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Conserved domains on  [gi|757601045|ref|WP_042848558|]
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MULTISPECIES: fimbrial protein [Providencia]

Protein Classification

fimbrial protein( domain architecture ID 10007530)

fimbrial protein similar to Escherichia coli fimbrial adapter PapF, which is required for the correct presentation of the PapG adhesin at the distal end of the tip fibrillum

Gene Ontology:  GO:0009289|GO:0007155
PubMed:  1670938|22411982|2890081

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
12-188 2.85e-42

Pilin (type 1 fimbrial protein) [Cell motility];


:

Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 139.40  E-value: 2.85e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  12 KKIILSMLFSLLFFSLPSHAKNGQIgeiKIRGQLVAEACTVRPGDENIIVDFGTIVNKYLY-INQKTPLENFNIHLDDCD 90
Cdd:COG3539    2 KKLLLALLLALALSAAAAAAADGTV---NFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNgVGSTSGPKPFSIKLTNCD 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  91 NSIFKTVTVKFTGSENTHLPGLLALDSGSMASGIGIEILEYSGKKIPINSSTSAYNL-ENGTNILSFNANVQGEpdaikN 169
Cdd:COG3539   79 AGTSNSVKVTFTGTADSANPGLLANTGSGGASGVGIQLLDSDGTPIPLGTPSSAVTLtSNGSATLPFYARYVAT-----G 153

                        170
                 ....*....|....*....
gi 757601045 170 KSIAFGHFTATAVFSLIYD 188
Cdd:COG3539  154 ATVTAGSFNATATFTIDYQ 172
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
12-188 2.85e-42

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 139.40  E-value: 2.85e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  12 KKIILSMLFSLLFFSLPSHAKNGQIgeiKIRGQLVAEACTVRPGDENIIVDFGTIVNKYLY-INQKTPLENFNIHLDDCD 90
Cdd:COG3539    2 KKLLLALLLALALSAAAAAAADGTV---NFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNgVGSTSGPKPFSIKLTNCD 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  91 NSIFKTVTVKFTGSENTHLPGLLALDSGSMASGIGIEILEYSGKKIPINSSTSAYNL-ENGTNILSFNANVQGEpdaikN 169
Cdd:COG3539   79 AGTSNSVKVTFTGTADSANPGLLANTGSGGASGVGIQLLDSDGTPIPLGTPSSAVTLtSNGSATLPFYARYVAT-----G 153

                        170
                 ....*....|....*....
gi 757601045 170 KSIAFGHFTATAVFSLIYD 188
Cdd:COG3539  154 ATVTAGSFNATATFTIDYQ 172
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 12-188 5.71e-17

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 74.24  E-value: 5.71e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  12 KKIILSmLFSLLFFSLPSHAKNGQIGEIKIRGQLVAEACTVRPGDENIIVDFGTiVNKYLY--INQKTPLENFNIHLDDC 89
Cdd:PRK15209   2 KKVVFA-LSALALTSTSVFAAESGDGTVKFTGEIVDAPCVVSTDSQNQEVVLGQ-VKKSVFkaIGDKSSAKPFQIKLEDC 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  90 DNSIFKTVTVKFTGSENTHLPGLLALDS-GSMASGIGIEILEYSGKKIPINSSTSAYNLENGTNILSFNANVQGEPDAIK 168
Cdd:PRK15209  80 DITTNKKVNVSFNGVGDADDSTLVSVSTeAGAATGVGIGIYDNANTLVELNTGKSTTTLAAGQTVLYFTANYVSTKDTVT 159

                        170       180
                 ....*....|....*....|
gi 757601045 169 NksiafGHFTATAVFSLIYD 188
Cdd:PRK15209 160 T-----GYGNAEVDFNLSYE 174
Fimbrial pfam00419
Fimbrial protein;
39-188 3.43e-12

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 61.30  E-value: 3.43e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045   39 IKIRGQL--VAEACTVRPGDeNIIVDFGTI-VNKYLYINQKTPLENFNIHLDdCDN-SIFKTVTVKFTGSENTHLPGLLA 114
Cdd:pfam00419   1 INFTGTVtrVPATCKITAGT-PIEVDFGQIpVNELNAGGEGSRQKPFSITLE-CSSgSSAVKVTVGLFGTADASSPNLLL 78

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 757601045  115 LDSG-SMASGIGIEILEYSGKKIPINSSTSAYNL---ENGTNILSFNANvqgePDAIKNKSIAFGHFTATAVFSLIYD 188
Cdd:pfam00419  79 TGNGaGAATGVGIRLYDANGGALPPNNGTSSIPVsatAAVATGITFTAS----LVATTGGTPTAGDFNATATIVVDYQ 152
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
12-188 2.85e-42

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 139.40  E-value: 2.85e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  12 KKIILSMLFSLLFFSLPSHAKNGQIgeiKIRGQLVAEACTVRPGDENIIVDFGTIVNKYLY-INQKTPLENFNIHLDDCD 90
Cdd:COG3539    2 KKLLLALLLALALSAAAAAAADGTV---NFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNgVGSTSGPKPFSIKLTNCD 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  91 NSIFKTVTVKFTGSENTHLPGLLALDSGSMASGIGIEILEYSGKKIPINSSTSAYNL-ENGTNILSFNANVQGEpdaikN 169
Cdd:COG3539   79 AGTSNSVKVTFTGTADSANPGLLANTGSGGASGVGIQLLDSDGTPIPLGTPSSAVTLtSNGSATLPFYARYVAT-----G 153

                        170
                 ....*....|....*....
gi 757601045 170 KSIAFGHFTATAVFSLIYD 188
Cdd:COG3539  154 ATVTAGSFNATATFTIDYQ 172
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 12-188 5.71e-17

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 74.24  E-value: 5.71e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  12 KKIILSmLFSLLFFSLPSHAKNGQIGEIKIRGQLVAEACTVRPGDENIIVDFGTiVNKYLY--INQKTPLENFNIHLDDC 89
Cdd:PRK15209   2 KKVVFA-LSALALTSTSVFAAESGDGTVKFTGEIVDAPCVVSTDSQNQEVVLGQ-VKKSVFkaIGDKSSAKPFQIKLEDC 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  90 DNSIFKTVTVKFTGSENTHLPGLLALDS-GSMASGIGIEILEYSGKKIPINSSTSAYNLENGTNILSFNANVQGEPDAIK 168
Cdd:PRK15209  80 DITTNKKVNVSFNGVGDADDSTLVSVSTeAGAATGVGIGIYDNANTLVELNTGKSTTTLAAGQTVLYFTANYVSTKDTVT 159

                        170       180
                 ....*....|....*....|
gi 757601045 169 NksiafGHFTATAVFSLIYD 188
Cdd:PRK15209 160 T-----GYGNAEVDFNLSYE 174
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
13-188 6.11e-17

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 74.61  E-value: 6.11e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  13 KIILSMLFSLLFFSLPSHAKNGQI-----GEIKIRGQLVAEACTVRPGDENIIVDFGTI-VNKYLYINQKTPLENFNIHL 86
Cdd:PRK15194   4 RFISSAIASLLFVAGAAYAADPTPvsvdgGTIHFEGELVNAACSVNTDSADQTVTLGQYrTAIFTAVGNTTALIPFTIQL 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  87 DDCDNSIFKTVTVKFTGSENTHLPGLLALDSGS---MASGIGIEILEYSGKKIPINSST--SAYNLENGTNILSFNANVQ 161
Cdd:PRK15194  84 NDCDPVVAATAAVAFSGQADATNDNLLAVASSTnttTATGVGIEILDNTSSILKPDGATfsANQNLIEGTNTLHFSARYK 163

                        170       180
                 ....*....|....*....|....*..
gi 757601045 162 GepdaiKNKSIAFGHFTATAVFSLIYD 188
Cdd:PRK15194 164 A-----TGTSASAGQANADATFIMKYE 185
PRK15260 PRK15260
fimbrial protein SteF; Provisional
 26-187 1.85e-16

fimbrial protein SteF; Provisional


Pssm-ID: 185168  Cd Length: 178  Bit Score: 73.19  E-value: 1.85e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  26 SLPSHAKNgqigeIKIRGQLVAEACT-VRPGDENIIVDFGTI-VNKYLYINQKTPLEnFNIHLDDCDNSIFKTVTVKFTG 103
Cdd:PRK15260  23 TLPAATPN-----VHYSGKLVAGACNlVVDNDTMATVDFHTIgSDNFDASGQTTPVP-FTLSLQDCKTALANGVLVTFQG 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045 104 SENTHLPGLLALDSGSMASGIGIEILEYSGKKIPINSST-SAYNLENGTNILSFNANVQgepdAIKNKSIAFGHFTATAV 182
Cdd:PRK15260  97 VEDSTLPGLLALEPSSEASGFAIGVETAAQQPVSINATVgTAFVLKEGITTINLQARLQ----KYAGEEVMPGEFSGSAT 172


                 ....*
gi 757601045 183 FSLIY 187
Cdd:PRK15260 173 VSFEY 177
PRK15288 PRK15288
putative minor fimbrial subunit StfG; Provisional
 43-187 1.26e-15

putative minor fimbrial subunit StfG; Provisional


Pssm-ID: 185188 [Multi-domain]  Cd Length: 176  Bit Score: 70.83  E-value: 1.26e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  43 GQLVAEACTVRPGDENII-VDFGTIVNKYLYINQKTPLENFNIHLDDCDNSIFKTVTVKFTGSENTHLPGLLALDSGSMA 121
Cdd:PRK15288  33 GSLVASPCTLTMQGTGIAeVDFSSLDSSDFTPDGQSARKPLVFELTDCDSALSNGVQVTFTGTEATGMRGILAIDSYSGA 112

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 757601045 122 SGIGIEILEYSGKKIPINSSTSA-YNLENGTNILSFNANVQGEPdaikNKSIAFGHFTATAVFSLIY 187
Cdd:PRK15288 113 SGIGIGIETLSGVPVGMNDEEGAiFTLVTGKNTLSLNAWVQRLP----GEDLIPGRFSASALATFEY 175
PRK09934 PRK09934
fimbriae assembly protein;
12-188 1.23e-13

fimbriae assembly protein;


Pssm-ID: 182153 [Multi-domain]  Cd Length: 171  Bit Score: 65.68  E-value: 1.23e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  12 KKIILSMLFSLLFfsLPSHAKNGQIGEIKI--RGQLVAEACTVRPGDENIIVDFGTIVNKYLYI-NQKTPLENFNIHLDD 88
Cdd:PRK09934   2 RRVFFACFCGLLW--SPLSWAADPLGEINIelHGNVVDFTCTVNTADSDKTVDLGTWPTKQLLNaGDTTQPVPFSLKLEG 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  89 CDNSifkTVTVKFTGSEnTHLPGLLALDSGSMASGIGIEILEYSGKKIPINSSTSAYNL-ENGTNILSFNANVQGEPDAI 167
Cdd:PRK09934  80 CPPG---SASITFTGTP-ASDTNLLALDDPAMAQTVAIEIRDSDRSRLALGQASPTVEVdANGNATLNFYANYIALADGV 155

                        170       180
                 ....*....|....*....|.
gi 757601045 168 KNksiafGHFTATAVFSLIYD 188
Cdd:PRK09934 156 QP-----GVAKADATFMINYN 171
PRK15187 PRK15187
fimbrial protein BcfA; Provisional
 12-187 1.45e-13

fimbrial protein BcfA; Provisional


Pssm-ID: 185109  Cd Length: 180  Bit Score: 65.61  E-value: 1.45e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  12 KKIILSMLFSLLFFS-LPSHAKNGQI----GEIKIRGQLVAEACTVRPGDENIIVDFGTIVNKYL-----YINQKtplEN 81
Cdd:PRK15187   2 KKPVLALMVSAIAFGgMLSTAQADTTtvtgGTVNFVGQVVDAACSVSADSVDQTVTLGQVRASKLteagmVANQK---ED 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  82 FNIHLDDCDNSIFKTVTVKFTGSENTHLPGLLALDSGS-MASGIGIEILEYSGKKIPINSSTSAYNLENGTNILSFNAnv 160
Cdd:PRK15187  79 FTIKLEDCDTQTSQNAAVIFNGQQDANQPGSLANTAGAgSATNVALQLYGPDGQALNIGESSSTVTLNDGENVIPLSV-- 156

                        170       180
                 ....*....|....*....|....*..
gi 757601045 161 qgepDAIKNKSIAFGHFTATAVFSLIY 187
Cdd:PRK15187 157 ----DYIATGTATAGNVTATATFSMVY 179
PRK15205 PRK15205
long polar fimbrial protein LpfE; Provisional
 10-188 1.01e-12

long polar fimbrial protein LpfE; Provisional


Pssm-ID: 237923  Cd Length: 176  Bit Score: 63.33  E-value: 1.01e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  10 KFKKIILSMLFSLLFFSLPSHAKN-GQIGEIKIRGQLVAEACTVRPGDenIIVDFGTIVNKY-----LYINQKtpleNFN 83
Cdd:PRK15205   2 KNKRALLPLALLLLTASGMAAPTDlGPAGDIHFTITIKAKACELEKDS--LEVDMGTMVLQKpvkvgTELNQK----NFS 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  84 IHLDDCDNSIFKTVTVKftGSENTHLPGLLALDSGSmASGIGIEILEYSG-KKIPINSSTSAYNLE---NGTNILSFNAN 159
Cdd:PRK15205  76 IGLKDCDGISKASVTMD--GSPDPDDPSLFALDAGG-ATGVALKIKTSKGtQQYPKSTDGTPVEWAingDGTTQLNYIAS 152

                        170       180       190
                 ....*....|....*....|....*....|
gi 757601045 160 -VQGEPDAiknksiAFGHFTATAVFSLIYD 188
Cdd:PRK15205 153 yVPVNADA------TVGTANATVNFSVTYE 176
Fimbrial pfam00419
Fimbrial protein;
39-188 3.43e-12

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 61.30  E-value: 3.43e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045   39 IKIRGQL--VAEACTVRPGDeNIIVDFGTI-VNKYLYINQKTPLENFNIHLDdCDN-SIFKTVTVKFTGSENTHLPGLLA 114
Cdd:pfam00419   1 INFTGTVtrVPATCKITAGT-PIEVDFGQIpVNELNAGGEGSRQKPFSITLE-CSSgSSAVKVTVGLFGTADASSPNLLL 78

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 757601045  115 LDSG-SMASGIGIEILEYSGKKIPINSSTSAYNL---ENGTNILSFNANvqgePDAIKNKSIAFGHFTATAVFSLIYD 188
Cdd:pfam00419  79 TGNGaGAATGVGIRLYDANGGALPPNNGTSSIPVsatAAVATGITFTAS----LVATTGGTPTAGDFNATATIVVDYQ 152
PRK09733 PRK09733
fimbrial-like protein;
11-161 1.83e-11

fimbrial-like protein;


Pssm-ID: 182053  Cd Length: 181  Bit Score: 59.96  E-value: 1.83e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  11 FKKIILSMLFSLLFFSLpSHAKNGQiGEIKIRGQLVAEACTVRPGDENIIVDFGTIVNKYLYINQKTPLENFNIHLDDC- 89
Cdd:PRK09733   2 FKKSLLVAGVAMILSNN-VFADEGH-GIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCm 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  90 ---DNSIFKTVTVKFTGS-----ENTHLPGLLALDSGSmASGIGIEILEYSGKKIPINSS-TSAYNLENGTNILSFNANV 160
Cdd:PRK09733  80 lsqGGTTYSKAKVTFTTAntmtgQSDLLKNTKETEIGG-ATGVGVRILDSQSGEVTLGTPvVITFNNTNSYQELNFKARM 158


                 .
gi 757601045 161 Q 161
Cdd:PRK09733 159 E 159
PRK15191 PRK15191
fimbrial protein BcfF; Provisional
 27-188 1.56e-10

fimbrial protein BcfF; Provisional


Pssm-ID: 185113 [Multi-domain]  Cd Length: 172  Bit Score: 57.03  E-value: 1.56e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  27 LPSHAKNGQIGEIKIRGQLVAEACTVRPGDENIIVDFGTIVNKYLY-INQKTPLENFNIHLDDCdNSIFKTVTVKFTGSE 105
Cdd:PRK15191  13 LAASGVQAHDGRVYVSGTITDNTCSLSPGSENINVAMGAVSQRQFYrAGDGSAWQPFAIDLQNC-GSTASGVTVSFSGAA 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045 106 NTHLPGLLALDSG-SMASGIGIEILEYSGKKIPINSSTSAYNLENG--TNILSFNANVQGEpdaikNKSIAFGHFTATAV 182
Cdd:PRK15191  92 DSRNTDLLALTAGeSDASGIGIALYDQNKTLIPLGQESDVVTLSPGqaSAHLQFYARYLAD-----GGAVTPGDANASAT 166


                 ....*.
gi 757601045 183 FSLIYD 188
Cdd:PRK15191 167 FILAYE 172
PRK15210 PRK15210
fimbrial protein;
13-187 4.56e-10

fimbrial protein;


Pssm-ID: 185132  Cd Length: 194  Bit Score: 56.24  E-value: 4.56e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  13 KIILSM-----LFSLLFFSLPSHAKNGQIGEIKI--RGQLVAEACTVRPGDENIIVDFGTIVNKYLYI-NQKTPLENFNI 84
Cdd:PRK15210   4 KIILAMaaagmMYGASVFAADTTPTAGPFGSGKIlfTGTITNSPCDIAPGDDAITVPFGQISYRKLNTaDATTESKPFTI 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  85 HLDDC---------DNSIFK--TVTVKFTGSENThlPGLLALDSGSmASGIGIEILEYSGKKIpINSST-----SAYNLE 148
Cdd:PRK15210  84 HLQNCafdpnipdtAGSAGKmsKVTVSFSGTANT--SKKAYTTSGS-AQHVGVQLLKSDNTSI-IEPNTpmpdgDAQQLQ 159

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 757601045 149 NGTNILSFNANVQGEPDAIKNksiafGHFTATAVFSLIY 187
Cdd:PRK15210 160 AGNNELNFFARLIALDNGVTP-----GDFNASVTYTLKY 193
PRK15190 PRK15190
fimbrial protein BcfE; Provisional
 39-188 2.90e-08

fimbrial protein BcfE; Provisional


Pssm-ID: 185112  Cd Length: 181  Bit Score: 51.24  E-value: 2.90e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  39 IKIRGQLVAEACTVRPGDENIIVDFGTI-VNKYLYINQKTPLENFNIHLDDCDNSIfKTVTVKFTGSENTHLPGLLAL-D 116
Cdd:PRK15190  30 LEFTGTIVAQTCDIDISSLSQSIDLGQFaVGDFPSTGTTTKFKPFNINLKNCSRGI-AGAKIWFTGEPDPDNPALLAItD 108

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 757601045 117 SGS-----MASGIGIEILEYSGKKIPINSSTS-AYNLENGTNILSFNANVQGepdaiKNKSIAFGHFTATAVFSLIYD 188
Cdd:PRK15190 109 TGMgsgnmLASGVGVEILNDDQDTISINNADSvVYPLKAGRNTLSFYIRYKS-----TRPTVTSGNATAVMYFDMQYE 181
PRK15283 PRK15283
fimbrial major subunit StfA;
29-187 6.15e-07

fimbrial major subunit StfA;


Pssm-ID: 185183  Cd Length: 186  Bit Score: 47.46  E-value: 6.15e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  29 SHAKNGQIGEIKIRGQLVAEACTVRPGDENIIVDFGTIVNKYLYINQKTPLENFNIHLDDCDNSIFKTVTVKFT--GSEN 106
Cdd:PRK15283  21 ANAAGSNTGTVTFTGTIEDSPCSIVVGDEHQTVNLGHIGTGSLMGGKESSKVDFHIGLENCAFTTEKEASTVFSaiGNES 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045 107 THLPGLLAL---DSGSMAsGIGIEILEYSGKKIPINSSTSAYNLENGT-----NILSFNANVQGEPDAiknKSIAFGHFT 178
Cdd:PRK15283 101 SANPGSVALmriGGGEMA-GSSIVIGNHLGSAIKLGDAYSENLTMNGSvaaakQTLNFKAWVKGDSAA---STIDTGEFS 176


                 ....*....
gi 757601045 179 ATAVFSLIY 187
Cdd:PRK15283 177 STVNFTISY 185
PRK15200 PRK15200
type 1 fimbrial protein subunit FimI;
37-145 1.53e-06

type 1 fimbrial protein subunit FimI;


Pssm-ID: 185122  Cd Length: 177  Bit Score: 46.39  E-value: 1.53e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  37 GEIKIRGQLVAEACTVRPGDENIIVDFGTI-VNKYLYINQKTPLE-NFNIHLDDCDNSIFKTVTVKFTG---SENTHLpg 111
Cdd:PRK15200  27 GRVHLRGQLVNGGCAVATESQDLRVLMGQYrTNAFTGPGSFAPVSvPFSLRLISCSAEVWRHVGIAFAGvtpAEDPHV-- 104

                         90       100       110
                 ....*....|....*....|....*....|....
gi 757601045 112 LLALDSGSMASGIGIEILEYSGKKIPINSSTSAY 145
Cdd:PRK15200 105 FLASGEGIGNAGIGLALFDDQQRQIIPNTLPLHY 138
PRK15300 PRK15300
fimbrial protein StiA; Provisional
 16-188 4.56e-06

fimbrial protein StiA; Provisional


Pssm-ID: 185200  Cd Length: 179  Bit Score: 45.09  E-value: 4.56e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  16 LSMLFSLLFFSLPSHAKNGQIGEIKIRGQLVAEACTVRPGDENIIV--DFGTIvnkYLYINQKTPLENFNIHLDDCDNSI 93
Cdd:PRK15300   8 LTVALAAITLSPAALADTAKDGTVHITGLIKQNACTVKTDSVEVTLqeEFASL---FTAAGQTAGDTDFTIELENCDANV 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  94 FKTVTVKFTGSenthLPGLLA--LDSGSMASGIGIEILEYSGKKIPIN---SSTSAYNL--ENGTNILSFNANVQGEPDA 166
Cdd:PRK15300  85 YSSVQARFEGT----LDGTDAtiLKNEDDAENIGVQILDKTSTPMTFNdlqAWSAAVALptAEGVTELSMPFTARYIATA 160

                        170       180
                 ....*....|....*....|..
gi 757601045 167 IKNKSiafGHFTATAVFSLIYD 188
Cdd:PRK15300 161 VPVKS---GTVDATATFYLQYN 179
lpfA PRK15289
fimbrial protein; Provisional
 37-155 7.43e-04

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 38.79  E-value: 7.43e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757601045  37 GEIKIRGQLVAEACTVRPGDENIIVDFGTiVNKYLY--INQKTPLENFNIHLDDCDNSiFKTVTVKFTGSENTHLPGLLA 114
Cdd:PRK15289  26 GVVHFVGEIVDTTCEVTSDTADQIVPLGK-VSKNAFsgVGSLASPQKFSIKLENCPAT-YTQAAVRFDGTEAPGGDGDLK 103

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 757601045 115 ----LDSG-----------SMASGIGIEILEYSGkkipiNSSTSAYNLENGTNILS 155
Cdd:PRK15289 104 vgtpLTAGnpgdftgtgqaIAATGVGIRIFNQSD-----NSQVKLYNDSAYTAIDA 154
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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