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Conserved domains on  [gi|762937967|ref|WP_043886216|]
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DUF4046 domain-containing protein [Paenibacillus polymyxa]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 19-108 8.22e-55

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


:

Pssm-ID: 404192  Cd Length: 90  Bit Score: 179.06  E-value: 8.22e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762937967   19 IISMYDAVIEGKLAKLPHGFWGNHEEEVQHRLKLCFRYVVLQKLKIKPQEIPFEVQQSFLIKYKLYSAVYKYQSKRLKEL 98
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNHEEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAVYQRQSKGLTEL 80

                          90
                  ....*....|
gi 762937967   99 LNDIFPEIRY 108
Cdd:pfam13255  81 LIDIFPEIGY 90
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 437-526 2.46e-53

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


:

Pssm-ID: 404192  Cd Length: 90  Bit Score: 175.21  E-value: 2.46e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762937967  437 IINVYDAAIEGKLTQLPHGFWGNDEEEVQHRLKLCLRHVVLQKLNMKPQEIHSEVKRPFLIKYKLYYYAYRRQSKGLKEL 516
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNHEEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAVYQRQSKGLTEL 80

                          90
                  ....*....|
gi 762937967  517 LSDTFPEIDN 526
Cdd:pfam13255  81 LIDIFPEIGY 90
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 328-416 1.49e-52

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


:

Pssm-ID: 404192  Cd Length: 90  Bit Score: 173.28  E-value: 1.49e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762937967  328 IINIYDAAIEGKIDKLPRNFWGNHEEEVQRRFKLCFRYVVLQKLKIAPQEILSEVTNPFLIRYKLDYVVYKRQSKRLSEL 407
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNHEEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAVYQRQSKGLTEL 80


                  ....*....
gi 762937967  408 LLDIFPEIR 416
Cdd:pfam13255  81 LIDIFPEIG 89
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 115-203 8.67e-50

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


:

Pssm-ID: 404192  Cd Length: 90  Bit Score: 165.96  E-value: 8.67e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762937967  115 IINMYVAALEGKITHLPHGFWGDNEDDIQHRLELCIHYLVLQKLKIKPQEILSEVTSPFLMKYKLHYA-YKRQSKRLTDL 193
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNHEEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAvYQRQSKGLTEL 80

                          90
                  ....*....|
gi 762937967  194 LFDVFPEIGH 203
Cdd:pfam13255  81 LIDIFPEIGY 90
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 221-308 5.56e-47

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


:

Pssm-ID: 404192  Cd Length: 90  Bit Score: 158.26  E-value: 5.56e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762937967  221 IINIYDAALEGKIGQWPNGFWRD-KEVLQHRLKLCLRYVVLQKLNIKSHEILSKVKRPFLVKYKLYYA-FQLQSKRLTDL 298
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNhEEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAvYQRQSKGLTEL 80

                          90
                  ....*....|
gi 762937967  299 LFDVFPEIGH 308
Cdd:pfam13255  81 LIDIFPEIGY 90
 
Name Accession Description Interval E-value
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 19-108 8.22e-55

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


Pssm-ID: 404192  Cd Length: 90  Bit Score: 179.06  E-value: 8.22e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762937967   19 IISMYDAVIEGKLAKLPHGFWGNHEEEVQHRLKLCFRYVVLQKLKIKPQEIPFEVQQSFLIKYKLYSAVYKYQSKRLKEL 98
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNHEEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAVYQRQSKGLTEL 80

                          90
                  ....*....|
gi 762937967   99 LNDIFPEIRY 108
Cdd:pfam13255  81 LIDIFPEIGY 90
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 437-526 2.46e-53

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


Pssm-ID: 404192  Cd Length: 90  Bit Score: 175.21  E-value: 2.46e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762937967  437 IINVYDAAIEGKLTQLPHGFWGNDEEEVQHRLKLCLRHVVLQKLNMKPQEIHSEVKRPFLIKYKLYYYAYRRQSKGLKEL 516
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNHEEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAVYQRQSKGLTEL 80

                          90
                  ....*....|
gi 762937967  517 LSDTFPEIDN 526
Cdd:pfam13255  81 LIDIFPEIGY 90
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 328-416 1.49e-52

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


Pssm-ID: 404192  Cd Length: 90  Bit Score: 173.28  E-value: 1.49e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762937967  328 IINIYDAAIEGKIDKLPRNFWGNHEEEVQRRFKLCFRYVVLQKLKIAPQEILSEVTNPFLIRYKLDYVVYKRQSKRLSEL 407
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNHEEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAVYQRQSKGLTEL 80


                  ....*....
gi 762937967  408 LLDIFPEIR 416
Cdd:pfam13255  81 LIDIFPEIG 89
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 115-203 8.67e-50

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


Pssm-ID: 404192  Cd Length: 90  Bit Score: 165.96  E-value: 8.67e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762937967  115 IINMYVAALEGKITHLPHGFWGDNEDDIQHRLELCIHYLVLQKLKIKPQEILSEVTSPFLMKYKLHYA-YKRQSKRLTDL 193
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNHEEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAvYQRQSKGLTEL 80

                          90
                  ....*....|
gi 762937967  194 LFDVFPEIGH 203
Cdd:pfam13255  81 LIDIFPEIGY 90
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 221-308 5.56e-47

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


Pssm-ID: 404192  Cd Length: 90  Bit Score: 158.26  E-value: 5.56e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762937967  221 IINIYDAALEGKIGQWPNGFWRD-KEVLQHRLKLCLRYVVLQKLNIKSHEILSKVKRPFLVKYKLYYA-FQLQSKRLTDL 298
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNhEEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAvYQRQSKGLTEL 80

                          90
                  ....*....|
gi 762937967  299 LFDVFPEIGH 308
Cdd:pfam13255  81 LIDIFPEIGY 90
 
Name Accession Description Interval E-value
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 19-108 8.22e-55

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


Pssm-ID: 404192  Cd Length: 90  Bit Score: 179.06  E-value: 8.22e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762937967   19 IISMYDAVIEGKLAKLPHGFWGNHEEEVQHRLKLCFRYVVLQKLKIKPQEIPFEVQQSFLIKYKLYSAVYKYQSKRLKEL 98
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNHEEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAVYQRQSKGLTEL 80

                          90
                  ....*....|
gi 762937967   99 LNDIFPEIRY 108
Cdd:pfam13255  81 LIDIFPEIGY 90
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 437-526 2.46e-53

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


Pssm-ID: 404192  Cd Length: 90  Bit Score: 175.21  E-value: 2.46e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762937967  437 IINVYDAAIEGKLTQLPHGFWGNDEEEVQHRLKLCLRHVVLQKLNMKPQEIHSEVKRPFLIKYKLYYYAYRRQSKGLKEL 516
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNHEEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAVYQRQSKGLTEL 80

                          90
                  ....*....|
gi 762937967  517 LSDTFPEIDN 526
Cdd:pfam13255  81 LIDIFPEIGY 90
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 328-416 1.49e-52

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


Pssm-ID: 404192  Cd Length: 90  Bit Score: 173.28  E-value: 1.49e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762937967  328 IINIYDAAIEGKIDKLPRNFWGNHEEEVQRRFKLCFRYVVLQKLKIAPQEILSEVTNPFLIRYKLDYVVYKRQSKRLSEL 407
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNHEEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAVYQRQSKGLTEL 80


                  ....*....
gi 762937967  408 LLDIFPEIR 416
Cdd:pfam13255  81 LIDIFPEIG 89
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 115-203 8.67e-50

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


Pssm-ID: 404192  Cd Length: 90  Bit Score: 165.96  E-value: 8.67e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762937967  115 IINMYVAALEGKITHLPHGFWGDNEDDIQHRLELCIHYLVLQKLKIKPQEILSEVTSPFLMKYKLHYA-YKRQSKRLTDL 193
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNHEEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAvYQRQSKGLTEL 80

                          90
                  ....*....|
gi 762937967  194 LFDVFPEIGH 203
Cdd:pfam13255  81 LIDIFPEIGY 90
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 221-308 5.56e-47

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


Pssm-ID: 404192  Cd Length: 90  Bit Score: 158.26  E-value: 5.56e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762937967  221 IINIYDAALEGKIGQWPNGFWRD-KEVLQHRLKLCLRYVVLQKLNIKSHEILSKVKRPFLVKYKLYYA-FQLQSKRLTDL 298
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNhEEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAvYQRQSKGLTEL 80

                          90
                  ....*....|
gi 762937967  299 LFDVFPEIGH 308
Cdd:pfam13255  81 LIDIFPEIGY 90
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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