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Conserved domains on  [gi|757709120|ref|WP_042938210|]
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MULTISPECIES: hypothetical protein [Klebsiella]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
AgaS super family cl34435
Fructoselysine-6-P-deglycase FrlB or related protein, duplicated sugar isomerase (SIS) domain ...
11-298 3.17e-15

Fructoselysine-6-P-deglycase FrlB or related protein, duplicated sugar isomerase (SIS) domain [Cell wall/membrane/envelope biogenesis];


The actual alignment was detected with superfamily member COG2222:

Pssm-ID: 441824 [Multi-domain]  Cd Length: 336  Bit Score: 75.32  E-value: 3.17e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757709120  11 AQGVAQQGDSLTDTVQRTQAWLNTL--DLEAMRRSALLFAGIGASY--AVLASPVHElRAAGIRA-------FRSNGDDM 79
Cdd:COG2222    1 AREIAQQPEAWRRALAALAAAIAALlaRLRAKPPRRVVLVGAGSSDhaAQAAAYLLE-RLLGIPVaalapseLVVYPAYL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757709120  80 PTGTPVLadwyIGVSQSGRSPEVVRILQ--QQRHGRRLTIVNQARSPLERISGQPLWLGTLIDSSM---SSVALMAtsVS 154
Cdd:COG2222   80 KLEGTLV----VAISRSGNSPEVVAALElaKARGARTLAITNNPDSPLAEAADRVLPLPAGPEKSVaatKSFTTML--LA 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757709120 155 LGLLTDALIGRDETAGWL-TLPQTLAAQRPSADAVIARfvARLNNPGCIDLVGGGSSLSAAEQGALLLREGPKAAAMGMG 233
Cdd:COG2222  154 LLALLAAWGGDDALLAALdALPAALEAALAADWPAAAL--AALADAERVVFLGRGPLYGLAREAALKLKELSAGHAEAYS 231
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 757709120 234 TRHYLHG-MTDAVGSTAHVLIGGEREIL-----LAKQMSAFGVPVLLIT---DTPQSLPGVETL-----ILPSLPPLQR 298
Cdd:COG2222  232 AAEFRHGpKSLVDPGTLVVVLASEDPTReldldLAAELRALGARVVAIGaedDAAITLPAIPDLhdaldPLLLLVVAQR 310
 
Name Accession Description Interval E-value
AgaS COG2222
Fructoselysine-6-P-deglycase FrlB or related protein, duplicated sugar isomerase (SIS) domain ...
11-298 3.17e-15

Fructoselysine-6-P-deglycase FrlB or related protein, duplicated sugar isomerase (SIS) domain [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441824 [Multi-domain]  Cd Length: 336  Bit Score: 75.32  E-value: 3.17e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757709120  11 AQGVAQQGDSLTDTVQRTQAWLNTL--DLEAMRRSALLFAGIGASY--AVLASPVHElRAAGIRA-------FRSNGDDM 79
Cdd:COG2222    1 AREIAQQPEAWRRALAALAAAIAALlaRLRAKPPRRVVLVGAGSSDhaAQAAAYLLE-RLLGIPVaalapseLVVYPAYL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757709120  80 PTGTPVLadwyIGVSQSGRSPEVVRILQ--QQRHGRRLTIVNQARSPLERISGQPLWLGTLIDSSM---SSVALMAtsVS 154
Cdd:COG2222   80 KLEGTLV----VAISRSGNSPEVVAALElaKARGARTLAITNNPDSPLAEAADRVLPLPAGPEKSVaatKSFTTML--LA 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757709120 155 LGLLTDALIGRDETAGWL-TLPQTLAAQRPSADAVIARfvARLNNPGCIDLVGGGSSLSAAEQGALLLREGPKAAAMGMG 233
Cdd:COG2222  154 LLALLAAWGGDDALLAALdALPAALEAALAADWPAAAL--AALADAERVVFLGRGPLYGLAREAALKLKELSAGHAEAYS 231
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 757709120 234 TRHYLHG-MTDAVGSTAHVLIGGEREIL-----LAKQMSAFGVPVLLIT---DTPQSLPGVETL-----ILPSLPPLQR 298
Cdd:COG2222  232 AAEFRHGpKSLVDPGTLVVVLASEDPTReldldLAAELRALGARVVAIGaedDAAITLPAIPDLhdaldPLLLLVVAQR 310
SIS_GlmS_GlmD_1 cd05008
SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and ...
45-158 8.64e-05

SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) contains two SIS domains and catalyzes the deamination and isomerization of glucosamine-6-phosphate into fructose-6-phosphate with the release of ammonia; in presence of high ammonia concentration, GlmD can catalyze the reverse reaction.


Pssm-ID: 240141 [Multi-domain]  Cd Length: 126  Bit Score: 41.71  E-value: 8.64e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757709120  45 LLFAGIGASY--AVLASPVHElRAAGIR-----AFRSNGDDMPTGTPVLAdwyIGVSQSGRSPEVVRILQQ-QRHGRR-L 115
Cdd:cd05008    2 ILIVGCGTSYhaALVAKYLLE-RLAGIPveveaASEFRYRRPLLDEDTLV---IAISQSGETADTLAALRLaKEKGAKtV 77
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 757709120 116 TIVNQARSPLERISGQPLWLGTLIDSSMSSVALMATSVSLGLL 158
Cdd:cd05008   78 AITNVVGSTLAREADYVLYLRAGPEISVAATKAFTSQLLALLL 120
SIS pfam01380
SIS domain; SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and ...
45-127 1.99e-03

SIS domain; SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars. Presumably the SIS domains bind to the end-product of the pathway.


Pssm-ID: 426230 [Multi-domain]  Cd Length: 131  Bit Score: 37.66  E-value: 1.99e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757709120   45 LLFAGIGASYAV----------LASPVHELRAAGirAFRSNGDDMPT-GTPVladwyIGVSQSGRSPEVVRILQQ--QRH 111
Cdd:pfam01380   8 IFVIGRGTSYAIalelalkfeeIGYKVVEVELAS--ELRHGVLALVDeDDLV-----IAISYSGETKDLLAAAELakARG 80
                          90
                  ....*....|....*.
gi 757709120  112 GRRLTIVNQARSPLER 127
Cdd:pfam01380  81 AKIIAITDSPGSPLAR 96
PRK11337 PRK11337
MurR/RpiR family transcriptional regulator;
24-129 4.22e-03

MurR/RpiR family transcriptional regulator;


Pssm-ID: 183089 [Multi-domain]  Cd Length: 292  Bit Score: 38.59  E-value: 4.22e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757709120  24 TVQRTQAWLNTLDLEAMRRSALLFA--------GIGASYAVLASPVHELRAAGIRAfrSNGDD---MPTGTPVLA--DWY 90
Cdd:PRK11337 114 SLQAIEETQSILDVDEFHRAARFFYqarqrdlyGAGGSAAIARDVQHKFLRIGVRC--QAYDDahiMLMSAALLQegDVV 191
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 757709120  91 IGVSQSGRSPEVVRILQ--QQRHGRRLTIVNQARSPLERIS 129
Cdd:PRK11337 192 LVVSHSGRTSDVIEAVElaKKNGAKIICITNSYHSPIAKLA 232
 
Name Accession Description Interval E-value
AgaS COG2222
Fructoselysine-6-P-deglycase FrlB or related protein, duplicated sugar isomerase (SIS) domain ...
11-298 3.17e-15

Fructoselysine-6-P-deglycase FrlB or related protein, duplicated sugar isomerase (SIS) domain [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441824 [Multi-domain]  Cd Length: 336  Bit Score: 75.32  E-value: 3.17e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757709120  11 AQGVAQQGDSLTDTVQRTQAWLNTL--DLEAMRRSALLFAGIGASY--AVLASPVHElRAAGIRA-------FRSNGDDM 79
Cdd:COG2222    1 AREIAQQPEAWRRALAALAAAIAALlaRLRAKPPRRVVLVGAGSSDhaAQAAAYLLE-RLLGIPVaalapseLVVYPAYL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757709120  80 PTGTPVLadwyIGVSQSGRSPEVVRILQ--QQRHGRRLTIVNQARSPLERISGQPLWLGTLIDSSM---SSVALMAtsVS 154
Cdd:COG2222   80 KLEGTLV----VAISRSGNSPEVVAALElaKARGARTLAITNNPDSPLAEAADRVLPLPAGPEKSVaatKSFTTML--LA 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757709120 155 LGLLTDALIGRDETAGWL-TLPQTLAAQRPSADAVIARfvARLNNPGCIDLVGGGSSLSAAEQGALLLREGPKAAAMGMG 233
Cdd:COG2222  154 LLALLAAWGGDDALLAALdALPAALEAALAADWPAAAL--AALADAERVVFLGRGPLYGLAREAALKLKELSAGHAEAYS 231
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 757709120 234 TRHYLHG-MTDAVGSTAHVLIGGEREIL-----LAKQMSAFGVPVLLIT---DTPQSLPGVETL-----ILPSLPPLQR 298
Cdd:COG2222  232 AAEFRHGpKSLVDPGTLVVVLASEDPTReldldLAAELRALGARVVAIGaedDAAITLPAIPDLhdaldPLLLLVVAQR 310
SIS_GlmS_GlmD_1 cd05008
SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and ...
45-158 8.64e-05

SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) contains two SIS domains and catalyzes the deamination and isomerization of glucosamine-6-phosphate into fructose-6-phosphate with the release of ammonia; in presence of high ammonia concentration, GlmD can catalyze the reverse reaction.


Pssm-ID: 240141 [Multi-domain]  Cd Length: 126  Bit Score: 41.71  E-value: 8.64e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757709120  45 LLFAGIGASY--AVLASPVHElRAAGIR-----AFRSNGDDMPTGTPVLAdwyIGVSQSGRSPEVVRILQQ-QRHGRR-L 115
Cdd:cd05008    2 ILIVGCGTSYhaALVAKYLLE-RLAGIPveveaASEFRYRRPLLDEDTLV---IAISQSGETADTLAALRLaKEKGAKtV 77
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 757709120 116 TIVNQARSPLERISGQPLWLGTLIDSSMSSVALMATSVSLGLL 158
Cdd:cd05008   78 AITNVVGSTLAREADYVLYLRAGPEISVAATKAFTSQLLALLL 120
SIS pfam01380
SIS domain; SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and ...
45-127 1.99e-03

SIS domain; SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars. Presumably the SIS domains bind to the end-product of the pathway.


Pssm-ID: 426230 [Multi-domain]  Cd Length: 131  Bit Score: 37.66  E-value: 1.99e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757709120   45 LLFAGIGASYAV----------LASPVHELRAAGirAFRSNGDDMPT-GTPVladwyIGVSQSGRSPEVVRILQQ--QRH 111
Cdd:pfam01380   8 IFVIGRGTSYAIalelalkfeeIGYKVVEVELAS--ELRHGVLALVDeDDLV-----IAISYSGETKDLLAAAELakARG 80
                          90
                  ....*....|....*.
gi 757709120  112 GRRLTIVNQARSPLER 127
Cdd:pfam01380  81 AKIIAITDSPGSPLAR 96
PRK11337 PRK11337
MurR/RpiR family transcriptional regulator;
24-129 4.22e-03

MurR/RpiR family transcriptional regulator;


Pssm-ID: 183089 [Multi-domain]  Cd Length: 292  Bit Score: 38.59  E-value: 4.22e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757709120  24 TVQRTQAWLNTLDLEAMRRSALLFA--------GIGASYAVLASPVHELRAAGIRAfrSNGDD---MPTGTPVLA--DWY 90
Cdd:PRK11337 114 SLQAIEETQSILDVDEFHRAARFFYqarqrdlyGAGGSAAIARDVQHKFLRIGVRC--QAYDDahiMLMSAALLQegDVV 191
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 757709120  91 IGVSQSGRSPEVVRILQ--QQRHGRRLTIVNQARSPLERIS 129
Cdd:PRK11337 192 LVVSHSGRTSDVIEAVElaKKNGAKIICITNSYHSPIAKLA 232
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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