|
Name |
Accession |
Description |
Interval |
E-value |
| NtrY |
COG5000 |
Signal transduction histidine kinase NtrY involved in nitrogen fixation and metabolism ... |
177-522 |
2.65e-67 |
|
Signal transduction histidine kinase NtrY involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms];
Pssm-ID: 444024 [Multi-domain] Cd Length: 422 Bit Score: 223.30 E-value: 2.65e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 177 QLTEHLAEERATtVANLEELNALILQRMRTGILVLDSRHRVLLANQSALGLLAQP--ELAGKLATEHCPELLDSLQQWER 254
Cdd:COG5000 73 RMTDQLKEQREE-LEERRRYLETILENLPAGVIVLDADGRITLANPAAERLLGIPleELIGKPLEELLPELDLAELLREA 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 255 NPSLRPPSLQAPEGGPM-LQPSFIPLRrgeEQHTLVFLEDISQIAQQAqqlKLAALGRLTAGIAHEIRNPLGAISHAAQL 333
Cdd:COG5000 152 LERGWQEEIELTRDGRRtLLVRASPLR---DDGYVIVFDDITELLRAE---RLAAWGELARRIAHEIKNPLTPIQLSAER 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 334 LQESETLDAPD-----RRLTQIIQDQSRRMNLVIENVLQLSRRRQAEPQQLDLRQWLQRFTDEQREGLRGDQ-QIHLQMG 407
Cdd:COG5000 226 LRRKLADKLEEdredlERALDTIIRQVDRLKRIVDEFLDFARLPEPQLEPVDLNELLREVLALYEPALKEKDiRLELDLD 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 408 GGEIQTRMDPSQLTQVLGNLVQNglrysARQ--NGSGQVWLNLFRDRDSdlPVLEVLDDGPGIAPEQLGKLFEPFFTTES 485
Cdd:COG5000 306 PDLPEVLADRDQLEQVLINLLKN-----AIEaiEEGGEIEVSTRREDGR--VRIEVSDNGPGIPEEVLERIFEPFFTTKP 378
|
330 340 350
....*....|....*....|....*....|....*..
gi 759553845 486 KGTGLGLYISRELCESNQARIDFKNRDEGGGSFRITF 522
Cdd:COG5000 379 KGTGLGLAIVKKIVEEHGGTIELESRPGGGTTFTIRL 415
|
|
| NtrB |
COG3852 |
Signal transduction histidine kinase NtrB, nitrogen specific [Signal transduction mechanisms]; |
189-522 |
1.62e-62 |
|
Signal transduction histidine kinase NtrB, nitrogen specific [Signal transduction mechanisms];
Pssm-ID: 443061 [Multi-domain] Cd Length: 361 Bit Score: 208.55 E-value: 1.62e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 189 TVANLEELNALILQRMRTGILVLDSRHRVLLANQSALGLLAQP--ELAGKLATE---HCPELLDSLQQWERNPSLRPP-- 261
Cdd:COG3852 1 ALRESEELLRAILDSLPDAVIVLDADGRITYVNPAAERLLGLSaeELLGRPLAElfpEDSPLRELLERALAEGQPVTEre 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 262 -SLQAPEGGPM-LQPSFIPLR-RGEEQHTLVFLEDISQIAQQAQQL----KLAALGRLTAGIAHEIRNPLGAISHAAQLL 334
Cdd:COG3852 81 vTLRRKDGEERpVDVSVSPLRdAEGEGGVLLVLRDITERKRLERELrraeKLAAVGELAAGLAHEIRNPLTGIRGAAQLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 335 qESETLDAPDRRLTQIIQDQSRRMNLVIENVLQLSRRRQAEPQQLDLRQWLQRFTDEQREGLRGDQQIHLQMGGGEIQTR 414
Cdd:COG3852 161 -ERELPDDELREYTQLIIEEADRLNNLVDRLLSFSRPRPPEREPVNLHEVLERVLELLRAEAPKNIRIVRDYDPSLPEVL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 415 MDPSQLTQVLGNLVQNglrysARQ--NGSGQVWLNLFRDRDSDLP--------VLEVLDDGPGIAPEQLGKLFEPFFTTE 484
Cdd:COG3852 240 GDPDQLIQVLLNLVRN-----AAEamPEGGTITIRTRVERQVTLGglrprlyvRIEVIDNGPGIPEEILDRIFEPFFTTK 314
|
330 340 350
....*....|....*....|....*....|....*...
gi 759553845 485 SKGTGLGLYISRELCESNQARIDFKNRDEGGGSFRITF 522
Cdd:COG3852 315 EKGTGLGLAIVQKIVEQHGGTIEVESEPGKGTTFRIYL 352
|
|
| KdpD |
COG2205 |
K+-sensing histidine kinase KdpD [Signal transduction mechanisms]; |
307-522 |
5.80e-50 |
|
K+-sensing histidine kinase KdpD [Signal transduction mechanisms];
Pssm-ID: 441807 [Multi-domain] Cd Length: 239 Bit Score: 171.63 E-value: 5.80e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 307 AALGRLTAGIAHEIRNPLGAISHAAQLLQESETLDAPDRR-LTQIIQDQSRRMNLVIENVLQLSR----RRQAEPQQLDL 381
Cdd:COG2205 14 RLKSEFLANVSHELRTPLTSILGAAELLLDEEDLSPEERReLLEIIRESAERLLRLIEDLLDLSRlesgKLSLELEPVDL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 382 RQWLQRFTDEQREGLRG-DQQIHLQMGGGEIQTRMDPSQLTQVLGNLVQNGLRYSARQngsGQVWLNLFRDRDSdlPVLE 460
Cdd:COG2205 94 AELLEEAVEELRPLAEEkGIRLELDLPPELPLVYADPELLEQVLANLLDNAIKYSPPG---GTITISARREGDG--VRIS 168
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 759553845 461 VLDDGPGIAPEQLGKLFEPFFTTES----KGTGLGLYISRELCESNQARIDFKNRDEGGGSFRITF 522
Cdd:COG2205 169 VSDNGPGIPEEELERIFERFYRGDNsrgeGGTGLGLAIVKRIVEAHGGTIWVESEPGGGTTFTVTL 234
|
|
| COG4191 |
COG4191 |
Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal ... |
305-522 |
9.34e-50 |
|
Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms];
Pssm-ID: 443345 [Multi-domain] Cd Length: 361 Bit Score: 174.99 E-value: 9.34e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 305 KLAALGRLTAGIAHEIRNPLGAISHAAQLLQE--SETLDAPD-RRLTQIIQDQSRRMNLVIENVLQLSRRRQAEPQQLDL 381
Cdd:COG4191 138 KLAALGELAAGIAHEINNPLAAILGNAELLRRrlEDEPDPEElREALERILEGAERAAEIVRSLRAFSRRDEEEREPVDL 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 382 RQWLQRFTDEQREGLRGDQ-QIHLQMGGGEIQTRMDPSQLTQVLGNLVQNGlRYSARQNGSGQVWLNLFRDRDSdlPVLE 460
Cdd:COG4191 218 NELIDEALELLRPRLKARGiEVELDLPPDLPPVLGDPGQLEQVLLNLLINA-IDAMEEGEGGRITISTRREGDY--VVIS 294
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 759553845 461 VLDDGPGIAPEQLGKLFEPFFTT--ESKGTGLGLYISRELCESNQARIDFKNRDEGGGSFRITF 522
Cdd:COG4191 295 VRDNGPGIPPEVLERIFEPFFTTkpVGKGTGLGLSISYGIVEKHGGRIEVESEPGGGTTFTITL 358
|
|
| BaeS |
COG0642 |
Signal transduction histidine kinase [Signal transduction mechanisms]; |
208-522 |
1.85e-47 |
|
Signal transduction histidine kinase [Signal transduction mechanisms];
Pssm-ID: 440407 [Multi-domain] Cd Length: 328 Bit Score: 167.78 E-value: 1.85e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 208 ILVLDSRHRVLLANQSALGLLAQPELAGKLATEHCPELLDSLQQWERNPSLRPPSLQAPEGGPMLQPSFIPLRRGEEQHT 287
Cdd:COG0642 7 LLVLLLLLLLLLLLALLLLLLLLLLLALLLLLALLLLLLLLLLLLLLLALALLALLLLLLLLLLLLLLLLLLLLLLLLLL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 288 LVFLEDISQIAQQAQQLKLA--ALGRLTAGIAHEIRNPLGAISHAAQLLQEseTLDAPDRRLTQIIQDQSRRMNLVIENV 365
Cdd:COG0642 87 LLLLLLLLLLLALLLLLEEAneAKSRFLANVSHELRTPLTAIRGYLELLLE--ELDEEQREYLETILRSADRLLRLINDL 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 366 LQLSR----RRQAEPQQLDLRQWLQRFTDEQREGLRGDQ-QIHLQMGGGEIQTRMDPSQLTQVLGNLVQNGLRYSARQng 440
Cdd:COG0642 165 LDLSRleagKLELEPEPVDLAELLEEVVELFRPLAEEKGiELELDLPDDLPTVRGDPDRLRQVLLNLLSNAIKYTPEG-- 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 441 sGQVWLNLfrDRDSDLPVLEVLDDGPGIAPEQLGKLFEPFFTTES----KGTGLGLYISRELCESNQARIDFKNRDEGGG 516
Cdd:COG0642 243 -GTVTVSV--RREGDRVRISVEDTGPGIPPEDLERIFEPFFRTDPsrrgGGTGLGLAIVKRIVELHGGTIEVESEPGKGT 319
|
....*.
gi 759553845 517 SFRITF 522
Cdd:COG0642 320 TFTVTL 325
|
|
| PRK11360 |
PRK11360 |
two-component system sensor histidine kinase AtoS; |
187-522 |
1.27e-43 |
|
two-component system sensor histidine kinase AtoS;
Pssm-ID: 236901 [Multi-domain] Cd Length: 607 Bit Score: 163.60 E-value: 1.27e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 187 ATTVANLEELNALILQRMRTGILVLDSRHRVLLANQSA---LGLLAQpELAGKLATEHCPE-------LLDSLQQWERNP 256
Cdd:PRK11360 254 AQALRETRSLNELILESIADGVIAIDRQGKITTMNPAAeviTGLQRH-ELVGKPYSELFPPntpfaspLLDTLEHGTEHV 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 257 SLRPpSLQAPEGGPMLQPSFIPLRRGEEQ--HTLVFLEDISQIAQQAQQL----KLAALGRLTAGIAHEIRNPLGAISHA 330
Cdd:PRK11360 333 DLEI-SFPGRDRTIELSVSTSLLHNTHGEmiGALVIFSDLTERKRLQRRVarqeRLAALGELVAGVAHEIRNPLTAIRGY 411
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 331 AQLLQEsETLDAPDRRLTQIIQDQSRRMNLVIENVLQLSRRRQAEPQQLDLRQWLQR---FTDEQREGLRGDQQIHLQmg 407
Cdd:PRK11360 412 VQIWRQ-QTSDPPSQEYLSVVLREVDRLNKVIDQLLEFSRPRESQWQPVSLNALVEEvlqLFQTAGVQARVDFETELD-- 488
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 408 gGEIQTRM-DPSQLTQVLGNLVQNGlrYSARQNGsGQVWLNLFRDRDSDLpVLEVLDDGPGIAPEQLGKLFEPFFTTESK 486
Cdd:PRK11360 489 -NELPPIWaDPELLKQVLLNILINA--VQAISAR-GKIRIRTWQYSDGQV-AVSIEDNGCGIDPELLKKIFDPFFTTKAK 563
|
330 340 350
....*....|....*....|....*....|....*.
gi 759553845 487 GTGLGLYISRELCESNQARIDFKNRDEGGGSFRITF 522
Cdd:PRK11360 564 GTGLGLALSQRIINAHGGDIEVESEPGVGTTFTLYL 599
|
|
| WalK |
COG5002 |
Sensor histidine kinase WalK [Signal transduction mechanisms]; |
311-522 |
2.36e-43 |
|
Sensor histidine kinase WalK [Signal transduction mechanisms];
Pssm-ID: 444026 [Multi-domain] Cd Length: 390 Bit Score: 158.56 E-value: 2.36e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 311 RLTAGIAHEIRNPLGAISHAAQLLQESETLDAPD-RRLTQIIQDQSRRMNLVIENVLQLSR----RRQAEPQQLDLRQWL 385
Cdd:COG5002 167 EFVANVSHELRTPLTSIRGYLELLLDGAADDPEErREYLEIILEEAERLSRLVNDLLDLSRlesgELKLEKEPVDLAELL 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 386 QRFTDE-QREGLRGDQQIHLQMGGGEIQTRMDPSQLTQVLGNLVQNGLRYSARQngsGQVWLNLFRDRDSdlPVLEVLDD 464
Cdd:COG5002 247 EEVVEElRPLAEEKGIELELDLPEDPLLVLGDPDRLEQVLTNLLDNAIKYTPEG---GTITVSLREEDDQ--VRISVRDT 321
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 759553845 465 GPGIAPEQLGKLFEPFFTT------ESKGTGLGLYISRELCESNQARIDFKNRDEGGGSFRITF 522
Cdd:COG5002 322 GIGIPEEDLPRIFERFYRVdksrsrETGGTGLGLAIVKHIVEAHGGRIWVESEPGKGTTFTITL 385
|
|
| KinC |
COG5807 |
Sporulation sensor histidine kinase C [Cell cycle control, cell division, chromosome ... |
184-524 |
3.47e-38 |
|
Sporulation sensor histidine kinase C [Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms];
Pssm-ID: 444509 [Multi-domain] Cd Length: 358 Bit Score: 143.39 E-value: 3.47e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 184 EERATTVANLEELNALIlQRMRTGILVLDSRHRVLLANQSALGL--LAQPELAGK-LATEHCpeLLDSLQQWERNPSLRP 260
Cdd:COG5807 17 QEFKLTEDSEFKFKQLF-DSILEFVFFIDSKGEILECNDFAEDLygLSQNEYIGKtFVEEKC--ILKDEQLYNKEAFDRI 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 261 PSLQAPEGGPMLQPSF-IPLRRGEEQHTLVFLEDISQIAQQAQQL----KLAALGRLTAGIAHEIRNPLGAISHAAQLLQ 335
Cdd:COG5807 94 EISYLTKNGEFDEIIYpIYYKDGVILGLITVYRDITKRKEAEDKLlrseKLSVAGELAAGIAHEIRNPLTSIKGFLQLLQ 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 336 ESETLDAPDRRLtQIIQDQSRRMNLVIENVLQLSRRRQAEPQQLDLRQWLQRFTDEQREGLR-GDQQIHLQMGGGEIQTR 414
Cdd:COG5807 174 ESREDSEREEYF-NIIISEIDRINTIITELLVLSKPKKFNFKKLNLNDVLEDVIALLSTEAIlKNISIKYDLADDEPVIN 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 415 MDPSQLTQVLGNLVQNGLRYSARqngSGQVWLNLFRDRDSdlPVLEVLDDGPGIAPEQLGKLFEPFFTTESKGTGLGLYI 494
Cdd:COG5807 253 GDKNQLKQVFINLIKNAIEAMET---GGNITIKTYVEGDF--VVISVKDEGIGIPEEVLEKIGEPFFTTKEEGTGLGLSI 327
|
330 340 350
....*....|....*....|....*....|
gi 759553845 495 SRELCESNQARIDFKNRDEGGGSFRITFAH 524
Cdd:COG5807 328 CKKIIEEHNGTIEVESKPGKGTTFTIYLPL 357
|
|
| KinA |
COG5805 |
Sporulation sensor histidine kinase A (Stage II sporulation protein SpoIIF/SpoIIJ) [Cell cycle ... |
178-522 |
5.24e-38 |
|
Sporulation sensor histidine kinase A (Stage II sporulation protein SpoIIF/SpoIIJ) [Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms];
Pssm-ID: 444507 [Multi-domain] Cd Length: 496 Bit Score: 146.03 E-value: 5.24e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 178 LTEHLAEERATTVANlEELNALIlQRMRTGILVLDSRHRVLLANQSALGLLAQP--ELAGKLATEHCP--------ELLD 247
Cdd:COG5805 142 ITKKKKIEEILQEQE-ERLQTLI-ENSPDLICVIDTDGRILFINESIERLFGAPreELIGKNLLELLHpcdkeefkERIE 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 248 SLQQWERNPSLRPPSLQAPEGGPMLQPSFIPLRR--GEEQHTLVFLEDISQIAQQAQQL----KLAALGRLTAGIAHEIR 321
Cdd:COG5805 220 SITEVWQEFIIEREIITKDGRIRYFEAVIVPLIDtdGSVKGILVILRDITEKKEAEELMarseKLSIAGQLAAGIAHEIR 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 322 NPLGAISHAAQLLQESETldaPDRRLTQIIQDQSRRMNLVIENVLQLSRRRQAEPQQLDLRQWLQR-FTDEQREGLRGDQ 400
Cdd:COG5805 300 NPLTSIKGFLQLLQPGIE---DKEEYFDIMLSELDRIESIISEFLALAKPQAVNKEKENINELIQDvVTLLETEAILHNI 376
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 401 QIHLQMGGGEIQTRMDPSQLTQVLGNLVQNGLrySARQNGsGQVWLNLFRDrDSDLpVLEVLDDGPGIAPEQLGKLFEPF 480
Cdd:COG5805 377 QIRLELLDEDPFIYCDENQIKQVFINLIKNAI--EAMPNG-GTITIHTEEE-DNSV-IIRVIDEGIGIPEERLKKLGEPF 451
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 759553845 481 FTTESKGTGLGLYISRELCESNQARIDFKNRDEGGGSFRITF 522
Cdd:COG5805 452 FTTKEKGTGLGLMVSYKIIENHNGTIDIDSKVGKGTTFTITL 493
|
|
| KinE |
COG5809 |
Sporulation sensor histidine kinase E [Cell cycle control, cell division, chromosome ... |
305-522 |
1.18e-36 |
|
Sporulation sensor histidine kinase E [Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms];
Pssm-ID: 444511 [Multi-domain] Cd Length: 489 Bit Score: 142.04 E-value: 1.18e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 305 KLAALGRLTAGIAHEIRNPLGAISHAAQLLQESETLDapDRRLTQIIQDQSRRMNLVIENVLQLSRRRQAEPQQLDLRQW 384
Cdd:COG5809 266 KLSVVGELAAGIAHEIRNPLTSLKGFIQLLKDTIDEE--QKTYLDIMLSELDRIESIISEFLVLAKPQAIKYEPKDLNTL 343
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 385 LQRFTD-EQREGLRGDQQIHLQMGGGEIQTRMDPSQLTQVLGNLVQNGLRysARQNGsGQVWLNLFRDRDSDLpVLEVLD 463
Cdd:COG5809 344 IEEVIPlLQPQALLKNVQIELELEDDIPDILGDENQLKQVFINLLKNAIE--AMPEG-GNITIETKAEDDDKV-VISVTD 419
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 759553845 464 DGPGIAPEQLGKLFEPFFTTESKGTGLGLYISRELCESNQARIDFKNRDEGGGSFRITF 522
Cdd:COG5809 420 EGCGIPEERLKKLGEPFYTTKEKGTGLGLMVSYKIIEEHGGKITVESEVGKGTTFSITL 478
|
|
| KinD |
COG5808 |
Sporulation sensor histidine kinase D [Cell cycle control, cell division, chromosome ... |
305-529 |
2.73e-35 |
|
Sporulation sensor histidine kinase D [Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms];
Pssm-ID: 444510 [Multi-domain] Cd Length: 454 Bit Score: 137.57 E-value: 2.73e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 305 KLAALGRLTAGIAHEIRNPLGAISHAAQLLQEsETLDAPDRRLTQIIQDQSRRMNLVIENVLQLSRRRQAEPQQLDLRQW 384
Cdd:COG5808 237 KLELIGTFAASTAHEIRNPLTSIKGFIQLLQE-KYPELEDQKYFDIIQEEIQRINQIVSEFLVLGKPTAKKLELDDLNEL 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 385 LQRFTDE-QREGLRGDQQIHLQMGGGEIQTRMDPSQLTQVLGNLVQNGLRYSARqngSGQVWLNLFRDRDSdlPVLEVLD 463
Cdd:COG5808 316 IEEILSIiDSEANLKNIRVEKQSLDEPLHIKCDKDRIKQVLLNLIKNAIEAMKE---GGKLTISIENDDEK--AVIEVID 390
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 759553845 464 DGPGIAPEQLGKLFEPFFTTESKGTGLGLYISRELCESNQARIDFKNRDEGGGSFRITFahPRKQS 529
Cdd:COG5808 391 NGEGIPEDIIDEIFEPFVTTKEGGTGLGLSVCKRIVEMHGGEIDIESEEGKGTTFTIRL--PLKKE 454
|
|
| PRK11100 |
PRK11100 |
sensory histidine kinase CreC; Provisional |
317-522 |
5.92e-31 |
|
sensory histidine kinase CreC; Provisional
Pssm-ID: 236846 [Multi-domain] Cd Length: 475 Bit Score: 125.34 E-value: 5.92e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 317 AHEIRNPLGAISHAAQLLQESetLDAPDR-RLTQIIQDQSRRMNLVIENVLQLS----RRRQAEPQQLDLRQWLQRFTDE 391
Cdd:PRK11100 264 THELKSPLAAIRGAAELLQED--PPPEDRaRFTGNILTQSARLQQLIDRLLELArleqRQELEVLEPVALAALLEELVEA 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 392 QREGLRGdQQIHLQMGGGEIQTRMDPSQLTQVLGNLVQNGLRYSARQngsGQVWLNLfrDRDSDLPVLEVLDDGPGIAPE 471
Cdd:PRK11100 342 REAQAAA-KGITLRLRPDDARVLGDPFLLRQALGNLLDNAIDFSPEG---GTITLSA--EVDGEQVALSVEDQGPGIPDY 415
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 759553845 472 QLGKLFEPFFT-----TESKGTGLGLYISRELCESNQARIDFKNRDEGGGSFRITF 522
Cdd:PRK11100 416 ALPRIFERFYSlprpaNGRKSTGLGLAFVREVARLHGGEVTLRNRPEGGVLATLTL 471
|
|
| CitA |
COG3290 |
Sensor histidine kinase DipB regulating citrate/malate metabolism [Signal transduction ... |
113-522 |
6.91e-28 |
|
Sensor histidine kinase DipB regulating citrate/malate metabolism [Signal transduction mechanisms];
Pssm-ID: 442519 [Multi-domain] Cd Length: 389 Bit Score: 115.33 E-value: 6.91e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 113 IANILLRGRIGLLIAAVAAIGMIYLTFYLSLSQpTAINHYVQAGSLGALSFAAALLLQGLARRQQLTEHLAEERATtvan 192
Cdd:COG3290 7 LLLLLLILLILILILLLLLLIILLLILLLVLLL-LLFLLFVIILLLLLLILLLILLLLLLLLLAALLLKLLEEIAR---- 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 193 LEELNALILQRMRTGILVLDSRHRVLLANQSALGLLAQpELAGKLATEHCPELLDSLQQWErnpslrppslQAPEGGPML 272
Cdd:COG3290 82 LVEEREAVLESIREGVIAVDRDGRITLINDAARRLLGL-DAIGRPIDEVLAEVLETGERDE----------EILLNGRVL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 273 QPSFIPLRR-GEEQHTLVFLEDISQIAQQAQQLKLA-ALGRLTAGIAHEIRNPLGAISHAAQLLQESETLDapdrRLTQI 350
Cdd:COG3290 151 VVNRVPIRDdGRVVGAVATFRDRTELERLEEELEGVkELAEALRAQRHDFRNHLHTISGLLQLGEYDEALE----YIDEI 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 351 IQDQSRRMNLVIENV-------LQLSRRRQAEPQQLDLRqwlqrftdeqregLRGDQQIHlqmgggeiQTRMDPSQLTQV 423
Cdd:COG3290 227 SEELQELIDSLLSRIgnpvlaaLLLGKAARARERGIDLT-------------IDIDSDLP--------DLPLSDTDLVTI 285
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 424 LGNLVQNGLRYSARQNGS-GQVWLNLfRDRDSDLpVLEVLDDGPGIAPEQLGKLFEPFFTT-ESKGTGLGLYISRELCES 501
Cdd:COG3290 286 LGNLLDNAIEAVEKLPEEeRRVELSI-RDDGDEL-VIEVEDSGPGIPEELLEKIFERGFSTkLGEGRGLGLALVKQIVEK 363
|
410 420
....*....|....*....|.
gi 759553845 502 NQARIDFKNRDEGGGSFRITF 522
Cdd:COG3290 364 YGGTIEVESEEGEGTVFTVRL 384
|
|
| COG4251 |
COG4251 |
Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal ... |
59-522 |
9.12e-27 |
|
Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms];
Pssm-ID: 443393 [Multi-domain] Cd Length: 503 Bit Score: 113.73 E-value: 9.12e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 59 LIVNILIAVLMPTPRQLLPIFLLALFDILALCGLFYAAGGVPSGIGNLLVVAVGIANILLRGRIGLLIAAVAAIGMIYLT 138
Cdd:COG4251 23 LLLLVLLLALALLLLLALLVLLLLLIRLLLLLLLSLLALLLLLLLLLLLLLVLAALALLLLLLLLELALVLLALLLVLLL 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 139 FYLSLSQPTAINHYVQAGSLGALSFAAALLLQGLARRQQLTEHLAEERATTVANLEELNALILQRMRTGILVLDSRHRVL 218
Cdd:COG4251 103 LLALLLLLALLLLLELLLLLLALLLLLLLLALLLLEELALLRLALALLLLLLLLLLLLLLLLALILALLLAALAELELLL 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 219 LANQSALGLLAQPELAGKLATEHCPELLDSLQQWERNPSLRPPSLQAPEGGPMLQPSFIPLRRGEEQHTLVFLEDISQIA 298
Cdd:COG4251 183 LLLLVLLLLLLLLLLLLLLLLRLLLELLLLLEAELLLSLGGGLGLLLLLLLLLVLLLLLILLLLLLILVLELLELRLELE 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 299 QQAQQLKLAA---------LGRLTAGIAHEIRNPLGAISHAAQLLQE--SETLDAPDRRLTQIIQDQSRRMNLVIENVLQ 367
Cdd:COG4251 263 ELEEELEERTaelersneeLEQFAYVASHDLREPLRKISGFSQLLEEdyGDKLDEEGREYLERIRDAAERMQALIDDLLA 342
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 368 LSR--RRQAEPQQLDLRQWLQRFTDEQREGLRgDQQIHLQMGGG-EIQTrmDPSQLTQVLGNLVQNGLRYSaRQNGSGQV 444
Cdd:COG4251 343 YSRvgRQELEFEPVDLNELLEEVLEDLEPRIE-ERGAEIEVGPLpTVRG--DPTLLRQVFQNLISNAIKYS-RPGEPPRI 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 445 WLnlFRDRDSDLPVLEVLDDGPGIAPEQLGKLFEPFFT----TESKGTGLGLYISRELCESNQARIDFKNRDEGGGSFRI 520
Cdd:COG4251 419 EI--GAEREGGEWVFSVRDNGIGIDPEYAEKIFEIFQRlhsrDEYEGTGIGLAIVKKIVERHGGRIWVESEPGEGATFYF 496
|
..
gi 759553845 521 TF 522
Cdd:COG4251 497 TL 498
|
|
| HATPase_c |
smart00387 |
Histidine kinase-like ATPases; Histidine kinase-, DNA gyrase B-, phytochrome-like ATPases. |
415-522 |
5.79e-26 |
|
Histidine kinase-like ATPases; Histidine kinase-, DNA gyrase B-, phytochrome-like ATPases.
Pssm-ID: 214643 [Multi-domain] Cd Length: 111 Bit Score: 101.96 E-value: 5.79e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 415 MDPSQLTQVLGNLVQNGLRYSARQngsGQVWLNLFRDRDsDLpVLEVLDDGPGIAPEQLGKLFEPFFTT-----ESKGTG 489
Cdd:smart00387 1 GDPDRLRQVLSNLLDNAIKYTPEG---GRITVTLERDGD-HV-EITVEDNGPGIPPEDLEKIFEPFFRTdkrsrKIGGTG 75
|
90 100 110
....*....|....*....|....*....|...
gi 759553845 490 LGLYISRELCESNQARIDFKNRDEGGGSFRITF 522
Cdd:smart00387 76 LGLSIVKKLVELHGGEISVESEPGGGTTFTITL 108
|
|
| KinB |
COG5806 |
Sporulation sensor histidine kinase B [Cell cycle control, cell division, chromosome ... |
305-522 |
1.01e-24 |
|
Sporulation sensor histidine kinase B [Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms];
Pssm-ID: 444508 [Multi-domain] Cd Length: 412 Bit Score: 106.49 E-value: 1.01e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 305 KLAALGRLTAGIAHEIRNPLGAISHAAQLLQESETLDAPDRRLTQIIQDQSRRMNLVIENVLQLSRrrqaePQQldlrqw 384
Cdd:COG5806 197 KLEVVSELAASIAHEVRNPLTVVRGFIQLLQEPELSDEKRKQYIRIALEELDRAEAIITDYLTFAK-----PQP------ 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 385 lqrftdEQREGLRGDQQIH-----LQ----MGGGEIQTRM--------DPSQLTQVLGNLVQNGLRysARQNGsGQVWLN 447
Cdd:COG5806 266 ------EKLEKIDVSEELEhvidvLSpyanMNNVEIQTELepglyiegDRQKLQQCLINIIKNGIE--AMPNG-GTLTID 336
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 759553845 448 LFRDRDSdlPVLEVLDDGPGIAPEQLGKLFEPFFTTESKGTGLGLYISRELCESNQARIDFKNRDEGGGSFRITF 522
Cdd:COG5806 337 VSIDKNK--VIISIKDTGVGMTKEQLERLGEPYFSTKEKGTGLGTMVSYRIIEAMNGTIRVESEVGKGTTFTITL 409
|
|
| PRK10364 |
PRK10364 |
two-component system sensor histidine kinase ZraS; |
305-520 |
7.52e-24 |
|
two-component system sensor histidine kinase ZraS;
Pssm-ID: 236674 [Multi-domain] Cd Length: 457 Bit Score: 104.48 E-value: 7.52e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 305 KLAALGRLTAGIAHEIRNPLGAISHAAQLLQESETLDAPDRRLTQIIQDQSRRMNLVIENVLQLSRRRQAEPQQLDLRQW 384
Cdd:PRK10364 233 KLVALGHLAAGVAHEIRNPLSSIKGLAKYFAERAPAGGEAHQLAQVMAKEADRLNRVVSELLELVKPTHLALQAVDLNDL 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 385 LQRF-----TDEQREGLrgdqQIHLQMGGGEIQTRMDPSQLTQVLGNLVQNGLRYSARQNGsgqvwLNLFRDRDSDLPVL 459
Cdd:PRK10364 313 INHSlqlvsQDANSREI----QLRFTANDTLPEIQADPDRLTQVLLNLYLNAIQAIGQHGV-----ISVTASESGAGVKI 383
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 759553845 460 EVLDDGPGIAPEQLGKLFEPFFTTESKGTGLGLYISRELCESNQARIDFKNRDEGGGSFRI 520
Cdd:PRK10364 384 SVTDSGKGIAADQLEAIFTPYFTTKAEGTGLGLAVVHNIVEQHGGTIQVASQEGKGATFTL 444
|
|
| HATPase_c |
pfam02518 |
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; This family represents the ... |
415-522 |
1.97e-22 |
|
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; This family represents the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90.
Pssm-ID: 460579 [Multi-domain] Cd Length: 109 Bit Score: 92.05 E-value: 1.97e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 415 MDPSQLTQVLGNLVQNGLRYSArqnGSGQVWLNLfrDRDSDLpVLEVLDDGPGIAPEQLGKLFEPFFT---TESKGTGLG 491
Cdd:pfam02518 1 GDELRLRQVLSNLLDNALKHAA---KAGEITVTL--SEGGEL-TLTVEDNGIGIPPEDLPRIFEPFSTadkRGGGGTGLG 74
|
90 100 110
....*....|....*....|....*....|.
gi 759553845 492 LYISRELCESNQARIDFKNRDEGGGSFRITF 522
Cdd:pfam02518 75 LSIVRKLVELLGGTITVESEPGGGTTVTLTL 105
|
|
| envZ |
PRK09467 |
osmolarity sensor protein; Provisional |
312-526 |
8.08e-22 |
|
osmolarity sensor protein; Provisional
Pssm-ID: 236531 [Multi-domain] Cd Length: 435 Bit Score: 98.06 E-value: 8.08e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 312 LTAGIAHEIRNPLGAISHAAQLLQESetldapDRRLTQIIQDQSRRMNLVIENVLQLSRRRQAEP-QQLDLRQWLQRFTd 390
Cdd:PRK09467 232 LMAGVSHDLRTPLTRIRLATEMMSEE------DGYLAESINKDIEECNAIIEQFIDYLRTGQEMPmEMADLNALLGEVI- 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 391 eQREGLRgDQQIHLQMGGGEIQTRMDPSQLTQVLGNLVQNGLRYsarqnGSGqvWLNLFRDRDSDLPVLEVLDDGPGIAP 470
Cdd:PRK09467 305 -AAESGY-EREIETALQPGPIEVPMNPIAIKRALANLVVNAARY-----GNG--WIKVSSGTEGKRAWFQVEDDGPGIPP 375
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 471 EQLGKLFEPFFTTE----SKGTGLGLYISRELCESNQARIDFKNRDEGGGSFRITFAHPR 526
Cdd:PRK09467 376 EQLKHLFQPFTRGDsargSSGTGLGLAIVKRIVDQHNGKVELGNSEEGGLSARAWLPLTT 435
|
|
| PRK13837 |
PRK13837 |
two-component system VirA-like sensor kinase; |
305-520 |
2.27e-21 |
|
two-component system VirA-like sensor kinase;
Pssm-ID: 237526 [Multi-domain] Cd Length: 828 Bit Score: 98.21 E-value: 2.27e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 305 KLAALGRLTAGIAHEIRNPLGAISHAAQLLQESETLDAPDRRLTQIIQDQSRRMNLVIENVLQLSRRRQAEPQQLDLRQW 384
Cdd:PRK13837 446 RLEAVGTLASGIAHNFNNILGAILGYAEMALNKLARHSRAARYIDEIISAGARARLIIDQILAFGRKGERNTKPFDLSEL 525
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 385 LQRFTDEQREGLRGDQQIHLQMGGGEIQTRMDPSQLTQVLGNLVQNglrysARQ--NGSGQVWLNLFRdrdSDLP----- 457
Cdd:PRK13837 526 VTEIAPLLRVSLPPGVELDFDQDQEPAVVEGNPAELQQVLMNLCSN-----AAQamDGAGRVDISLSR---AKLRapkvl 597
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 759553845 458 -----------VLEVLDDGPGIAPEQLGKLFEPFFTTESKGTGLGLYISRELCESNQARIDFKNRDEGGGSFRI 520
Cdd:PRK13837 598 shgvlppgryvLLRVSDTGAGIDEAVLPHIFEPFFTTRAGGTGLGLATVHGIVSAHAGYIDVQSTVGRGTRFDV 671
|
|
| glnL |
PRK11073 |
nitrogen regulation protein NR(II); |
196-508 |
4.31e-21 |
|
nitrogen regulation protein NR(II);
Pssm-ID: 182947 [Multi-domain] Cd Length: 348 Bit Score: 94.76 E-value: 4.31e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 196 LNALILQRMRTGILVLDSRHRVLLANQSALGLLAQPelAGKLATEHCPELLDSLQQwerNPSLRPPSLQAPEG------- 268
Cdd:PRK11073 8 DAGQILNSLINSILLLDDDLAIHYANPAAQQLLAQS--SRKLFGTPLPELLSYFSL---NIELMRESLQAGQGftdnevt 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 269 ------GPMLQPSFIPLrrgEEQHTLVFLEDISQIAQQAQQL----KLAALGRLTAGIAHEIRNPLGAISHAAQLLQESe 338
Cdd:PRK11073 83 lvidgrSHILSLTAQRL---PEGMILLEMAPMDNQRRLSQEQlqhaQQVAARDLVRGLAHEIKNPLGGLRGAAQLLSKA- 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 339 tldAPDRRL---TQIIQDQSRRmnlvienvlqlsrrrqaepqqldLRQWLQRFTDEQREGLRGDQQIH-----------L 404
Cdd:PRK11073 159 ---LPDPALteyTKVIIEQADR-----------------------LRNLVDRLLGPQRPGTHVTESIHkvaervvqlvsL 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 405 QMGGGEIQTR----------MDPSQLTQVLGNLVQNGLRYSARQNGSGQV------WLNLFRDRDSDLPVLEVLDDGPGI 468
Cdd:PRK11073 213 ELPDNVRLIRdydpslpelaHDPDQIEQVLLNIVRNALQALGPEGGTITLrtrtafQLTLHGERYRLAARIDIEDNGPGI 292
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 759553845 469 APEQLGKLFEPFFTTESKGTGLGLYISRELCESNQARIDF 508
Cdd:PRK11073 293 PPHLQDTLFYPMVSGREGGTGLGLSIARNLIDQHSGKIEF 332
|
|
| HATPase_NtrY-like |
cd16944 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
416-522 |
1.28e-20 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Azorhizobium caulinodans NtrY; This family includes the histidine kinase-like ATPase (HATPase) domains of various histidine kinases (HKs) of two-component signal transduction systems (TCSs) such as Azorhizobium caulinodans ORS571 NtrY of the NtrY-NtrX TCS, which is involved in nitrogen fixation and metabolism. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA) and a HAMP sensor domain; some also have PAS sensor domains.
Pssm-ID: 340420 [Multi-domain] Cd Length: 108 Bit Score: 86.82 E-value: 1.28e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 416 DPSQLTQVLGNLVQNGLR-YSARQNGSGQVWLNLFRDRDSDLpVLEVLDDGPGIAPEQLGKLFEPFFTTESKGTGLGLYI 494
Cdd:cd16944 1 DTTQISQVLTNILKNAAEaIEGRPSDVGEVRIRVEADQDGRI-VLIVCDNGKGFPREMRHRATEPYVTTRPKGTGLGLAI 79
|
90 100
....*....|....*....|....*...
gi 759553845 495 SRELCESNQARIDFKNRDEGGGSFRITF 522
Cdd:cd16944 80 VKKIMEEHGGRISLSNREAGGACIRIIL 107
|
|
| HATPase_TmoS-FixL-DctS-like |
cd16920 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
420-521 |
2.16e-20 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Rhizobium meliloti FixL, and Rhodobacter capsulatus DctS; includes hybrid sensor histidine kinase similar to Pseudomonas mendocina TmoS; This family includes the histidine kinase-like ATPase (HATPase) domains of various histidine kinases (HKs) of two-component signal transduction systems (TCSs), such as Pseudomonas mendocina TmoS HK of the TmoS-TmoT TCS, which controls the expression of the toluene-4-monooxygenase pathway, Rhizobium meliloti FixL HK of the FixL-FixJ TCS, which regulates the expression of the genes related to nitrogen fixation in the root nodule in response to O(2) levels, and Rhodobacter capsulatus DctS of the DctS-DctR TCS, which controls synthesis of the high-affinity C4-dicarboxylate transport system. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA) and PAS sensor domain(s); many are hybrid sensor histidine kinases as they also contain a REC signal receiver domain.
Pssm-ID: 340397 [Multi-domain] Cd Length: 104 Bit Score: 86.30 E-value: 2.16e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 420 LTQVLGNLVQNGLRYSARQNGSGQVWLNLFRDRDSDLPVLEVLDDGPGIAPEQLGKLFEPFFTTESKGTGLGLYISRELC 499
Cdd:cd16920 1 IQQVLINLVRNGIEAMSEGGCERRELTIRTSPADDRAVTISVKDTGPGIAEEVAGQLFDPFYTTKSEGLGMGLSICRSII 80
|
90 100
....*....|....*....|..
gi 759553845 500 ESNQARIDFKNRDEGGGSFRIT 521
Cdd:cd16920 81 EAHGGRLSVESPAGGGATFQFT 102
|
|
| PRK10604 |
PRK10604 |
sensor protein RstB; Provisional |
312-519 |
3.99e-20 |
|
sensor protein RstB; Provisional
Pssm-ID: 236724 [Multi-domain] Cd Length: 433 Bit Score: 92.74 E-value: 3.99e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 312 LTAGIAHEIRNPLgaishaAQLLQESETLDAPDRRLTQIIQDQSRRMNLVIENVLQLSR--RRQAE--PQQLDLRQWLQR 387
Cdd:PRK10604 215 LIDGIAHELRTPL------VRLRYRLEMSDNLSAAESQALNRDIGQLEALIEELLTYARldRPQNElhLSEPDLPAWLST 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 388 FTDEQREgLRGDQQIHLQMGGGEIQTRMDPSQLTQVLGNLVQNGLRYSArqngsGQVWLNLfrDRDSDLPVLEVLDDGPG 467
Cdd:PRK10604 289 HLADIQA-VTPEKTVRLDTPHQGDYGALDMRLMERVLDNLLNNALRYAH-----SRVRVSL--LLDGNQACLIVEDDGPG 360
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 759553845 468 IAPEQLGKLFEPFFTTE------SKGTGLGLYISRELCESNQARIDFKNRDEGGGSFR 519
Cdd:PRK10604 361 IPPEERERVFEPFVRLDpsrdraTGGCGLGLAIVHSIALAMGGSVNCDESELGGARFS 418
|
|
| HATPase_AtoS-like |
cd16943 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
417-524 |
1.42e-17 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli K-12 AtoS; This family includes the histidine kinase-like ATPase (HATPase) domains of various histidine kinases (HKs) of two-component signal transduction systems (TCSs) such as Escherichia coli AtoS, an HK of the AtoS-AtoC TCS. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA); some have accessory domains such as HAMP or PAS sensor domains or CBS-pair domains.
Pssm-ID: 340419 [Multi-domain] Cd Length: 105 Bit Score: 78.23 E-value: 1.42e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 417 PSQLTQVLGNLVQNGlrySARQNGSGQVWLNLFRDRDSDLpvLEVLDDGPGIAPEQLGKLFEPFFTTE--SKGTGLGLYI 494
Cdd:cd16943 1 PSQLNQVLLNLLVNA---AQAMEGRGRITIRTWAHVDQVL--IEVEDTGSGIDPEILGRIFDPFFTTKpvGEGTGLGLSL 75
|
90 100 110
....*....|....*....|....*....|
gi 759553845 495 SRELCESNQARIDFKNRDEGGGSFRITFAH 524
Cdd:cd16943 76 SYRIIQKHGGTIRVASVPGGGTRFTIILPI 105
|
|
| HATPase_EnvZ-like |
cd16950 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
420-520 |
6.54e-17 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli EnvZ and Pseudomonas aeruginosa BfmS; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Escherichia coli EnvZ of the EnvZ-OmpR two-component regulatory system (TCS), which functions in osmoregulation. It also contains the HATPase domain of Pseudomonas aeruginosa BfmS, the HK of the BfmSR TCS, which functions in the regulation of the rhl quorum-sensing system and bacterial virulence in P. aeruginosa. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA) and a HAMP sensor domain; some also contain a periplasmic domain.
Pssm-ID: 340426 [Multi-domain] Cd Length: 101 Bit Score: 76.33 E-value: 6.54e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 420 LTQVLGNLVQNGLRYsarqngsGQVWLNLFRDRDSDLPVLEVLDDGPGIAPEQLGKLFEPFFTTES----KGTGLGLYIS 495
Cdd:cd16950 1 LKRVLSNLVDNALRY-------GGGWVEVSSDGEGNRTRIQVLDNGPGIAPEEVDELFQPFYRGDNargtSGTGLGLAIV 73
|
90 100
....*....|....*....|....*
gi 759553845 496 RELCESNQARIDFKNRDEGGGSFRI 520
Cdd:cd16950 74 QRISDAHGGSLTLANRAGGGLCARI 98
|
|
| HATPase_HupT_MifS-like |
cd16976 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
420-520 |
1.47e-16 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Rhodobacter capsulatus HupT and Pseudomonas aeruginosa MifS; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Rhodobacter capsulatus HupT of the HupT-HupR two-component regulatory system (TCS), which regulates the synthesis of HupSL, a membrane bound [NiFe]hydrogenase. It also contains the HATPase domain of Pseudomonas aeruginosa MifS, the HK of the MifS-MifR TCS, which may be involved in sensing alpha-ketoglutarate and regulating its transport and subsequent metabolism. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA); some also have a C-terminal PAS sensor domain.
Pssm-ID: 340435 [Multi-domain] Cd Length: 102 Bit Score: 75.19 E-value: 1.47e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 420 LTQVLGNLVQNGLRYSA-RQNGsgqvWLNLFRDRDSDLPVLEVLDDGPGIAPEQLGKLFEPFFTTE--SKGTGLGLYISR 496
Cdd:cd16976 1 IQQVLMNLLQNALDAMGkVENP----RIRIAARRLGGRLVLVVRDNGPGIAEEHLSRVFDPFFTTKpvGKGTGLGLSISY 76
|
90 100
....*....|....*....|....
gi 759553845 497 ELCESNQARIDFKNRDEGGGSFRI 520
Cdd:cd16976 77 GIVEEHGGRLSVANEEGAGARFTF 100
|
|
| HATPase_EvgS-ArcB-TorS-like |
cd16922 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases, many are hybrid ... |
420-500 |
4.69e-16 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases, many are hybrid sensor histidine kinases, similar to Escherichia coli EvgS, ArcB, TorS, BarA, RcsC; This family contains the histidine kinase-like ATPase (HATPase) domains of various two-component hybrid sensor histidine kinases (HKs), including the following Escherichia coli HKs: EvgS, a HK of the EvgS-EvgA two-component system (TCS) that confers acid resistance; ArcB, a HK of the ArcB-ArcA TCS that modulates the expression of numerous genes in response to respiratory growth conditions; TorS, a HK of the TorS-TorR TCS which is involved in the anaerobic utilization of trimethylamine-N-oxide; BarA, a HK of the BarA-UvrY TCS involved in the regulation of carbon metabolism; and RcsC, a HK of the RcsB-RcsC TCS which regulates the expression of the capsule operon and of the cell division gene ftsZ. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA), with most having accessory sensor domain(s) such as GAF, PAS and CHASE; many are hybrid sensor histidine kinases as they also contain a REC signal receiver domain.
Pssm-ID: 340399 [Multi-domain] Cd Length: 110 Bit Score: 74.07 E-value: 4.69e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 420 LTQVLGNLVQNGLRYSARqngsGQVWLNLFRDRDSDLPVL---EVLDDGPGIAPEQLGKLFEPFFTTES------KGTGL 490
Cdd:cd16922 1 LRQILLNLLGNAIKFTEE----GEVTLRVSLEEEEEDGVQlrfSVEDTGIGIPEEQQARLFEPFSQADSsttrkyGGTGL 76
|
90
....*....|
gi 759553845 491 GLYISRELCE 500
Cdd:cd16922 77 GLAISKKLVE 86
|
|
| PRK13557 |
PRK13557 |
histidine kinase; Provisional |
305-492 |
6.13e-16 |
|
histidine kinase; Provisional
Pssm-ID: 237425 [Multi-domain] Cd Length: 540 Bit Score: 80.49 E-value: 6.13e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 305 KLAALGRLTAGIAHEIRNPLGAISHAAQLLQ---ESETLDAPD-RRLTQIIQDQSRRMNLVIENVLQLSRRRQAEPQQLD 380
Cdd:PRK13557 159 KMEALGQLTGGIAHDFNNLLQVMSGYLDVIQaalSHPDADRGRmARSVENIRAAAERAATLTQQLLAFARKQRLEGRVLN 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 381 LRQWLQRFTDEQREGLRGDQQIHLQMGGGEIQTRMDPSQLTQVLGNLVQNglrysARQ--NGSGQVWLN----LFRDRD- 453
Cdd:PRK13557 239 LNGLVSGMGELAERTLGDAVTIETDLAPDLWNCRIDPTQAEVALLNVLIN-----ARDamPEGGRVTIRtrnvEIEDEDl 313
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 759553845 454 ---SDLP-----VLEVLDDGPGIAPEQLGKLFEPFFTT--ESKGTGLGL 492
Cdd:PRK13557 314 amyHGLPpgryvSIAVTDTGSGMPPEILARVMDPFFTTkeEGKGTGLGL 362
|
|
| HATPase_CpxA-like |
cd16949 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
420-521 |
1.57e-15 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli CpxA; This family includes the histidine kinase-like ATPase (HATPase) domains of two-component sensor histidine kinase (HKs) similar to Escherichia coli CpxA, HK of the CpxA-CpxR two-component regulatory system (TCS) which may function in acid stress and in cell wall stability. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA) and a HAMP sensor domain; some also contain a CpxA family periplasmic domain.
Pssm-ID: 340425 [Multi-domain] Cd Length: 104 Bit Score: 72.36 E-value: 1.57e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 420 LTQVLGNLVQNGLRYSarqngSGQVWLNLfrDRDSDLPVLEVLDDGPGIAPEQLGKLFEPFF------TTESKGTGLGLY 493
Cdd:cd16949 1 LARALENVLRNALRYS-----PSKILLDI--SQDGDQWTITITDDGPGVPEDQLEQIFLPFYrvdsarDRESGGTGLGLA 73
|
90 100
....*....|....*....|....*...
gi 759553845 494 ISRELCESNQARIDFKNRDEGGGSFRIT 521
Cdd:cd16949 74 IAERAIEQHGGKIKASNRKPGGLRVRIW 101
|
|
| PRK10337 |
PRK10337 |
sensor protein QseC; Provisional |
311-515 |
1.92e-15 |
|
sensor protein QseC; Provisional
Pssm-ID: 182388 [Multi-domain] Cd Length: 449 Bit Score: 78.54 E-value: 1.92e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 311 RLTAGIAHEIRNPLGAI---SHAAQLLQESETldAPDRRLTQIIQDQSRRMNLViENVLQLSR----RRQAEPQQLDLRQ 383
Cdd:PRK10337 239 RFTSDAAHELRSPLAALkvqTEVAQLSDDDPQ--ARKKALLQLHAGIDRATRLV-DQLLTLSRldslDNLQDVAEIPLED 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 384 WLQR-FTDEQREGLRGDQQIHLQMGGGEIQTRMDPSQLTQVLGNLVQNGLRYSARqngSGQVWLNLFRDRdsdlpvLEVL 462
Cdd:PRK10337 316 LLQSaVMDIYHTAQQAGIDVRLTLNAHPVIRTGQPLLLSLLVRNLLDNAIRYSPQ---GSVVDVTLNARN------FTVR 386
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 759553845 463 DDGPGIAPEQLGKLFEPFFT---TESKGTGLGLYISRELCESNQARIDFKNRDEGG 515
Cdd:PRK10337 387 DNGPGVTPEALARIGERFYRppgQEATGSGLGLSIVRRIAKLHGMNVSFGNAPEGG 442
|
|
| HATPase_BceS-YxdK-YvcQ-like |
cd16948 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
423-523 |
7.91e-15 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Bacillus subtilis BceS, YxdK, and Bacillus thuringiensis YvcQ; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Bacillus subtilis BceS and Bacillus thuringiensis YvcQ, the HKs of the two-component regulatory system (TCSs) BceS-BceR and YvcQ-YvcP, repsectively, which are both involved in regulating bacitracin resistance. It also includes the HATPase domain of YxdK, the HK of YxdK-YxdJ TCS involved in sensing antimicrobial compounds.
Pssm-ID: 340424 [Multi-domain] Cd Length: 109 Bit Score: 70.39 E-value: 7.91e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 423 VLGNLVQNGLRYSARqngSGQVWLNLFRDRDSdlPVLEVLDDGPGIAPEQLGKLFEPFFT-----TESKGTGLGLYISRE 497
Cdd:cd16948 9 IIGQIVSNALKYSKQ---GGKIEIYSETNEQG--VVLSIKDFGIGIPEEDLPRVFDKGFTgengrNFQESTGMGLYLVKK 83
|
90 100
....*....|....*....|....*.
gi 759553845 498 LCESNQARIDFKNRDEGGGSFRITFA 523
Cdd:cd16948 84 LCDKLGHKIDVESEVGEGTTFTITFP 109
|
|
| HisKA |
cd00082 |
Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed ... |
306-370 |
9.71e-15 |
|
Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-autophosphorylation by the catalytic domain of the histidine kinase. They subsequently transfer the phosphoryl group to the Asp acceptor residue of a response regulator protein. Two-component signalling systems, consisting of a histidine protein kinase that senses a signal input and a response regulator that mediates the output, are ancient and evolutionarily conserved signaling mechanisms in prokaryotes and eukaryotes.
Pssm-ID: 119399 [Multi-domain] Cd Length: 65 Bit Score: 68.78 E-value: 9.71e-15
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 759553845 306 LAALGRLTAGIAHEIRNPLGAISHAAQLLQESETLDAPDRRLTQIIQDQSRRMNLVIENVLQLSR 370
Cdd:cd00082 1 LQAKGEFLANVSHELRTPLTAIRGALELLEEELLDDEEQREYLERIREEAERLLRLINDLLDLSR 65
|
|
| PRK10755 |
PRK10755 |
two-component system sensor histidine kinase PmrB; |
313-516 |
2.24e-14 |
|
two-component system sensor histidine kinase PmrB;
Pssm-ID: 236751 [Multi-domain] Cd Length: 356 Bit Score: 74.62 E-value: 2.24e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 313 TAGIAHEIRNPLGAISHAAQLLQESETLDAPD--RRLTQiiqdqsrrMNLVIENVLQLSRRRQA----EPQQLDlrqWLQ 386
Cdd:PRK10755 141 TADVAHELRTPLAGIRLHLELLEKQHHIDVAPliARLDQ--------MMHTVEQLLQLARAGQSfssgHYQTVK---LLE 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 387 RFTDEQREGLRG-----DQQIHLQMGGGEIQTRMDPSQLTQVLGNLVQNGLRYSArQNGSGQVWLnlfrDRDSDLPVLEV 461
Cdd:PRK10755 210 DVILPSQDELSEmleqrQQTLLLPESAADITVQGDATLLRLLLRNLVENAHRYSP-EGSTITIKL----SQEDGGAVLAV 284
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 759553845 462 LDDGPGIAPEQLGKLFEPFFTTESK--GTGLGLYISRELCESNQARIDFKNRDEGGG 516
Cdd:PRK10755 285 EDEGPGIDESKCGELSKAFVRMDSRygGIGLGLSIVSRITQLHHGQFFLQNRQERSG 341
|
|
| PRK09303 |
PRK09303 |
histidine kinase; |
311-506 |
4.73e-14 |
|
histidine kinase;
Pssm-ID: 236462 [Multi-domain] Cd Length: 380 Bit Score: 73.83 E-value: 4.73e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 311 RLTAGIAHEIRNPLGAISHAAQLLQ------ESETLDAPDRRLTQIIQDQSRRMNLVIENVLQLSRRRQAE----PQQLD 380
Cdd:PRK09303 153 RVLAMLAHDLRTPLTAASLALETLElgqideDTELKPALIEQLQDQARRQLEEIERLITDLLEVGRTRWEAlrfnPQKLD 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 381 LRQWLQRFTDEQREGLRGDQQihlqmgggEIQTRM---------DPSQLTQVLGNLVQNGLRYSarqNGSGQVWLNLFrD 451
Cdd:PRK09303 233 LGSLCQEVILELEKRWLAKSL--------EIQTDIpsdlpsvyaDQERIRQVLLNLLDNAIKYT---PEGGTITLSML-H 300
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 759553845 452 RDSDLPVLEVLDDGPGIAPEQLGKLFEPFF------TTEskGTGLGLYISRELCESNQARI 506
Cdd:PRK09303 301 RTTQKVQVSICDTGPGIPEEEQERIFEDRVrlprdeGTE--GYGIGLSVCRRIVRVHYGQI 359
|
|
| HisKA |
smart00388 |
His Kinase A (phosphoacceptor) domain; Dimerisation and phosphoacceptor domain of histidine ... |
308-373 |
1.23e-13 |
|
His Kinase A (phosphoacceptor) domain; Dimerisation and phosphoacceptor domain of histidine kinases.
Pssm-ID: 214644 [Multi-domain] Cd Length: 66 Bit Score: 65.67 E-value: 1.23e-13
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 759553845 308 ALGRLTAGIAHEIRNPLGAISHAAQLLQESEtLDAPDRRLTQIIQDQSRRMNLVIENVLQLSRRRQ 373
Cdd:smart00388 1 AKREFLANLSHELRTPLTAIRGYLELLLDTE-LSEEQREYLETILREAERLLRLINDLLDLSRIEA 65
|
|
| HATPase_BaeS-like |
cd16946 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
416-522 |
1.40e-13 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli BasS; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) similar to Escherichia coli BaeS HK of the BaeS/BaeR two-component regulatory system (TCS), which responds to envelope stress. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA), and a HAMP sensory domain.
Pssm-ID: 340422 [Multi-domain] Cd Length: 109 Bit Score: 67.10 E-value: 1.40e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 416 DPSQLTQVLGNLVQNGLRYSaRQNGSGQVwlnlfRDRDSDLPV-LEVLDDGPGIAPEQLGKLFEPFFTTESK------GT 488
Cdd:cd16946 1 DRDRLQQLFVNLLENSLRYT-DTGGKLRI-----RAAQTPQEVrLDVEDSAPGVSDDQLARLFERFYRVESSrnrasgGS 74
|
90 100 110
....*....|....*....|....*....|....
gi 759553845 489 GLGLYISRELCESNQARIDFKNRDEGGGSFRITF 522
Cdd:cd16946 75 GLGLAICHNIALAHGGTISAEHSPLGGLRLVLTL 108
|
|
| COG4192 |
COG4192 |
Signal transduction histidine kinase regulating phosphoglycerate transport system [Signal ... |
305-506 |
3.69e-13 |
|
Signal transduction histidine kinase regulating phosphoglycerate transport system [Signal transduction mechanisms];
Pssm-ID: 443346 [Multi-domain] Cd Length: 640 Bit Score: 72.03 E-value: 3.69e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 305 KLAALGRLTAGIAHEIRNPLGAIS---HAAQLLQESETLDAPDRRLTQIIQdQSRRMNLVIENVLQLSRRRQAEPQQLDL 381
Cdd:COG4192 429 KMAVVGQTMTSLAHELNQPLNAMSmylFSAKKALEQENYAQLPTSLDKIEG-LIERMDKIIKSLRQFSRKSDTPLQPVDL 507
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 382 RQWLQRfTDEQREGLRGDQQIHLQMGGgEIQTRMDPSQLTQVLGNLVQNGLRYSArqngsGQVWLNLFRDRDSDLPVLEV 461
Cdd:COG4192 508 RQVIEQ-AWELVESRAKPQQITLHIPD-DLMVQGDQVLLEQVLVNLLVNALDAVA-----TQPQISVDLLSNAENLRVAI 580
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 759553845 462 LDDGPGIApeQLGKLFEPFFTTESKGTGLGLYISRELCESNQARI 506
Cdd:COG4192 581 SDNGNGWP--LVDKLFTPFTTTKEVGLGLGLSICRSIMQQFGGDL 623
|
|
| HisKA |
pfam00512 |
His Kinase A (phospho-acceptor) domain; dimerization and phospho-acceptor domain of histidine ... |
308-373 |
4.24e-13 |
|
His Kinase A (phospho-acceptor) domain; dimerization and phospho-acceptor domain of histidine kinases.
Pssm-ID: 459839 [Multi-domain] Cd Length: 66 Bit Score: 64.15 E-value: 4.24e-13
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 759553845 308 ALGRLTAGIAHEIRNPLGAISHAAQLLQESEtLDAPDRRLTQIIQDQSRRMNLVIENVLQLSRRRQ 373
Cdd:pfam00512 1 AKSEFLANLSHELRTPLTAIRGYLELLRDEK-LDEEQREYLETILRSAERLLRLINDLLDLSRIEA 65
|
|
| HATPase_DpiB-CitA-like |
cd16915 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
420-521 |
7.38e-13 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli K-12 DpiB, DcuS, and Bacillus subtilis CitS, DctS, and YufL; This family includes histidine kinase-like ATPase domains of Escherichia coli K-12 DpiB and DcuS, and Bacillus subtilis CitS, DctS and MalK histidine kinases (HKs) all of which are two component transduction systems (TCSs). E. coli K-12 DpiB (also known as CitA) is the histidine kinase (HK) of DpiA-DpiB, a two-component signal transduction system (TCS) required for the expression of citrate-specific fermentation genes and genes involved in plasmid inheritance. E. coli K-12 DcuS (also known as YjdH) is the HK of DcuS-DcuR, a TCS that in the presence of the extracellular C4-dicarboxlates, activates the expression of the genes of anaerobic fumarate respiration and of aerobic C4-dicarboxylate uptake. CitS is the HK of Bacillus subtilis CitS-CitT, a TCS which regulates expression of CitM, the Mg-citrate transporter. Bacillus subtilis DctS forms a tripartite sensor unit (DctS/DctA/DctB) for sensing C4 dicarboxylates. Bacillus subtilis MalK (also known as YfuL) is the HK of MalK-MalR (YufL-YufM) a TCS which regulates the expression of the malate transporters MaeN (YufR) and YflS, and is essential for utilization of malate in minimal medium. Proteins having this DpiB-CitA-like HATPase domain generally have sensor domains such as Cache and PAS, and a histidine kinase A (HisKA)-like SpoOB-type, alpha-helical domain.
Pssm-ID: 340392 [Multi-domain] Cd Length: 104 Bit Score: 64.62 E-value: 7.38e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 420 LTQVLGNLVQNGLRYSARQNGSGQVWLNLFRDRDSDLpVLEVLDDGPGIAPEQLGKLFEPFFTT-ESKGTGLGLYISREL 498
Cdd:cd16915 1 LITIVGNLIDNALDALAATGAPNKQVEVFLRDEGDDL-VIEVRDTGPGIAPELRDKVFERGVSTkGQGERGIGLALVRQS 79
|
90 100
....*....|....*....|...
gi 759553845 499 CESNQARIDFKNRDEGGGSFRIT 521
Cdd:cd16915 80 VERLGGSITVESEPGGGTTFSIR 102
|
|
| HATPase_Glnl-NtrB-like |
cd16918 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
420-511 |
1.28e-11 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli GlnL (synonyms NtrB and NRII); This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs), similar to Escherichia coli GlnL/NtrB/NRII HK of the two-component regulatory system (TCS) GlnL/GlnG (NtrB-NtrC, or NRII-NRI), which regulates the transcription of genes encoding metabolic enzymes and permeases in response to carbon and nitrogen status in E. coli and related bacteria. Also included in this family are Rhodobacter capsulatus NtrB, Azospirillum brasilense NtrB, Vibrio alginolyticus NtrB, Rhizobium leguminosarum biovar phaseoli NtrB, and Herbaspirillum seropedicae NtrB. Escherichia coli GlnL/NtrB/NRII is both a kinase and a phosphatase, catalyzing the phosphorylation and dephosphorylation of GlnG/NtrC/NRI. The kinase and phosphatase activities of GlnL/NtrB/NRII are regulated by the PII signal transduction protein, which on binding to GlnL/NtrB/NRII, inhibits the kinase activity of GlnL/NtrB/NRII and activates the GlnL/NtrB/NRII phosphatase activity. Proteins having this HATPase domain also have a histidine kinase dimerization and phosphoacceptor domain (HisKA); some also contain PAS sensor domain(s).
Pssm-ID: 340395 [Multi-domain] Cd Length: 109 Bit Score: 61.26 E-value: 1.28e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 420 LTQVLGNLVQNGLRYSARQNG--------SGQVWLNLFRDRdsdLPV-LEVLDDGPGIAPEQLGKLFEPFFTTESKGTGL 490
Cdd:cd16918 1 LIQVFLNLVRNAAQALAGSGGeiilrtrtQRQVTLGHPRHR---LALrVSVIDNGPGIPPDLQDTIFYPMVSGRENGTGL 77
|
90 100
....*....|....*....|.
gi 759553845 491 GLYISRELCESNQARIDFKNR 511
Cdd:cd16918 78 GLAIAQNIVSQHGGVIECDSQ 98
|
|
| HATPase_RstB-like |
cd16939 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
420-521 |
1.56e-11 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Salmonella typhimurium RstB; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Salmonella typhimurium RstB HK of the RstA-RstB two-component regulatory system (TCS), which regulates expression of the constituents participating in pyrimidine metabolism and iron acquisition, and may be required for regulation of Salmonella motility and invasion. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA), and a HAMP sensor domain.
Pssm-ID: 340416 [Multi-domain] Cd Length: 104 Bit Score: 60.91 E-value: 1.56e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 420 LTQVLGNLVQNGLRYSARQngsgqVWLNLfRDRDSDLpVLEVLDDGPGIAPEQLGKLFEPFF------TTESKGTGLGLY 493
Cdd:cd16939 1 MARALDNLLRNALRYAHRT-----VRIAL-LVSGGRL-TLIVEDDGPGIPAAARERVFEPFVrldpsrDRATGGFGLGLA 73
|
90 100
....*....|....*....|....*...
gi 759553845 494 ISRELCESNQARIDFKNRDEGGGSFRIT 521
Cdd:cd16939 74 IVHRVALWHGGHVECDDSELGGACFRLT 101
|
|
| PRK15347 |
PRK15347 |
two component system sensor kinase; |
316-498 |
3.98e-11 |
|
two component system sensor kinase;
Pssm-ID: 237951 [Multi-domain] Cd Length: 921 Bit Score: 65.82 E-value: 3.98e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 316 IAHEIRNPLGAISHAAQLLQESEtLDAPDRRLTQIIQDQSRRMNLVIENVLQLSRRR--QAE--PQQLDLRQWLqrftde 391
Cdd:PRK15347 405 ISHEIRTPLNGVLGALELLQNTP-LTAEQMDLADTARQCTLSLLAIINNLLDFSRIEsgQMTlsLEETALLPLL------ 477
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 392 qreglrgDQ---QIHLQMGGGEIQTR------------MDPSQLTQVLGNLVQNGLRYSArqngSGQVWLNLfrDRDSDL 456
Cdd:PRK15347 478 -------DQamlTIQGPAQSKSLTLRtfvgahvplylhLDSLRLRQILVNLLGNAVKFTE----TGGIRLRV--KRHEQQ 544
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 759553845 457 PVLEVLDDGPGIAPEQLGKLFEPFFTTE--SKGTGLGLYISREL 498
Cdd:PRK15347 545 LCFTVEDTGCGIDIQQQQQIFTPFYQADthSQGTGLGLTIASSL 588
|
|
| HATPase_BasS-like |
cd16940 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
411-515 |
4.75e-11 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli BasS; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) similar to Escherichia coli BasS HK of the BasS-BasR two-component regulatory system (TCS). Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA); some contain a HAMP sensory domain, while some an N-terminal two-component sensor kinase domain.
Pssm-ID: 340417 [Multi-domain] Cd Length: 113 Bit Score: 59.73 E-value: 4.75e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 411 IQTRMDPSQLTQVLGNLVQNGLRYSARqngSGQVWLNLfrdRDSDLPVLEVLDDGPGIAPEQLGKLFEPFF---TTESKG 487
Cdd:cd16940 5 IQVQGDALLLFLLLRNLVDNAVRYSPQ---GSRVEIKL---SADDGAVIRVEDNGPGIDEEELEALFERFYrsdGQNYGG 78
|
90 100
....*....|....*....|....*...
gi 759553845 488 TGLGLYISRELCESNQARIDFKNRDEGG 515
Cdd:cd16940 79 SGLGLSIVKRIVELHGGQIFLGNAQGGG 106
|
|
| phoR |
PRK11006 |
phosphate regulon sensor histidine kinase PhoR; |
314-523 |
1.07e-10 |
|
phosphate regulon sensor histidine kinase PhoR;
Pssm-ID: 182895 [Multi-domain] Cd Length: 430 Bit Score: 63.49 E-value: 1.07e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 314 AGIAHEIRNPLGAISHAAQLLQESETLDAPDRRLTQIIQDQSRRMNLVIENVLQLSRRRQAEPQQLD-----------LR 382
Cdd:PRK11006 209 ANVSHELRTPLTVLQGYLEMMQDQPLEGALREKALHTMREQTQRMEGLVKQLLTLSKIEAAPTIDLNekvdvpmmlrvLE 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 383 QWLQRFTDEQreglrgdQQIHLQMgGGEIQTRMDPSQLTQVLGNLVQNGLRYSARQNGSGQVWLnlfrdRDSDLPVLEVL 462
Cdd:PRK11006 289 REAQTLSQGK-------HTITFEV-DNSLKVFGNEDQLRSAISNLVYNAVNHTPEGTHITVRWQ-----RVPQGAEFSVE 355
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 759553845 463 DDGPGIAPEQLGKLFEPFF------TTESKGTGLGLYISRELCESNQARIDFKNRDEGGGSFRITFA 523
Cdd:PRK11006 356 DNGPGIAPEHIPRLTERFYrvdkarSRQTGGSGLGLAIVKHALSHHDSRLEIESEVGKGTRFSFVLP 422
|
|
| PRK10549 |
PRK10549 |
two-component system sensor histidine kinase BaeS; |
314-525 |
1.18e-10 |
|
two-component system sensor histidine kinase BaeS;
Pssm-ID: 182539 [Multi-domain] Cd Length: 466 Bit Score: 63.50 E-value: 1.18e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 314 AGIAHEIRNPLgaishaAQLLQESETLDAPDRRLT--QIIQDQSRRMNL--VIENVLQLS-RRRQA---EPQQLDLRQWL 385
Cdd:PRK10549 245 ADISHELRTPL------AVLRGELEAIQDGVRKFTpeSVASLQAEVGTLtkLVDDLHQLSlSDEGAlayRKTPVDLVPLL 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 386 QRFTDEQREGLRgDQQIHLQMGGGEIQTRM-DPSQLTQVLGNLVQNGLRYSARQNGsgqvwLNLFRDRDSDLPVLEVLDD 464
Cdd:PRK10549 319 EVAGGAFRERFA-SRGLTLQLSLPDSATVFgDPDRLMQLFNNLLENSLRYTDSGGS-----LHISAEQRDKTLRLTFADS 392
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 759553845 465 GPGIAPEQLGKLFEPFFTTE------SKGTGLGLYISRELCESNQARIDFKNRDEGGgsFRITFAHP 525
Cdd:PRK10549 393 APGVSDEQLQKLFERFYRTEgsrnraSGGSGLGLAICLNIVEAHNGRIIAAHSPFGG--VSITVELP 457
|
|
| PRK10490 |
PRK10490 |
sensor protein KdpD; Provisional |
312-521 |
1.46e-10 |
|
sensor protein KdpD; Provisional
Pssm-ID: 236701 [Multi-domain] Cd Length: 895 Bit Score: 63.90 E-value: 1.46e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 312 LTAGIAHEIRNPLGAISHAAQLLqeseTLD--------APD-RRLTQIIQDQSRRMNlvieNVLQLSRRrQAEPQQLDLr 382
Cdd:PRK10490 667 LLAALSHDLRTPLTVLFGQAEIL----TLDlasegsphARQaSEIRQQVLNTTRLVN----NLLDMARI-QSGGFNLRK- 736
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 383 QW--LQRFTD---EQREGLRGDQQIHLQMGGGEIQTRMDPSQLTQVLGNLVQNGLRYSARQNGSG------QVWLNLfrd 451
Cdd:PRK10490 737 EWltLEEVVGsalQMLEPGLSGHPINLSLPEPLTLIHVDGPLFERVLINLLENAVKYAGAQAEIGidahveGERLQL--- 813
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 759553845 452 rdsdlpvlEVLDDGPGIAPEQLGKLFEPFF--TTESK--GTGLGLYISRELCESNQARIDFKNRDEGGGSFRIT 521
Cdd:PRK10490 814 --------DVWDNGPGIPPGQEQLIFDKFArgNKESAipGVGLGLAICRAIVEVHGGTIWAENRPEGGACFRVT 879
|
|
| PRK11466 |
PRK11466 |
hybrid sensory histidine kinase TorS; Provisional |
314-520 |
1.85e-10 |
|
hybrid sensory histidine kinase TorS; Provisional
Pssm-ID: 236914 [Multi-domain] Cd Length: 914 Bit Score: 63.77 E-value: 1.85e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 314 AGIAHEIRNPLGAISHAAQLLQESETLDApDRRLTQIIQDQSRRMNLVIENVLQLS-----------RRRQAEPQQLdLR 382
Cdd:PRK11466 449 AAMSHEIRTPLYGILGTAQLLADNPALNA-QRDDLRAITDSGESLLTILNDILDYSaieaggknvsvSDEPFEPRPL-LE 526
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 383 QWLQRFTDE-QREGLRGDQQIHLQMgggEIQTRMDPSQLTQVLGNLVQNGLRYSARqngsGQVWLNLFRDRDSDLpvLEV 461
Cdd:PRK11466 527 STLQLMSGRvKGRPIRLATDIADDL---PTALMGDPRRIRQVITNLLSNALRFTDE----GSIVLRSRTDGEQWL--VEV 597
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 759553845 462 LDDGPGIAPEQLGKLFEPFFTTESK--GTGLGLYISRELCESNQARIDFKNRDEGGGSFRI 520
Cdd:PRK11466 598 EDSGCGIDPAKLAEIFQPFVQVSGKrgGTGLGLTISSRLAQAMGGELSATSTPEVGSCFCL 658
|
|
| HATPase_PhoQ-like |
cd16954 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
410-522 |
6.76e-10 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli PhoQ and Providencia stuartii AarG; This family includes histidine kinase-like ATPase (HATPase) domain of two-component sensor histidine kinases similar to Escherichia coli PhoQ and Providencia stuartii AarG. PhoQ is the histidine kinase (HK) of the PhoP-PhoQ two-component regulatory system (TCS), which responds to the levels of Mg2+ and Ca2+, controls virulence, mediates the adaptation to Mg2+-limiting environments, and regulates numerous cellular activities. Providencia stuartii AarG is a putative sensor kinase which controls the expression of the 2'-N-acetyltransferase and an intrinsic multiple antibiotic resistance (Mar) response in Providencia stuartii. The AarG product is similar to PhoQ in that it is able to restore wild-type levels of resistance to a Salmonella typhimurium phoQ mutant. However, the expression of the 2'-N-acetyltransferase gene and of aarP (a gene encoding a transcriptional activator of 2'-N-acetyltransferase) are not significantly affected by the levels of Mg2+ or Ca2+. Most proteins in this group contain a histidine kinase dimerization and phosphoacceptor domain (HisKA); some have an accessory HAMP sensor domain, and some have an intracellular membrane -interaction PhoQ sensor domain.
Pssm-ID: 340430 [Multi-domain] Cd Length: 135 Bit Score: 57.26 E-value: 6.76e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 410 EIQTRMDPSQLTQVLGNLVQNGLRYSarqngSGQVWLNLfRDRDSDLpVLEVLDDGPGIAPEQLGKLFE--PFFTTESKG 487
Cdd:cd16954 28 ELRFPGERNDLMELLGNLLDNACKWC-----LEFVEVTA-RQTDGGL-HLIVDDDGPGVPESQRSKIFQrgQRLDEQRPG 100
|
90 100 110
....*....|....*....|....*....|....*
gi 759553845 488 TGLGLYISRELCESNQARIDFKNRDEGGGSFRITF 522
Cdd:cd16954 101 QGLGLAIAKEIVEQYGGELSLSDSPLGGARFEVVF 135
|
|
| PRK09959 |
PRK09959 |
acid-sensing system histidine kinase EvgS; |
308-521 |
9.96e-10 |
|
acid-sensing system histidine kinase EvgS;
Pssm-ID: 182169 [Multi-domain] Cd Length: 1197 Bit Score: 61.29 E-value: 9.96e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 308 ALGRLTAGIAHEIRNPLGAISHAAQLLQESETldAPDRRLTQIIQDQSRRMNLV--IENVLQLSR----RRQAEPQQLDL 381
Cdd:PRK09959 711 AKSQFLATMSHEIRTPISSIMGFLELLSGSGL--SKEQRVEAISLAYATGQSLLglIGEILDVDKiesgNYQLQPQWVDI 788
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 382 RQWLQRfTDEQREGLRGDQQIHLQMGG---GEIQTRMDPSQLTQVLGNLVQNGLRYSARqnGSGQVWLNLFRDRDSDLPV 458
Cdd:PRK09959 789 PTLVQN-TCHSFGAIAASKSIALSCSStfpDHYLVKIDPQAFKQVLSNLLSNALKFTTE--GAVKITTSLGHIDDNHAVI 865
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 759553845 459 -LEVLDDGPGIAPEQLGKLFEPFFTT----ESKGTGLGLYISRELCESNQARIDFKNRDEGGGSFRIT 521
Cdd:PRK09959 866 kMTIMDSGSGLSQEEQQQLFKRYSQTsagrQQTGSGLGLMICKELIKNMQGDLSLESHPGIGTTFTIT 933
|
|
| HATPase_CreC-like |
cd16945 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
416-518 |
1.34e-09 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli CreC; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Escherichia coli CreC of the CreC-CreB two-component regulatory system (TCS) involved in catabolic regulation. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA), and accessory sensory domain(s) such as HAMP, CACHE or PAS.
Pssm-ID: 340421 [Multi-domain] Cd Length: 106 Bit Score: 55.54 E-value: 1.34e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 416 DPSQLTQVLGNLVQNGLRYSARqngSGQVWLNLfrDRDSDLPVLEVLDDGPGIAPEQLGKLFEPFFT-----TESKGTGL 490
Cdd:cd16945 1 DPFLLRQAINNLLDNAIDFSPE---GGLIALQL--EADTEGIELLVFDEGSGIPDYALNRVFERFYSlprphSGQKSTGL 75
|
90 100
....*....|....*....|....*...
gi 759553845 491 GLYISRELCESNQARIDFKNRDEGGGSF 518
Cdd:cd16945 76 GLAFVQEVAQLHGGRITLRNRPDGVLAF 103
|
|
| HATPase_BvrS-ChvG-like |
cd16953 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
420-515 |
1.53e-09 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Brucella abortus BvrS and Sinorhizobium meliloti ChvG; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Brucella abortus BvrS of the BvrR-BvrS two-component regulatory system (TCS), which controls cell invasion and intracellular survival, as well as Sinorhizobium meliloti and Agrobacterium tumefaciens ChvG of the ChvI-ChvG TCS necessary for endosymbiosis and pathogenicity in plants. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA), an accessory HAMP sensor domain, a periplasmic stimulus-sensing domain, and some also have a sensor N-terminal transmembrane domain.
Pssm-ID: 340429 [Multi-domain] Cd Length: 110 Bit Score: 55.66 E-value: 1.53e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 420 LTQVLGNLVQNGLRYSARQNGSgqvwLNLFRDRDSDLPVLEVLDDGPGIAPEQLGKLFEPFFTTESKG------TGLGLY 493
Cdd:cd16953 1 LGQVLRNLIGNAISFSPPDTGR----ITVSAMPTGKMVTISVEDEGPGIPQEKLESIFDRFYTERPANeafgqhSGLGLS 76
|
90 100
....*....|....*....|..
gi 759553845 494 ISRELCESNQARIDFKNRDEGG 515
Cdd:cd16953 77 ISRQIIEAHGGISVAENHNQPG 98
|
|
| PRK11086 |
PRK11086 |
sensory histidine kinase DcuS; Provisional |
416-520 |
1.98e-09 |
|
sensory histidine kinase DcuS; Provisional
Pssm-ID: 236839 [Multi-domain] Cd Length: 542 Bit Score: 59.93 E-value: 1.98e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 416 DPSQ---LTQVLGNLVQNGLRySARQNGSGQVWLnLFRDRDSDLPVlEVLDDGPGIAPEQLGKLFEPFFTTESKGTGLGL 492
Cdd:PRK11086 427 DEDQvheLITILGNLIENALE-AVGGEEGGEISV-SLHYRNGWLHC-EVSDDGPGIAPDEIDAIFDKGYSTKGSNRGVGL 503
|
90 100
....*....|....*....|....*...
gi 759553845 493 YISRELCESNQARIDFKNRDEGGGSFRI 520
Cdd:PRK11086 504 YLVKQSVENLGGSIAVESEPGVGTQFFV 531
|
|
| HATPase_FilI-like |
cd16921 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
420-521 |
9.34e-09 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Methanosaeta harundinacea FilI and some hybrid sensor histidine kinases; This family includes FilI, the histidine kinase (HK) component of FilI-FilRs, a two-component signal transduction system (TCS) of the methanogenic archaeon, Methanosaeta harundinacea, which is involved in regulating methanogenesis. The cytoplasmic HK core consists of a C-terminal HK-like ATPase domain (represented here) and a histidine kinase dimerization and phosphoacceptor domain (HisKA) domain, which, in FilI, are coupled to CHASE, HAMP, PAS, and GAF sensor domains. FilI-FilRs catalyzes the phosphotransfer between FilI (HK) and FilRs (FilR1 and FilR2, response regulators) of the TCS. TCSs are predicted to be of bacterial origin, and acquired by archaea by horizontal gene transfer. This model also includes related HATPase domains such as that of Synechocystis sp. PCC6803 phytochrome-like protein Cph1. Proteins having this HATPase domain and HisKA domain also have accessory sensor domains such as CHASE, GAF, HAMP and PAS; some are hybrid sensor histidine kinases as they also contain a REC signal receiver domain.
Pssm-ID: 340398 [Multi-domain] Cd Length: 105 Bit Score: 53.10 E-value: 9.34e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 420 LTQVLGNLVQNGLRY-SARQNGSGQVWLnlfrDRDSDLPVLEVLDDGPGIAPEQLGKLFEPF----FTTESKGTGLGLYI 494
Cdd:cd16921 1 LGQVLTNLLGNAIKFrRPRRPPRIEVGA----EDVGEEWTFYVRDNGIGIDPEYAEKVFGIFqrlhSREEYEGTGVGLAI 76
|
90 100
....*....|....*....|....*..
gi 759553845 495 SRELCESNQARIDFKNRDEGGGSFRIT 521
Cdd:cd16921 77 VRKIIERHGGRIWLESEPGEGTTFYFT 103
|
|
| cpxA |
PRK09470 |
envelope stress sensor histidine kinase CpxA; |
311-494 |
3.07e-08 |
|
envelope stress sensor histidine kinase CpxA;
Pssm-ID: 236532 [Multi-domain] Cd Length: 461 Bit Score: 56.09 E-value: 3.07e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 311 RLTAGIAHEIRNPLGAISHAAQLLQesetldapdRRL-----TQIIQDQSRRMNLVIENVLQLSRrrqaepQQLDLRQWL 385
Cdd:PRK09470 245 RLLSDISHELRTPLTRLQLATALLR---------RRQgeskeLERIETEAQRLDSMINDLLVLSR------NQQKNHLER 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 386 QRFT-DEQREGLRGDQQIHL-QMGG--------GEIQTRMDPSQLTQVLGNLVQNGLRYSarqNGSGQVwlnLFRDRDSD 455
Cdd:PRK09470 310 ETFKaNSLWSEVLEDAKFEAeQMGKsltvsappGPWPINGNPNALASALENIVRNALRYS---HTKIEV---AFSVDKDG 383
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 759553845 456 LPVLeVLDDGPGIAPEQLGKLFEPFFTT------ESKGTGLGLYI 494
Cdd:PRK09470 384 LTIT-VDDDGPGVPEEEREQIFRPFYRVdeardrESGGTGLGLAI 427
|
|
| PRK09835 |
PRK09835 |
Cu(+)/Ag(+) sensor histidine kinase; |
313-506 |
3.36e-08 |
|
Cu(+)/Ag(+) sensor histidine kinase;
Pssm-ID: 182101 [Multi-domain] Cd Length: 482 Bit Score: 55.93 E-value: 3.36e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 313 TAGIAHEIRNPLgaishaAQLLQESETLDAPDR---RLTQIIQ---DQSRRMNLVIENVLQLSrrrQAEPQQLDLRQWLQ 386
Cdd:PRK09835 266 SADIAHEIRTPI------TNLITQTEIALSQSRsqkELEDVLYsnlEELTRMAKMVSDMLFLA---QADNNQLIPEKKML 336
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 387 RFTDEQR------EGLRGDQQIHLQMGGGEIQTRMDPSQLTQVLGNLVQNGLRYSArqngSGQVWLNLFRDRDsDLPVLE 460
Cdd:PRK09835 337 DLADEVGkvfdffEAWAEERGVELRFVGDPCQVAGDPLMLRRAISNLLSNALRYTP----AGEAITVRCQEVD-HQVQLV 411
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 759553845 461 VLDDGPGIAPEQLGKLFEPFFTTE------SKGTGLGLYISRELCESNQARI 506
Cdd:PRK09835 412 VENPGTPIAPEHLPRLFDRFYRVDpsrqrkGEGSGIGLAIVKSIVVAHKGTV 463
|
|
| nifL_nitrog |
TIGR02938 |
nitrogen fixation negative regulator NifL; NifL is a modulator of the nitrogen fixation ... |
305-515 |
9.37e-08 |
|
nitrogen fixation negative regulator NifL; NifL is a modulator of the nitrogen fixation positive regulator protein NifA, and is therefore a negative regulator. It binds NifA. NifA and NifL are encoded by adjacent genes. [Central intermediary metabolism, Nitrogen fixation, Regulatory functions, Protein interactions]
Pssm-ID: 131984 [Multi-domain] Cd Length: 494 Bit Score: 54.52 E-value: 9.37e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 305 KLAALGRLTAGIAHEIRNPLGAISHAAQLLQE--SETLDAPDRRLTQIIQDQSRRMNLVIENVLQLSRRRQAEPQQLD-- 380
Cdd:TIGR02938 272 RLEAIRETLSAAIHRLQGPMNLISAAISVLQRrgDDAGNPASAAMLQQALSAGREHMEALRQVIPQSPQEIVVPVNLNqi 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 381 LRQWLQRFTDEQ-REGLRGDQQIHLQMG---GGEIQTRMdpsqltqVLGNLVQNGLRySARQNGSGQVWLNLFRDRDSDL 456
Cdd:TIGR02938 352 LRDVITLSTPRLlAAGIVVDWQPAATLPailGRELQLRS-------LFKALVDNAIE-AMNIKGWKRRELSITTALNGDL 423
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 759553845 457 PVLEVLDDGPGIAPEQLGKLFEPFFTTES---KGTGLGLYISRELCESNQARIDFKNRDEGG 515
Cdd:TIGR02938 424 IVVSILDSGPGIPQDLRYKVFEPFFTTKGgsrKHIGMGLSVAQEIVADHGGIIDLDDDYSEG 485
|
|
| HATPase_SpaK_NisK-like |
cd16975 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
416-522 |
6.83e-07 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Bacillus subtilis SpaK and Lactococcus lactis NisK; This family includes histidine kinase-like ATPase (HATPase) domain of two-component sensor histidine kinases similar to Bacillus subtilis SpaK and Lactococcus lactis NisK. SpaK is the histidine kinase (HK) of the SpaK-SpaR two-component regulatory system (TCS), which is involved in the regulation of the biosynthesis of lantibiotic subtilin. NisK is the HK of the NisK-NisR TCS, which is involved in the regulation of the biosynthesis of lantibiotic nisin. SpaK and NisK may function as membrane-associated protein kinases that phosphorylate SpaR and NisR, respectively, in response to environmental signals.
Pssm-ID: 340434 [Multi-domain] Cd Length: 107 Bit Score: 47.84 E-value: 6.83e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 416 DPSQLTQVLGNLVQNGLRYsARQNGSGQVWLNLfrdrDSDLPVLEVLDDGPGIAPEQLGKLFEPFFTTE----SKG-TGL 490
Cdd:cd16975 1 DTLLLSRALINIISNACQY-APEGGTVSISIYD----EEEYLYFEIWDNGHGFSEQDLKKALELFYRDDtsrrSGGhYGM 75
|
90 100 110
....*....|....*....|....*....|..
gi 759553845 491 GLYISRELCESNQARIDFKNRDEGGGSFRITF 522
Cdd:cd16975 76 GLYIAKNLVEKHGGSLIIENSQKGGAEVTVKI 107
|
|
| HATPase_CckA-like |
cd16919 |
Histidine kinase-like ATPase domain of two-component sensor hybrid histidine kinases, similar ... |
458-492 |
6.89e-07 |
|
Histidine kinase-like ATPase domain of two-component sensor hybrid histidine kinases, similar to Brucella abortus 2308 CckA; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component hybrid sensor histidine kinase (HKs) similar to Brucella abortus 2308 CckA, which is a component of an essential protein phosphorelay that regulates expression of genes required for growth, division, and intracellular survival; phosphoryl transfer initiates from the sensor kinase CckA and proceeds via the ChpT phosphotransferase to two regulatory substrates: the DNA-binding response regulator CtrA and the phospho-receiver protein CpdR. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA), a REC signal receiver domain, and some contain PAS or PAS and GAF sensor domain(s).
Pssm-ID: 340396 [Multi-domain] Cd Length: 116 Bit Score: 48.14 E-value: 6.89e-07
10 20 30
....*....|....*....|....*....|....*..
gi 759553845 458 VLEVLDDGPGIAPEQLGKLFEPFFTT--ESKGTGLGL 492
Cdd:cd16919 49 CLEVSDTGSGMPAEVLRRAFEPFFTTkeVGKGTGLGL 85
|
|
| HATPase_EcPhoR-like |
cd16952 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
420-526 |
8.66e-07 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli PhoR; This family includes histidine kinase-like ATPase (HATPase) domain of two-component sensor histidine kinases similar to Escherichia coli or Vibrio cholera PhoR, the histidine kinase (HK) of PhoB-PhoR a two-component signal transduction system (TCS) involved in phosphate regulation. PhoR monitors extracellular inorganic phosphate (Pi) availability and PhoB, the response regulator, regulates transcription of genes of the phosphate regulon. PhoR is a bifunctional histidine autokinase/phospho-PhoB phosphatase; in phosphate deficiency, it autophosphorylates and Pi is transferred to PhoB, and when environmental Pi is abundant, it removes the phosphoryl group from phosphorylated PhoB. Other roles of PhoB-PhoR TCS have been described, including motility, biofilm formation, intestinal colonization, and virulence in V. cholera. E.coli PhoR and Bacillus subtilis PhoR (whose HATPase domain belongs to a different family) sense very different signals in each bacterium. In E. coli the PhoR signal comes from phosphate transport mediated by the PstSCAB2 phosphate transporter and the PhoU chaperone-like protein while in B. subtilis, the PhoR activation signal comes from wall teichoic acid (WTA) metabolism.
Pssm-ID: 340428 [Multi-domain] Cd Length: 108 Bit Score: 47.58 E-value: 8.66e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 420 LTQVLGNLVQNGLRYSARQNGSGQVWlnlfrDRDSDLPVLEVLDDGPGIAPEQLGKLFEPFFTTESK------GTGLGLY 493
Cdd:cd16952 1 LRSAFSNLVSNAVKYTPPSDTITVRW-----SQEESGARLSVEDTGPGIPPEHIPRLTERFYRVDIErcrntgGTGLGLA 75
|
90 100 110
....*....|....*....|....*....|...
gi 759553845 494 ISRELCESNQARIDFKNRDEGGGSFRITFAHPR 526
Cdd:cd16952 76 IVKHVMSRHDARLLIASELGKGSRFTCLFPSSR 108
|
|
| PRK11091 |
PRK11091 |
aerobic respiration control sensor protein ArcB; Provisional |
316-521 |
1.49e-06 |
|
aerobic respiration control sensor protein ArcB; Provisional
Pssm-ID: 236842 [Multi-domain] Cd Length: 779 Bit Score: 51.09 E-value: 1.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 316 IAHEIRNPLGAISHAAQLLQESEtLDAPDRRLTQIIQDQSRRM----NLVIEnVLQLSRRR-QAEPQQLDLRQwlqrFTD 390
Cdd:PRK11091 290 ISHELRTPLNGIVGLSRILLDTE-LTAEQRKYLKTIHVSAITLgnifNDIID-MDKMERRKlQLDNQPIDFTD----FLA 363
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 391 E---------QREGLRGDQQIHLQMgggEIQTRMDPSQLTQVLGNLVQNGLRYSARqngsGQVWLNLFRDRDSDLpVLEV 461
Cdd:PRK11091 364 DlenlsglqaEQKGLRFDLEPLLPL---PHKVITDGTRLRQILWNLISNAVKFTQQ----GGVTVRVRYEEGDML-TFEV 435
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 759553845 462 LDDGPGIAPEQLGKLFEPFF-------TTESKGTGLGLYISRELCESNQARIDFKNrDEGGGS-FRIT 521
Cdd:PRK11091 436 EDSGIGIPEDELDKIFAMYYqvkdshgGKPATGTGIGLAVSKRLAQAMGGDITVTS-EEGKGScFTLT 502
|
|
| PRK10841 |
PRK10841 |
two-component system sensor histidine kinase RcsC; |
416-500 |
2.01e-06 |
|
two-component system sensor histidine kinase RcsC;
Pssm-ID: 182772 [Multi-domain] Cd Length: 924 Bit Score: 50.74 E-value: 2.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 416 DPSQLTQVLGNLVQNGLRYSArqngSGQVWLNLFRDrdSDLPVLEVLDDGPGIAPEQLGKLFEPFFT------TESKGTG 489
Cdd:PRK10841 559 DPMRLQQVISNLLSNAIKFTD----TGCIVLHVRVD--GDYLSFRVRDTGVGIPAKEVVRLFDPFFQvgtgvqRNFQGTG 632
|
90
....*....|.
gi 759553845 490 LGLYIsrelCE 500
Cdd:PRK10841 633 LGLAI----CE 639
|
|
| HATPase_YcbM-like |
cd16947 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
401-521 |
2.51e-06 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Bacillus subtilis YcbM; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Bacillus subtilis YcbM, a HK of the two-component system YcbM-YcbL. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA).
Pssm-ID: 340423 [Multi-domain] Cd Length: 125 Bit Score: 46.74 E-value: 2.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 401 QIHLQMGGGEIQTRMDPSQLTQVLGNLVQNGLRYsarqnGSGQVWLNLFRDRDSDLPVLEVLDDGPGIAPEQLGKLFEPF 480
Cdd:cd16947 2 QVEINIPDRPIYANANTEALQRILKNLISNAIKY-----GSDGKFLGMTLREDEKHVYIDIWDKGKGISETEKDHVFERL 76
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 759553845 481 FTTES------KGTGLGLYISRELCESNQARIDFKNRDEGGGSFRIT 521
Cdd:cd16947 77 YTLEDsrnsakQGNGLGLTITKRLAESMGGSIYVNSKPYEKTVFTVT 123
|
|
| HATPase_TutC-TodS-like |
cd16925 |
Histidine kinase-like ATPase domain of hybrid sensor histidine kinases similar to Pseudomonas ... |
416-520 |
2.17e-05 |
|
Histidine kinase-like ATPase domain of hybrid sensor histidine kinases similar to Pseudomonas putida TodS and Thauera aromatica TutC; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component hybrid sensor histidine kinase (HKs) such Pseudomonas putida TodS HK of the TodS-TodT two-component regulatory system (TCS) which controls the expression of a toluene degradation pathway. Thauera aromatica TutC may be part of a TCS that is involved in anaerobic toluene metabolism. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA), PAS sensor domain(s) and a REC domain.
Pssm-ID: 340402 [Multi-domain] Cd Length: 110 Bit Score: 43.64 E-value: 2.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 416 DPSQLTQVLGNLVQNGLRYSArQNGSGQVWLNLFRdrdSDLPVLEVLDDGPGIAPEQLGKLFEPF------FTTESKGTG 489
Cdd:cd16925 1 DAEKYERVVLNLLSNAFKFTP-DGGRIRCILEKFR---LNRFLLTVSDSGPGIPPNLREEIFERFrqgdgsSTRAHGGTG 76
|
90 100 110
....*....|....*....|....*....|.
gi 759553845 490 LGLYISRELCESNQARIDFKNRDEGGGSFRI 520
Cdd:cd16925 77 LGLSIVKEFVELHGGTVTVSDAPGGGALFQV 107
|
|
| RsbW |
COG2172 |
Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms]; |
427-514 |
4.25e-05 |
|
Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms];
Pssm-ID: 441775 [Multi-domain] Cd Length: 127 Bit Score: 43.36 E-value: 4.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 427 LVQNGLRYSARQNGSGQVWLNLFRDRDSdLpVLEVLDDGPGIAPEQLGklfEPFftTESKGTGLGLYISRELCEsnqaRI 506
Cdd:COG2172 42 AVTNAVRHAYGGDPDGPVEVELELDPDG-L-EIEVRDEGPGFDPEDLP---DPY--STLAEGGRGLFLIRRLMD----EV 110
|
....*...
gi 759553845 507 DFKNRDEG 514
Cdd:COG2172 111 EYESDPGG 118
|
|
| YesM |
COG2972 |
Sensor histidine kinase YesM [Signal transduction mechanisms]; |
423-528 |
1.96e-04 |
|
Sensor histidine kinase YesM [Signal transduction mechanisms];
Pssm-ID: 442211 [Multi-domain] Cd Length: 445 Bit Score: 43.85 E-value: 1.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 423 VLGNLVQNGLRYSARQ-NGSGQVWLNLFRDrDSDLpVLEVLDDGPGIAPEQLGKLFEPfFTTESKGTGLGLYISRE---L 498
Cdd:COG2972 340 ILQPLVENAIEHGIEPkEGGGTIRISIRKE-GDRL-VITVEDNGVGMPEEKLEKLLEE-LSSKGEGRGIGLRNVRErlkL 416
|
90 100 110
....*....|....*....|....*....|
gi 759553845 499 CESNQARIDFKNRDEGGgsFRITFAHPRKQ 528
Cdd:COG2972 417 YYGEEYGLEIESEPGEG--TTVTIRIPLEE 444
|
|
| PRK11107 |
PRK11107 |
hybrid sensory histidine kinase BarA; Provisional |
416-522 |
7.07e-04 |
|
hybrid sensory histidine kinase BarA; Provisional
Pssm-ID: 236848 [Multi-domain] Cd Length: 919 Bit Score: 42.53 E-value: 7.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 416 DPSQLTQVLGNLVQNGLRYSARQNGSGQVWLNLFRDRDSDLPVlEVLDDGPGIAPEQLGKLFEPFFTTESK------GTG 489
Cdd:PRK11107 405 DPLRLQQIITNLVGNAIKFTESGNIDILVELRALSNTKVQLEV-QIRDTGIGISERQQSQLFQAFRQADASisrrhgGTG 483
|
90 100 110
....*....|....*....|....*....|...
gi 759553845 490 LGLYISRELCESNQARIDFKNRDEGGGSFRITF 522
Cdd:PRK11107 484 LGLVITQKLVNEMGGDISFHSQPNRGSTFWFHL 516
|
|
| dpiB |
PRK15053 |
sensor histidine kinase DpiB; Provisional |
415-494 |
6.23e-03 |
|
sensor histidine kinase DpiB; Provisional
Pssm-ID: 185013 [Multi-domain] Cd Length: 545 Bit Score: 39.05 E-value: 6.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 415 MDPSQLTQVLGNLVQNGLRYSAR-QNGSGQVwlNLFRDRDSDLPVLEVLDDGPGIAPEQLGKLFEPFFTTESKGT---GL 490
Cdd:PRK15053 428 LDSTEFAAIVGNLLDNAFEASLRsDEGNKIV--ELFLSDEGDDVVIEVADQGCGVPESLRDKIFEQGVSTRADEPgehGI 505
|
....
gi 759553845 491 GLYI 494
Cdd:PRK15053 506 GLYL 509
|
|
| COG3920 |
COG3920 |
Two-component sensor histidine kinase, HisKA and HATPase domains [Signal transduction ... |
63-522 |
6.41e-03 |
|
Two-component sensor histidine kinase, HisKA and HATPase domains [Signal transduction mechanisms];
Pssm-ID: 443125 [Multi-domain] Cd Length: 495 Bit Score: 39.12 E-value: 6.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 63 ILIAVLMPTPRQLLPIFLLALFDILALCGLFYAAGGVPSGIGNLLVVAVGIANILLRGRIGLLIAAVAAIGMIYLTFYLS 142
Cdd:COG3920 17 LLLAALLLLAAALLLALLALLLLALLLLALLLASALLALLALSAAALAAALAVALAAAVGAAAALLALLVLLLLLLLAAA 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 143 LSQPTAINHYVQAGSLGALSFAAALLLQGLARRQQLTEHLAEERATTVANLEELNALILQRMRTGILVLDSRHRVLLANQ 222
Cdd:COG3920 97 ALALALLLAALAGLLLLAALLLLRLVALLAALALLALLLLLLLLLAILALAELAVALAELAAALLLLAEELAALRLAAAA 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 223 SALGLLAQPELAGKLATEHCPELLDSLQQWERNPSLRPPSLQAPEGGPMLQPSFIPLRRGEEQHTLVFLEDISQIAQQAQ 302
Cdd:COG3920 177 LLLLLAALLDLGLALAALAAAALLALLLALELLLALLLLLLLLLALLLVLLAALLRLRAAVLEELERRRRARGLGRLLLL 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 303 QLKLAALGRLTAGIAHEIRNPLGAISHAAQLLQESETldapDRRLT------------QIIQD----QSRRM-NLVIENV 365
Cdd:COG3920 257 LLLLLLLLRALLLLAAGIRLVITERKRAEEELEASLE----EKELLlrelhhrvknnlQVVSSllrlQARRAdDPEAREA 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 366 LQLSRRR-------------QAEPQQLDLRQWLQRFTDEQREGLrGDQQIHLQMGGGEIQTRMDPSQ-LTQVLGNLVQNG 431
Cdd:COG3920 333 LEESQNRiqalalvhellyqSEDWEGVDLRDYLRELLEPLRDSY-GGRGIRIELDGPDVELPADAAVpLGLILNELVTNA 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759553845 432 LRYSARQNGSGQVWLNLFRDrDSDLpVLEVLDDGPGIAPEqlgklfepffTTESKGTGLGLYISRELCESNQARIDFKNR 511
Cdd:COG3920 412 LKHAFLSGEGGRIRVSWRRE-DGRL-RLTVSDNGVGLPED----------VDPPARKGLGLRLIRALVRQLGGTLELDRP 479
|
490
....*....|.
gi 759553845 512 DegGGSFRITF 522
Cdd:COG3920 480 E--GTRVRITF 488
|
|
| |
