNLADALRGVPGVSVSSGGGGG-GSSISIRGFgsNRVLVLVDGVPLNSGGGgSVDLNS 79
                          90       100
                  ....*....|....*....|....*...
gi 757521491  152 IDPWLLERVEMVHGPAGVLYGQVSPGGV 179
Cdd:pfam07715  80 IDPEDIERVEVLKGPASALYGSGAIGGV 107
BtuB COG4206
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
69-333 3.35e-20

Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];


Pssm-ID: 443355 [Multi-domain]  Cd Length: 276  Bit Score: 91.47  E-value: 3.35e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  69 GTKTAAPLSKTPQSISVVTREQMNDQEPASVADALNYTSGVITTYRGNSNRNDEVISRGFRY-APK-LLDGlhFGLSSQN 146
Cdd:COG4206    5 ATRLEQSKSDLTGSVTVIDAEELERSGATSLADALRRVPGVQVSSSGGPGSAASISIRGLGSnQTLvLIDG--VPLNDPS 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 147 GGA---GQIDPWLLERVEMVHGPAGVLYGQVSPGGVVVMTSKRPTAQSIHEVKFSTGNRHLAETAFDFGGKLNDDNTLF- 222
Cdd:COG4206   83 LGGvdlSLIPPDDIERIEVLKGAASALYGSDAIGGVINITTKKGKKGFKGSVSASYGSFGTRRLSASLSGGAGKFSYSLs 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 223 ---YRLNGIARTEHEFVKDSKQQRVAIAPAFTWLPNEDTSFTLLTSYQNDPKAGSRNFLPRAGTLFPTSAGYVPYDFNIS 299
Cdd:COG4206  163 asyRRSDGYRYNDPDLRNNDGYENTSLNARLGYKLGDNGSLSLSGGYSDSERGYPGAVGSDRNLRLSLSLEYKLSDGWSL 242
                        250       260       270
                 ....*....|....*....|....*....|....
gi 757521491 300 EPSFNKSRREQASIGYSLEHNFSDALSFTQNLRF 333
Cdd:COG4206  243 LLLAYYYYDRDYEDGGGDSAGTSNTDGARAGLSY 276
PRK13513 PRK13513
ligand-gated channel protein;
33-702 9.66e-16

ligand-gated channel protein;


Pssm-ID: 184104 [Multi-domain]  Cd Length: 659  Bit Score: 81.35  E-value: 9.66e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  33 AQNAFAAADETMVVTAdaqssvtapvkgivakesaAGTKTAapLSKTPQSISVVTREQMNDQEPASVADALNYTSGVITT 112
Cdd:PRK13513  27 EKTNTATPTDTMVVTA-------------------SGFQQR--IQDAPASISVVTREQLENKAYRDVTDALKDVPGVVVT 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 113 YRGNSNrndEVISRGF--RYAPKLLDGLHFGL-----SSQNGGAGQidPWL-----LERVEMVHGPAGVLYGQVSPGGVV 180
Cdd:PRK13513  86 GGGSTS---DISIRGMaaKYTLILVDGKRVDTrstrpNSDGSGIEQ--GWLpplaaIERIEVVRGPMSSLYGSDAMGGVI 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 181 -VMTSKRPTA--------QSIHEVKFStGNRHlaETAFDFGGKLnDDNTLFYRLNGI--ARTEHEFVKDSKQQRVAIAPA 249
Cdd:PRK13513 161 nIITRKVQKEwhgslradATLQEDSKS-GDIF--QTNAYASGPL-IDGLLGLKVSGLlsHRSEDKIIDGYNEQRMRNGTA 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 250 -FTWLPNEDTSFTL-LTSYQNDpkagsRNflpragtlfpTSAGYvPYDFNiSEPSFNKSRREQASIGYSLEHNFSDALSF 327
Cdd:PRK13513 237 tFSLTPDDNNEFDFeIGRYVQD-----RN----------STPGR-TLALN-GTNSDTQYDRNNYAITHNGYYDFGNSTSY 299
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 328 TQNLRFTHRDEDYKYlvynVNSKVNDHTVtrmaqhetqmtnefgvdnqlkglFDTGEvkHTVLGGLDYRYSHIdskmyRD 407
Cdd:PRK13513 300 IQRDETRNPSRQMKS----VDTIFNTQTS-----------------------FLLDD--HTLSLGGQYRYEEL-----YD 345
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 408 RGNDYPidwanpvrpsidgstlalASSDLKTLNQvgvylqdqlawnnWNLLLSGRQDWSQVNTRDRTSG---GKEQTYND 484
Cdd:PRK13513 346 KGNQLP------------------SASDLNKLTR-------------WSWALFAEDEWQMTNDFALTGGirmDQDQNYGT 394
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 485 aQFTGRAGLLYAFDN------GISP-YVSystsfdPNLYPSAP--------GADP--------LKPTTGKQTEVGVKYQI 541
Cdd:PRK13513 395 -HWTPRLYGVWHLADqwtlkgGVSTgYRS------PDLRQATDnwgqltggGGLPalilgnsdLKPEKSISQEIGILWDN 467
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 542 PGG-NTLLTLSWFD----ITQRNVA---------SYNRLT----SAYEQIGEVKSKGIEAEVHAQPTPEIKLIAAYTYTD 603
Cdd:PRK13513 468 QENlNASVTLFNTDfkdkITEVRNCdttntdgqcVFNGINydfiSDRINVDKANMRGVEATFNWDINQAWSLATNYTFTQ 547
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 604 VVTKdsnSADEIGHSPAGIPRHAASA------------WGSYSFLSGALNGLTVGSgvryigdaPADATgqydvPHYTLY 671
Cdd:PRK13513 548 SEQK---SGAFAGQPLNQMPKHMANAtlnwqttedfatWIRINYRGKTSEYLNRTS--------MGSGT-----PSYTFV 611
                        730       740       750
                 ....*....|....*....|....*....|.
gi 757521491 672 DAMVKYDLGQASPALRGaalqlnVQNLTDKK 702
Cdd:PRK13513 612 DLGASYQLTKELRLMGG------VYNLLDKR 636
PRK13484 PRK13484
IreA family TonB-dependent siderophore receptor;
66-702 1.08e-11

IreA family TonB-dependent siderophore receptor;


Pssm-ID: 139605 [Multi-domain]  Cd Length: 682  Bit Score: 68.11  E-value: 1.08e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  66 SAAGTktAAPLSKTPQSISVVTREQMNDQEPASVADALNYTSGVITTyrGNSNRNDEVIsRGF--RYAPKLLDGL-HFGL 142
Cdd:PRK13484  36 TASGF--TQQLRNAPASVSVITSEQLQKKPVSDLVDAVKDVEGISIT--GGNEKPDISI-RGLsgDYTLILVDGRrQSGR 110
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 143 SSQNGG-----AGQIDPW-LLERVEMVHGPAGVLYGQVSPGGVVVMTSKRPTAQSIHEVkFSTGNrhLAETAFDFGGKLN 216
Cdd:PRK13484 111 ESRPNGsggfeAGFIPPVeAIERIEVIRGPMSSLYGSDAIGGVINIITKPVNNQTWDGV-LGLGG--IIQEHGKFGNSTT 187
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 217 DD---------NTLFYRLNGIA--RTEHEFV-----KDSKQqrvaIAPAFTWLPNEDTSFTLltsyqndpKAGsRNFLPR 280
Cdd:PRK13484 188 NDfylsgplikDKLGLQLYGGMnyRKEDSISqgtpaKDNKN----ITATLQFTPTESQKFVF--------EYG-KNNQVH 254
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 281 agTLFPtsagyvpydfnisepsfNKSRREQASIGYSLEHNfsdalsftqNLRFTHRDEDYKYLVYNVNSKVNDHTVTRMA 360
Cdd:PRK13484 255 --TLTP-----------------GESLDAWTMRGNLKQPN---------SKRETHNSRSHWVAAWNAQGEILHPEIAVYQ 306
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 361 QHETQMTNEFGVD----NQLKGLFDTGEVKHTVlggLDYRYSHIDSKMYRDRGNDYpiDWANPVRPSIDGSTLALASSdl 436
Cdd:PRK13484 307 EKVIREVKSGKKDkynhWDLNYESRKPEITNTI---IDAKVTAFLPENVLTIGGQF--QHAELRDDSATGKKTTETQS-- 379
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 437 KTLNQVGVYLQDQLAWNNwNLLLSG--RQDWSQV-----NTRdrtsggKEQTYN-DAQFTGRAGLLYAFD----NGISPy 504
Cdd:PRK13484 380 VSIKQKAVFIENEYAATD-SLALTGglRLDNHEIygsywNPR------LYAVYNlTDNLTLKGGIAKAFRapsiREVSP- 451
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 505 vSYSTSFDPN---LYpsapGADPLKPTTGKQTEVGVKYQIPGGNTLltlswfDITQRNVASYNRLTS------------- 568
Cdd:PRK13484 452 -GFGTLTQGGasiMY----GNRDLKPETSVTEEIGIIYSNDSGFSA------SATLFNTDFKNKLTSydigtkdpvtgln 520
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 569 --AYEQIGEVKSKGIEAEVHAQPTPEIKLIAAYTYTDVVTKdsnSADEI--GHSPAG-----IPRHAASAWGSYSFlsga 639
Cdd:PRK13484 521 tfIYDNVGEANIRGVELATQIPVYDKWHVSANYTFTDSRRK---SDDESlnGKSLKGeplerTPRHAANAKLEWDY---- 593
                        650       660       670       680       690       700
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 757521491 640 LNGLTVGSGVRYIGDA--PADATGqYDVPHYTlyDAMVKYDLGQASPALRGAALQLNVQNLTDKK 702
Cdd:PRK13484 594 TQDITFYSSLNYTGKQiwAAQRNG-AKVPRVR--NGFTSMDIGLNYQILPDTLINFAVLNVTDRK 655
PRK10064 PRK10064
catecholate siderophore receptor CirA; Provisional
31-729 2.41e-11

catecholate siderophore receptor CirA; Provisional


Pssm-ID: 236646 [Multi-domain]  Cd Length: 663  Bit Score: 67.22  E-value: 2.41e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  31 PFAQNAFAAADETMVVTADAQSSVTAPVkgiVAKESAAGTKtaapLSKTPQSISVVTREQMNDQEPASVADALNYTSGVI 110
Cdd:PRK10064   6 PFVRVGLCASAISCAWPVLAVDDDGETM---VVTASAVEQN----LKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQ 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 111 TTYRGNSNRNDEVISRGFRYAPKLLDGLHfgLSSQNGGAGQID---PWL----LERVEMVHGPAGVLYGQVSPGGVVVMT 183
Cdd:PRK10064  79 LTNEGDNRKGVSIRGLDSSYTLILIDGKR--VNSRNAVFRHNDfdlNWIpvdaIERIEVVRGPMSSLYGSDALGGVVNII 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 184 SKRPTAQSIHEVKFSTG---NRHLAET---AFDFGGKLNDDNTLFYRLNGIARTEHEFVKDSKQQRVAIAPA-------- 249
Cdd:PRK10064 157 TKKIGQKWHGTVTVDTTiqeHRDRGDTyngQFFTSGPLIDGVLGMKAYGSLAKREKDDPQNSTTTDTGETPRiegftsrd 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 250 ----FTWLPNEDTSFTlltsyqndpkagsrnflpragtlfptsAGYVPYDFNISEPSFNKSRREQasIGYSLEHNFsdal 325
Cdd:PRK10064 237 gnveFAWTPNQNHDFT---------------------------AGYGFDRQDRDSDSLDKNRLER--QNYSLSHNG---- 283
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 326 sftqnlRFTHRDEDYKYLVYNVNSKVNDHTVTRMAQHETqmtnefgVDNQLkgLFDTGEVKHTVLGGLDYRYSHIDskmy 405
Cdd:PRK10064 284 ------RWDYGNSELKYYGEKVENKNPGNSSPITSESNS-------IDGKY--TLPLTAINQFLTFGGEWRHDKLS---- 344
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 406 rdrgndypidwanpvrpsiDGSTLALASSDLKTLNQVGVYLQDQLAWNNWNLLLSG-RQDwsqvntrdrtsggKEQTYND 484
Cdd:PRK10064 345 -------------------DAVNLTGGTSSKTSASQYALFVEDEWRIFEPLALTTGvRMD-------------DHETYGD 392
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 485 aQFTGRAGLLYAFDNGISPYVSYSTSFD-PNLYPSAP--------------GADPLKPTTGKQTEVGVKYQ-----IPGG 544
Cdd:PRK10064 393 -HWSPRAYLVYNATDTVTVKGGWATAFKaPSLLQLSPdwtsnscrgackivGSPDLKPETSESWELGLYYMgeegwLEGV 471
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 545 NTLLTLSWFDITQR---------NVA-SYNRLTS-------------AYEQIGEVKSKGIEAEVHAQPTPEIKLIAAYTY 601
Cdd:PRK10064 472 ESSVTVFRNDVDDRisisrtsdvNAApGYQNFVGfetngrgrrvpvfRYYNVNKARIQGVETELKIPFNDEWKLSLNYTY 551
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 602 TDvvTKD-SNSADEighsP-AGIPRHAASawGSYSFLSGALNGLTVGSGVRYIGDAPADATGQYDVPHYTLydamvkYDL 679
Cdd:PRK10064 552 ND--GRDvSNGENK----PlSDLPFHTAN--GTLDWKPLALEDWSFYVSGNYTGQKRADSATAKTPGGYTI------WNT 617
                        730       740       750       760       770
                 ....*....|....*....|....*....|....*....|....*....|
gi 757521491 680 GQASPALRGAALQLNVQNLTDKKyVSSCSGEYAcfyGSGRSVIASVNYRW 729
Cdd:PRK10064 618 GAAWQVTKDVKLRAGVLNLGDKD-LSRDDYSYN---EDGRRYFMAVDYRF 663
PRK13483 PRK13483
ligand-gated channel protein;
32-701 6.41e-11

ligand-gated channel protein;


Pssm-ID: 184080 [Multi-domain]  Cd Length: 660  Bit Score: 65.57  E-value: 6.41e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  32 FAQNAFAAADETMVVTAD--AQSSVTAPVkgivakesaagtktaaplsktpqSISVVTREQMNDQEPASVADALNYTSGV 109
Cdd:PRK13483  24 LAQAAPDKTMETVVVTASgyEQQIRDAPA-----------------------SISVITREDLENRFYRDLTDALLDVPGV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 110 ITTyrGNSNRNDevIS-RGF--RYAPKLLDGLHfgLSSQ----NG-GAGQIDPWL-----LERVEMVHGPAGVLYGQVSP 176
Cdd:PRK13483  81 VVT--GGGDRTD--ISlRGMgsQYTLILVDGKR--QSSRetrpNSdGPGVEQAWTpplaaIERIEVIRGPMSSLYGSDAI 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 177 GGVV-VMTSKRP--------TAQSIHEvKFSTGNRHlaETAFDFGGKLNDDNtLFYRLNG--IARTEHEFV---KDSKQQ 242
Cdd:PRK13483 155 GGVInIITRKVPnewqgevrLDTTLQE-NSDSGNVY--QANFFVNGPLIKDL-LGLQLYGqyTQREEDDIEggyRDKDAR 230
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 243 RVAIAPAFTWLPNEDTSFTLLTSYQNdpkagsrnflpRAGTLFPTSAGYVPYDF----NISEPSFNKSRREQASIGYSLE 318
Cdd:PRK13483 231 SLTAKLALTPNEDHDIMLEVGTSNQE-----------RDSTVGKTVAPLAPGEScgrrGCPESSTTEYERSTVSLSHTGR 299
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 319 HNFSDALSFTQNLRFTHRDEDYKYlvynVNSKVNDHTVTRMAQhetqmtnefgvdnqlkglfdtgevKHTVLGGLDYRYS 398
Cdd:PRK13483 300 WDFGTSDTYIQHEEFDNKSREMKI----KNTDFQSSLVAPLGQ------------------------EHTLTFGAAYNHQ 351
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 399 HIDSKMyrdrgndypidwANPV--RPSIDGSTLALASSDlktlnqvgvylqdqlAW---NNWNLLLSGRQDwsqvntRDR 473
Cdd:PRK13483 352 DLTDET------------SNQIsdLTDISRTQWAVFSED---------------EWriaDDFALTGGLRLD------HDE 398
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 474 TSGGkeqtyndaQFTGRA-GLLYAFDN-----GIspyvsySTSFD-PNLYPSAPG-----------ADP-LKPTTGKQTE 534
Cdd:PRK13483 399 NFGG--------HVSPRVyGVWNLAPSwtvkgGV------STGFRaPSLRQTTPDwgqvsrggniyGNPdLKPETSLNKE 464
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 535 VGVKYQIPGG-NTLLTLSWFD----ITQrnVA-----------SYNRLTSAYEQIGEVKSKGIEAEVHAQPTPEIKLIAA 598
Cdd:PRK13483 465 LGLYYDLGSGlTASLTVFYNEfkdkITR--VAcpatqctdgpnQFGADPTTYVNIDEAVTQGVEASLSYPITSTLSLSGN 542
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 599 YTYTDVVTKDSNSAdeiGHSPAGIPRHAASAWGSYSfLSGALNGLTvgsGVRYIGDAPADATG----QYDVPHYTLYDAM 674
Cdd:PRK13483 543 YTYTDSEQKSGAYK---GSPLNQLPKHLFQASLNWE-PTDRLNSWA---RVNYRGEESQPTTGpsssSFIAPSYTFLDLG 615
                        730       740
                 ....*....|....*....|....*..
gi 757521491 675 VKYDLGqaspalRGAALQLNVQNLTDK 701
Cdd:PRK13483 616 ANYQLT------DNLKLSAGIYNLFDK 636
btuB PRK10641
TonB-dependent vitamin B12 receptor BtuB;
36-583 2.10e-05

TonB-dependent vitamin B12 receptor BtuB;


Pssm-ID: 236730 [Multi-domain]  Cd Length: 614  Bit Score: 47.68  E-value: 2.10e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  36 AFAAADETMVVTAD--AQ--SSVTAPVkgivakesaagtktaaplsktpqsiSVVTREQMNDQEPASVADALNYTSGVIT 111
Cdd:PRK10641  20 AQDTSPDTLVVTANrfQQpvSTVLAPT-------------------------TVVTRDDIDRWQSKSVNDVLRRLPGVDI 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 112 TYRGNSNRNDEVISRGF--RYAPKLLDGLHFGLSSQNGGA--GQIDPWLLERVEMVHGPAGVLYGQVSPGGVVVMTSKRP 187
Cdd:PRK10641  75 AQNGGLGQLSSLFIRGTnsSHVLVLIDGVRLNQAGISGSAdlSQIPISLVQRIEYIRGPRSAVYGSDAIGGVVNIITTRD 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 188 TAqsihevkfstgnrhlaetafdfGGKLNddntlfyrlNGIARTEHEFVKDSKQQRVAiapaftwlpnEDTSFTLLTSYQ 267
Cdd:PRK10641 155 KP----------------------GTTLS---------AGWGSNGYQNYDGSTQQQLG----------DNTRVTLAGDYT 193
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 268 N----DPKAGSRNFLPRagtlFPTSAGYVpydfnisepsfNKsrreqaSIGYSLEHNFSDALS-FTQNLRFTHRdEDYKy 342
Cdd:PRK10641 194 YtkgfDVVAYGNTGTQA----QPDRDGFM-----------SK------TLWGGLEHQFNDQWSgFVRGYGYDNR-TDYD- 250
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 343 LVYNVNSKVNDhtvTRMAQHETQMTnefgvdnqlkGLFDTGEVKHTVLGGL-----DYRYSHI----DSKMYRDRGNDYP 413
Cdd:PRK10641 251 AYYSPGSPLID---TRQLYSQSWDA----------GLRYNGGIYSSQLIASyshskDYNYDPHygryDSSATLDDMKQYN 317
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 414 IDWANPV--------------RPSIDGSTLALasSDLKTLNQVGVYLQDQLAWNNWNLLLSGRQDwsqvntrdrtsggke 479
Cdd:PRK10641 318 VQWGNTVqvghgnisagvdwqKQTTTPGTGYV--PDGYDQRNTGIYLTGQQQIGDVTLEGAARSD--------------- 380
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 480 qtyNDAQF----TGRAGLLYAFDNGISPYVSYSTSFD-PNL---YpSAPGADPLKPTTGKQTEVGVKYQIPGGNTLLTLS 551
Cdd:PRK10641 381 ---DNSQFgwhgTWQTSAGWEFIDGYRFIASYGTAFKaPNLgqlY-GFYGNPNLKPEESKQWEGGFEGLTGPVNWRLSGY 456
                        570       580       590
                 ....*....|....*....|....*....|..
gi 757521491 552 WFDITqrNVASYNRLTSAYEQIGEVKSKGIEA 583
Cdd:PRK10641 457 RNDID--NLIDYDDHTLKYYNVGKATIKGVEW 486
PRK13486 PRK13486
TonB-dependent receptor;
32-188 2.18e-05

TonB-dependent receptor;


Pssm-ID: 139606 [Multi-domain]  Cd Length: 696  Bit Score: 47.71  E-value: 2.18e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  32 FAQNAFAAADETMVVTADAQSSvtapvkgivakesaagtktaaPLSKTPQSISVVTREQMNDQEPASVADALNYTSGVIT 111
Cdd:PRK13486  16 FSASSIAAAEDVMIVSASGYEK---------------------KLTNAAASVSVISQEELQSSQYHDLAEALRSVEGVDV 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 112 TYRGNSNRNDEVISRGF--RYAPKLLDGLHFGLSSQ---NGGAGQIDPWL-----LERVEMVHGPAGVLYGQVSPGGVVV 181
Cdd:PRK13486  75 ESGTGKTGGLEISIRGMpaSYTLILIDGVRQGGSSDvtpNGFSAMNTGFMpplaaIERIEVIRGPMSTLYGSDAMGGVVN 154

                 ....*..
gi 757521491 182 MTSKRPT 188
Cdd:PRK13486 155 IITRKNA 161
PRK13524 PRK13524
FepA family TonB-dependent siderophore receptor;
33-232 2.95e-03

FepA family TonB-dependent siderophore receptor;


Pssm-ID: 237410 [Multi-domain]  Cd Length: 744  Bit Score: 41.17  E-value: 2.95e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  33 AQNAFAAADETMVVTAdAQSSVTAPvkgivakesaagtktaaplsktpqSISVVTREQMNDQEPAS-VADAL-------- 103
Cdd:PRK13524  30 TDDTPASHEDTIVVTA-AEQNLQAP------------------------GVSTITAEDIRKRPPANdVSEIIrtmpgvnl 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 104 --NYTSGvittYRGNsNRNDEVisRGFryAPK----LLDGLHfgLSSQN----GGAGQID---------PWLLERVEMVH 164
Cdd:PRK13524  85 tgNSTSG----QRGN-NRQIDI--RGM--GPEntliLIDGKP--VSSRNsvryGWRGERDtrgdtnwvpPEMIERIEVLR 153
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 757521491 165 GPAGVLYGQVSPGGVVVMTSKRPTAQSIHEVK-FSTGNRHLAE-----TAFDFGGKLNDDntLFYRLNG-IARTE 232
Cdd:PRK13524 154 GPAAARYGNGAAGGVVNIITKKPTGEWHGSWNtYFNAPEHKAEgatkrTNFSLSGPLGDE--LSFRLYGnLNKTQ 226
PRK13528 PRK13528
outer membrane receptor FepA; Provisional
32-188 6.27e-03

outer membrane receptor FepA; Provisional


Pssm-ID: 237413 [Multi-domain]  Cd Length: 727  Bit Score: 39.74  E-value: 6.27e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491  32 FAQNAFAAADETMVVTADAQSSVtapvkgivakesaagtktaaplsKTPQSISVVTREQMNDQEPAS-VADALNYTSGVI 110
Cdd:PRK13528  25 AAESSDDDNGETMVVEATAEQEL-----------------------KQQPGVSIITAEDIKKRPPVNdLSDIIRKMPGVN 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757521491 111 TTyrGNS-------NRNDEVISRGFRYAPKLLDGLhfGLSSQN-------------GGAGQIDPWLLERVEMVHGPAGVL 170
Cdd:PRK13528  82 LT--GNSasgtrgnNRQIDIRGMGPENTLILIDGV--PVTSRNsvryswrgerdtrGDTNWVPPEMVERIEVIRGPAAAR 157
                        170
                 ....*....|....*...
gi 757521491 171 YGQVSPGGVVVMTSKRPT 188
Cdd:PRK13528 158 YGSGAAGGVVNIITKRPT 175
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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