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Conserved domains on  [gi|759929050|ref|WP_043614373|]
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flagellar filament capping protein FliD [Chromobacterium violaceum]

Protein Classification

flagellar filament capping protein FliD( domain architecture ID 11442561)

flagellar filament capping protein FliD is required for the morphogenesis and elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament

Gene Ontology:  GO:0007155|GO:0009288
PubMed:  27664419

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FliD COG1345
Flagellar capping protein FliD [Cell motility];
1-458 1.55e-88

Flagellar capping protein FliD [Cell motility];


:

Pssm-ID: 440956 [Multi-domain]  Cd Length: 450  Bit Score: 277.11  E-value: 1.55e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050   1 MSSISAS--AGPLDVQSIVSQLIQADSQPLAQSRQRASTYQSELSVIGQVSSALSALQSAASTLQSGSFLQQFSATSSDS 78
Cdd:COG1345    1 MASISSLglGSGLDTDSLVSQLMAAERAPLTRLTQQQTSLEAQISAYGTLKSALSSLQDALSALKKSSTFNAKKATSSNE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050  79 TVASVSTSSGGAAGTYVLNVSQLAKSRQLVfdqnpnGSAITDQNAAISGapSSLSFSVG-GASSTVQLGSNASLSSIANS 157
Cdd:COG1345   81 SAVTATATSGAAAGSYSIEVTQLAQAQSLA------SAAFASATTTLGT--GTLTITVGdGKTVTITIDANDTLADIADA 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 158 INGAGIGVNASIVQyNNTYSLVLSSAQAGPGNAFSITAGGADSNNTSGNTlaglqQSATAASESANAQSALMTVNGVNVS 237
Cdd:COG1345  153 INAAGAGVTASIVN-DGSYRLVLTSKKTGAANAITVSVSGDGALSALLGF-----DPASGMTETQAAQDAKLTVNGITIT 226

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 238 SDSNSVTSVVNGATINLEKT--GQVTINMAQSTTNITNTLQTFINAYNQVITTTASATQShTTVGSTPTNTDISGD--LT 313
Cdd:COG1345  227 SSSNTFTDAIDGVTLTLKKVtgGPVTLTVSTDTDAIKKAIKDFVDAYNELIDTINSLTKY-TKDEETAKAGALLGDstLR 305

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 314 SLQEHMASILGTPvkgVDATSSYAYLAQVGITQKADGTLTLDSSAFNAALTANPSAVANLF-GNSQNTGVANVFNTTINS 392
Cdd:COG1345  306 SLQSQLRSALSSP---VSGGGSYKSLSDIGITTDKDGKLELDETKLDKALAEDPDAVAKLFtGDGKTTGIATRLDDLLDS 382

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 759929050 393 LLGPNGLITSNQTNLNSKVTAEQQLQERLQNQLNNEQTSLLTEYSNLNSELAQMQQASSSMANLIA 458
Cdd:COG1345  383 YTGSDGTITSRTDGLNKQLKDLDDQIERLEDRLEAREARYRKQFTALDTAMSQLNSQSSYLTQQLA 448
 
Name Accession Description Interval E-value
FliD COG1345
Flagellar capping protein FliD [Cell motility];
1-458 1.55e-88

Flagellar capping protein FliD [Cell motility];


Pssm-ID: 440956 [Multi-domain]  Cd Length: 450  Bit Score: 277.11  E-value: 1.55e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050   1 MSSISAS--AGPLDVQSIVSQLIQADSQPLAQSRQRASTYQSELSVIGQVSSALSALQSAASTLQSGSFLQQFSATSSDS 78
Cdd:COG1345    1 MASISSLglGSGLDTDSLVSQLMAAERAPLTRLTQQQTSLEAQISAYGTLKSALSSLQDALSALKKSSTFNAKKATSSNE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050  79 TVASVSTSSGGAAGTYVLNVSQLAKSRQLVfdqnpnGSAITDQNAAISGapSSLSFSVG-GASSTVQLGSNASLSSIANS 157
Cdd:COG1345   81 SAVTATATSGAAAGSYSIEVTQLAQAQSLA------SAAFASATTTLGT--GTLTITVGdGKTVTITIDANDTLADIADA 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 158 INGAGIGVNASIVQyNNTYSLVLSSAQAGPGNAFSITAGGADSNNTSGNTlaglqQSATAASESANAQSALMTVNGVNVS 237
Cdd:COG1345  153 INAAGAGVTASIVN-DGSYRLVLTSKKTGAANAITVSVSGDGALSALLGF-----DPASGMTETQAAQDAKLTVNGITIT 226

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 238 SDSNSVTSVVNGATINLEKT--GQVTINMAQSTTNITNTLQTFINAYNQVITTTASATQShTTVGSTPTNTDISGD--LT 313
Cdd:COG1345  227 SSSNTFTDAIDGVTLTLKKVtgGPVTLTVSTDTDAIKKAIKDFVDAYNELIDTINSLTKY-TKDEETAKAGALLGDstLR 305

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 314 SLQEHMASILGTPvkgVDATSSYAYLAQVGITQKADGTLTLDSSAFNAALTANPSAVANLF-GNSQNTGVANVFNTTINS 392
Cdd:COG1345  306 SLQSQLRSALSSP---VSGGGSYKSLSDIGITTDKDGKLELDETKLDKALAEDPDAVAKLFtGDGKTTGIATRLDDLLDS 382

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 759929050 393 LLGPNGLITSNQTNLNSKVTAEQQLQERLQNQLNNEQTSLLTEYSNLNSELAQMQQASSSMANLIA 458
Cdd:COG1345  383 YTGSDGTITSRTDGLNKQLKDLDDQIERLEDRLEAREARYRKQFTALDTAMSQLNSQSSYLTQQLA 448
fliD PRK08032
flagellar capping protein; Reviewed
 1-453 3.26e-35

flagellar capping protein; Reviewed


Pssm-ID: 236141 [Multi-domain]  Cd Length: 462  Bit Score: 135.97  E-value: 3.26e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050   1 MSSISA--SAGPLDVQSIVSQLIQADSQPLAQSRQRASTYQSELSVIGQVSSALSALQSAASTLQSGSFLQQfSATSSDS 78
Cdd:PRK08032   1 MASISSlgVGSGLDLDSLLDSLTAAEKKRLTPITNQQSSYTAKLTAYGTLKSALEKFQTANTALNKADLFSS-TKVSSST 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050  79 TVASVSTSSGGAAGTYVLNVSQLAKSRQLvfdQNPNGSAITDQNAAiSGAPSSLSFSVGGASSTVQL---GSNASLSSIA 155
Cdd:PRK08032  80 TAFSATTDSGASAGKYTISVTQLAQAQSL---TTATVSSTKEALGT-SDSTRTITITQPGRKEPLEIdltAGQTSLSGIR 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 156 NSINGAGIGVNASIVQY-NNTYSLVLSSAQAGPGNAFSITAGGADSNNTSGNTLAGLQQSATaaSESANAQSALMTVNGV 234
Cdd:PRK08032 156 DAINKAEGGVSASIIKVgDGEYRLVLTSKDTGTDNAMTISVEGDSKLNDFLNYDSSTGSGNM--TQSVAAQNAKLTVNGI 233

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 235 NVSSDSNSVTSVVNGATINLEK--TGQVTINMAQSTTNITNTLQTFINAYNQVITTTASATQsHTTVGS----TPTNTDI 308
Cdd:PRK08032 234 AIERQSNTITDAPEGITLNLKKvtTGNQTLTITKDTTKAKEAIKDWVDAYNSLQDTFSSLTK-YTAVDAgadqSSSNGAL 312

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 309 SGDLT--SLQEHMASILGTPVkgvdATSSYAYLAQVGITQKA-DGTLTLDSSAFNAALTANPSAVANLF-GNSQNTGVAN 384
Cdd:PRK08032 313 LGDSTlrTIQTQLKSQLANSQ----SSSDFKTLAQIGITQDPsDGKLEIDDDKLTKALKEDPAGVKALFvGDGKKTGITT 388

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 759929050 385 VFNTTINSLLGPNGLITSNQTNLNSKVTAEQQLQERLQNQLNNEQTSLLTEYSNLNSELAQMQQASSSM 453
Cdd:PRK08032 389 QIATNLKSWLSTTGIIKTATDGVNKTLKKLTKQYNAVSDSIDATIARYKAQFTQLDKLMTSLNSTSSYL 457
FliD_C pfam07195
Flagellar hook-associated protein 2 C-terminus; The flagellar hook-associated protein 2 (HAP2 ...
 224-448 3.35e-28

Flagellar hook-associated protein 2 C-terminus; The flagellar hook-associated protein 2 (HAP2 or FliD) forms the distal end of the flagella, and plays a role in mucin specific adhesion of the bacteria. This alignment covers the C-terminal region of this family of proteins.


Pssm-ID: 429344 [Multi-domain]  Cd Length: 230  Bit Score: 111.61  E-value: 3.35e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050  224 AQSALMTVNGVNVSSDSNSVTSVVNGATINLEKT---GQVTINMAQSTTNITNTLQTFINAYNQVITTTASATQSHTTvG 300
Cdd:pfam07195   1 AQNAEFTVDGIKVTSSSNTVTDVIDGVTLNLTKTtegGETTLSVSTDTDGIKEAIKDFVDAYNELITTINELTSYTLD-E 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050  301 STPTNTDISGD--LTSLQEHMASILGTPVkgvdATSSYAYLAQVGITQ-KADGTLTLDSSAFNAALTANPSAVANLFGNS 377
Cdd:pfam07195  80 ETKKAGALAGDstLRSILSQLRSVLSSSV----SDGSISSLADIGITTdSDYGTLELDEEKLDKALKENPDSVAELFTGD 155

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 759929050  378 ---QNTGVANVFNTTINSLLG-PNGLITSNQTNLNSKVTAEQQLQERLQNQLNNEQTSLLTEYSNLNSELAQMQQ 448
Cdd:pfam07195 156 gsrVDTGFAKRLTDLLKSYVGaSNGTIAGRSDSLNKQIKRLDKQIEDLDKRLETLEARLTAQFTAMDTAVSKMNA 230
 
Name Accession Description Interval E-value
FliD COG1345
Flagellar capping protein FliD [Cell motility];
1-458 1.55e-88

Flagellar capping protein FliD [Cell motility];


Pssm-ID: 440956 [Multi-domain]  Cd Length: 450  Bit Score: 277.11  E-value: 1.55e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050   1 MSSISAS--AGPLDVQSIVSQLIQADSQPLAQSRQRASTYQSELSVIGQVSSALSALQSAASTLQSGSFLQQFSATSSDS 78
Cdd:COG1345    1 MASISSLglGSGLDTDSLVSQLMAAERAPLTRLTQQQTSLEAQISAYGTLKSALSSLQDALSALKKSSTFNAKKATSSNE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050  79 TVASVSTSSGGAAGTYVLNVSQLAKSRQLVfdqnpnGSAITDQNAAISGapSSLSFSVG-GASSTVQLGSNASLSSIANS 157
Cdd:COG1345   81 SAVTATATSGAAAGSYSIEVTQLAQAQSLA------SAAFASATTTLGT--GTLTITVGdGKTVTITIDANDTLADIADA 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 158 INGAGIGVNASIVQyNNTYSLVLSSAQAGPGNAFSITAGGADSNNTSGNTlaglqQSATAASESANAQSALMTVNGVNVS 237
Cdd:COG1345  153 INAAGAGVTASIVN-DGSYRLVLTSKKTGAANAITVSVSGDGALSALLGF-----DPASGMTETQAAQDAKLTVNGITIT 226

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 238 SDSNSVTSVVNGATINLEKT--GQVTINMAQSTTNITNTLQTFINAYNQVITTTASATQShTTVGSTPTNTDISGD--LT 313
Cdd:COG1345  227 SSSNTFTDAIDGVTLTLKKVtgGPVTLTVSTDTDAIKKAIKDFVDAYNELIDTINSLTKY-TKDEETAKAGALLGDstLR 305

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 314 SLQEHMASILGTPvkgVDATSSYAYLAQVGITQKADGTLTLDSSAFNAALTANPSAVANLF-GNSQNTGVANVFNTTINS 392
Cdd:COG1345  306 SLQSQLRSALSSP---VSGGGSYKSLSDIGITTDKDGKLELDETKLDKALAEDPDAVAKLFtGDGKTTGIATRLDDLLDS 382

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 759929050 393 LLGPNGLITSNQTNLNSKVTAEQQLQERLQNQLNNEQTSLLTEYSNLNSELAQMQQASSSMANLIA 458
Cdd:COG1345  383 YTGSDGTITSRTDGLNKQLKDLDDQIERLEDRLEAREARYRKQFTALDTAMSQLNSQSSYLTQQLA 448
fliD PRK08032
flagellar capping protein; Reviewed
 1-453 3.26e-35

flagellar capping protein; Reviewed


Pssm-ID: 236141 [Multi-domain]  Cd Length: 462  Bit Score: 135.97  E-value: 3.26e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050   1 MSSISA--SAGPLDVQSIVSQLIQADSQPLAQSRQRASTYQSELSVIGQVSSALSALQSAASTLQSGSFLQQfSATSSDS 78
Cdd:PRK08032   1 MASISSlgVGSGLDLDSLLDSLTAAEKKRLTPITNQQSSYTAKLTAYGTLKSALEKFQTANTALNKADLFSS-TKVSSST 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050  79 TVASVSTSSGGAAGTYVLNVSQLAKSRQLvfdQNPNGSAITDQNAAiSGAPSSLSFSVGGASSTVQL---GSNASLSSIA 155
Cdd:PRK08032  80 TAFSATTDSGASAGKYTISVTQLAQAQSL---TTATVSSTKEALGT-SDSTRTITITQPGRKEPLEIdltAGQTSLSGIR 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 156 NSINGAGIGVNASIVQY-NNTYSLVLSSAQAGPGNAFSITAGGADSNNTSGNTLAGLQQSATaaSESANAQSALMTVNGV 234
Cdd:PRK08032 156 DAINKAEGGVSASIIKVgDGEYRLVLTSKDTGTDNAMTISVEGDSKLNDFLNYDSSTGSGNM--TQSVAAQNAKLTVNGI 233

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 235 NVSSDSNSVTSVVNGATINLEK--TGQVTINMAQSTTNITNTLQTFINAYNQVITTTASATQsHTTVGS----TPTNTDI 308
Cdd:PRK08032 234 AIERQSNTITDAPEGITLNLKKvtTGNQTLTITKDTTKAKEAIKDWVDAYNSLQDTFSSLTK-YTAVDAgadqSSSNGAL 312

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 309 SGDLT--SLQEHMASILGTPVkgvdATSSYAYLAQVGITQKA-DGTLTLDSSAFNAALTANPSAVANLF-GNSQNTGVAN 384
Cdd:PRK08032 313 LGDSTlrTIQTQLKSQLANSQ----SSSDFKTLAQIGITQDPsDGKLEIDDDKLTKALKEDPAGVKALFvGDGKKTGITT 388

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 759929050 385 VFNTTINSLLGPNGLITSNQTNLNSKVTAEQQLQERLQNQLNNEQTSLLTEYSNLNSELAQMQQASSSM 453
Cdd:PRK08032 389 QIATNLKSWLSTTGIIKTATDGVNKTLKKLTKQYNAVSDSIDATIARYKAQFTQLDKLMTSLNSTSSYL 457
FliD_C pfam07195
Flagellar hook-associated protein 2 C-terminus; The flagellar hook-associated protein 2 (HAP2 ...
 224-448 3.35e-28

Flagellar hook-associated protein 2 C-terminus; The flagellar hook-associated protein 2 (HAP2 or FliD) forms the distal end of the flagella, and plays a role in mucin specific adhesion of the bacteria. This alignment covers the C-terminal region of this family of proteins.


Pssm-ID: 429344 [Multi-domain]  Cd Length: 230  Bit Score: 111.61  E-value: 3.35e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050  224 AQSALMTVNGVNVSSDSNSVTSVVNGATINLEKT---GQVTINMAQSTTNITNTLQTFINAYNQVITTTASATQSHTTvG 300
Cdd:pfam07195   1 AQNAEFTVDGIKVTSSSNTVTDVIDGVTLNLTKTtegGETTLSVSTDTDGIKEAIKDFVDAYNELITTINELTSYTLD-E 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050  301 STPTNTDISGD--LTSLQEHMASILGTPVkgvdATSSYAYLAQVGITQ-KADGTLTLDSSAFNAALTANPSAVANLFGNS 377
Cdd:pfam07195  80 ETKKAGALAGDstLRSILSQLRSVLSSSV----SDGSISSLADIGITTdSDYGTLELDEEKLDKALKENPDSVAELFTGD 155

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 759929050  378 ---QNTGVANVFNTTINSLLG-PNGLITSNQTNLNSKVTAEQQLQERLQNQLNNEQTSLLTEYSNLNSELAQMQQ 448
Cdd:pfam07195 156 gsrVDTGFAKRLTDLLKSYVGaSNGTIAGRSDSLNKQIKRLDKQIEDLDKRLETLEARLTAQFTAMDTAVSKMNA 230
PRK12765 PRK12765
flagellar filament capping protein FliD;
14-426 9.57e-27

flagellar filament capping protein FliD;


Pssm-ID: 237194 [Multi-domain]  Cd Length: 595  Bit Score: 113.07  E-value: 9.57e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050  14 QSIVSQLIQADSQ----PLAQSRQRASTYQSELSVIgqvSSALSALQSAASTLQSGSFLQQFSATSSDSTVASVSTSSGG 89
Cdd:PRK12765  19 QDTIDKLKEADQKaqidPITTKIEENTTKQKDLTAI---KTLLSNFKTSVSSLADETSYLKRKVSISDNPPASVTVNSGV 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050  90 AAGTYVLNVSQLAKsrQLVFdQNPNGSAITDQNAAISGAPSSLSFSVGGASSTVQLGSNASLSSIANSINGAGIG-VNAS 168
Cdd:PRK12765  96 NLQSMKINVSQLAQ--KDVY-QSKGFANDSSFVNATLTGETDLTIFSNGKEYTITVDKSTTYRDLADKINEASGGkIQAK 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 169 IVQY--NNTYSLVLSSAQAGPGNAFSITAG--GADSNNTSGNTLAGL---------QQSATAASESA---------NAQS 226
Cdd:PRK12765 173 ILNVggKNPYRLVLQSKETGADNAISFYAGkkDAQSDNDAENIFKSLgwdlddtstIDPGKDKKGYGikdaslhiqTAQN 252

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 227 ALMTVNGVNVSSDSNSVTSVVNGATINLEKTGQVTINMAQSTTNITNTLQTFINAYNQVITTTASATQSHTTVGSTPTNT 306
Cdd:PRK12765 253 AEFTYNGIKITRSSNTIDDLGVGVTLTLNKTGSINFDIQQDTEGVTKAVEDLVDAYNNLVTNLNAATSYNSETGTKGTFQ 332

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 307 DISgDLTSLQEHMASILGTPVkgVDATSSYA-YLAQVGITQKADGTLTLDSSAFNAALTANPSAVANLFGNSQNTGVANV 385
Cdd:PRK12765 333 GVS-EITSIRSSILADLFSQV--VDGTDEDGkSLQDFGLSLNSDGTLSFDSSKFEQKVSEDPDSTQSFFSGSTKYEDISH 409

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*.
gi 759929050 386 FNTTINS--LLGPNGLITSNQTNLNSKVTA---EQQLQERLQNQLN 426
Cdd:PRK12765 410 TGEVVKSgsLNIQTGDLTINGKGINFKTLTgktAEENALNLQNAIN 455
fliD PRK06798
flagellar hook-associated protein 2;
18-447 1.90e-19

flagellar hook-associated protein 2;


Pssm-ID: 180698 [Multi-domain]  Cd Length: 440  Bit Score: 90.22  E-value: 1.90e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050  18 SQLIQADSQPLaqsRQRASTYQSELSVIGQVSSALSALQSAAStlqsgSFLQQFS-----------ATSSDSTVASVSTS 86
Cdd:PRK06798  25 SNFVELELQAL---EMKKTPYTNQKQSLTSEKLLYASLKKEFS-----SFLQTFKdlttfkgnekkVTLSQEGYITVQAD 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050  87 SGGAAGTYVLNVSQLAKSRQLVFDqnpngsAITDQNAAIsgaPSSLSFSVGGASstVQLGSNASLSSIANSINGAGIGVN 166
Cdd:PRK06798  97 ASAIAGTYNITVENLAQRHQITSK------PVPDIDAKI---GVDETIKINGKE--IKVTKDMTYKDLINKINSGNYGVS 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 167 AsivqYNNTYSLVLSSAQAGPGNAFSITaggaDSNNTSGNTLAGLQQSATAASESANAQSALMTVNGVNVSSDSNSVTSv 246
Cdd:PRK06798 166 A----YTLGNKIFFTSTTEGEEGSIKFT----DGDSGFLEAIGLVQSSGVAANDITAAENAEYTINGIKGTSATNKIET- 236

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 247 VNGATINLEKTGQVTINMAQSTTNITNT---LQTFINAYNQVITTTASATQSHTTVGSTPTNTDISGDLTSLQEHmasil 323
Cdd:PRK06798 237 IPGVTINLKKETTEPIKLTIQDSNVKDAanlIKKMVDEYNKAVSTVDLFAGKGGALQGSAIMFSINRAMNNVFTF----- 311

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 324 gtpvkgvdaTSSYAYLAQVGITQKADGTLTLDSSAFNAALTANPSAVANLFGNSqnTGVANVFNTTINSLLGPNGLITSN 403
Cdd:PRK06798 312 ---------SQDGNYLFSFGIQVDKEGTMKVDEEALKKALKENPDAAKQFFFGI--NGLGKEMEKSLDKIFGDEGIIGER 380

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....
gi 759929050 404 QTNLNSKVTAEQQLQERLQNQLNNEQTSLLTEYSNLNSELAQMQ 447
Cdd:PRK06798 381 SKSIDNRVSKLDLKITDIDTQNKQKQDNIVDKYQKLESTLAALD 424
fliD PRK07737
flagellar hook-associated protein 2;
1-457 1.10e-18

flagellar hook-associated protein 2;


Pssm-ID: 236082 [Multi-domain]  Cd Length: 501  Bit Score: 88.32  E-value: 1.10e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050   1 MSSISASAGPLDVQSIVSQLIQADSQPLAQSRQRASTYQSELSVIGQVSSALSALQSA-ASTLQSGSFLQQFSATSSDST 79
Cdd:PRK07737   2 VMRITGLASGMDIDDIVSKLMKTERAPLDKLTQKKQTLEWQRDSYREMNTLLKDLDDYiFNNITRQSTYLKKTVTSSNES 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050  80 VASVSTSSGGAAGTYVLNVSQLAKSRQLVFDQNPNGSaitdqnaaiSGAPSSLSFSVGGASST------VQLGSNASLSS 153
Cdd:PRK07737  82 VVTATASSSAANGSTTMQVTQLATAATWKSSAKTSFY---------TGADQTLTFNVTNPGETtaktveISVKQTDTLDD 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 154 IANSINGAGIGVNASIVQYNN----TYSLVLSSAQAGPGNAFSITAGGADS--NNTSGNTLAGLQQSATAASESANAQsa 227
Cdd:PRK07737 153 VISKLNSSDLGVSAFKDKIWNgteyVETIAITSKATGAGASIQAADGATASffSQQLGFTNLDADNELTAKTEGQNAQ-- 230

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 228 lMTVNGVNVSSDSNSVTsvVNGATINLEKT--GQVTINMAQSTTNITNTLQTFINAYNQVITTTASATQSHTTVGSTPTN 305
Cdd:PRK07737 231 -VTINGLQTERTSNTFT--INGVTYTLKNTtaGTVTLSVATDVDGIFNKIKDFVDKYNELIDKINAKLKEERYRDYPPLT 307

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 306 TDISGDLTSLQ-----------------------EHMASILGTPVKGVDATSSyaYLAQVGITQKAD----GTLTLDSSA 358
Cdd:PRK07737 308 DEQKEAMTEKQielweekaksgllrgdsilssalSKMRMDFYTKVEGIDGGFS--QLAQIGITTSSNyldgGKLEIDETK 385

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 359 FNAALTANPSAVANLF---GNSQN---TGVANVFNTTINSLLGP------NGLITSNQTNLNSKVTAEQQLQERLQNQLN 426
Cdd:PRK07737 386 LRQKIKENPDAVYQLFnsgGSSSNyneKGIARRLRDTLKETIKSieqkagNTTMTNQQFAIGKDLNQIETQIDRFQDRLK 465

                        490       500       510
                 ....*....|....*....|....*....|.
gi 759929050 427 NEQTSLLTEYSNLNSELAQMQQASSSMANLI 457
Cdd:PRK07737 466 QIEDRYYKKFSAMEKAIQKANEQSMYLMNAL 496
fliD PRK06664
flagellar hook-associated protein FliD; Validated
 218-456 2.10e-17

flagellar hook-associated protein FliD; Validated


Pssm-ID: 235848 [Multi-domain]  Cd Length: 661  Bit Score: 84.82  E-value: 2.10e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 218 ASESANAQSALMTVNGVNVSSDSNSVTSVVNGATINLEKT--GQVTINMAQSTTNITNTLQTFINAYNQVIT-------T 288
Cdd:PRK06664 384 VNAKSEAKDAKIKFDGVEVERDKNEITDLIPGVTLNLHKAseDPVTLKIEPDYEKIKNLIIEFVAAYNEVLAeinivtsN 463

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 289 TASATQSHTTVGSTPTNTDISGDLTSLQ-EH--------MASILGTPVKgVDATSSYAYLAQVGITQKA---------DG 350
Cdd:PRK06664 464 EKSSIIEELTYLSDEEKEEAYKNLGLLRgEFtllrlksrLKTIISSSYP-TSDDNAFRMLNQIGISTNSvgssggliqDG 542

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 351 TLTLDSSAFNAALTANPSAVANLFGNSQN------TGVANVFNTTINSLLGPNGLITSNQTNLNSKVTAEQQLQERLQNQ 424
Cdd:PRK06664 543 YLELDEKKLDEVLKENPDSVRELFAFDSNgdavmdNGVAKMLLEYLSPYTQAGGIIYNKVKGLDERIADNNKKIEEYEKK 622

                        250       260       270
                 ....*....|....*....|....*....|..
gi 759929050 425 LNNEQTSLLTEYSNLNSELAQMQQASSSMANL 456
Cdd:PRK06664 623 LESKERKLKGKYLTMDQTVKKMKEQSNYLKNF 654
FliD_N pfam02465
Flagellar hook-associated protein 2 N-terminus; The flagellar hook-associated protein 2 (HAP2 ...
 11-104 1.41e-14

Flagellar hook-associated protein 2 N-terminus; The flagellar hook-associated protein 2 (HAP2 or FliD) forms the distal end of the flagella, and plays a role in mucin specific adhesion of the bacteria. This alignment covers the N-terminal region of this family of proteins.


Pssm-ID: 460566 [Multi-domain]  Cd Length: 97  Bit Score: 69.13  E-value: 1.41e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050   11 LDVQSIVSQLIQADSQPLAQSRQRASTYQSELSVIGQVSSALSALQSAASTLQSGSFLQQFSATSSDSTVASVSTSSGGA 90
Cdd:pfam02465   3 LDTDSIVDQLMAAERAPLDRLEQQKTTLEWKQSAYGELNSKLSSLQSALKALSSSSTFNAKKATSSNESVVTATASSGAA 82

                          90
                  ....*....|....
gi 759929050   91 AGTYVLNVSQLAKS 104
Cdd:pfam02465  83 AGSYSIEVTQLAQA 96
fliD PRK08453
flagellar filament capping protein FliD;
211-453 3.75e-12

flagellar filament capping protein FliD;


Pssm-ID: 181432 [Multi-domain]  Cd Length: 673  Bit Score: 68.33  E-value: 3.75e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 211 LQQSATAASESANAQSALMTVNGVNVSSDSNSVTSVVNGATINLEKTGQ----VTINMAQSTTNITNTLQTFINAYNQVI 286
Cdd:PRK08453 419 SQETLFMSKNLQKASDAKFTYNGVSITRPTNEVNDVISGVNITLEQTTEpnkpAIISVSRDNQAIIDSLKEFVKAYNELI 498

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 287 TTTASATQSHTtvgstptNTDISG------DLTSLQEHMASILGTPVKGVDATSSyayLAQVGITQKADGTLTLDSSAFN 360
Cdd:PRK08453 499 PKLDEDTRYDA-------DTKIAGifngvgDIRSIRSSLNNVFSYSVHTDNGVES---LMKYGLSLDEKGVMTLDEAKLS 568

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 361 AALTANPSAVANLFGNSQNT----------GVANVFNTTINSLL-GPNGLITSNQTNLNSKVTAEQQLQERLQNQLNNEQ 429
Cdd:PRK08453 569 SALNSDPKATQDFFYGSDSKdmggreihqeGIFSKFNQVIANLIdGGNAKLKIYEDSLTRDAKSLTKDKENAQELLKTRY 648

                        250       260
                 ....*....|....*....|....
gi 759929050 430 TSLLTEYSNLNSELAQMQQASSSM 453
Cdd:PRK08453 649 DIMAERFAAYDSQISKANQKFNSV 672
fliD PRK08724
flagellar filament capping protein FliD;
9-220 1.18e-08

flagellar filament capping protein FliD;


Pssm-ID: 236335 [Multi-domain]  Cd Length: 673  Bit Score: 57.19  E-value: 1.18e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050   9 GPLDVQSIVSQLIQADSQPLAQ--SRQRaSTYQSELSVIGQVSSALSALQSAASTLQSGSFLQQFSATSSDSTVASVSTS 86
Cdd:PRK08724  10 GGMDINSMVSKIVDAERVPKQQriDNER-TDIDTSISAYGRLRESLDTMKNLMTNFRQEKAFAVRTVDTSDEDVVSATAT 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050  87 SGGAAGTYVLNVSQLAKSRQLvfdqnpnGSAITDQNAAIsgAPSSLSFSVGGASSTVQLGSNASLSSIANSINGAG--IG 164
Cdd:PRK08724  89 TDAIAGKYAIDVLQLAQSHKV-------ASDVLDEDAKF--GPGKLQISLGDKSFTLDVVGNSKLVDIVRGINGAKsnPG 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 759929050 165 VNASIVQYNNTYSLVLSSAQAGPGNAFSITAGGADSN-------NTSGNTLAGLQQSATAASE 220
Cdd:PRK08724 160 VRASIINDVEGPRLILASNVSGKDNQIKISVDAEYGNplkrfeyKTLEDRVRALEKARAAAQQ 222
fliD PRK08724
flagellar filament capping protein FliD;
219-453 2.87e-07

flagellar filament capping protein FliD;


Pssm-ID: 236335 [Multi-domain]  Cd Length: 673  Bit Score: 52.95  E-value: 2.87e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 219 SESANAQSALMTVNGV-NVSSDSNSVTSVVNGATINLEKTGQ-----VTINMAQSTTNITNTLQTFINAYNQVITTTASA 292
Cdd:PRK08724 433 TEVQSAQDSMVVLDGVaQLSSNNNVIEDAIEGVDLTLKGKTDknkppAEIGVEYDRQSVRNDIEQFVAAYNQFYQTSKAL 512

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 293 TQSHTTVG-STPtntdISGDLT--SLQEHMASILGTPVKgvDATSSYAYLAQVGITQKADGTLTLDSSAFNAALTANPSA 369
Cdd:PRK08724 513 SGVDPATGqKGP----LAGDSTvrSADSRLKSVFSSSIE--QAPENLKSLTEFGITTTRQGTLEINYDMLDRQLNNNFNK 586

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 370 VANLFGNsqNTGVANVFNTTINSLLGPNGLITsnqtnlnskvTAEQQLQErlQN-QLNNEQTSLLTEYSNL----NSELA 444
Cdd:PRK08724 587 LEEFFGG--NTGFAKRVEDAIQSMTGVTGSIR----------TREKSLRE--QNyRLNDDQVALDRRMESLekrtHAKFA 652


                 ....*....
gi 759929050 445 QMQQASSSM 453
Cdd:PRK08724 653 AMQDATGKM 661
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
 70-413 4.15e-05

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 46.30  E-value: 4.15e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050   70 QFSATSSDSTVASVSTSSGGAAGTYVLNVSQLAKSRQLVFDQNPNGSAITDQNAAISGAPSSLSFSVGGASSTVQLGSNA 149
Cdd:COG3210   773 TLANANGNTSAGATLDNAGAEISIDITADGTITAAGTTAINVTGSGGTITINTATTGLTGTGDTTSGAGGSNTTDTTTGT 852

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050  150 SLSSIANSINGAGIGVNASIVQYNNTYSLVLSSAQAGPGNAFSITAGGADSNNTSGNTLAGLQQSATAASESANAQSALM 229
Cdd:COG3210   853 TSDGASGGGTAGANSGSLAATAASITVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAA 932

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050  230 TVNGVNVSSDSNSVTSVVNGATINLEKTGQVTINMAQSTTNITNTLQTFINAYNQVITTTASATQSHTTVGSTPTNTDIS 309
Cdd:COG3210   933 AGGTGAGNGTTALSGTQGNAGLSAASASDGAGDTGASSAAGSSAVGTSANSAGSTGGVIAATGILVAGNSGTTASTTGGS 1012

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050  310 GDLTSLQEHMASILGTPVKGVDATSSYAYLAQVGITQKADGTLTLDSSAFNAALTANPSAVANLFGNSQNTGVANVFNTT 389
Cdd:COG3210  1013 GAIVAGGNGVTGTTGTASATGTGTAATAGGQNGVGVNASGISGGNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTH 1092

                         330       340
                  ....*....|....*....|....
gi 759929050  390 INSLLGPNGLITSNQTNLNSKVTA 413
Cdd:COG3210  1093 TLGGITNGGATGTSGGTTTSTGGV 1116
Chi1 COG3469
Chitinase [Carbohydrate transport and metabolism];
112-318 5.32e-04

Chitinase [Carbohydrate transport and metabolism];


Pssm-ID: 442692 [Multi-domain]  Cd Length: 534  Bit Score: 42.43  E-value: 5.32e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 112 NPNGSAITDQNAAISGAPSSLSFSVGGASSTVQLGSNA-SLSSIANSINGAGIGVNASIVQYNNTYSLVLSSAQAGPGNA 190
Cdd:COG3469    9 SPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTgSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATAAAAA 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050 191 FSITAGGADSNNTSGNTLAGLQQSATAASESANAQSALMTVNGVNVSSDSNSVTSVVNGATINLEKTGQVTINmAQSTTN 270
Cdd:COG3469   89 ATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTETATG-GTTTTS 167

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 759929050 271 ITNTLQTFINAYNQVITTTASATQSHTTVGSTPTNTDISGDLTSLQEH 318
Cdd:COG3469  168 TTTTTTSASTTPSATTTATATTASGATTPSATTTATTTGPPTPGLPKH 215
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
 43-410 1.12e-03

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 41.68  E-value: 1.12e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050   43 SVIGQVSSALSALQSAASTLQSGSFLQQFSATSSDSTVASVSTSSGGAAGTYVLNVSQLAKSRQLVFDQNPNGSAITDQN 122
Cdd:COG3210   396 STTVLGSGSLATGNTGTTIAGNGGSANAGGFTTTGGVLGITGNGTVTGGTIGGLTGSGTTNGAGLSGNTDVSGTGTVTNS 475

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050  123 AAISGAPSSLSFSVGGASSTvQLGSNASLSSIANSINGAGIGVNASIVQYNNTYSLVLSSAQAGPGNAFSITAGGADSNN 202
Cdd:COG3210   476 AGNTTSATTLAGGGIGTVTT-NATISNNAGGDANGIATGLTGITAGGGGGGNATSGGTGGDGTTLSGSGLTTTVSGGASG 554

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050  203 TSGNTLAGLQQSATAASESANAQSALMTVNGVNVSSDSNSVTSVVNGATINLEKTGQVTINMAQSTTNITNTLQTFINAY 282
Cdd:COG3210   555 TTAASGSNTANTLGVLAATGGTSNATTAGNSTSATGGTGTNSGGTVLSIGTGSAGATGTITLGAGTSGAGANATGGGAGL 634

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 759929050  283 NQVITTTASATQSHTTVGSTPTNTDISGDLTSLQEHMASILGTPVKGVDATSSYAYLAQVGITQKADGTLTLDSSAFNAA 362
Cdd:COG3210   635 TGSAVGAALSGTGSGTTGTASANGSNTTGVNTAGGTGGGTTGTVTSGATGGTTGTTLNAATGGTLNNAGNTLTISTGSIT 714

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|...
gi 759929050  363 LTANPSAVANLFGN-----SQNTGVANVFNTTINSLLGPNGLITSNQTNLNSK 410
Cdd:COG3210   715 VTGQIGALANANGDtvtfgNLGTGATLTLNAGVTITSGNAGTLSIGLTANTTA 767
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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