|
Name |
Accession |
Description |
Interval |
E-value |
| RND_permease_2 |
NF033617 |
multidrug efflux RND transporter permease subunit; |
4-1006 |
0e+00 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 411236 [Multi-domain] Cd Length: 1009 Bit Score: 1492.97 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 4 TDVFIKRPVLAVSISFLIALLGLQAVFKMQVSEYPEMTNTVITVSTSYYGASADLIQGFITQPLEQAVAQADNIDYMTSQ 83
Cdd:NF033617 1 SDVFIKRPVATLLLSLLILLLGLLAFRKLPVREYPEVDFPTITVSTSYPGASPELMQSSITQPLEQQLAQIEGIDEMTSQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 84 SVLGTSKITVNMKLNTDPNAALSDVLAKTNSVRSQLPKEAEDPTVTMSTGS-TTAVLYIGFTSHELDSSQITDYLQRVIN 162
Cdd:NF033617 81 SSLGYSTITLQFRLGTDLDVALSEVQAAINAAQSLLPSEAPDPPVYRKANSaDTPIMYIGLTSEEMPRGQLTDYAERVLA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 163 PQLYSINGISSIDLYGGMKYALRVWLDPAKMAAFNLTATDVMGVLSANNYQSATGQAVGEFVLFNGSADTQVSNVDELKN 242
Cdd:NF033617 161 PKLSQINGVGSVDVSGGQRPAMRVWLDPEKMAARGLTADDVRSALNSNNVNSPKGAVRGDSVVSTVRANDQLKTAEDYED 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 243 LVVK-NENGSVTRLSDIANVTLAKSHDTYRASANGQEAVVAAINAAPSANPINIAKDVLDILPELKRNMPSNISMNVMYD 321
Cdd:NF033617 241 LVIKyADNGAPVRLGDVATVELGAENVRNRAWANGVPAVVLGINRQPGANPIEVADEIRALLPELQETLPKNIKVNVLYD 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 322 STVAINESIHEVIKTIVEAAVIVLVVITLFLGSFRAVIIPIVTIPLSLIGVAMVMQAMGFSWNLMTLLAMVLAIGLVVDD 401
Cdd:NF033617 321 RTRFIRASIDEVESTLLEAVALVILVVFLFLRNLRATLIPAVTVPLSLIGTFAVMYLFGFSINLLTLMALVLAIGLVVDD 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 402 AIVVLENVDRHIKEGESPFRAAIIGTREIAVPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGIIALTLS 481
Cdd:NF033617 401 AIVVVENIHRHIEEGESPLEAALKGAREIGFTVIAMTLTLVAVYLPILFMGGLTGRLFREFAVTLAGAVIISGIVALTLT 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 482 PMMCSKMLKANEKPNRFEQKVHHVLDKMTNRYEKMLGAVMQHRPVVIAFAIIVFGSLPVLFKFIPSELAPSEDKGVVMLL 561
Cdd:NF033617 481 PMMCSRLLKANEKPGRFARAVDRFFDGLTARYGRGLKWVLKHRPLTLVVALATLALLPLLYVFIPKELAPSEDRGVIFGM 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 562 GTGPSNANLDYLSNTMADVNKILSDQPEVQFAQVFT---GVPNSNQAFGIASMVPWSQREASQAEVTTRVGNLVKDIPGM 638
Cdd:NF033617 561 IQAPQSISLDYMSAKMRDVEKILSSDPEVQSLTSFNgvgGNPGDNTGFGIINLKPWDERDVSAQEIIDRLRPKLAKVPGM 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 639 AVTAFQMPELP-GAGSGLPIQFVITTPNAFESLFTIATDVLTEVQSSPLFVYSNLDLNYDSATMKINIDKDKAGAYGVTM 717
Cdd:NF033617 641 DLFLFPLQDLPgGAGSSLPQYQVTLTPSDYDSLFTWAEKLKEKLRKSPQFADVDSDLQDKGPELNVDIDRDKAARLGISM 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 718 QDIGVTLGTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMNNYYVRGADGKAVPLGSLISIDVIAEPRALPHFNQLN 797
Cdd:NF033617 721 QDIGSTLEVAFGQRQVNTIYTDGNQYKVVLEVDRRYRLNPEALNQIYVRSNDGKLVPLSTLAKIEERAAPLSLNHFNQFN 800
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 798 SATVGAVPSPGTAMGDAINWFENIAETKLPKGYNHDYMGEARQYVTEGSALYATFGLALAIIFLVLAIQFESLKDPIVIM 877
Cdd:NF033617 801 SATLSFNLAPGVSLGEAIEALDQAAKELLPSGISGSFQGAARAFQEEGSSLLFLFLLALAAIYLVLAIQYESFVDPLTIL 880
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 878 VSVPLAICGALIALAWGMATMNIYSQVGLITLVGLITKHGILICEVAKEEQLHNKLSRIDAVMAAAKVRLRPILMTTAAM 957
Cdd:NF033617 881 STVPLAGCGALLALALGGQSMNIYAQIGLITLIGLVKKNGILMVEFANELQRHQGLSRREAIYQAAALRLRPILMTTLAM 960
|
970 980 990 1000
....*....|....*....|....*....|....*....|....*....
gi 764441443 958 IAGLIPLMYATGAGAAQRFSIGIVIVAGLAIGTIFTLFVLPVIYSYLAE 1006
Cdd:NF033617 961 LLGAIPLMLSTGAGAESRFPLGIVIVGGLGVGTLFTLFVLPVVYLLLAR 1009
|
|
| AcrB |
COG0841 |
Multidrug efflux pump subunit AcrB [Defense mechanisms]; |
1-1011 |
0e+00 |
|
Multidrug efflux pump subunit AcrB [Defense mechanisms];
Pssm-ID: 440603 [Multi-domain] Cd Length: 1015 Bit Score: 1102.08 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 1 MRFTDVFIKRPVLAVSISFLIALLGLQAVFKMQVSEYPEMTNTVITVSTSYYGASADLIQGFITQPLEQAVAQADNIDYM 80
Cdd:COG0841 1 MNLSRFFIRRPVAAIVLSLLILLAGLLAYLRLPVEQFPDIDPPTVTVSTTYPGASPEEVESTVTTPIEEALNGVEGIKYI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 81 TSQSVLGTSKITVNMKLNTDPNAALSDVLAKTNSVRSQLPKEAEDPTVTMSTGSTTAVLYIGFTSHELDSSQITDYLQRV 160
Cdd:COG0841 81 TSTSSEGSSSITVEFELGTDIDEALVDVQNAVDRARSDLPEDVEPPGVTKVNPSDFPVMVLALSSDDLDELELSDYAERN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 161 INPQLYSINGISSIDLYGGMKYALRVWLDPAKMAAFNLTATDVMGVLSANNYQSATGQAVGEFVLFNGSADTQVSNVDEL 240
Cdd:COG0841 161 IKDRLERVPGVGQVQIFGGREREIRIWLDPDKLAAYGLTLADVANAIRAQNVDVPAGRIGGGDREYTVRTNGRLKTPEEF 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 241 KNLVVKNENGSVTRLSDIANVTLAKSHDTYRASANGQEAVVAAINAAPSANPINIAKDVLDILPELKRNMPSNISMNVMY 320
Cdd:COG0841 241 ENIVIRTNDGSVVRLGDVARVEDGAEDYRSIARLNGKPAVGLAIQKQPGANALEVADAVRAKLEELQASLPEGVELTIVY 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 321 DSTVAINESIHEVIKTIVEAAVIVLVVITLFLGSFRAVIIPIVTIPLSLIGVAMVMQAMGFSWNLMTLLAMVLAIGLVVD 400
Cdd:COG0841 321 DQSEFIRASIEEVVKTLLEAILLVVLVVFLFLRSWRATLIPAVAIPVSLIGTFAVMYLLGFSLNILTLFALVLAIGIVVD 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 401 DAIVVLENVDRHIKEGESPFRAAIIGTREIAVPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGIIALTL 480
Cdd:COG0841 401 DAIVVVENIERHMEEGLSPLEAAIKGAREVAGAVIASTLTLVAVFLPLAFMGGITGQLFRQFALTVAIALLISLFVALTL 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 481 SPMMCSKMLKAN--EKPNRFEQKVHHVLDKMTNRYEKMLGAVMQHRPVVIAFAIIVFGSLPVLFKFIPSELAPSEDKGVV 558
Cdd:COG0841 481 TPALCARLLKPHpkGKKGRFFRAFNRGFDRLTRGYGRLLRWALRHRKLTLLVALALLALSVLLFGRLPTEFFPEEDQGQI 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 559 MLLGTGPSNANLDYLSNTMADVNKILSDQPEVQFAQVFTGV----PNSNQAFGIASMVPWSQREASQAEVTTRVGNLVKD 634
Cdd:COG0841 561 IVSVQLPPGTSLERTEAVVRQVEEILLEVPEVESVFSVVGFsgggSGSNSGTIFVTLKPWDERDRSADEIIARLREKLAK 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 635 IPGMAVTAFQMPElPGAGSGLPIQFVITTPNaFESLFTIATDVLTEVQSSPLFVYSNLDLNYDSATMKINIDKDKAGAYG 714
Cdd:COG0841 641 IPGARVFVFQPPA-GGLGSGAPIEVQLQGDD-LEELAAAAEKLLAALRQIPGLVDVRSDLQLGKPELQLDIDREKAAALG 718
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 715 VTMQDIGVTLGTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMNNYYVRGADGKAVPLGSLISIDVIAEPRALPHFN 794
Cdd:COG0841 719 VTVADVASTLRAALGGRYVNDFNRGGREYDVRVQAPEEDRNSPEDLENLYVRTPDGEMVPLSSVATIEEGTGPSSINRYN 798
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 795 QLNSATVGAVPSPGTAMGDAINWFENIA-ETKLPKGYNHDYMGEARQYVTEGSALYATFGLALAIIFLVLAIQFESLKDP 873
Cdd:COG0841 799 GQRSVTVSANLAPGVSLGEALAAIEELAaELKLPPGVSIEFTGQAEEEQESFSSLGLAFLLALLLVYLVLAAQFESFIQP 878
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 874 IVIMVSVPLAICGALIALAWGMATMNIYSQVGLITLVGLITKHGILICEVAKEEQlHNKLSRIDAVMAAAKVRLRPILMT 953
Cdd:COG0841 879 LIILLTVPLALIGALLGLLLTGTPLNIYSQIGLIMLIGIVVKNAILLVDFANQLR-EEGMSLREAILEAARLRLRPILMT 957
|
970 980 990 1000 1010
....*....|....*....|....*....|....*....|....*....|....*...
gi 764441443 954 TAAMIAGLIPLMYATGAGAAQRFSIGIVIVAGLAIGTIFTLFVLPVIYSYLAEKHKPL 1011
Cdd:COG0841 958 SLATILGLLPLALGTGAGAEFRQPLGIAVIGGLLFSTLLTLFVVPVLYVLLDRLRRRL 1015
|
|
| PRK09579 |
PRK09579 |
multidrug efflux RND transporter permease subunit; |
1-1010 |
0e+00 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 169983 [Multi-domain] Cd Length: 1017 Bit Score: 1058.67 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 1 MRFTDVFIKRPVLAVSISFLIALLGLQAVFKMQVSEYPEMTNTVITVSTSYYGASADLIQGFITQPLEQAVAQADNIDYM 80
Cdd:PRK09579 1 MAFTDPFIRRPVLASVVSLLIVLLGFQAWSKLQIRQYPQMENALITVTTAYPGANAETIQGYITQPLQQSLASAEGIDYM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 81 TSQSVLGTSKITVNMKLNTDPNAALSDVLAKTNSVRSQLPKEAEDPTVTMSTGSTTAVLYIGFTSHELDSSQITDYLQRV 160
Cdd:PRK09579 81 TSVSRQNFSIISIYARIGADSDRLFTELLAKANEVKNQLPQDAEDPVLSKEAADASALMYISFYSEEMSNPQITDYLSRV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 161 INPQLYSINGISSIDLYGGMKYALRVWLDPAKMAAFNLTATDVMGVLSANNYQSATGQAVGEFVLFNGSADTQVSNVDEL 240
Cdd:PRK09579 161 IQPKLATLPGMAEAEILGNQVFAMRLWLDPVKLAGFGLSAGDVTQAVRRYNFLSAAGEVKGEYVVTSINASTELKSAEAF 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 241 KNLVVKNENGSVTRLSDIANVTL-AKSHDTYrASANGQEAVVAAINAAPSANPINIAKDVLDILPELKRNMPSNISMNVM 319
Cdd:PRK09579 241 AAIPVKTSGDSRVLLGDVARVEMgAENYDSI-SSFDGIPSVYIGIKATPSANPLDVIKEVRAIMPELESQLPPNLKVSIA 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 320 YDSTVAINESIHEVIKTIVEAAVIVLVVITLFLGSFRAVIIPIVTIPLSLIGVAMVMQAMGFSWNLMTLLAMVLAIGLVV 399
Cdd:PRK09579 320 YDATLFIQASIDEVVKTLGEAVLIVIVVVFLFLGALRSVLIPVVTIPLSMIGVLFFMQMMGYSINLLTLLAMVLAIGLVV 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 400 DDAIVVLENVDRHIKEGESPFRAAIIGTREIAVPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGIIALT 479
Cdd:PRK09579 400 DDAIVVVENIHRHIEEGKSPFDAALEGAREIAMPVVSMTITLAAVYAPIGFLTGLTGALFKEFALTLAGAVIISGIVALT 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 480 LSPMMCSKMLKANEKPNRFEQKVHHVLDKMTNRYEKMLGAVMQHRPVVIAFAIIVFGSLPVLFKFIPSELAPSEDKGVVM 559
Cdd:PRK09579 480 LSPMMCALLLRHEENPSGLAHRLDRLFERLKQRYQRALHGTLNTRPVVLVFAVIVLALIPVLLKFTQSELAPEEDQGIIF 559
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 560 LLGTGPSNANLDYLSNTMADVNKILSDQPEVQFAQVFTGVPNSNQAFGIASMVPWSQREASQAEVTTRVGNLVKDIPGMA 639
Cdd:PRK09579 560 MMSSSPQPANLDYLNAYTDEFTPIFKSFPEYYSSFQINGFNGVQSGIGGFLLKPWNERERTQMELLPLVQAKLEEIPGLQ 639
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 640 VTAFQMPELPGAGSGLPIQFVITTPNAFESLFTIATDVLTEVQSSPLFVYSNLDLNYDSATMKINIDKDKAGAYGVTMQD 719
Cdd:PRK09579 640 IFGFNLPSLPGTGEGLPFQFVINTANDYESLLQVAQRVKQRAQESGKFAFLDIDLAFDKPEVVVDIDRAKAAQMGVSMQD 719
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 720 IGVTLGTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMNNYYVRGADGKAVPLGSLISIDVIAEPRALPHFNQLNSA 799
Cdd:PRK09579 720 LGGTLATLLGEGEINRFTIDGRSYKVIAQVERPYRDNPGWLNNYYVKNEQGQLLPLSTLITLSDRARPRQLNQFQQLNSA 799
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 800 TVGAVPSpgTAMGDAINWFENIAETKLPKGYNHDYMGEARQYVTEGSALYATFGLALAIIFLVLAIQFESLKDPIVIMVS 879
Cdd:PRK09579 800 IISGFPI--VSMGEAIETVQQIAREEAPEGFAFDYAGASRQYVQEGSALWVTFGLALAIIFLVLAAQFESFRDPLVILVT 877
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 880 VPLAICGALIALAWGMATMNIYSQVGLITLVGLITKHGILICEVAKEEQLHNKLSRIDAVMAAAKVRLRPILMTTAAMIA 959
Cdd:PRK09579 878 VPLSICGALIPLFLGVSSMNIYTQVGLVTLIGLISKHGILIVEFANQLRHEQGLSRREAIEEAAAIRLRPVLMTTAAMVF 957
|
970 980 990 1000 1010
....*....|....*....|....*....|....*....|....*....|.
gi 764441443 960 GLIPLMYATGAGAAQRFSIGIVIVAGLAIGTIFTLFVLPVIYSYLAEKHKP 1010
Cdd:PRK09579 958 GMVPLILATGAGAVSRFDIGLVIATGMSIGTLFTLFVLPCIYTLLAKPDAA 1008
|
|
| ACR_tran |
pfam00873 |
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are ... |
3-1001 |
0e+00 |
|
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are involved in drug resistance. AcrB cooperates with a membrane fusion protein, AcrA, and an outer membrane channel TolC. The structure shows the AcrB forms a homotrimer.
Pssm-ID: 395701 [Multi-domain] Cd Length: 1021 Bit Score: 824.62 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 3 FTDVFIKRPVLAVSISFLIALLGLQAVFKMQVSEYPEMTNTVITVSTSYYGASADLIQGFITQPLEQAVAQADNIDYMTS 82
Cdd:pfam00873 1 MSKFFIRRPIFTLVLAIAILLAGILSFFSLPVDAFPEIAPPTVQVSTSYPGASPEEVEDTVTQPIEQAMNGLDGLKYMSS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 83 QSVLGTSKITVNMKLNTDPNAALSDVLAKTNSVRSQLPKEAEDPTVTMSTGSTTAVLYIGFTS--HELDSSQITDYLQRV 160
Cdd:pfam00873 81 QSSYGLSSITLTFELGTDIDIARQDVQNRLQLATPLLPEGVQRPGISVIKTSLGPIMVLAVTSpdGSYTQTDLRDYADTN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 161 INPQLYSINGISSIDLYGGMKYALRVWLDPAKMAAFNLTATDVMGVLSANNYQSATGQAVGEFVLFNGSADTQVSNVDEL 240
Cdd:pfam00873 161 IKPQLSRVPGVGDVQLFGGSEYAMRIWLDPQKLARYGLTLTDVVSALKEQNVNIGAGQLEGQGLQALIRAQGQLQSAEDF 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 241 KNLVVKNENGSVTRLSDIANVTLAKSHDTYRASANGQEAVVAAINAAPSANPINIAKDVLDILPELKRNMPSNISMNVMY 320
Cdd:pfam00873 241 EKIIVKNQDGSPVRLRDVATVELGSELYRGFATFNGKPAVGLGVQKLPGANAIETADAVRAKLAELKPTFPQGVEIVVVY 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 321 DSTVAINESIHEVIKTIVEAAVIVLVVITLFLGSFRAVIIPIVTIPLSLIGVAMVMQAMGFSWNLMTLLAMVLAIGLVVD 400
Cdd:pfam00873 321 DTTPFIRASIEEVVKTLLEAIVLVILVMFLFLQNWRATLIPAIAIPLSLLGTFAVMKAFGFSINTLTLGGLVLAIGLVVD 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 401 DAIVVLENVDRHIKE-GESPFRAAIIGTREIAVPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGIIALT 479
Cdd:pfam00873 401 DAIVVVENIERVLEEnGLKPLEAAYKSMGEIGGALVAIALVLSAVFLPILFLGGLTGRIFRQFAITIVLAILLSVLVALT 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 480 LSPMMCSKMLKANEKP--NRFEQKVHHVLDKMTNRYEKMLGAVMQHRPVVIAFAIIVFGSLPVLFKFIPSELAPSEDKGV 557
Cdd:pfam00873 481 LTPALCATLLKPRREPkhGGFFRWFNRMFDRLTRGYAKLLAKVLRHTAVVLLVALLLVVGSVWLFVRIPTEFLPEEDEGV 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 558 VMLLGTGPSNANLDYLSNTMADVNKILSDQPEVQFAQVFTGV------PNSNQAFGIASMVPWSQR---EASQAEVTTRV 628
Cdd:pfam00873 561 FVTSAQLPPGVSLDQTQRVMKQVEKILKEKPEVESVFAVTGFafsgdnNGPNSGDAFISLKPWKERpgpEKSVQALIERL 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 629 GNLVKDIPGMAVTAFQMPELPG----AGSGLPIQFVITTPNAfESLFTIATDVLTEVQSSPLFVYSNLDLNYDSATMKIN 704
Cdd:pfam00873 641 RKALKQIPGANVFLFQPIQLRGlgtiSGFRSDLQVKIFGDDL-DALDEARNQILAALAQLPGLSDVRSDGQEDQPQLQVN 719
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 705 IDKDKAGAYGVTMQDIGVTLGTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMNNYYVRGADGKAVPLGSLISIDVI 784
Cdd:pfam00873 720 IDREKAARLGVSIQDINDTLSTALGGSYVNDFPEGGRVYDVVVQLPEDFRSSPEDIGQLYVRNPYGKMIPLSAFAKIEWG 799
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 785 AEPRALPHFNQLNSATVGAVPSPGTAMGDAINWFENIAET-KLPKGYNHDYMGEARQYVTEGSALYATFGLALAIIFLVL 863
Cdd:pfam00873 800 YGPPSINRYNGFRSIVISGNVAAGDSLGDAMEAMAQIAKQvKLPPGYGYTWTGQFEQEQLAGNSLPILIALALLVVFLVL 879
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 864 AIQFESLKDPIVIMVSVPLAICGALIALAWGMATMNIYSQVGLITLVGLITKHGILICEVAKEEQLHNKLSRIDAVMAAA 943
Cdd:pfam00873 880 AALYESWSDPLSIMLTVPLALVGALLALWLRGLPNSVYAQVGLILLIGLAVKNAILMVEFANELREQEGKSLEEAILEAC 959
|
970 980 990 1000 1010
....*....|....*....|....*....|....*....|....*....|....*...
gi 764441443 944 KVRLRPILMTTAAMIAGLIPLMYATGAGAAQRFSIGIVIVAGLAIGTIFTLFVLPVIY 1001
Cdd:pfam00873 960 RLRLRPILMTALAAILGVLPLALSTGAGSELQQPLGIVVFGGLVTSTVLTLLVVPVFY 1017
|
|
| 2A0602 |
TIGR00915 |
The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Proteins ... |
3-1001 |
0e+00 |
|
The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate]
Pssm-ID: 273335 [Multi-domain] Cd Length: 1044 Bit Score: 671.44 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 3 FTDVFIKRPVLAVSISFLIALLGLQAVFKMQVSEYPEMTNTVITVSTSYYGASADLIQGFITQPLEQAVAQADNIDYMTS 82
Cdd:TIGR00915 1 MAKFFIDRPIFAWVIAIIIMLAGTLSILSLPVSQYPSIAPPAITVSASYPGASAQTVQDTVTQVIEQNMNGIDGLRYMSS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 83 QSV-LGTSKITVNMKLNTDPNAALSDVLAKTNSVRSQLPKEAEDPTVTMSTGSTTAVLYIGFTSH--ELDSSQITDYLQR 159
Cdd:TIGR00915 81 SSDsDGSMTITLTFEQGTDPDIAQVQVQNKLQLATPLLPQEVQRQGVRVEKASSNFLMVIGLVSDdgSMTKEDLSDYAAS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 160 VINPQLYSINGISSIDLYGGmKYALRVWLDPAKMAAFNLTATDVMGVLSANNYQSATGQAVGEFVL----FNGS--ADTQ 233
Cdd:TIGR00915 161 NMVDPLSRLEGVGDVQLFGS-QYAMRIWLDPAKLNSYQLTPADVISAISAQNAQISAGQLGGLPAVpgqqLNATiiAQTR 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 234 VSNVDELKNLVVK-NENGSVTRLSDIANVTLAKSHDTYRASANGQEAVVAAINAAPSANPINIAKDVLDILPELKRNMPS 312
Cdd:TIGR00915 240 LQTPEQFENILLKvNTDGSQVRLKDVARVELGGENYSISARFNGKPASGLAIKLATGANALDTAKAVKAELAVLEPFFPQ 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 313 NISMNVMYDSTVAINESIHEVIKTIVEAAVIVLVVITLFLGSFRAVIIPIVTIPLSLIGVAMVMQAMGFSWNLMTLLAMV 392
Cdd:TIGR00915 320 GMKYVYPYDTTPFVEASIEEVVHTLIEAIVLVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFAMV 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 393 LAIGLVVDDAIVVLENVDRHIK-EGESPFRAAIIGTREIAVPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVF 471
Cdd:TIGR00915 400 LAIGLLVDDAIVVVENVERVMAeEGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMA 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 472 VSGIIALTLSPMMCSKMLKANEKPNRFEQK------VHHVLDKMTNRYEKMLGAVMQHR-PVVIAFAIIVfGSLPVLFKF 544
Cdd:TIGR00915 480 LSVLVALILTPALCATMLKPIEKGEHHEKKggffgwFNRMFDSSTHGYENGVGKILRRRgRYLLVYVLLV-GGMVFLFVR 558
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 545 IPSELAPSEDKGVVMLLGTGPSNANLDYLSNTMADVNKILSDQPEVQFAQVFTGVPNS------NQAFGIASMVPWSQRE 618
Cdd:TIGR00915 559 LPTSFLPDEDQGVFMTIVQLPAGATAERTQAVLAQVTKYLLAKEKANVESVFTVNGFSfagrgqNMGMAFIRLKDWEERT 638
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 619 ASQAEVTTRVGNLVK---DIPGMAVTAFQMP---ELpGAGSGLPIQFVITTPNAFESLFTIATDVLTEVQSSPLFVYSNL 692
Cdd:TIGR00915 639 GKENSVFAIAGRATGhfmQIKDAMVIAFVPPailEL-GNATGFDFFLQDRAGLGHEALLQARNQLLGLAAQNPALTRVRP 717
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 693 DLNYDSATMKINIDKDKAGAYGVTMQDIGVTLGTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMNNYYVRGADGKA 772
Cdd:TIGR00915 718 NGLEDEPQLKIDIDREKAQALGVSIADINTTLSTAWGSSYVNDFIDRGRVKRVYVQAEEDARMSPEDINKWYVRNASGEM 797
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 773 VPLGSLISIDVIAEPRALPHFNQLNSATVGAVPSPGTAMGDAINWFENIAEtKLPKGYNHDYMGEARQYVTEGSALYATF 852
Cdd:TIGR00915 798 VPFSAFATVRWEYGSPQLERYNGLPSMEILGSAAPGVSTGQAMAAMEAIAQ-KLPPGFGFSWTGMSYEERLSGSQAPALY 876
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 853 GLALAIIFLVLAIQFESLKDPIVIMVSVPLAICGALIALAWGMATMNIYSQVGLITLVGLITKHGILICEVAKEEQLHNK 932
Cdd:TIGR00915 877 ALSLLVVFLCLAALYESWSIPVSVMLVVPLGIIGALLATTLRGLSNDVYFQVGLLTTIGLSAKNAILIVEFAKELMAQGK 956
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 764441443 933 lSRIDAVMAAAKVRLRPILMTTAAMIAGLIPLMYATGAGAAQRFSIGIVIVAGLAIGTIFTLFVLPVIY 1001
Cdd:TIGR00915 957 -SIVEAALEAARLRLRPILMTSLAFILGVVPLAISTGAGSGSQHAIGTGVFGGMVTATVLAIFFVPLFY 1024
|
|
| PRK15127 |
PRK15127 |
multidrug efflux RND transporter permease subunit AcrB; |
7-1001 |
1.21e-176 |
|
multidrug efflux RND transporter permease subunit AcrB;
Pssm-ID: 185081 [Multi-domain] Cd Length: 1049 Bit Score: 543.73 E-value: 1.21e-176
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 7 FIKRPVLAVSISFLIALLGLQAVFKMQVSEYPEMTNTVITVSTSYYGASADLIQGFITQPLEQAVAQADNIDYMTSQS-V 85
Cdd:PRK15127 5 FIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVTISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSdS 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 86 LGTSKITVNMKLNTDPNAALSDVLAKTNSVRSQLPKEAEDPTVTMSTGSTTAVLYIGFTSHE--LDSSQITDYLQRVINP 163
Cdd:PRK15127 85 TGTVQITLTFESGTDADIAQVQVQNKLQLAMPLLPQEVQQQGVSVEKSSSSFLMVVGVINTDgtMTQEDISDYVAANMKD 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 164 QLYSINGISSIDLYGGmKYALRVWLDPAKMAAFNLTATDVMGVLSANNYQSATGQAVGEFVL----FNGS--ADTQVSNV 237
Cdd:PRK15127 165 PISRTSGVGDVQLFGS-QYAMRIWMNPNELNKFQLTPVDVINAIKAQNAQVAAGQLGGTPPVkgqqLNASiiAQTRLTST 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 238 DELKNLVVK-NENGSVTRLSDIANVTLAKSHDTYRASANGQEAVVAAINAAPSANPINIAKDVLDILPELKRNMPSNISM 316
Cdd:PRK15127 244 EEFGKILLKvNQDGSRVRLRDVAKIELGGENYDIIAEFNGQPASGLGIKLATGANALDTAAAIRAELAKMEPFFPSGLKI 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 317 NVMYDSTVAINESIHEVIKTIVEAAVIVLVVITLFLGSFRAVIIPIVTIPLSLIGVAMVMQAMGFSWNLMTLLAMVLAIG 396
Cdd:PRK15127 324 VYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLAIG 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 397 LVVDDAIVVLENVDR-HIKEGESPFRAAIIGTREIAVPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGI 475
Cdd:PRK15127 404 LLVDDAIVVVENVERvMAEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMALSVL 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 476 IALTLSPMMCSKMLKANEKPNRFEQKV------HHVLDKMTNRYEKMLGAVMQH--RPVVIAFAIIVfgSLPVLFKFIPS 547
Cdd:PRK15127 484 VALILTPALCATMLKPIAKGDHGEGKKgffgwfNRMFEKSTHHYTDSVGNILRStgRYLVLYLIIVV--GMAYLFVRLPS 561
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 548 ELAPSEDKGVVMLLGTGPSNANLDYLSNTMADVNKILSDQPEVQFAQVFT----GVPNSNQAFGIA--SMVPWSQREASQ 621
Cdd:PRK15127 562 SFLPDEDQGVFLTMVQLPAGATQERTQKVLNEVTDYYLTKEKNNVESVFAvngfGFAGRGQNTGIAfvSLKDWADRPGEE 641
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 622 AEV---TTRVGNLVKDIPGMAVTAFQMP---ELpGAGSGLPIQFVITTPNAFESLFTIATDVLTEVQSSP-LFVYSNLDL 694
Cdd:PRK15127 642 NKVeaiTMRATRAFSQIKDAMVFAFNLPaivEL-GTATGFDFELIDQAGLGHEKLTQARNQLLGEAAKHPdMLVGVRPNG 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 695 NYDSATMKINIDKDKAGAYGVTMQDIGVTLGTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMNNYYVRGADGKAVP 774
Cdd:PRK15127 721 LEDTPQFKIDIDQEKAQALGVSISDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYRMLPDDIGDWYVRAADGQMVP 800
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 775 LGSLISID-VIAEPRaLPHFNQLNSATVGAVPSPGTAMGDAINWFENIAeTKLPKGYNHDYMGEARQYVTEGSALYATFG 853
Cdd:PRK15127 801 FSAFSSSRwEYGSPR-LERYNGLPSMEILGQAAPGKSTGEAMELMEELA-SKLPTGVGYDWTGMSYQERLSGNQAPALYA 878
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 854 LALAIIFLVLAIQFESLKDPIVIMVSVPLAICGALIALAWGMATMNIYSQVGLITLVGLITKHGILICEVAKEEQLHNKL 933
Cdd:PRK15127 879 ISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGK 958
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 764441443 934 SRIDAVMAAAKVRLRPILMTTAAMIAGLIPLMYATGAGAAQRFSIGIVIVAGLAIGTIFTLFVLPVIY 1001
Cdd:PRK15127 959 GLIEATLEAVRMRLRPILMTSLAFILGVMPLVISSGAGSGAQNAVGTGVMGGMVTATVLAIFFVPVFF 1026
|
|
| PRK10555 |
PRK10555 |
multidrug efflux RND transporter permease AcrD; |
7-1001 |
2.23e-169 |
|
multidrug efflux RND transporter permease AcrD;
Pssm-ID: 182544 [Multi-domain] Cd Length: 1037 Bit Score: 524.39 E-value: 2.23e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 7 FIKRPVLAVSISFLIALLGLQAVFKMQVSEYPEMTNTVITVSTSYYGASADLIQGFITQPLEQAVAQADNIDYMTSQSV- 85
Cdd:PRK10555 5 FIDRPIFAWVLAILLCLTGTLAIFSLPVEQYPDLAPPNVRITANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSSQSSg 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 86 LGTSKITVNMKLNTDPNAALSDVLAKTNSVRSQLPKEAEDPTVTMSTGSTTAVLYIGFTSHE--LDSSQITDYLQRVINP 163
Cdd:PRK10555 85 TGQASVTLSFKAGTDPDEAVQQVQNQLQSAMRKLPQAVQNQGVTVRKTGDTNILTIAFVSTDgsMDKQDIADYVASNIQD 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 164 QLYSINGISSIDLYGGmKYALRVWLDPAKMAAFNLTATDVMGVLSANNYQSATGQAVGEFVLFNGS------ADTQVSNV 237
Cdd:PRK10555 165 PLSRVNGVGDIDAYGS-QYSMRIWLDPAKLNSFQMTTKDVTDAIESQNAQIAVGQLGGTPSVDKQAlnatinAQSLLQTP 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 238 DELKNLVVK-NENGSVTRLSDIANVTLAKSHDTYRASANGQEAVVAAINAAPSANPINIAKDVLDILPELKRNMPSNISM 316
Cdd:PRK10555 244 EQFRDITLRvNQDGSEVTLGDVATVELGAEKYDYLSRFNGKPASGLGVKLASGANEMATAKLVLNRLDELAQYFPHGLEY 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 317 NVMYDSTVAINESIHEVIKTIVEAAVIVLVVITLFLGSFRAVIIPIVTIPLSLIGVAMVMQAMGFSWNLMTLLAMVLAIG 396
Cdd:PRK10555 324 KVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSINTLTMFAMVLAIG 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 397 LVVDDAIVVLENVDRHI-KEGESPFRAAIIGTREIAVPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGI 475
Cdd:PRK10555 404 LLVDDAIVVVENVERIMsEEGLTPREATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGTTGAIYRQFSITIVSAMVLSVL 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 476 IALTLSPMMCSKMLKANEKPNRFEQK-----VHHVLDKMTNRYEKMLGAVMQHRPVVIAFAIIVFGSLPVLFKFIPSELA 550
Cdd:PRK10555 484 VAMILTPALCATLLKPLKKGEHHGQKgffgwFNRMFNRNAERYEKGVAKILHRSLRWILIYVLLLGGMVFLFLRLPTSFL 563
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 551 PSEDKGVVMLLGTGPSNANldyLSNTMADVNKI-----LSDQPEVQ--FAQVFTGVPNSNQafGIASMV----PWSQR-- 617
Cdd:PRK10555 564 PLEDRGMFTTSVQLPSGST---QQQTLKVVEKVekyyfTHEKDNVMsvFATVGSGPGGNGQ--NVARMFirlkDWDERds 638
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 618 -EASQAEVTTRVGNLVKDIPGMAVTAFQMPELPGAGS--GLPIQFVITTPNAFESLFTIATDVLTEVQSSPLFV---YSN 691
Cdd:PRK10555 639 kTGTSFAIIERATKAFNKIKEARVIASSPPAISGLGSsaGFDMELQDHAGAGHDALMAARNQLLALAAKNPELTrvrHNG 718
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 692 LDlnyDSATMKINIDKDKAGAYGVTMQDIGVTLGTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMNNYYVRGADGK 771
Cdd:PRK10555 719 LD---DSPQLQIDIDQRKAQALGVSIDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAPYRMLPDDINLWYVRNKDGG 795
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 772 AVPLGSLI-SIDVIAEPRaLPHFNQLNSATVGAVPSPGTAMGDAINWFENIAEtKLPKGYNHDYMGEARQYVTEGSALYA 850
Cdd:PRK10555 796 MVPFSAFAtSRWETGSPR-LERYNGYSAVEIVGEAAPGVSTGTAMDIMESLVK-QLPNGFGLEWTAMSYQERLSGAQAPA 873
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 851 TFGLALAIIFLVLAIQFESLKDPIVIMVSVPLAICGALIAlAWGMATMN-IYSQVGLITLVGLITKHGILICEVAKEeqL 929
Cdd:PRK10555 874 LYAISLLVVFLCLAALYESWSVPFSVMLVVPLGVIGALLA-TWMRGLENdVYFQVGLLTVIGLSAKNAILIVEFANE--M 950
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 764441443 930 HNKLSR-IDAVMAAAKVRLRPILMTTAAMIAGLIPLMYATGAGAAQRFSIGIVIVAGLAIGTIFTLFVLPVIY 1001
Cdd:PRK10555 951 NQKGHDlFEATLHASRQRLRPILMTSLAFIFGVLPMATSTGAGSGSQHAVGTGVMGGMISATILAIFFVPLFF 1023
|
|
| PRK09577 |
PRK09577 |
multidrug efflux RND transporter permease subunit; |
7-1001 |
2.32e-165 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 169981 [Multi-domain] Cd Length: 1032 Bit Score: 513.63 E-value: 2.32e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 7 FIKRPVLAVSISFLIALLGLQAVFKMQVSEYPEMTNTVITVSTSYYGASADLIQGFITQPLEQAVAQADNIDYMTSQSVL 86
Cdd:PRK09577 5 FIDRPVFAWVISLFIMLGGIFAIRALPVAQYPDIAPPVVSIYATYPGASAQVVEESVTALIEREMNGAPGLLYTSATSSA 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 87 GTSKITVNMKLNTDPNAALSDVLAKTNSVRSQLPKEAEDPTVTMSTGSTTAVLYIGFTSHE--LDSSQITDYLQRVINPQ 164
Cdd:PRK09577 85 GQASLSLTFKQGVNADLAAVEVQNRLKTVEARLPEPVRRDGIQVEKAADNIQLIVSLTSDDgrLTGVELGEYASANVLQA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 165 LYSINGISSIDLYGGmKYALRVWLDPAKMAAFNLTATDVMGVLSANNYQSATGQ----AVGEFVLFNGS--ADTQVSNVD 238
Cdd:PRK09577 165 LRRVEGVGKVQFWGA-EYAMRIWPDPVKLAALGLTASDIASAVRAHNARVTIGDigrsAVPDSAPIAATvfADAPLKTPE 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 239 ELKNLVVK-NENGSVTRLSDIANVTLAKSHDTYRASANGQEAVVAAINAAPSANPINIAKDVLDILPELKRNMPSNISMN 317
Cdd:PRK09577 244 DFGAIALRaRADGSALYLRDVARIEFGGNDYNYPSYVNGKTATGMGIKLAPGSNAVATEKRVRATMDELSRYFPPGVKYQ 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 318 VMYDSTVAINESIHEVIKTIVEAAVIVLVVITLFLGSFRAVIIPIVTIPLSLIGVAMVMQAMGFSWNLMTLLAMVLAIGL 397
Cdd:PRK09577 324 IPYETSSFVRVSMNKVVTTLIEAGVLVFLVMFLFMQNFRATLIPTLVVPVALLGTFGVMLAAGFSINVLTMFGMVLAIGI 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 398 VVDDAIVVLENVDR-HIKEGESPFRAAIIGTREIAVPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGII 476
Cdd:PRK09577 404 LVDDAIVVVENVERlMVEEGLSPYDATVKAMKQISGAIVGITVVLTSVFVPMAFFGGAVGNIYRQFALSLAVSIGFSAFL 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 477 ALTLSPMMCSKMLK-----ANEKP------NRFeqkvhhvLDKMTNRYEKMLGAVMQhRPV--VIAFAIIVfGSLPVLFK 543
Cdd:PRK09577 484 ALSLTPALCATLLKpvdgdHHEKRgffgwfNRF-------VARSTQRYATRVGAILK-RPLrwLVVYGALT-AAAALLFT 554
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 544 FIPSELAPSEDKGVVMLLGTGPSNANLDYLSNTMADVNKILSDQPEVQFAQVFTGV------PNSNQAFgiASMVPWSQR 617
Cdd:PRK09577 555 RLPTAFLPDEDQGNFMVMVIRPQGTPLAETMQSVREVESYLRRHEPVAYTFALGGFnlygegPNGGMIF--VTLKDWKER 632
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 618 EASQAEV---TTRVGNLVKDIPGMAVTAFQMPELP--GAGSGLPIQFVITTPNAFESLFTIATDVLTEVQSSPLFVYSNL 692
Cdd:PRK09577 633 KAARDHVqaiVARINERFAGTPNTTVFAMNSPALPdlGSTSGFDFRLQDRGGLGYAAFVAAREQLLAEGAKDPALTDLMF 712
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 693 DLNYDSATMKINIDKDKAGAYGVTMQDIGVTLGTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMNNYYVRGADGKA 772
Cdd:PRK09577 713 AGTQDAPQLKLDIDRAKASALGVSMDEINTTLAVMFGSDYIGDFMHGSQVRRVIVQADGRHRLDPDDVKKLRVRNAQGEM 792
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 773 VPLGSLISIDVIAEPRALPHFNQLNSATVGAVPSPGTAMGDAINWFENIAETkLPKGYNHDYMGEARQYVTEGSALYATF 852
Cdd:PRK09577 793 VPLAAFATLHWTLGPPQLTRYNGYPSFTINGSAAPGHSSGEAMAAIERIAAT-LPAGIGYAWSGQSFEERLSGAQAPMLF 871
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 853 GLALAIIFLVLAIQFESLKDPIVIMVSVPLAICGALIALAWGMATMNIYSQVGLITLVGLITKHGILICEVAKeEQLHNK 932
Cdd:PRK09577 872 ALSVLVVFLALAALYESWSIPFAVMLVVPLGVIGAVLGVTLRGMPNDIYFKVGLIATIGLSAKNAILIVEVAK-DLVAQR 950
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 764441443 933 LSRIDAVMAAAKVRLRPILMTTAAMIAGLIPLMYATGAGAAQRFSIGIVIVAGLAIGTIFTLFVLPVIY 1001
Cdd:PRK09577 951 MSLADAALEAARLRLRPIVMTSLAFGVGVLPLAFASGAASGAQIAIGTGVLGGVITATVLAVFLVPLFF 1019
|
|
| CusA |
COG3696 |
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism]; |
8-1010 |
7.01e-155 |
|
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism];
Pssm-ID: 442911 [Multi-domain] Cd Length: 1031 Bit Score: 486.07 E-value: 7.01e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 8 IKRPVLAVSISFLIALLGLQAVFKMQVSEYPEMTNTVITVSTSYYGASADLIQGFITQPLEQAVAQADNIDYMTSQSVLG 87
Cdd:COG3696 10 LRNRLLVLLLTLLLAAAGIYSLRRLPIDAFPDITNVQVQVITEAPGLSPEEVEQQVTYPIETALNGLPGVKEVRSISRFG 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 88 TSKITVNMKLNTDPNAALSDVLAKTNSVRSQLPKEAEdPTVT-MSTGSTTaVLYIGFTS--HELDSSQITDYLQRVINPQ 164
Cdd:COG3696 90 LSVVTVIFEDGTDIYWARQLVLERLQQVREQLPAGVT-PELGpISTGLGE-IYQYTLESdpGKYSLMELRTLQDWVIRPQ 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 165 LYSINGISSIDLYGGMKYALRVWLDPAKMAAFNLTATDVMGVLSANNyQSATGQavgeFVLFNGSA-----DTQVSNVDE 239
Cdd:COG3696 168 LRSVPGVAEVNSFGGFVKQYQVLVDPAKLRAYGLTLDDVIEALERNN-ANVGGG----YIERGGQEylvrgIGLIRSLED 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 240 LKNLVVKNENGSVTRLSDIANVTLAksHDTYR--ASANGQ-EAVVAAINAAPSANPINIAKDVLDILPELKRNMPSNISM 316
Cdd:COG3696 243 IENIVVKTRNGTPVLLRDVAEVRIG--PAPRRgaATLNGEgEVVGGIVLMLKGENALEVIEAVKAKLAELKPSLPEGVKI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 317 NVMYDSTVAINESIHEVIKTIVEAAVIVLVVITLFLGSFRAVIIPIVTIPLSLIGVAMVMQAMGFSWNLMTLLAMVLAIG 396
Cdd:COG3696 321 VPFYDRSDLIDRAIHTVTKNLLEGALLVILVLFLFLGNLRAALIVALAIPLSLLFAFIVMRLFGISANLMSLGGLAIDFG 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 397 LVVDDAIVVLENVDRHIKE------GESPFRAAIIGTREIAVPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSV 470
Cdd:COG3696 401 IIVDGAVVMVENILRRLEEnraagtPRERLEVVLEAAREVRRPIFFATLIIILVFLPIFTLEGVEGKLFRPMALTVIFAL 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 471 FVSGIIALTLSPMMCSKMLKAN--EKPNRfeqkvhhVLDKMTNRYEKMLGAVMQHRPVVIAFAIIVFGSLPVLFKFIPSE 548
Cdd:COG3696 481 LGALLLSLTLVPVLASLLLRGKvpEKENP-------LVRWLKRLYRPLLRWALRHPKLVLAVALVLLVLALALFPRLGSE 553
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 549 LAPSEDKGVVMLLGTGPSNANLDYLSNTMADVNKILSDQPEVQFAQVFTGVPNS-------NQAFGIASMVPWSQ--REA 619
Cdd:COG3696 554 FLPELDEGDLLVMATLPPGISLEESVELGQQVERILKSFPEVESVVSRTGRAEDatdpmgvNMSETFVILKPRSEwrSGR 633
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 620 SQAEVTTRVGNLVKDIPGMAVtAFQMP------ELPgagSGlpiqfvITTPNA-------FESLFTIATDVLTEVQSSP- 685
Cdd:COG3696 634 TKEELIAEMREALEQIPGVNF-NFSQPiqmrvdELL---SG------VRADVAvkifgddLDVLRRLAEQIEAVLKTVPg 703
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 686 ---LFVYSNLDLNYdsatMKINIDKDKAGAYGVTMQDIGVTLGTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMNN 762
Cdd:COG3696 704 aadVQVERVTGLPQ----LDIRIDRDAAARYGLNVADVQDVVETAIGGKAVGQVYEGERRFDIVVRLPEELRDDPEAIRN 779
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 763 YYVRGADGKAVPLGSLISIDVIAEPRALPHFNQLNSATVGAVPSpGTAMGDAInwfENI-----AETKLPKGYNHDYMGE 837
Cdd:COG3696 780 LPIPTPSGAQVPLSQVADIEVVEGPNQISRENGRRRIVVQANVR-GRDLGSFV---AEAqakvaEQVKLPPGYYIEWGGQ 855
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 838 ARQYVTEGSALYATFGLALAIIFLVLAIQFESLKDPIVIMVSVPLAICGALIALAW-GMaTMNIYSQVGLITLVGLITKH 916
Cdd:COG3696 856 FENLQRATARLAIVVPLALLLIFLLLYLAFGSVRDALLILLNVPFALIGGVLALWLrGM-PLSVSAGVGFIALFGVAVLN 934
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 917 GILICEVAKeEQLHNKLSRIDAVMAAAKVRLRPILMTTAAMIAGLIPLMYATGAGA-AQRfSIGIVIVAGLAIGTIFTLF 995
Cdd:COG3696 935 GVVLVSYIN-QLRAEGLDLREAIIEGALERLRPVLMTALVAALGLLPMALSTGPGSeVQR-PLATVVIGGLITSTLLTLL 1012
|
1050
....*....|....*
gi 764441443 996 VLPVIYSYLAEKHKP 1010
Cdd:COG3696 1013 VLPALYLLFGRRRLR 1027
|
|
| PRK10503 |
PRK10503 |
MdtB/MuxB family multidrug efflux RND transporter permease subunit; |
7-1001 |
7.65e-154 |
|
MdtB/MuxB family multidrug efflux RND transporter permease subunit;
Pssm-ID: 182501 [Multi-domain] Cd Length: 1040 Bit Score: 483.46 E-value: 7.65e-154
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 7 FIKRPVLAVSISFLIALLGLQAVFKMQVSEYPEMTNTVITVSTSYYGASADLIQGFITQPLEQAVAQADNIDYMTSQSVL 86
Cdd:PRK10503 16 FILRPVATTLLMVAILLAGIIGYRALPVSALPEVDYPTIQVVTLYPGASPDVMTSAVTAPLERQFGQMSGLKQMSSQSSG 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 87 GTSKITVNMKLNTDPNAALSDVLAKTNSVRSQLPKEAEDPTVTMSTG-STTAVLYIGFTSHELDSSQITDYLQRVINPQL 165
Cdd:PRK10503 96 GASVITLQFQLTLPLDVAEQEVQAAINAATNLLPSDLPNPPVYSKVNpADPPIMTLAVTSTAMPMTQVEDMVETRVAQKI 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 166 YSINGISSIDLYGGMKYALRVWLDPAKMAAFNLTATDVMGVLSANNYQSATGQAVGEFVLFNGSADTQVSNVDELKNLVV 245
Cdd:PRK10503 176 SQVSGVGLVTLSGGQRPAVRVKLNAQAIAALGLTSETVRTAITGANVNSAKGSLDGPTRAVTLSANDQMQSAEEYRQLII 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 246 KNENGSVTRLSDIANVTLAKSHDTYRASANGQEAVVAAINAAPSANPINIAKDVLDILPELKRNMPSNISMNVMYDSTVA 325
Cdd:PRK10503 256 AYQNGAPIRLGDVATVEQGAENSWLGAWANKQQAIVMNVQRQPGANIIATADSIRQMLPQLTESLPKSVKVTVLSDRTTN 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 326 INESIHEVIKTIVEAAVIVLVVITLFLGSFRAVIIPIVTIPLSLIGVAMVMQAMGFSWNLMTLLAMVLAIGLVVDDAIVV 405
Cdd:PRK10503 336 IRASVDDTQFELMLAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTFAVMVFLDFSINNLTLMALTIATGFVVDDAIVV 415
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 406 LENVDRHIKEGESPFRAAIIGTREIAVPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGIIALTLSPMMC 485
Cdd:PRK10503 416 IENISRYIEKGEKPLAAALKGAGEIGFTIISLTFSLIAVLIPLLFMGDIVGRLFREFAVTLAVAILISAVVSLTLTPMMC 495
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 486 SKMLKANE--KPNRFEQKVHHVLDKMTNRYEKMLGAVMQHRPVVIAFAIIVFGSLPVLFKFIPSELAPSEDKGVVMLLGT 563
Cdd:PRK10503 496 ARMLSQESlrKQNRFSRASERMFDRVIAAYGRGLAKVLNHPWLTLSVALSTLLLTVLLWIFIPKGFFPVQDNGIIQGTLQ 575
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 564 GPSNANLDYLSNTMADVNKILSDQPEVQFAQVFTGVPNSNQAFGIA----SMVPWSQREASQAEVTTRVGNLVKDIPGMA 639
Cdd:PRK10503 576 APQSSSFANMAQRQRQVADVILQDPAVQSLTSFVGVDGTNPSLNSArlqiNLKPLDERDDRVQKVIARLQTAVAKVPGVD 655
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 640 VTAFQMPELP--GAGSGLPIQFVITTpNAFESLFTIATDVLTEVQSSPLFVYSNLDLNYDSATMKINIDKDKAGAYGVTM 717
Cdd:PRK10503 656 LYLQPTQDLTidTQVSRTQYQFTLQA-TSLDALSTWVPKLMEKLQQLPQLSDVSSDWQDKGLVAYVNVDRDSASRLGISM 734
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 718 QDIGVTLGTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMNNYYVRGADGKAVPLGSLISIDVIAEPRALPHFNQLN 797
Cdd:PRK10503 735 ADVDNALYNAFGQRLISTIYTQANQYRVVLEHNTENTPGLAALDTIRLTSSDGGVVPLSSIATIEQRFGPLSINHLDQFP 814
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 798 SATVGAVPSPGTAMGDAINWFENIAET-KLPKGYNHDYMGEARQYvteGSALYATFGLALAII---FLVLAIQFESLKDP 873
Cdd:PRK10503 815 STTISFNVPDGYSLGDAVQAIMDTEKTlNLPADITTQFQGSTLAF---QSALGSTVWLIVAAVvamYIVLGVLYESFIHP 891
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 874 IVIMVSVPLAICGALIALAWGMATMNIYSQVGLITLVGLITKHGILICEVAKEEQLHNKLSRIDAVMAAAKVRLRPILMT 953
Cdd:PRK10503 892 ITILSTLPTAGVGALLALMIAGSELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMSPRDAIYQACLLRFRPILMT 971
|
970 980 990 1000
....*....|....*....|....*....|....*....|....*...
gi 764441443 954 TAAMIAGLIPLMYATGAGAAQRFSIGIVIVAGLAIGTIFTLFVLPVIY 1001
Cdd:PRK10503 972 TLAALLGALPLMLSTGVGAELRRPLGICMVGGLIVSQVLTLFTTPVIY 1019
|
|
| PRK10614 |
PRK10614 |
multidrug efflux system subunit MdtC; Provisional |
1-1004 |
9.08e-143 |
|
multidrug efflux system subunit MdtC; Provisional
Pssm-ID: 182589 [Multi-domain] Cd Length: 1025 Bit Score: 453.80 E-value: 9.08e-143
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 1 MRFTDVFIKRPVLAVSISFLIALLGLQAVFKMQVSEYPEMTNTVITVSTSYYGASADLIQGFITQPLEQAVAQADNIDYM 80
Cdd:PRK10614 1 MKFFALFIYRPVATILLSLAITLCGILGFRLLPVAPLPQVDFPVIMVSASLPGASPETMASSVATPLERSLGRIAGVNEM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 81 TSQSVLGTSKITVNMKLNTDPNAALSDVLAKTNSVRSQLPKE-AEDPTVTMSTGSTTAVLYIGFTSHELDSSQITDYLQR 159
Cdd:PRK10614 81 TSSSSLGSTRIILQFDFDRDINGAARDVQAAINAAQSLLPSGmPSRPTYRKANPSDAPIMILTLTSDTYSQGQLYDFAST 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 160 VINPQLYSINGISSIDLYGGMKYALRVWLDPAkmAAFN--LTATDVMGVLSANNYQSATGQavgefvLFNGSADTQVSNV 237
Cdd:PRK10614 161 QLAQTISQIDGVGDVDVGGSSLPAVRVGLNPQ--ALFNqgVSLDDVRQAISNANVRRPQGA------VEDGTHRWQIQTN 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 238 DELKN------LVVKNENGSVTRLSDIANVTlaKSHDTYRAS--ANGQEAVVAAINAAPSANPINIAKDVLDILPELKRN 309
Cdd:PRK10614 233 DELKTaaeyqpLIIHYNNGAAVRLGDVATVT--DSVQDVRNAgmTNAKPAILLMIRKLPEANIIQTVDRIRAKLPELRET 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 310 MPSNISMNVMYDSTVAINESIHEVIKTIVEAAVIVLVVITLFLGSFRAVIIPIVTIPLSLIGVAMVMQAMGFSWNLMTLL 389
Cdd:PRK10614 311 IPAAIDLQIAQDRSPTIRASLEEVEQTLAISVALVILVVFLFLRSGRATLIPAVAVPVSLIGTFAAMYLCGFSLNNLSLM 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 390 AMVLAIGLVVDDAIVVLENVDRHIKEGESPFRAAIIGTREIAVPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGS 469
Cdd:PRK10614 391 ALTIATGFVVDDAIVVLENISRHLEAGMKPLQAALQGVREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLFREFAVTLSVA 470
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 470 VFVSGIIALTLSPMMCSKMLKANE-KPNRFEQKVHHVLDKMTNRYEKMLGAVMQHRPVVIAFAIIVFGSLPVLFKFIPSE 548
Cdd:PRK10614 471 IGISLLVSLTLTPMMCAWLLKSSKpREQKRLRGFGRMLVALQQGYGRSLKWVLNHTRWVGVVLLGTIALNVWLYISIPKT 550
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 549 LAPSEDKGVVMLLGTGPSNANLDYLSNTMADVNKILSDQPEVQFAQVFTGVPNSNQAFGIASMVPWSQREASQAEVTTRV 628
Cdd:PRK10614 551 FFPEQDTGRLMGFIQADQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFTGGSRVNSGMMFITLKPLSERSETAQQVIDRL 630
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 629 -GNLVKDiPG--MAVTAFQMPELPGAGSGLPIQFVITTPNaFESLFTIATDVLTEVQSSPLFVYSNLDLNYDSATMKINI 705
Cdd:PRK10614 631 rVKLAKE-PGanLFLMAVQDIRVGGRQSNASYQYTLLSDD-LAALREWEPKIRKALAALPELADVNSDQQDKGAEMALTY 708
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 706 DKDKAGAYGVTMQDIGVTLGTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMNNYYVRGADGKAVPLGSLISIDVIA 785
Cdd:PRK10614 709 DRDTMARLGIDVQAANSLLNNAFGQRQISTIYQPLNQYKVVMEVDPRYTQDISALEKMFVINNEGKAIPLSYFAKWQPAN 788
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 786 EPRALPHFNQLNSATVGAVPSPGTAMGDAINWFE-NIAETKLPKGYNHDYMGEARQYV-TEGSALYATFGlALAIIFLVL 863
Cdd:PRK10614 789 APLSVNHQGLSAASTISFNLPTGKSLSDASAAIErAMTQLGVPSTVRGSFAGTAQVFQeTMNSQLILILA-AIATVYIVL 867
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 864 AIQFESLKDPIVIMVSVPLAICGALIALAWGMATMNIYSQVGLITLVGLITKHGILICEVAKEEQLHNKLSRIDAVMAAA 943
Cdd:PRK10614 868 GILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRNGNLTAQEAIFQAC 947
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 764441443 944 KVRLRPILMTTAAMIAGLIPLMYATGAGAAQRFSIGIVIVAGLAIGTIFTLFVLPVIYSYL 1004
Cdd:PRK10614 948 LLRFRPIMMTTLAALFGALPLVLSGGDGAELRQPLGITIVGGLVMSQLLTLYTTPVVYLFF 1008
|
|
| 2A0601 |
TIGR00914 |
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation ... |
19-1001 |
6.37e-96 |
|
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation antiporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 129992 [Multi-domain] Cd Length: 1051 Bit Score: 327.87 E-value: 6.37e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 19 FLIALLGLQAVFKMQVSEYPEMTNTVITVSTSYYGASADLIQGFITQPLEQAVAQADNIDYMTSQSVLGTSKITVNMKLN 98
Cdd:TIGR00914 21 LVMAILGIWSYNRLPIDAVPDITNVQVQINTSAPGYSPLEVEQRVTYPIETAMAGLPGLETTRSLSRYGLSQVTVIFKDG 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 99 TDPNAALSDVLAKTNSVRSQLPKEAEDPTVTMSTGSTTAVLYI-----GFTSHELDSSQITDY--LQR-VINPQLYSING 170
Cdd:TIGR00914 101 TDLYFARQLVNERLQQARDNLPEGVSPEMGPISTGLGEIFLYTveaeeGARKKDGGAYTLTDLrtIQDwIIRPQLRTVPG 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 171 ISSIDLYGGMKYALRVWLDPAKMAAFNLTATDVMGVLSANNyQSATGQAV---GEFVLFNgsADTQVSNVDELKNLVVKN 247
Cdd:TIGR00914 181 VAEVNSIGGYVKQFLVAPDPEKLAAYGLSLADVVNALERNN-QNVGAGYIerrGEQYLVR--APGQVQSMDDIRNIVIAT 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 248 ENGSVTRLSDIANVTLAKSHDTYRASANGQEAVVAAINAAPSANPINIAKDVLDILPELKRNMPSNISMNVMYDSTVAIN 327
Cdd:TIGR00914 258 GEGVPIRIRDVARVQIGKELRTGAATENGKEVVLGTVFMLIGENSRTVAQAVGDKLETINKTLPEGVEIVTTYDRSQLVD 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 328 ESIHEVIKTIVEAAVIVLVVITLFLGSFRAVIIPIVTIPLSLIGVAMVMQAMGFSWNLMTLLAmvLAIGLVVDDAIVVLE 407
Cdd:TIGR00914 338 AAIATVKKNLLEGALLVIVILFLFLGNIRAALIAATVIPLSLLITFIGMVFQGISANLMSLGA--LDFGLIVDGAVVIVE 415
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 408 NVDRHIKEG----------ESPFRAAIIGTREIAVPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGIIA 477
Cdd:TIGR00914 416 NAHRRLAEAqhhhgrqltlKERLHEVFAASREVRRPLIFGQLIITLVFLPIFTLTGVEGKMFHPMAFTVVLALAGAMILS 495
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 478 LTLSPMMCSKML--KANEKPNRfeqkVHHVLDKmtnRYEKMLGAVMQHRPVVIAFAIIVFGSLPVLFKFIPSELAPSEDK 555
Cdd:TIGR00914 496 LTFVPAAVALFIrgKVAEKENR----LMRVLKR---RYEPLLERVLAWPAVVLGAAAVSIVLVVWIASRVGGEFIPSLNE 568
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 556 GVVMLLGTGPSNANLDYLSNTMADVNKILSDQPEVQ--FAQVFTGV-------PNSNQAFGI-ASMVPWSQREASQAEVT 625
Cdd:TIGR00914 569 GDLAYQALRIPGTSLAQSVAMQQTLEKLIKSFPEVArvFAKTGTAEiatdpmpPNASDTYIIlKPESQWPEGKKTKEDLI 648
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 626 TRVGNLVKDIPGMA---VTAFQM--PELPGaGSGLPIQFVITTPNaFESLFTIATDVLTEVQSSPLFVYSNLDLNYDSAT 700
Cdd:TIGR00914 649 EEIQEATVRIPGNNyefTQPIQMrfNELIS-GVRSDVAVKVFGDD-LDDLDATAEKISAVLKGVPGAADVKVEQTTGLPY 726
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 701 MKINIDKDKAGAYGVTMQDIGVTLGTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMNNYYV-----RGADGKAVPL 775
Cdd:TIGR00914 727 LTVEIDREKAARYGLTVGDVQDTVATAVGGRMSGETFEGDRRFDIVIRLPESLRESPQALRQLPIplplsEDARKQFIPL 806
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 776 GSLISIDVIAEPRALPHFNQLNSATVGAvPSPGTAMGDAINWFEN--IAETKLPKGYNHDYMGEARQYVTEGSALYATFG 853
Cdd:TIGR00914 807 SDVADLRVSPGPNQISRENGKRRVVVSA-NVRGRDLGSFVDDAKKaiAEQVKLPPGYWITWGGQFEQLQSATKRLQIVVP 885
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 854 LALAIIFLVLAIQFESLKDPIVIMVSVPLAICGALIALAWGMATMNIYSQVGLITLVGLITKHG-ILICEVAKEEQLHNK 932
Cdd:TIGR00914 886 VTLLLIFVLLYAAFGNVKDALLVFTGIPFALTGGVFALWLRGIPLSISAAVGFIALSGVAVLNGlVMISFIRKLLEEGPS 965
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 764441443 933 LSriDAVMAAAKVRLRPILMTTAAMIAGLIPLMYATGAGAAQRFSIGIVIVAGLAIGTIFTLFVLPVIY 1001
Cdd:TIGR00914 966 LD--EAVYEGALTRVRPVLMTALVASLGFVPMAIATGTGAEVQRPLATVVIGGIITATLLTLFVLPALY 1032
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
281-1000 |
4.37e-18 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 89.92 E-value: 4.37e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 281 VAAINAAPSANPINIAKDVLDILPELKRNM----PSNISMNV--MYDSTVAINESIHEVIKTIVEAA-VIVLVVITLFLG 353
Cdd:COG1033 161 ATLIVVTLDPDPLSSDLDRKEVVAEIRAIIakyeDPGVEVYLtgFPVLRGDIAEAIQSDLAIFFPLAlLLILLLLFLFFR 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 354 SFRAVIIPIVTIPLSLIGVAMVMQAMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHIKEGESPFRAAIIGTREIAVP 433
Cdd:COG1033 241 SLRGVLLPLLVVLLAVIWTLGLMGLLGIPLSPLTILVPPLLLAIGIDYGIHLLNRYREERRKGLDKREALREALRKLGPP 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 434 VIAMTLTLGAVYAPIALMgGITgsLFKEFALTLAGSVFVSGIIALTLSPMMCSKMLKANEKpnrfeQKVHHVLDKMTNRY 513
Cdd:COG1033 321 VLLTSLTTAIGFLSLLFS-DIP--PIRDFGIVAAIGVLLAFLTSLTLLPALLSLLPRPKPK-----TRRLKKPPELGRLL 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 514 EKMLGAVMQHRPVVIAFAIIVFGSlpvlfkfipselapsedkGVVMLLGTGPSNANLDYLSntmadvnkilSDQPEVQFA 593
Cdd:COG1033 393 AKLARFVLRRPKVILVVALVLAVV------------------SLYGISRLKVEYDFEDYLP----------EDSPIRQDL 444
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 594 QVFtgvpnsNQAFGIASMVPWSqreasqaeVTTRVGNLVKDIPGM-AVTAFQ--MPELPGagsglpIQFVIttpnafeSL 670
Cdd:COG1033 445 DFI------EENFGGSDPLEVV--------VDTGEPDGLKDPEVLkEIDRLQdyLESLPE------VGKVL-------SL 497
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 671 ftiaTDVLTEVQSSplfvYSNLDLNYDsatmKINIDKDKAGAYGVTMQDigvtLGTMMADGYVNRidlngrsyevipqve 750
Cdd:COG1033 498 ----ADLVKELNQA----LNEGDPKYY----ALPESRELLAQLLLLLSS----PPGDDLSRFVDE--------------- 546
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 751 rkwrlnpesmnnyyvrgaDGKAVPLgslisidviaepralphfnqlnsaTVGAVPSPGTAMGDAINWFENIAETKLP-KG 829
Cdd:COG1033 547 ------------------DYSAARV------------------------TVRLKDLDSEEIKALVEEVRAFLAENFPpDG 584
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 830 YNHDYMGEAR------QYVTEGSALyaTFGLALAIIFLVLAIQFESLKDPIVIMvsVPLAIcgALIALAWGMATMNIYSQ 903
Cdd:COG1033 585 VEVTLTGSAVlfaainESVIESQIR--SLLLALLLIFLLLLLAFRSLRLGLISL--IPNLL--PILLTFGLMGLLGIPLN 658
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 904 VGLITL----VGLITKHGILICEVAKEEqLHNKLSRIDAVMAAAKVRLRPILMTTAAMIAGLIPLMYATGAGAAqrfSIG 979
Cdd:COG1033 659 IATAVVasiaLGIGVDYTIHFLSRYREE-RRKGGDLEEAIRRALRTTGKAILFTSLTLAAGFGVLLFSSFPPLA---DFG 734
|
730 740
....*....|....*....|.
gi 764441443 980 IVIVAGLAIGTIFTLFVLPVI 1000
Cdd:COG1033 735 LLLALGLLVALLAALLLLPAL 755
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
325-488 |
3.98e-14 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 76.82 E-value: 3.98e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 325 AINESI-HEVIKTIVEAAVIVLVVITLFLGSFRAVIIPIVTIPLSLIGVAMVMQAMGFSWNLMTLLAMVLAIGLVVDDAI 403
Cdd:COG1033 598 AINESViESQIRSLLLALLLIFLLLLLAFRSLRLGLISLIPNLLPILLTFGLMGLLGIPLNIATAVVASIALGIGVDYTI 677
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 404 VVLENVDRHIKEGESPFRAAIIGTREIAVPVIAMTLTLGAVYAPIALmggitgSLFK---EFALTLAGSVFVSGIIALTL 480
Cdd:COG1033 678 HFLSRYREERRKGGDLEEAIRRALRTTGKAILFTSLTLAAGFGVLLF------SSFPplaDFGLLLALGLLVALLAALLL 751
|
....*...
gi 764441443 481 SPMMCSKM 488
Cdd:COG1033 752 LPALLLLL 759
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
851-1023 |
2.25e-09 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 61.41 E-value: 2.25e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 851 TFGLALAIIFLVLAIQFESLKDPIVIMVSVplaicgaLIALAWGMATM-------NIYSQVGLITLVGLITKHGILICeV 923
Cdd:COG1033 223 FFPLALLLILLLLFLFFRSLRGVLLPLLVV-------LLAVIWTLGLMgllgiplSPLTILVPPLLLAIGIDYGIHLL-N 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 924 AKEEQLHNKLSRIDAVMAAAKVRLRPILMTTAAMIAGLIpLMYATGAGAAQRFsiGIVIVAGLAIGTIFTLFVLPVIYSY 1003
Cdd:COG1033 295 RYREERRKGLDKREALREALRKLGPPVLLTSLTTAIGFL-SLLFSDIPPIRDF--GIVAAIGVLLAFLTSLTLLPALLSL 371
|
170 180
....*....|....*....|
gi 764441443 1004 LAEKHKPLPVFVEDKDLEKL 1023
Cdd:COG1033 372 LPRPKPKTRRLKKPPELGRL 391
|
|
| ACR_tran |
pfam00873 |
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are ... |
701-1010 |
4.92e-08 |
|
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are involved in drug resistance. AcrB cooperates with a membrane fusion protein, AcrA, and an outer membrane channel TolC. The structure shows the AcrB forms a homotrimer.
Pssm-ID: 395701 [Multi-domain] Cd Length: 1021 Bit Score: 57.30 E-value: 4.92e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 701 MKINIDKDKAGAYGVTMQDIGVTLGTMMADGYVNRIDLNGRSYEVIPQVERKwrlNPESMNNYYVRGADGKAVPLGSLIS 780
Cdd:pfam00873 184 MRIWLDPQKLARYGLTLTDVVSALKEQNVNIGAGQLEGQGLQALIRAQGQLQ---SAEDFEKIIVKNQDGSPVRLRDVAT 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 781 IDVIAEPRALphFNQLNS--ATVGAVPS-PGT---AMGDAI-NWFENIAETkLPKGYNHDYMGEARQYVTEG-SALYATF 852
Cdd:pfam00873 261 VELGSELYRG--FATFNGkpAVGLGVQKlPGAnaiETADAVrAKLAELKPT-FPQGVEIVVVYDTTPFIRASiEEVVKTL 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 853 GLALAIIFLVLAIQFESLKDPIVIMVSVPLAICGALIALAWGMATMNIYSQVGLITLVGLITKHGILICEVAKEEQLHNK 932
Cdd:pfam00873 338 LEAIVLVILVMFLFLQNWRATLIPAIAIPLSLLGTFAVMKAFGFSINTLTLGGLVLAIGLVVDDAIVVVENIERVLEENG 417
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 764441443 933 LSRIDAVMAAAKVRLRPILMTTAAMIAGLIPLMYATGAGAAQRFSIGIVIVAGLAIGTIFTLFVLPVIYS-YLAEKHKP 1010
Cdd:pfam00873 418 LKPLEAAYKSMGEIGGALVAIALVLSAVFLPILFLGGLTGRIFRQFAITIVLAILLSVLVALTLTPALCAtLLKPRREP 496
|
|
| YdfJ |
COG2409 |
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function ... |
340-541 |
2.88e-07 |
|
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function prediction only];
Pssm-ID: 441964 [Multi-domain] Cd Length: 697 Bit Score: 54.77 E-value: 2.88e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 340 AAVIVLVVITLFLGSFRAVIIPIVTIPLSLIGVAMVMQAMG--FSWNLMTL-LAMVLAIGLVVDDAIVVlenVDRH---I 413
Cdd:COG2409 178 TLPVALVVLLLVFRSLVAALLPLLTAGLAVGVALGLLALLAafTDVSSFAPnLLTMLGLGVGIDYALFL---VSRYreeL 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 414 KEGESPFRAAIIGTREIAVPVIAMTLTLGavyapIALMG-GITG-SLFKEFALTLAGSVFVSGIIALTLSPMMCSKMLKA 491
Cdd:COG2409 255 RAGEDREEAVARAVATAGRAVLFSGLTVA-----IALLGlLLAGlPFLRSMGPAAAIGVAVAVLAALTLLPALLALLGRR 329
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 764441443 492 NEKPNRfeQKVHHVLDKMTNRYEKMLGAVMqHRPVVIAFAIIVF---GSLPVL 541
Cdd:COG2409 330 VFWPRR--PRRRRAAAPESGFWRRLARAVV-RRPVPVLVAAVAVllaLALPAL 379
|
|
| MMPL |
pfam03176 |
MMPL family; Members of this family are putative integral membrane proteins from bacteria. ... |
336-482 |
3.18e-07 |
|
MMPL family; Members of this family are putative integral membrane proteins from bacteria. Several of the members are mycobacterial proteins. Many of the proteins contain two copies of this aligned region. The function of these proteins is not known, although it has been suggested that they may be involved in lipid transport.
Pssm-ID: 308676 [Multi-domain] Cd Length: 332 Bit Score: 53.45 E-value: 3.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 336 TIVEAAVIVLVVITLFL--GSFRAVIIPIVTIPLSLI---GVAMVMQ---AMGFSWnLMTLLAMVLAIGLVVDDAIVVLE 407
Cdd:pfam03176 145 GLIEAVTLVVIFIILLIvyRSVVAALLPLLTVGLSLGaaqGLVAILAhilGIGLST-FALNLLVVLLIAVGTDYALFLVS 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 408 NVDRHIKEGESPFRAAIigtreiavpvIAMTLTLGAVYAPIALMGGITGSL-------FKEFALTLAGSVFVSGIIALTL 480
Cdd:pfam03176 224 RYREELRAGEDREEAVI----------RAVRGTGKVVTAAGLTVAIAMLALsfarlpvFAQVGPTIAIGVLVDVLAALTL 293
|
..
gi 764441443 481 SP 482
Cdd:pfam03176 294 LP 295
|
|
| 2A067 |
TIGR00921 |
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized ... |
337-549 |
4.10e-07 |
|
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. They fall into seven phylogenetic families, this family (2.A.6.7) consists of uncharacterised putative transporters, largely in the Archaea. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273340 [Multi-domain] Cd Length: 719 Bit Score: 54.07 E-value: 4.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 337 IVEAAVIVLVVITLFLgSFRAVIIPIVTIPLSLIGVAMVMQAMGF---SWNLMTLLAMVLAIGLVVDDAIVVLENVDRHI 413
Cdd:TIGR00921 197 TTMAISGILVVLVLLL-DFKRWWRPLLPLVIILFGVAWVLGIMGWlgiPLYATTLLAVPMLIGVGIDYGIQTLNRYEEER 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 414 KEGESPFRAAIIGTREIAVPVIAMTLTLGAVYAPIALMGgitGSLFKEFALTLAGSVFVSGIIALTLSPMMCSKMLKANE 493
Cdd:TIGR00921 276 DIGRAKGEAIVTAVRRTGRAVLIALLTTSAGFAALALSE---FPMVSEFGLGLVAGLITAYLLTLLVLPALLQSIDIGRE 352
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 764441443 494 KPNRFEQKVHHVLDKMTNRYEKMLGAVMQHrPV---VIAFAIIVFG-----SLPV---LFKFIPSEL 549
Cdd:TIGR00921 353 KVKKEIIAIGGKSSEIEEELSKVLSITVRH-PVpalVAALIITGLGlygaaGIKPevnIEKFIPQDL 418
|
|
| HpnN |
TIGR03480 |
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing ... |
336-618 |
1.31e-06 |
|
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing members of this family share the machinery for the biosynthesis of hopanoid lipids. Furthermore, the genes of this family are usually located proximal to other components of this biological process. The proteins appear to be related to the RND family of export proteins, particularly the hydrophobe/amphiphile efflux-3 (HAE3) family represented by TIGR00921.
Pssm-ID: 274598 [Multi-domain] Cd Length: 862 Bit Score: 52.69 E-value: 1.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 336 TIVEAAVIVLVVITLFLG--SFRAVIIPIVTIPLSLIGVAMVMQAMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHI 413
Cdd:TIGR03480 272 TVAGLLSFVLVLVLLWLAlrSPRLVFAVLVTLIVGLILTAAFATLAVGHLNLISVAFAVLFIGLGVDFAIQFSLRYREER 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 414 KEGESPFRAAIIGTREIAVPVIAMTLTLGA--------VYAPIALMGGITGslfkefaltlaGSVFVSGIIALTLSP--M 483
Cdd:TIGR03480 352 FRGGNHREALSVAARRMGAALLLAALATAAgffaflptDYKGVSELGIIAG-----------TGMFIALFVTLTVLPalL 420
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 484 MCSKML-KANEKPNRFEQKVHHVLDKmtnryekmlgavmQHRPVVIAFAIIVFGSLPVL----FKFIPSELAPSEDKGVV 558
Cdd:TIGR03480 421 RLLRPPrRRKPPGYATLAPLDAFLRR-------------HRRPVLGVTLILGIAALALLpqlrFDFNPLNLQDPKTESVR 487
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 764441443 559 MLLGTGPSNANLDYLSNTMAdvnkilSDQPEVQ-FAQVFTGVPNSNQAFGIASMVPWSQRE 618
Cdd:TIGR03480 488 TFLELLADPDTSPYSAEVLA------PSAPEARaLTERLEALPEVDQVVTLPDFVPDDQEA 542
|
|
| 2A0601 |
TIGR00914 |
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation ... |
161-495 |
2.77e-06 |
|
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation antiporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 129992 [Multi-domain] Cd Length: 1051 Bit Score: 51.69 E-value: 2.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 161 INPQLYSINGISSI--DLYGGMKYaLRVWLDPAKMAAFNLTATDVMGVLSAnnyqSATGQAVGEFvlFNGSA-------- 230
Cdd:TIGR00914 703 ISAVLKGVPGAADVkvEQTTGLPY-LTVEIDREKAARYGLTVGDVQDTVAT----AVGGRMSGET--FEGDRrfdivirl 775
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 231 -DTQVSNVDELKNLVV---KNENGSVTR--LSDIANVTLAKShDTYRASANGQEAVVAAINAApsanpiniAKDVLDILP 304
Cdd:TIGR00914 776 pESLRESPQALRQLPIplpLSEDARKQFipLSDVADLRVSPG-PNQISRENGKRRVVVSANVR--------GRDLGSFVD 846
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 305 ELKRNMPSNIS----MNVMYDSTVAINESIHEVIKTIVEAAVIvLVVITLFL--GSFRAVIIPIVTIPLSLIGVAMVMQA 378
Cdd:TIGR00914 847 DAKKAIAEQVKlppgYWITWGGQFEQLQSATKRLQIVVPVTLL-LIFVLLYAafGNVKDALLVFTGIPFALTGGVFALWL 925
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 379 MGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHIKEGESPFRAAIIGTREIAVPVIAMTLTLGAVYAPIALMGGITGSL 458
Cdd:TIGR00914 926 RGIPLSISAAVGFIALSGVAVLNGLVMISFIRKLLEEGPSLDEAVYEGALTRVRPVLMTALVASLGFVPMAIATGTGAEV 1005
|
330 340 350
....*....|....*....|....*....|....*..
gi 764441443 459 FKEFALTLAGSVFVSGIIALTLSPMMCSKMLKANEKP 495
Cdd:TIGR00914 1006 QRPLATVVIGGIITATLLTLFVLPALYRLVHRRRHKG 1042
|
|
| 2A067 |
TIGR00921 |
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized ... |
821-1000 |
1.19e-05 |
|
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. They fall into seven phylogenetic families, this family (2.A.6.7) consists of uncharacterised putative transporters, largely in the Archaea. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273340 [Multi-domain] Cd Length: 719 Bit Score: 49.45 E-value: 1.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 821 IAETKLPKGYNHDYMGE-ARQYVTE---GSALYATFGLALAIIFLVLAIQFESLKDPIVIMVSVPLAICGALIALAWGMA 896
Cdd:TIGR00921 164 LERTNPPSGKFLDVTGSpAINYDIErefGKDMGTTMAISGILVVLVLLLDFKRWWRPLLPLVIILFGVAWVLGIMGWLGI 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 897 TMNIYSQVGLITLVGLITKHGILIcEVAKEEQLHNKLSRIDAVMAAAKVRLRPILMTTAAMIAGLIPlMYATGAGAAQRF 976
Cdd:TIGR00921 244 PLYATTLLAVPMLIGVGIDYGIQT-LNRYEEERDIGRAKGEAIVTAVRRTGRAVLIALLTTSAGFAA-LALSEFPMVSEF 321
|
170 180
....*....|....*....|....
gi 764441443 977 siGIVIVAGLAIGTIFTLFVLPVI 1000
Cdd:TIGR00921 322 --GLGLVAGLITAYLLTLLVLPAL 343
|
|
| COG4258 |
COG4258 |
Predicted exporter [General function prediction only]; |
853-1012 |
8.91e-05 |
|
Predicted exporter [General function prediction only];
Pssm-ID: 443400 [Multi-domain] Cd Length: 783 Bit Score: 46.38 E-value: 8.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 853 GLALAIIFLVLAIQFESLKDPIVIMVSVplaICGALIALAwgmATMNIYSQVGLITLV---GLItkhGILI-------Ce 922
Cdd:COG4258 256 LISLLGILLLLLLVFRSLRPLLLGLLPV---AVGALAGLA---AVSLVFGSVHGITLGfgsSLI---GVAVdyslhylT- 325
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 923 vakeEQLHNKLSRIDAVMAAAkvrLRPILMTTAAMIAGLIPLMYATGAGAAQrfsIGIVIVAGLAIGTIFTLFVLPVIYS 1002
Cdd:COG4258 326 ----HRRAAGEWDPRAALRRI---WPTLLLGLLTTVLGYLALLFSPFPGLRQ---LGVFAAAGLLAAALTTLLWLPLLLP 395
|
170
....*....|
gi 764441443 1003 YLAEKHKPLP 1012
Cdd:COG4258 396 RAAPRPPAPA 405
|
|
| secD |
TIGR01129 |
protein-export membrane protein SecD; Members of this family are highly variable in length ... |
328-481 |
2.46e-04 |
|
protein-export membrane protein SecD; Members of this family are highly variable in length immediately after the well-conserved motif LGLGLXGG at the amino-terminal end of this model. Archaeal homologs are not included in the seed and score between the trusted and noise cutoffs. SecD from Mycobacterium tuberculosis has a long Pro-rich insert. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273456 [Multi-domain] Cd Length: 397 Bit Score: 44.59 E-value: 2.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 328 ESIHEVIKTIVEAAVIVLVVITLFLGSFRavIIPIVTIPLSLIGVAMVMQAMGFSWNLMTLLAMVLAIGLVVDDAIVVLE 407
Cdd:TIGR01129 245 DSIEAGIKAGLIGLVLVLVFMILYYRLFG--LIAAIALVINIVLILAILSAFGATLTLPGIAGLILTIGMAVDANVLIYE 322
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 764441443 408 NVDRHIKEGESPFRAAIIGTREIAVPVIAMTLTLgaVYAPIALMGGITGSLfKEFALTLAGSVFVSGIIALTLS 481
Cdd:TIGR01129 323 RIKEELRLGKSVRQAIEAGFERAFSTIFDANITT--LIAALILYVFGTGPV-KGFAVTLAIGIIASLFTALVFT 393
|
|
| COG4258 |
COG4258 |
Predicted exporter [General function prediction only]; |
340-412 |
5.41e-04 |
|
Predicted exporter [General function prediction only];
Pssm-ID: 443400 [Multi-domain] Cd Length: 783 Bit Score: 44.07 E-value: 5.41e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 764441443 340 AAVIVLVVITLFLGSFRAVIIPIVTIPLSLIGVAMVMQAMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRH 412
Cdd:COG4258 648 ALLLILLLLLLRLRSLRRALRVLLPPLLAVLLTLAILGLLGIPLNLFHLIALLLVLGIGIDYALFFTEGLLDK 720
|
|
| PRK13024 |
PRK13024 |
bifunctional preprotein translocase subunit SecD/SecF; Reviewed |
332-544 |
8.66e-04 |
|
bifunctional preprotein translocase subunit SecD/SecF; Reviewed
Pssm-ID: 237276 [Multi-domain] Cd Length: 755 Bit Score: 43.30 E-value: 8.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 332 EVIKTIVEAAVIVLVVITLF------LGSFRAVIIPIVTIPLSLIgvamVMQAMGFSWNLMTLLAMVLAIGLVVDDAIVV 405
Cdd:PRK13024 263 DAIDAGIIAGIIGFALIFLFmlvyygLPGLIANIALLLYIFLTLG----ALSSLGAVLTLPGIAGLVLGIGMAVDANVLI 338
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 406 LENVDRHIKEGESPFRAAIIGTREIAVPVIAMTLTLGavyapiaLMGGI-----TGSLfKEFALTLAGSVFVSGIIALTL 480
Cdd:PRK13024 339 FERIKEELRKGKSLKKAFKKGFKNAFSTILDSNITTL-------IAAAIlfffgTGPV-KGFATTLIIGILASLFTAVFL 410
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 764441443 481 SPMMCSKMLKANEK-PNRFEQKVHHVLDKMTNRYEKMLGAVMQHRPVVIAF-AIIVFGSLPVLFKF 544
Cdd:PRK13024 411 TRLLLELLVKRGDKkPFLFGVKKKKIHNINEGVTIFDRIDFVKKRKWFLIFsIVLVIAGIIIFFIF 476
|
|
| 2A0604s01 |
TIGR00916 |
protein-export membrane protein, SecD/SecF family; The SecA,SecB,SecD,SecE,SecF,SecG and SecY ... |
331-473 |
2.17e-03 |
|
protein-export membrane protein, SecD/SecF family; The SecA,SecB,SecD,SecE,SecF,SecG and SecY proteins form the protein translocation appartus in prokaryotes. This family is specific for the SecD and SecF proteins. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273336 [Multi-domain] Cd Length: 192 Bit Score: 40.32 E-value: 2.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 331 HEVIKTIVEAAVIVLVVITLFLGSF---RAVIIPIVTIPLSLIGVAMVMQAMGFSWNLMTLLAMVLAIGLVVDDAIVVLE 407
Cdd:TIGR00916 43 GELIKAGIIALLIGLVLVLLYMLLRyewRGAIAAIAALVHDVILILGVLSLFGATLTLPGIAGLLTIIGYSVDDTVVIFD 122
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 764441443 408 NV--DRHIKEGESPFRAAIIGTREIAVPVIAMTLTLGAVYAPIALMGGitGSLfKEFALTLAGSVFVS 473
Cdd:TIGR00916 123 RIreELRKYKGRTFREAINLGINQTLSRIIDTNVTTLLAVLALYVFGG--GAI-KGFALTLGIGVIAG 187
|
|
| SecD |
COG0342 |
Preprotein translocase subunit SecD [Intracellular trafficking, secretion, and vesicular ... |
328-484 |
2.17e-03 |
|
Preprotein translocase subunit SecD [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440111 [Multi-domain] Cd Length: 434 Bit Score: 41.64 E-value: 2.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 328 ESIHEVIKTIVEAAVIVLVVITLFLGSFRaVIIPIVTIpLSLIGVAMVMQAMGFSWNLMTLLAMVLAIGLVVDDAIVVLE 407
Cdd:COG0342 268 DSIEKGLIAGLIGLLLVALFMLLYYRLPG-LVANIALA-LNVVLLLGVLSLLGATLTLPGIAGIILTIGMAVDANVLIFE 345
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 408 NVDRHIKEGESPFRAAIIGTREiAVPVI---AMTLTLGAVyaPIALMGgiTGSLfKEFALTLAGSVFVSGIIALTLSPMM 484
Cdd:COG0342 346 RIREELRAGRSLRAAIEAGFKR-AFSTIldaNVTTLIAAV--VLFVLG--TGPV-KGFAVTLILGILISMFTAVPVTRPL 419
|
|
| PRK12911 |
PRK12911 |
bifunctional preprotein translocase subunit SecD/SecF; Reviewed |
847-1007 |
5.46e-03 |
|
bifunctional preprotein translocase subunit SecD/SecF; Reviewed
Pssm-ID: 171815 [Multi-domain] Cd Length: 1403 Bit Score: 41.00 E-value: 5.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 847 ALYATFGlALAIIFLVLAIQFE--SLKDPIVIMVSVPLAICGALIALAWGMATMNIYSQ-VG-LITLVGLITKHGILICE 922
Cdd:PRK12911 1236 AVIALFG-ALGIILLYVSLRFEwrYAFSAICALIHDLLATCAVLVALHFFLQKIQIDLQaIGaLMTVLGYSLNNTLIIFD 1314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 923 VAKEEQLHNKLSRIDAVMA-AAKVRLRPILMTTAAMIAGLIPLMYatgAGAAQRFSIGIVIVAGLAIGTIFTLFVLPVIY 1001
Cdd:PRK12911 1315 RIREDRQEKLFTPMPILINdALQKTLGRTVMTTATTLSVLLILLF---VGGGSIFNFAFIMTIGILLGTLSSLYIAPPLL 1391
|
....*.
gi 764441443 1002 SYLAEK 1007
Cdd:PRK12911 1392 LFMVRK 1397
|
|
| PRK13023 |
PRK13023 |
protein translocase subunit SecDF; |
340-497 |
6.45e-03 |
|
protein translocase subunit SecDF;
Pssm-ID: 171842 [Multi-domain] Cd Length: 758 Bit Score: 40.37 E-value: 6.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 340 AAVIVLVVITLFLGSFRAV------IIPIVTIPLSLIGVAMVMQAMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHI 413
Cdd:PRK13023 279 AAVLAALLAALVVGLFMVLsygilgVIALVALVVNIIILTAVLSLIGASISLASIAGLVLTIGLAVDAHILIYERVREDR 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 414 KEGESPFRAAIIGTREIAVPVIAMTLTLGAVYAPIALMGGITgslFKEFALTLAGSVFVSGIIALTLSPMMCSKML---K 490
Cdd:PRK13023 359 RKGYSVVQAMESGFYRALSTIVDANLTTLIAALVLFLLGSGT---VHGFALTVAIGIGTTLFTTLTFTRLLIAQWVrtaK 435
|
....*..
gi 764441443 491 ANEKPNR 497
Cdd:PRK13023 436 PKEVPKR 442
|
|
| YdfJ |
COG2409 |
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function ... |
853-998 |
6.57e-03 |
|
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function prediction only];
Pssm-ID: 441964 [Multi-domain] Cd Length: 697 Bit Score: 40.52 E-value: 6.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 764441443 853 GLALAIIFLVLAIQFESLKDPIVIMVSVPLAICGALIALAW--GMATMNIYSQvGLITLVGL--ITKHGILIceVAKE-E 927
Cdd:COG2409 176 LITLPVALVVLLLVFRSLVAALLPLLTAGLAVGVALGLLALlaAFTDVSSFAP-NLLTMLGLgvGIDYALFL--VSRYrE 252
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 764441443 928 QLHNKLSRIDAVMAAAKVRLRPILMTTAAMIAGLIPLMyATGAGAAQrfSIGIVIVAGLAIGTIFTLFVLP 998
Cdd:COG2409 253 ELRAGEDREEAVARAVATAGRAVLFSGLTVAIALLGLL-LAGLPFLR--SMGPAAAIGVAVAVLAALTLLP 320
|
|
| |
