|
Name |
Accession |
Description |
Interval |
E-value |
| AcrB |
COG0841 |
Multidrug efflux pump subunit AcrB [Defense mechanisms]; |
7-1026 |
0e+00 |
|
Multidrug efflux pump subunit AcrB [Defense mechanisms];
Pssm-ID: 440603 [Multi-domain] Cd Length: 1015 Bit Score: 951.85 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 7 IIAWFARNNVAANLLMWILLIGGIFSAFLINKEVFPSFELNYLRISVAYPGAAPQEIEEGITIKIEEAIQDISGIKKVTS 86
Cdd:COG0841 3 LSRFFIRRPVAAIVLSLLILLAGLLAYLRLPVEQFPDIDPPTVTVSTTYPGASPEEVESTVTTPIEEALNGVEGIKYITS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 87 VASEGVGSVTIEVEDGYDAKEVLDEAKLRVDAI-ATFPANIEKPDIYRIKPENN-VIWVSVYGD-MTLHDMKELAK-EIR 162
Cdd:COG0841 83 TSSEGSSSITVEFELGTDIDEALVDVQNAVDRArSDLPEDVEPPGVTKVNPSDFpVMVLALSSDdLDELELSDYAErNIK 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 163 DEITNLPAVTRAEVTGVRDYEIGIEVSEDKLREYGLTFTQVAQAVQNTSIDLPGGSIRAQDGDILLRTKGQAYTGDDFAN 242
Cdd:COG0841 163 DRLERVPGVGQVQIFGGREREIRIWLDPDKLAAYGLTLADVANAIRAQNVDVPAGRIGGGDREYTVRTNGRLKTPEEFEN 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 243 IVVSTRaDGSRVMLPMVAEIKDDFEERLEYTRFDGMPAAIIEITSIDDQNALAIADQVKGFIAERQATLPSGAKLDYWGD 322
Cdd:COG0841 243 IVIRTN-DGSVVRLGDVARVEDGAEDYRSIARLNGKPAVGLAIQKQPGANALEVADAVRAKLEELQASLPEGVELTIVYD 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 323 LTHYLKGRLNMMLSNMFMGALLVFIILALFL-DLKLAFWVMLGLPVCFLGAMALMPMepFGLSINMLTLFAFILVLGIVV 401
Cdd:COG0841 322 QSEFIRASIEEVVKTLLEAILLVVLVVFLFLrSWRATLIPAVAIPVSLIGTFAVMYL--LGFSLNILTLFALVLAIGIVV 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 402 DDAIVIGESAHTEVERHGHSITNVIRGAKKVAMPATFGVLTTIAAFIPMLMVPGPMGIIWKSIGMIVILCLAFSLVESKF 481
Cdd:COG0841 400 DDAIVVVENIERHMEEGLSPLEAAIKGAREVAGAVIASTLTLVAVFLPLAFMGGITGQLFRQFALTVAIALLISLFVALT 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 482 ILPAHLAHM-KPSKPNPNPGPFGRFKRAFNekvqhFIHHSYRNFMERMIPHRYTLVAGFIGVLILSVAMVtsGKVRWVFF 560
Cdd:COG0841 480 LTPALCARLlKPHPKGKKGRFFRAFNRGFD-----RLTRGYGRLLRWALRHRKLTLLVALALLALSVLLF--GRLPTEFF 552
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 561 PDIPSDFIQVNLEMDEGSSELNTLDVVQKIENALYTMnqqmeseigyPVVKHSF------INMSSRTSAFIFAELTKGED 634
Cdd:COG0841 553 PEEDQGQIIVSVQLPPGTSLERTEAVVRQVEEILLEV----------PEVESVFsvvgfsGGGSGSNSGTIFVTLKPWDE 622
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 635 RDVDGVTIAEAWRKQLPDLVAVKKLNINASTND--AGGDISFRFTSTDLEQLSAAAKELKQKLASYEGVYDIADNFSSGS 712
Cdd:COG0841 623 RDRSADEIIARLREKLAKIPGARVFVFQPPAGGlgSGAPIEVQLQGDDLEELAAAAEKLLAALRQIPGLVDVRSDLQLGK 702
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 713 HEIRLKI-RPEAEALGLTLSDLARQVRYGFYGYEAQRILRNKEEVKVMVRYPLEQRRTIGHLENMMIRTPNGMAVPFSTV 791
Cdd:COG0841 703 PELQLDIdREKAAALGVTVADVASTLRAALGGRYVNDFNRGGREYDVRVQAPEEDRNSPEDLENLYVRTPDGEMVPLSSV 782
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 792 AELELGESYSSITRVDGRRAITVTANANkDKVEPSKVVQEIQEKF----MPelerkyPHISASLDGASQDEQAAMVGLLQ 867
Cdd:COG0841 783 ATIEEGTGPSSINRYNGQRSVTVSANLA-PGVSLGEALAAIEELAaelkLP------PGVSIEFTGQAEEEQESFSSLGL 855
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 868 GFFFAIFTIYALMAIPLKSYSQPLIIMSVIPFGMIGALFGHFILGLSMSILSLCGIVALAGVVVNDSLILVDFVNRAREQ 947
Cdd:COG0841 856 AFLLALLLVYLVLAAQFESFIQPLIILLTVPLALIGALLGLLLTGTPLNIYSQIGLIMLIGIVVKNAILLVDFANQLREE 935
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 765522869 948 GQSVVKAAIDSGCYRFRAIILTSLTTFVGLVPIIMERSLQAQIVIPMATSLAFGILFSTLVTLILVPMLYIILDDLSHK 1026
Cdd:COG0841 936 GMSLREAILEAARLRLRPILMTSLATILGLLPLALGTGAGAEFRQPLGIAVIGGLLFSTLLTLFVVPVLYVLLDRLRRR 1014
|
|
| ACR_tran |
pfam00873 |
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are ... |
7-1021 |
9.27e-155 |
|
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are involved in drug resistance. AcrB cooperates with a membrane fusion protein, AcrA, and an outer membrane channel TolC. The structure shows the AcrB forms a homotrimer.
Pssm-ID: 395701 [Multi-domain] Cd Length: 1021 Bit Score: 485.65 E-value: 9.27e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 7 IIAWFARNNVAANLLMWILLIGGIFSAFLINKEVFPSFELNYLRISVAYPGAAPQEIEEGITIKIEEAIQDISGIKKVTS 86
Cdd:pfam00873 1 MSKFFIRRPIFTLVLAIAILLAGILSFFSLPVDAFPEIAPPTVQVSTSYPGASPEEVEDTVTQPIEQAMNGLDGLKYMSS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 87 VASEGVGSVTIEVEDGYDakevLDEAklRVDAIATF-------PANIEKPDIYRIKPENNVIWV----SVYGDMTLHDMK 155
Cdd:pfam00873 81 QSSYGLSSITLTFELGTD----IDIA--RQDVQNRLqlatpllPEGVQRPGISVIKTSLGPIMVlavtSPDGSYTQTDLR 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 156 ELAK-EIRDEITNLPAVTRAEVTGVRDYEIGIEVSEDKLREYGLTFTQVAQAVQNTSIDLPGGSIRAQDGDILLRTKGQA 234
Cdd:pfam00873 155 DYADtNIKPQLSRVPGVGDVQLFGGSEYAMRIWLDPQKLARYGLTLTDVVSALKEQNVNIGAGQLEGQGLQALIRAQGQL 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 235 YTGDDFANIVVSTrADGSRVMLPMVAEIKDDFEERLEYTRFDGMPAAIIEITSIDDQNALAIADQVKGFIAERQATLPSG 314
Cdd:pfam00873 235 QSAEDFEKIIVKN-QDGSPVRLRDVATVELGSELYRGFATFNGKPAVGLGVQKLPGANAIETADAVRAKLAELKPTFPQG 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 315 AKLDYWGDLTHYLKGRLNMMLSNMFMGALLVFIILALFL-DLKLAFWVMLGLPVCFLGAMALMPMepFGLSINMLTLFAF 393
Cdd:pfam00873 314 VEIVVVYDTTPFIRASIEEVVKTLLEAIVLVILVMFLFLqNWRATLIPAIAIPLSLLGTFAVMKA--FGFSINTLTLGGL 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 394 ILVLGIVVDDAIVIGESAHTEVERHG-HSITNVIRGAKKVAMPATFGVLTTIAAFIPMLMVPGPMGIIWKSIGMIVILCL 472
Cdd:pfam00873 392 VLAIGLVVDDAIVVVENIERVLEENGlKPLEAAYKSMGEIGGALVAIALVLSAVFLPILFLGGLTGRIFRQFAITIVLAI 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 473 AFSLVESKFILPAHLAHM-KPSKPNPNPGPFGRFKRAFnekvqHFIHHSYRNFMERMIPHRYTLVAGFIGVLILSVAMVT 551
Cdd:pfam00873 472 LLSVLVALTLTPALCATLlKPRREPKHGGFFRWFNRMF-----DRLTRGYAKLLAKVLRHTAVVLLVALLLVVGSVWLFV 546
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 552 S-GKVrwvFFPDIPSDFIQVNLEMDEGSSELNTLDVVQKIENALyTMNQQMESEIGYPVVKHSFINMS-SRTSAFI---- 625
Cdd:pfam00873 547 RiPTE---FLPEEDEGVFVTSAQLPPGVSLDQTQRVMKQVEKIL-KEKPEVESVFAVTGFAFSGDNNGpNSGDAFIslkp 622
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 626 FAElTKGEDRDVDGVtIAEAWRK--QLPD----LVAVKKLNINASTNDAGGDISFRFTSTDLEQLSAAAKELKQKLASYE 699
Cdd:pfam00873 623 WKE-RPGPEKSVQAL-IERLRKAlkQIPGanvfLFQPIQLRGLGTISGFRSDLQVKIFGDDLDALDEARNQILAALAQLP 700
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 700 GVYDIADNFSSGSHEIRLKI-RPEAEALGLTLSDLARQVRYGFYGYEAQRILRNKEEVKVMVRYPLEQRRTIGHLENMMI 778
Cdd:pfam00873 701 GLSDVRSDGQEDQPQLQVNIdREKAARLGVSIQDINDTLSTALGGSYVNDFPEGGRVYDVVVQLPEDFRSSPEDIGQLYV 780
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 779 RTPNGMAVPFSTVAELELGESYSSITRVDGRRAITVTANANKDKVepSKVVQEIQEKFMPELERKyPHISASLDGASQDE 858
Cdd:pfam00873 781 RNPYGKMIPLSAFAKIEWGYGPPSINRYNGFRSIVISGNVAAGDS--LGDAMEAMAQIAKQVKLP-PGYGYTWTGQFEQE 857
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 859 QAAMVGLLQGFFFAIFTIYALMAIPLKSYSQPLIIMSVIPFGMIGALFGHFILGLSMSILSLCGIVALAGVVVNDSLILV 938
Cdd:pfam00873 858 QLAGNSLPILIALALLVVFLVLAALYESWSDPLSIMLTVPLALVGALLALWLRGLPNSVYAQVGLILLIGLAVKNAILMV 937
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 939 DFVNRAREQGQSVVKAAIDSGC-YRFRAIILTSLTTFVGLVPIIMERSLQAQIVIPMATSLAFGILFSTLVTLILVPMLY 1017
Cdd:pfam00873 938 EFANELREQEGKSLEEAILEACrLRLRPILMTALAAILGVLPLALSTGAGSELQQPLGIVVFGGLVTSTVLTLLVVPVFY 1017
|
....
gi 765522869 1018 IILD 1021
Cdd:pfam00873 1018 VLFH 1021
|
|
| CusA |
COG3696 |
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism]; |
7-1043 |
3.60e-114 |
|
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism];
Pssm-ID: 442911 [Multi-domain] Cd Length: 1031 Bit Score: 377.83 E-value: 3.60e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 7 IIAWFARNNVAANLLMWILLIGGIFSAFLINKEVFPSFELNYLRISVAYPGAAPQEIEEGITIKIEEAIQDISGIKKVTS 86
Cdd:COG3696 5 IIRFSLRNRLLVLLLTLLLAAAGIYSLRRLPIDAFPDITNVQVQVITEAPGLSPEEVEQQVTYPIETALNGLPGVKEVRS 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 87 VASEGVGSVTIEVEDGYDakevLDEAKLRV-----DAIATFPANIEK---PD------IYRIkpennVIwVSVYGDMTLH 152
Cdd:COG3696 85 ISRFGLSVVTVIFEDGTD----IYWARQLVlerlqQVREQLPAGVTPelgPIstglgeIYQY-----TL-ESDPGKYSLM 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 153 DMKELAK-EIRDEITNLPAVtrAEVTG----VRDYEIgiEVSEDKLREYGLTFTQVAQAVQNTSIDLPGGSIRAQDGDIL 227
Cdd:COG3696 155 ELRTLQDwVIRPQLRSVPGV--AEVNSfggfVKQYQV--LVDPAKLRAYGLTLDDVIEALERNNANVGGGYIERGGQEYL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 228 LRTKGQAYTGDDFANIVVSTRaDGSRVMLPMVAEIKDDFEERLEYTRFDGM-PAAIIEITSIDDQNALAIADQVKGFIAE 306
Cdd:COG3696 231 VRGIGLIRSLEDIENIVVKTR-NGTPVLLRDVAEVRIGPAPRRGAATLNGEgEVVGGIVLMLKGENALEVIEAVKAKLAE 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 307 RQATLPSGAKLD--YwgDLTHYLKGRLNMMLSNMFMGALLVFIILALFL-DLKLAFWVMLGLPVCFLgaMALMPMEPFGL 383
Cdd:COG3696 310 LKPSLPEGVKIVpfY--DRSDLIDRAIHTVTKNLLEGALLVILVLFLFLgNLRAALIVALAIPLSLL--FAFIVMRLFGI 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 384 SINMLTLFAFILVLGIVVDDAIVIGESAHTEVERHGHSITN------VIRGAKKVAMPATFGVLTTIAAFIPMLMVPGPM 457
Cdd:COG3696 386 SANLMSLGGLAIDFGIIVDGAVVMVENILRRLEENRAAGTPrerlevVLEAAREVRRPIFFATLIIILVFLPIFTLEGVE 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 458 GIIWKSIGMIVILCLAFSLVESKFILPAhLAHM-----KPSKPNPnpgpfgrfkrafnekVQHFIHHSYRNFMERMIPHR 532
Cdd:COG3696 466 GKLFRPMALTVIFALLGALLLSLTLVPV-LASLllrgkVPEKENP---------------LVRWLKRLYRPLLRWALRHP 529
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 533 YTLVAGFIGVLILSVAMvtsgkvrwvfFPDIPSDFIQvnlEMDEGS-----------SELNTLDVVQKIENALYTmnqqm 601
Cdd:COG3696 530 KLVLAVALVLLVLALAL----------FPRLGSEFLP---ELDEGDllvmatlppgiSLEESVELGQQVERILKS----- 591
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 602 eseigYPVVKHSF--------------INMSSrtsafIFAEL------TKGEDRDvdgvTIAEAWRKQLPDLVAVK---- 657
Cdd:COG3696 592 -----FPEVESVVsrtgraedatdpmgVNMSE-----TFVILkprsewRSGRTKE----ELIAEMREALEQIPGVNfnfs 657
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 658 ---KLNINASTNDAGGDISFRFTSTDLEQLSAAAKELKQKLASYEGVYDIADNFSSGSHEIRLKIRPEAEA-LGLTLSDL 733
Cdd:COG3696 658 qpiQMRVDELLSGVRADVAVKIFGDDLDVLRRLAEQIEAVLKTVPGAADVQVERVTGLPQLDIRIDRDAAArYGLNVADV 737
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 734 ARQVRYGFYGYEAQRILRNKEEVKVMVRYPLEQRRTIGHLENMMIRTPNGMAVPFSTVAELELGESYSSITRVDGRRAIT 813
Cdd:COG3696 738 QDVVETAIGGKAVGQVYEGERRFDIVVRLPEELRDDPEAIRNLPIPTPSGAQVPLSQVADIEVVEGPNQISRENGRRRIV 817
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 814 VTAN-ANKDKVEpskVVQEIQEKFMPELerKYPH-ISASLDGASQDEQAAMVGLLQGFFFAIFTIYALMAIPLKSYSQPL 891
Cdd:COG3696 818 VQANvRGRDLGS---FVAEAQAKVAEQV--KLPPgYYIEWGGQFENLQRATARLAIVVPLALLLIFLLLYLAFGSVRDAL 892
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 892 IIMSVIPFGMIGALFGHFILGLSMSILSLCGIVALAGVVVNDSLILVDFVNRAREQGQSVVKAAIDSGCYRFRAIILTSL 971
Cdd:COG3696 893 LILLNVPFALIGGVLALWLRGMPLSVSAGVGFIALFGVAVLNGVVLVSYINQLRAEGLDLREAIIEGALERLRPVLMTAL 972
|
1050 1060 1070 1080 1090 1100 1110
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 765522869 972 TTFVGLVPIIMERSLQAQIVIPMATSLAFGILFSTLVTLILVPmlyiilddlshksrALYHWWWRPKEAEAQ 1043
Cdd:COG3696 973 VAALGLLPMALSTGPGSEVQRPLATVVIGGLITSTLLTLLVLP--------------ALYLLFGRRRLRRAA 1030
|
|
| RND_permease_2 |
NF033617 |
multidrug efflux RND transporter permease subunit; |
9-1021 |
1.15e-109 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 411236 [Multi-domain] Cd Length: 1009 Bit Score: 365.11 E-value: 1.15e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 9 AWFARNNVAANLLMWILLIGGIFSAFLINKEVFPSFELNYLRISVAYPGAAPQEIEEGITIKIEEAIQDISGIKKVTSVA 88
Cdd:NF033617 2 DVFIKRPVATLLLSLLILLLGLLAFRKLPVREYPEVDFPTITVSTSYPGASPELMQSSITQPLEQQLAQIEGIDEMTSQS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 89 SEGVGSVTIEVEDGYDAKEVLDEAKLRVDAIAT-FPANIEKPDIYRIKPENN--VIWVSVYGDM----TLHDMKELAkeI 161
Cdd:NF033617 82 SLGYSTITLQFRLGTDLDVALSEVQAAINAAQSlLPSEAPDPPVYRKANSADtpIMYIGLTSEEmprgQLTDYAERV--L 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 162 RDEITNLPAVTRAEVTGVRDYEIGIEVSEDKLREYGLTFTQVAQAVQNTSIDLPGGSIRAQDGDILLRTKGQAYTGDDFA 241
Cdd:NF033617 160 APKLSQINGVGSVDVSGGQRPAMRVWLDPEKMAARGLTADDVRSALNSNNVNSPKGAVRGDSVVSTVRANDQLKTAEDYE 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 242 NIVVSTRADGSRVMLPMVAEIKDDFEERLEYTRFDGMPAAIIEITSIDDQNALAIADQVKGFIAERQATLPSGAKLDYWG 321
Cdd:NF033617 240 DLVIKYADNGAPVRLGDVATVELGAENVRNRAWANGVPAVVLGINRQPGANPIEVADEIRALLPELQETLPKNIKVNVLY 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 322 DLTHYLKGRLNMMLSNMFMGALLVFIILALFL-DLKLAFWVMLGLPVCFLGAMALMPMepFGLSINMLTLFAFILVLGIV 400
Cdd:NF033617 320 DRTRFIRASIDEVESTLLEAVALVILVVFLFLrNLRATLIPAVTVPLSLIGTFAVMYL--FGFSINLLTLMALVLAIGLV 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 401 VDDAIVIGESAHTEVERHGHSITNVIRGAKKVAMPATFGVLTTIAAFIPMLMVPGPMGIIWKSIGMIVILCLAFSLVESK 480
Cdd:NF033617 398 VDDAIVVVENIHRHIEEGESPLEAALKGAREIGFTVIAMTLTLVAVYLPILFMGGLTGRLFREFAVTLAGAVIISGIVAL 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 481 FILPAHLAHMkpSKPNPNPGPFGR-FKRAFNEKVQHfihhsYRNFMERMIPHRYTLVAGFIGVLILSVA---MVTSGkvr 556
Cdd:NF033617 478 TLTPMMCSRL--LKANEKPGRFARaVDRFFDGLTAR-----YGRGLKWVLKHRPLTLVVALATLALLPLlyvFIPKE--- 547
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 557 wvFFPDIPSDFIQVNLEMDEGSSelntldvVQKIENALYTMNQQMESEIGYPVVKHSFINMSSRTS--AFIFAELTKGED 634
Cdd:NF033617 548 --LAPSEDRGVIFGMIQAPQSIS-------LDYMSAKMRDVEKILSSDPEVQSLTSFNGVGGNPGDntGFGIINLKPWDE 618
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 635 RDVDGVTIAEAWRKQLPDL--VAVKKLNINASTNDAGGDISFRF---TSTDLEQLSAAAKELKQKLASYEGVYDIADNFS 709
Cdd:NF033617 619 RDVSAQEIIDRLRPKLAKVpgMDLFLFPLQDLPGGAGSSLPQYQvtlTPSDYDSLFTWAEKLKEKLRKSPQFADVDSDLQ 698
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 710 SGSHEIRLKI-RPEAEALGLTLSDLARQVRYGFYGYEAQRILRNKEEVKVMVRYPLEQRRTIGHLENMMIRTPNGMAVPF 788
Cdd:NF033617 699 DKGPELNVDIdRDKAARLGISMQDIGSTLEVAFGQRQVNTIYTDGNQYKVVLEVDRRYRLNPEALNQIYVRSNDGKLVPL 778
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 789 STVAELELGESYSSITRVDGRRAITVTANankdkVEPSKVVQEIQEKFMPELERKYP-HISASLDGASQDEQAAMVGLLQ 867
Cdd:NF033617 779 STLAKIEERAAPLSLNHFNQFNSATLSFN-----LAPGVSLGEAIEALDQAAKELLPsGISGSFQGAARAFQEEGSSLLF 853
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 868 GFFFAIFTIYALMAIPLKSYSQPLIIMSVIPFGMIGALFGHFILGLSMSILSLCGIVALAGVVVNDSLILVDFVNRA-RE 946
Cdd:NF033617 854 LFLLALAAIYLVLAIQYESFVDPLTILSTVPLAGCGALLALALGGQSMNIYAQIGLITLIGLVKKNGILMVEFANELqRH 933
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 765522869 947 QGQSVVKAAIDSGCYRFRAIILTSLTTFVGLVPIIMERSLQAQIVIPMATSLAFGILFSTLVTLILVPMLYIILD 1021
Cdd:NF033617 934 QGLSRREAIYQAAALRLRPILMTTLAMLLGAIPLMLSTGAGAESRFPLGIVIVGGLGVGTLFTLFVLPVVYLLLA 1008
|
|
| 2A0602 |
TIGR00915 |
The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Proteins ... |
10-1020 |
1.00e-91 |
|
The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate]
Pssm-ID: 273335 [Multi-domain] Cd Length: 1044 Bit Score: 316.29 E-value: 1.00e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 10 WFARNNVAANLLMWILLIGGIFSAFLINKEVFPSFELNYLRISVAYPGAAPQEIEEGITIKIEEAIQDISGIKKVTSVA- 88
Cdd:TIGR00915 4 FFIDRPIFAWVIAIIIMLAGTLSILSLPVSQYPSIAPPAITVSASYPGASAQTVQDTVTQVIEQNMNGIDGLRYMSSSSd 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 89 SEGVGSVTIEVEDGYDAkevlDEAKLRVD-----AIATFPANIEKPDIYRIKPENN----VIWVSVYGDMTLHDMKE-LA 158
Cdd:TIGR00915 84 SDGSMTITLTFEQGTDP----DIAQVQVQnklqlATPLLPQEVQRQGVRVEKASSNflmvIGLVSDDGSMTKEDLSDyAA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 159 KEIRDEITNLPAVTRAEVTGVRdYEIGIEVSEDKLREYGLTFTQVAQAVQNTSIDLPGGSI------RAQDGDILLRTKG 232
Cdd:TIGR00915 160 SNMVDPLSRLEGVGDVQLFGSQ-YAMRIWLDPAKLNSYQLTPADVISAISAQNAQISAGQLgglpavPGQQLNATIIAQT 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 233 QAYTGDDFANIVVSTRADGSRVMLPMVAEIKDDFEERLEYTRFDGMPAAIIEITSIDDQNALAIADQVKGFIAERQATLP 312
Cdd:TIGR00915 239 RLQTPEQFENILLKVNTDGSQVRLKDVARVELGGENYSISARFNGKPASGLAIKLATGANALDTAKAVKAELAVLEPFFP 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 313 SGAKLDYWGDLTHYLKGRLNMMLSNMFMGALLVFIILALFL-DLKLAFWVMLGLPVCFLGAMALMPMepFGLSINMLTLF 391
Cdd:TIGR00915 319 QGMKYVYPYDTTPFVEASIEEVVHTLIEAIVLVFLVMYLFLqNFRATLIPTIAVPVVLLGTFAVLAA--FGFSINTLTMF 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 392 AFILVLGIVVDDAIVIGESahteVERHGHSITNVIRGAKKVAMPATFGVLTTIAA-----FIPMLMVPGPMGIIWKSIGM 466
Cdd:TIGR00915 397 AMVLAIGLLVDDAIVVVEN----VERVMAEEGLPPKEATRKSMGQIQGALVGIAMvlsavFVPMAFFGGSTGAIYRQFSI 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 467 IVILCLAFSLVESKFILPAHLAHM-KPSKPNPNPGPFGRFKRAFNEKVQHFIHHsYRNFMERMIPHRYTLVAGFIGVLIL 545
Cdd:TIGR00915 473 TIVSAMALSVLVALILTPALCATMlKPIEKGEHHEKKGGFFGWFNRMFDSSTHG-YENGVGKILRRRGRYLLVYVLLVGG 551
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 546 SVAMVTsgKVRWVFFPDIPSDFIQVNLEMDEGSSELNTLDVVQKIENALYTmNQQMESEIGYPVVKHSFINmSSRTSAFI 625
Cdd:TIGR00915 552 MVFLFV--RLPTSFLPDEDQGVFMTIVQLPAGATAERTQAVLAQVTKYLLA-KEKANVESVFTVNGFSFAG-RGQNMGMA 627
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 626 FAELTKGEDRDVDGVT----IAEAWRK--QLPD--LVAVKKLNINASTNDAGGDISFRFTS-TDLEQLSAAAKELKQKLA 696
Cdd:TIGR00915 628 FIRLKDWEERTGKENSvfaiAGRATGHfmQIKDamVIAFVPPAILELGNATGFDFFLQDRAgLGHEALLQARNQLLGLAA 707
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 697 SYEGVYDIADNFSSGSHEIRLKI-RPEAEALGLTLSDLARQVRYGFYG-YEAQRILRNKEEvKVMVRYPLEQRRTIGHLE 774
Cdd:TIGR00915 708 QNPALTRVRPNGLEDEPQLKIDIdREKAQALGVSIADINTTLSTAWGSsYVNDFIDRGRVK-RVYVQAEEDARMSPEDIN 786
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 775 NMMIRTPNGMAVPFSTVAELELGESYSSITRVDGRRAITVTANANKDKvePSKVVQEIQEKFMPELErkyPHISASLDGA 854
Cdd:TIGR00915 787 KWYVRNASGEMVPFSAFATVRWEYGSPQLERYNGLPSMEILGSAAPGV--STGQAMAAMEAIAQKLP---PGFGFSWTGM 861
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 855 SQDEQAAMVGLLQGFFFAIFTIYALMAIPLKSYSQPLIIMSVIPFGMIGALFGHFILGLSMSILSLCGIVALAGVVVNDS 934
Cdd:TIGR00915 862 SYEERLSGSQAPALYALSLLVVFLCLAALYESWSIPVSVMLVVPLGIIGALLATTLRGLSNDVYFQVGLLTTIGLSAKNA 941
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 935 LILVDFVNRAREQGQSVVKAAIDSGCYRFRAIILTSLTTFVGLVPIIMERSLQAQIVIPMATSLAFGILFSTLVTLILVP 1014
Cdd:TIGR00915 942 ILIVEFAKELMAQGKSIVEAALEAARLRLRPILMTSLAFILGVVPLAISTGAGSGSQHAIGTGVFGGMVTATVLAIFFVP 1021
|
....*.
gi 765522869 1015 MLYIIL 1020
Cdd:TIGR00915 1022 LFYVVV 1027
|
|
| 2A0601 |
TIGR00914 |
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation ... |
7-1028 |
5.05e-75 |
|
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation antiporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 129992 [Multi-domain] Cd Length: 1051 Bit Score: 268.55 E-value: 5.05e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 7 IIAWFARNNVAANLLMWILLIG----GIFSAFLINKEVFPSFELNYLRISVAYPGAAPQEIEEGITIKIEEAIQDISGIK 82
Cdd:TIGR00914 1 MIERIISFSVAQRWLVLLATLVmailGIWSYNRLPIDAVPDITNVQVQINTSAPGYSPLEVEQRVTYPIETAMAGLPGLE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 83 KVTSVASEGVGSVTIEVEDGYD-------AKEVLDEAKlrvdaiATFPANIEK---PD--------IYRIKPENNVIwVS 144
Cdd:TIGR00914 81 TTRSLSRYGLSQVTVIFKDGTDlyfarqlVNERLQQAR------DNLPEGVSPemgPIstglgeifLYTVEAEEGAR-KK 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 145 VYGDMTLHDMKELAKE-IRDEITNLPAVtrAEVTGVRDY--EIGIEVSEDKLREYGLTFTQVAQAVQNTSIDLPGGSIRA 221
Cdd:TIGR00914 154 DGGAYTLTDLRTIQDWiIRPQLRTVPGV--AEVNSIGGYvkQFLVAPDPEKLAAYGLSLADVVNALERNNQNVGAGYIER 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 222 QDGDILLRTKGQAYTGDDFANIVVSTRaDGSRVMLPMVAEIKDDFEERLEYTRFDGMPAAIIEITSIDDQNALAIADQVK 301
Cdd:TIGR00914 232 RGEQYLVRAPGQVQSMDDIRNIVIATG-EGVPIRIRDVARVQIGKELRTGAATENGKEVVLGTVFMLIGENSRTVAQAVG 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 302 GFIAERQATLPSGAKLDYWGDLTHYLKGRLNMMLSNMFMGALLVFIILALFL-DLKLAFWVMLGLPVCFLgaMALMPMEP 380
Cdd:TIGR00914 311 DKLETINKTLPEGVEIVTTYDRSQLVDAAIATVKKNLLEGALLVIVILFLFLgNIRAALIAATVIPLSLL--ITFIGMVF 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 381 FGLSINMLTLFAfiLVLGIVVDDAIVIGESAHTEVE----RHGHSITNVIR------GAKKVAMPATFGVLTTIAAFIPM 450
Cdd:TIGR00914 389 QGISANLMSLGA--LDFGLIVDGAVVIVENAHRRLAeaqhHHGRQLTLKERlhevfaASREVRRPLIFGQLIITLVFLPI 466
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 451 LMVPGPMGIIWKSIGMIVILCLAFSLVESKFILPAHLAHM----KPSKPNPnpgpfgrfkrafnekVQHFIHHSYRNFME 526
Cdd:TIGR00914 467 FTLTGVEGKMFHPMAFTVVLALAGAMILSLTFVPAAVALFirgkVAEKENR---------------LMRVLKRRYEPLLE 531
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 527 RMIPHRYTLVAGFIGVLILSVAMVTsgKVRWVFFPDIPSDFIQVNLEMDEGSSELNTLDVVQKIENALYTMNQ------- 599
Cdd:TIGR00914 532 RVLAWPAVVLGAAAVSIVLVVWIAS--RVGGEFIPSLNEGDLAYQALRIPGTSLAQSVAMQQTLEKLIKSFPEvarvfak 609
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 600 ----QMESEIGYPVVKHSFINMSSRTsafifaELTKGEDRDVDGVTIAEAWRKQLP----DLVAVKKLNINASTNDAGGD 671
Cdd:TIGR00914 610 tgtaEIATDPMPPNASDTYIILKPES------QWPEGKKTKEDLIEEIQEATVRIPgnnyEFTQPIQMRFNELISGVRSD 683
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 672 ISFRFTSTDLEQLSAAAKELKQKLASYEGVYDIADNFSSGSHEIRLKI-RPEAEALGLTLSDLARQVRYGFYGYEAQRIL 750
Cdd:TIGR00914 684 VAVKVFGDDLDDLDATAEKISAVLKGVPGAADVKVEQTTGLPYLTVEIdREKAARYGLTVGDVQDTVATAVGGRMSGETF 763
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 751 RNKEEVKVMVRYPLEQRRTIGHLENMMIRTPNGMA-----VPFSTVAELELGESYSSITRVDGRRAITVTANA-NKDKVE 824
Cdd:TIGR00914 764 EGDRRFDIVIRLPESLRESPQALRQLPIPLPLSEDarkqfIPLSDVADLRVSPGPNQISRENGKRRVVVSANVrGRDLGS 843
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 825 pskVVQEIQEKFMPELERKyPHISASLDGASQDEQAAMVGLLQGFFFAIFTIYALMAIPLKSYSQPLIIMSVIPFGMIGA 904
Cdd:TIGR00914 844 ---FVDDAKKAIAEQVKLP-PGYWITWGGQFEQLQSATKRLQIVVPVTLLLIFVLLYAAFGNVKDALLVFTGIPFALTGG 919
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 905 LFGHFILGLSMSILSLCGIVALAGVVVNDSLILVDFVNRAREQGQSVVKAAIDSGCYRFRAIILTSLTTFVGLVPIIMER 984
Cdd:TIGR00914 920 VFALWLRGIPLSISAAVGFIALSGVAVLNGLVMISFIRKLLEEGPSLDEAVYEGALTRVRPVLMTALVASLGFVPMAIAT 999
|
1050 1060 1070 1080
....*....|....*....|....*....|....*....|....
gi 765522869 985 SLQAQIVIPMATSLAFGILFSTLVTLILVPMLYIILDDLSHKSR 1028
Cdd:TIGR00914 1000 GTGAEVQRPLATVVIGGIITATLLTLFVLPALYRLVHRRRHKGR 1043
|
|
| PRK15127 |
PRK15127 |
multidrug efflux RND transporter permease subunit AcrB; |
24-1032 |
1.48e-67 |
|
multidrug efflux RND transporter permease subunit AcrB;
Pssm-ID: 185081 [Multi-domain] Cd Length: 1049 Bit Score: 246.74 E-value: 1.48e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 24 ILLIGGIFSAFLINKEVFPSFELNYLRISVAYPGAAPQEIEEGITIKIEEAIQDISGIKKVTSVA-SEGVGSVTIEVEDG 102
Cdd:PRK15127 18 IIMLAGGLAILKLPVAQYPTIAPPAVTISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSdSTGTVQITLTFESG 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 103 YDAK--EVLDEAKLRVdAIATFPANIEKPDIYRIKPENNVIWV----SVYGDMTLHDMKE-LAKEIRDEITNLPAVTRAE 175
Cdd:PRK15127 98 TDADiaQVQVQNKLQL-AMPLLPQEVQQQGVSVEKSSSSFLMVvgviNTDGTMTQEDISDyVAANMKDPISRTSGVGDVQ 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 176 VTGVRdYEIGIEVSEDKLREYGLTFTQVAQAV--QNTSIDLP--GGS--IRAQDGDILLRTKGQAYTGDDFANIVVSTRA 249
Cdd:PRK15127 177 LFGSQ-YAMRIWMNPNELNKFQLTPVDVINAIkaQNAQVAAGqlGGTppVKGQQLNASIIAQTRLTSTEEFGKILLKVNQ 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 250 DGSRVMLPMVAEIKDDFEERLEYTRFDGMPAAIIEITSIDDQNALAIADQVKGFIAERQATLPSGAKLDYWGDLTHYLKG 329
Cdd:PRK15127 256 DGSRVRLRDVAKIELGGENYDIIAEFNGQPASGLGIKLATGANALDTAAAIRAELAKMEPFFPSGLKIVYPYDTTPFVKI 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 330 RLNMMLSNMFMGALLVFIILALFL-DLKLAFWVMLGLPVCFLGAMALmpMEPFGLSINMLTLFAFILVLGIVVDDAIVIG 408
Cdd:PRK15127 336 SIHEVVKTLVEAIILVFLVMYLFLqNFRATLIPTIAVPVVLLGTFAV--LAAFGFSINTLTMFGMVLAIGLLVDDAIVVV 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 409 ESAHTEVERHGHSITNVIRGAKKVAMPATFGVLTTIAA-FIPMLMVPGPMGIIWKSIGMIVILCLAFSLVESKFILPAHL 487
Cdd:PRK15127 414 ENVERVMAEEGLPPKEATRKSMGQIQGALVGIAMVLSAvFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVALILTPALC 493
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 488 AHM-KPSKPN----PNPGPFGRFKRAFNEKVQHFIhHSYRNFMERMipHRYTLVAGFI--GVLILSVAMVTSgkvrwvFF 560
Cdd:PRK15127 494 ATMlKPIAKGdhgeGKKGFFGWFNRMFEKSTHHYT-DSVGNILRST--GRYLVLYLIIvvGMAYLFVRLPSS------FL 564
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 561 PDIPSDFIQVNLEMDEGSSELNTLDVVQKIENalYTMNQQMESEIGYPVVKHSFINMSSRTSAFIFAELT-----KGEDR 635
Cdd:PRK15127 565 PDEDQGVFLTMVQLPAGATQERTQKVLNEVTD--YYLTKEKNNVESVFAVNGFGFAGRGQNTGIAFVSLKdwadrPGEEN 642
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 636 DVDGVTI-AEAWRKQLPDLVaVKKLNINASTnDAGGDISFRFTSTDL-----EQLSAAAKELKQKLASYEGVY-DIADNF 708
Cdd:PRK15127 643 KVEAITMrATRAFSQIKDAM-VFAFNLPAIV-ELGTATGFDFELIDQaglghEKLTQARNQLLGEAAKHPDMLvGVRPNG 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 709 SSGSHEIRLKIRPE-AEALGLTLSDLARQVRYGFYGYEAQRILRNKEEVKVMVRYPLEQRRTIGHLENMMIRTPNGMAVP 787
Cdd:PRK15127 721 LEDTPQFKIDIDQEkAQALGVSISDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYRMLPDDIGDWYVRAADGQMVP 800
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 788 FSTVAELELGESYSSITRVDGRRAITVTANAnkdkvEPSKVVQEIQEkFMPELERKYPH-ISASLDGASQDEQAAMVGLL 866
Cdd:PRK15127 801 FSAFSSSRWEYGSPRLERYNGLPSMEILGQA-----APGKSTGEAME-LMEELASKLPTgVGYDWTGMSYQERLSGNQAP 874
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 867 QGFFFAIFTIYALMAIPLKSYSQPLIIMSVIPFGMIGALFGHFILGLSMSILSLCGIVALAGVVVNDSLILVDFVNRARE 946
Cdd:PRK15127 875 ALYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMD 954
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 947 -QGQSVVKAAIDSGCYRFRAIILTSLTTFVGLVPIIMERSLQAQIVIPMATSLAFGILFSTLVTLILVPMLYIIL----- 1020
Cdd:PRK15127 955 kEGKGLIEATLEAVRMRLRPILMTSLAFILGVMPLVISSGAGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVVrrrfs 1034
|
1050
....*....|....*
gi 765522869 1021 ---DDLSHKSRALYH 1032
Cdd:PRK15127 1035 rknEDIEHSHTVDHH 1049
|
|
| PRK10555 |
PRK10555 |
multidrug efflux RND transporter permease AcrD; |
7-1020 |
1.76e-64 |
|
multidrug efflux RND transporter permease AcrD;
Pssm-ID: 182544 [Multi-domain] Cd Length: 1037 Bit Score: 237.04 E-value: 1.76e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 7 IIAWfarnnvaanLLMWILLIGGIFSAFLINKEVFPSFELNYLRISVAYPGAAPQEIEEGITIKIEEAIQDISGIKKVTS 86
Cdd:PRK10555 10 IFAW---------VLAILLCLTGTLAIFSLPVEQYPDLAPPNVRITANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 87 VASE-GVGSVTIEVEDGYDAkevlDEAKLRVD-----AIATFPANIEKPDIYRIKPENN----VIWVSVYGDMTLHDMKE 156
Cdd:PRK10555 81 QSSGtGQASVTLSFKAGTDP----DEAVQQVQnqlqsAMRKLPQAVQNQGVTVRKTGDTniltIAFVSTDGSMDKQDIAD 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 157 -LAKEIRDEITNLPAVTRAEVTGVRdYEIGIEVSEDKLREYGLTFTQVAQAV--QNTSIDLP--GG--SIRAQDGDILLR 229
Cdd:PRK10555 157 yVASNIQDPLSRVNGVGDIDAYGSQ-YSMRIWLDPAKLNSFQMTTKDVTDAIesQNAQIAVGqlGGtpSVDKQALNATIN 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 230 TKGQAYTGDDFANIVVSTRADGSRVMLPMVAEIKDDFEERLEYTRFDGMPAAIIEITSIDDQNALAIADQVKGFIAERQA 309
Cdd:PRK10555 236 AQSLLQTPEQFRDITLRVNQDGSEVTLGDVATVELGAEKYDYLSRFNGKPASGLGVKLASGANEMATAKLVLNRLDELAQ 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 310 TLPSGAKLDYWGDLTHYLKGRLNMMLSNMFMGALLVFIILALFL-DLKLAFWVMLGLPVCFLGAMALmpMEPFGLSINML 388
Cdd:PRK10555 316 YFPHGLEYKVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLqNFRATLIPTIAVPVVLMGTFSV--LYAFGYSINTL 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 389 TLFAFILVLGIVVDDAIVIGESAHTEVERHGHSitnvIRGAKKVAMPATFGVLTTI-----AAFIPMLMVPGPMGIIWKS 463
Cdd:PRK10555 394 TMFAMVLAIGLLVDDAIVVVENVERIMSEEGLT----PREATRKSMGQIQGALVGIamvlsAVFVPMAFFGGTTGAIYRQ 469
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 464 IGMIVILCLAFSLVESKFILPAHLAHM-KPSKPNPNPGP---FGRFKRAFNEKVqhfihHSYRNFMERMIPH--RYTLV- 536
Cdd:PRK10555 470 FSITIVSAMVLSVLVAMILTPALCATLlKPLKKGEHHGQkgfFGWFNRMFNRNA-----ERYEKGVAKILHRslRWILIy 544
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 537 AGFIGVL-ILSVAMVTSgkvrwvFFPDIPSDFIQVNLEMDEGSSELNTLDVVQKIENALYTMNQQMeseigypvVKHSFI 615
Cdd:PRK10555 545 VLLLGGMvFLFLRLPTS------FLPLEDRGMFTTSVQLPSGSTQQQTLKVVEKVEKYYFTHEKDN--------VMSVFA 610
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 616 NMSS------RTSAFIFAELTKGEDRD-VDGVTIA------EAWRK-QLPDLVAVKKLNINASTNDAGGDISFR-FTSTD 680
Cdd:PRK10555 611 TVGSgpggngQNVARMFIRLKDWDERDsKTGTSFAiieratKAFNKiKEARVIASSPPAISGLGSSAGFDMELQdHAGAG 690
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 681 LEQLSAAAKELKQKLASYEGVYDIADNFSSGSHEIRLKI-RPEAEALGLTLSDLARQVRYGFYGYEAQRILRNKEEVKVM 759
Cdd:PRK10555 691 HDALMAARNQLLALAAKNPELTRVRHNGLDDSPQLQIDIdQRKAQALGVSIDDINDTLQTAWGSSYVNDFMDRGRVKKVY 770
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 760 VRYPLEQRRTIGHLENMMIRTPNGMAVPFSTVA---------ELELGESYSSITRVdGRRAITVTANANKDKVEpsKVVQ 830
Cdd:PRK10555 771 VQAAAPYRMLPDDINLWYVRNKDGGMVPFSAFAtsrwetgspRLERYNGYSAVEIV-GEAAPGVSTGTAMDIME--SLVK 847
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 831 EIQEKFmpELERKYPHISASLDGAsqdeQAAMVgllqgFFFAIFTIYALMAIPLKSYSQPLIIMSVIPFGMIGALFGHFI 910
Cdd:PRK10555 848 QLPNGF--GLEWTAMSYQERLSGA----QAPAL-----YAISLLVVFLCLAALYESWSVPFSVMLVVPLGVIGALLATWM 916
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 911 LGLSMSILSLCGIVALAGVVVNDSLILVDFVNRAREQGQSVVKAAIDSGCYRFRAIILTSLTTFVGLVPIIMERSLQAQI 990
Cdd:PRK10555 917 RGLENDVYFQVGLLTVIGLSAKNAILIVEFANEMNQKGHDLFEATLHASRQRLRPILMTSLAFIFGVLPMATSTGAGSGS 996
|
1050 1060 1070
....*....|....*....|....*....|
gi 765522869 991 VIPMATSLAFGILFSTLVTLILVPMLYIIL 1020
Cdd:PRK10555 997 QHAVGTGVMGGMISATILAIFFVPLFFVLV 1026
|
|
| PRK09577 |
PRK09577 |
multidrug efflux RND transporter permease subunit; |
10-1020 |
3.02e-62 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 169981 [Multi-domain] Cd Length: 1032 Bit Score: 230.51 E-value: 3.02e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 10 WFARNNVAANLLMWILLIGGIFSAFLINKEVFPSFELNYLRISVAYPGAAPQEIEEGITIKIEEAIQDISGIKKVTSVAS 89
Cdd:PRK09577 4 FFIDRPVFAWVISLFIMLGGIFAIRALPVAQYPDIAPPVVSIYATYPGASAQVVEESVTALIEREMNGAPGLLYTSATSS 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 90 EGVGSVTIEVEDGYDAKEVLDEAKLRVDAI-ATFPANIEKPDIYRIKPENNV-IWVSVYGD---MTLHDMKELAK-EIRD 163
Cdd:PRK09577 84 AGQASLSLTFKQGVNADLAAVEVQNRLKTVeARLPEPVRRDGIQVEKAADNIqLIVSLTSDdgrLTGVELGEYASaNVLQ 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 164 EITNLPAVTRAEVTGVrDYEIGIEVSEDKLREYGLTFTQVAQAVQNTSIDLPGGSIRA----QDGDILLRTKGQA--YTG 237
Cdd:PRK09577 164 ALRRVEGVGKVQFWGA-EYAMRIWPDPVKLAALGLTASDIASAVRAHNARVTIGDIGRsavpDSAPIAATVFADAplKTP 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 238 DDFANIVVSTRADGSRVMLPMVAEIKDDFEERLEYTRFDGMPAAIIEITSIDDQNALAIADQVKGFIAERQATLPSGAKL 317
Cdd:PRK09577 243 EDFGAIALRARADGSALYLRDVARIEFGGNDYNYPSYVNGKTATGMGIKLAPGSNAVATEKRVRATMDELSRYFPPGVKY 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 318 DYWGDLTHYLKGRLNMMLSNMFMGALLVFIILALFL-DLKLAFWVMLGLPVCFLGAMALMpmEPFGLSINMLTLFAFILV 396
Cdd:PRK09577 323 QIPYETSSFVRVSMNKVVTTLIEAGVLVFLVMFLFMqNFRATLIPTLVVPVALLGTFGVM--LAAGFSINVLTMFGMVLA 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 397 LGIVVDDAIVIGESAHTEVERHGHSITNVIRGAKKVAMPATFG---VLTTIaaFIPMLMVPGPMGIIWKSIGMIVILCLA 473
Cdd:PRK09577 401 IGILVDDAIVVVENVERLMVEEGLSPYDATVKAMKQISGAIVGitvVLTSV--FVPMAFFGGAVGNIYRQFALSLAVSIG 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 474 FSLVESKFILPAHLAH-MKP--SKPNPNPGPFGRFKRAFNEKVQHfihhsYRNFMERMI--PHRYTLVAGfigvLILSVA 548
Cdd:PRK09577 479 FSAFLALSLTPALCATlLKPvdGDHHEKRGFFGWFNRFVARSTQR-----YATRVGAILkrPLRWLVVYG----ALTAAA 549
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 549 MVTSGKVRWVFFPDIPSDFIQVNLEMDEGSSELNTLDVVQKIENALytmNQQMESEIGYPVVKHSFINMSSrTSAFIFAE 628
Cdd:PRK09577 550 ALLFTRLPTAFLPDEDQGNFMVMVIRPQGTPLAETMQSVREVESYL---RRHEPVAYTFALGGFNLYGEGP-NGGMIFVT 625
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 629 LTKGEDRdvdgvtiaEAWRKQLPDLVAVKKLNINASTN------------DAGGDISFRFT-----STDLEQLSAAAKEL 691
Cdd:PRK09577 626 LKDWKER--------KAARDHVQAIVARINERFAGTPNttvfamnspalpDLGSTSGFDFRlqdrgGLGYAAFVAAREQL 697
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 692 KQKLASYEGVYDIADNFSSGSHEIRLKI-RPEAEALGLTLSDLARQVRYGFYGYEAQRILRNKEEVKVMVRYPLEQRRTI 770
Cdd:PRK09577 698 LAEGAKDPALTDLMFAGTQDAPQLKLDIdRAKASALGVSMDEINTTLAVMFGSDYIGDFMHGSQVRRVIVQADGRHRLDP 777
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 771 GHLENMMIRTPNGMAVPFSTVAELELGESYSSITRVDGRRAITVTANANKDKvEPSKVVQEIQekfmpELERKYPH-ISA 849
Cdd:PRK09577 778 DDVKKLRVRNAQGEMVPLAAFATLHWTLGPPQLTRYNGYPSFTINGSAAPGH-SSGEAMAAIE-----RIAATLPAgIGY 851
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 850 SLDGASQDE-----QAAMVgllqgFFFAIFTIYALMAIPLKSYSQPLIIMSVIPFGMIGALFGHFILGLSMSILSLCGIV 924
Cdd:PRK09577 852 AWSGQSFEErlsgaQAPML-----FALSVLVVFLALAALYESWSIPFAVMLVVPLGVIGAVLGVTLRGMPNDIYFKVGLI 926
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 925 ALAGVVVNDSLILVDFVNRAREQGQSVVKAAIDSGCYRFRAIILTSLTTFVGLVPIIMERSLQAQIVIPMATSLAFGILF 1004
Cdd:PRK09577 927 ATIGLSAKNAILIVEVAKDLVAQRMSLADAALEAARLRLRPIVMTSLAFGVGVLPLAFASGAASGAQIAIGTGVLGGVIT 1006
|
1050
....*....|....*.
gi 765522869 1005 STLVTLILVPMLYIIL 1020
Cdd:PRK09577 1007 ATVLAVFLVPLFFVVV 1022
|
|
| PRK09579 |
PRK09579 |
multidrug efflux RND transporter permease subunit; |
11-1020 |
4.39e-60 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 169983 [Multi-domain] Cd Length: 1017 Bit Score: 223.56 E-value: 4.39e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 11 FARNNVAANLL-MWILLIG-GIFSAFLINKevFPSFELNYLRISVAYPGAAPQEIEEGITIKIEEAIQDISGIKKVTSVA 88
Cdd:PRK09579 7 FIRRPVLASVVsLLIVLLGfQAWSKLQIRQ--YPQMENALITVTTAYPGANAETIQGYITQPLQQSLASAEGIDYMTSVS 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 89 SEGVGSVTIEVEDGYDAKEVLDEAKLRVDAIAT-FPANIEKPDIYRIKPENN-VIWVSVYGD-MTLHDMKE-LAKEIRDE 164
Cdd:PRK09579 85 RQNFSIISIYARIGADSDRLFTELLAKANEVKNqLPQDAEDPVLSKEAADASaLMYISFYSEeMSNPQITDyLSRVIQPK 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 165 ITNLPAVTRAEVTGVRDYEIGIEVSEDKLREYGLTFTQVAQAVQNTSIDLPGGSIRAQDGDILLRTKGQAYTGDDFANIV 244
Cdd:PRK09579 165 LATLPGMAEAEILGNQVFAMRLWLDPVKLAGFGLSAGDVTQAVRRYNFLSAAGEVKGEYVVTSINASTELKSAEAFAAIP 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 245 VSTRADgSRVMLPMVAEIKDDFEERLEYTRFDGMPAAIIEITSIDDQNALAIADQVKGFIAERQATLPSGAKLDYWGDLT 324
Cdd:PRK09579 245 VKTSGD-SRVLLGDVARVEMGAENYDSISSFDGIPSVYIGIKATPSANPLDVIKEVRAIMPELESQLPPNLKVSIAYDAT 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 325 HYLKGRLNMMLSNMFMGALLVFIILALFL-DLKLAFWVMLGLPVCFLGAMALMPMepFGLSINMLTLFAFILVLGIVVDD 403
Cdd:PRK09579 324 LFIQASIDEVVKTLGEAVLIVIVVVFLFLgALRSVLIPVVTIPLSMIGVLFFMQM--MGYSINLLTLLAMVLAIGLVVDD 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 404 AIVIGESAHTEVERHGHSITNVIRGAKKVAMPATFGVLTTIAAFIPMLMVPGPMGIIWKSIGMIVILCLAFSLVESKFIL 483
Cdd:PRK09579 402 AIVVVENIHRHIEEGKSPFDAALEGAREIAMPVVSMTITLAAVYAPIGFLTGLTGALFKEFALTLAGAVIISGIVALTLS 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 484 PAHLAHMKPSKPNPNpGPFGRFKRAFNEkvqhfIHHSYRNFMERMIPHRYTLVAGFIGVLILSVAMVTsgkvrwvffpdi 563
Cdd:PRK09579 482 PMMCALLLRHEENPS-GLAHRLDRLFER-----LKQRYQRALHGTLNTRPVVLVFAVIVLALIPVLLK------------ 543
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 564 psdFIQVNLEMDEGSSELNTLDVVQKIENALYtMNQQMESEIG----YPVVKHSF-INMSSRTSAFIFAELTKG-EDRDV 637
Cdd:PRK09579 544 ---FTQSELAPEEDQGIIFMMSSSPQPANLDY-LNAYTDEFTPifksFPEYYSSFqINGFNGVQSGIGGFLLKPwNERER 619
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 638 DGVTIAEAWRKQLPDLVAVKKLNINASTNDAGGD-ISFRF---TSTDLEQLSAAAKELKQKlASYEGVYDIAD-NFSSGS 712
Cdd:PRK09579 620 TQMELLPLVQAKLEEIPGLQIFGFNLPSLPGTGEgLPFQFvinTANDYESLLQVAQRVKQR-AQESGKFAFLDiDLAFDK 698
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 713 HEIRLKI-RPEAEALGLTLSDLARQVRYGFYGYEAQRILRNKEEVKVMVRYPLEQRRTIGHLENMMIRTPNGMAVPFSTV 791
Cdd:PRK09579 699 PEVVVDIdRAKAAQMGVSMQDLGGTLATLLGEGEINRFTIDGRSYKVIAQVERPYRDNPGWLNNYYVKNEQGQLLPLSTL 778
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 792 AELELGESYSSITRVDGRRAITVTANANKDKVEPSKVVQEIQEKFMPelerkyPHISASLDGASQDEQAAMVGLLQGFFF 871
Cdd:PRK09579 779 ITLSDRARPRQLNQFQQLNSAIISGFPIVSMGEAIETVQQIAREEAP------EGFAFDYAGASRQYVQEGSALWVTFGL 852
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 872 AIFTIYALMAIPLKSYSQPLIIMSVIPFGMIGALFGHFILGLSMSILSLCGIVALAGVVVNDSLILVDFVNRAR-EQGQS 950
Cdd:PRK09579 853 ALAIIFLVLAAQFESFRDPLVILVTVPLSICGALIPLFLGVSSMNIYTQVGLVTLIGLISKHGILIVEFANQLRhEQGLS 932
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 951 VVKAAIDSGCYRFRAIILTSLTTFVGLVPIIMERSLQAQIVIPMATSLAFGILFSTLVTLILVPMLYIIL 1020
Cdd:PRK09579 933 RREAIEEAAAIRLRPVLMTTAAMVFGMVPLILATGAGAVSRFDIGLVIATGMSIGTLFTLFVLPCIYTLL 1002
|
|
| PRK10614 |
PRK10614 |
multidrug efflux system subunit MdtC; Provisional |
9-1028 |
2.61e-55 |
|
multidrug efflux system subunit MdtC; Provisional
Pssm-ID: 182589 [Multi-domain] Cd Length: 1025 Bit Score: 209.20 E-value: 2.61e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 9 AWFARNNVAANLLMWILLIGGIFSAFLINKEVFPSFELNYLRISVAYPGAAPQEIEEGITIKIEEAIQDISGIKKVTSVA 88
Cdd:PRK10614 5 ALFIYRPVATILLSLAITLCGILGFRLLPVAPLPQVDFPVIMVSASLPGASPETMASSVATPLERSLGRIAGVNEMTSSS 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 89 SEGVGSVTIEVEDGYD----AKEVldEAKLRVdAIATFPANI-EKPDIYRIKPENNVIWVsvygdMTLHDMKELAKEIRD 163
Cdd:PRK10614 85 SLGSTRIILQFDFDRDingaARDV--QAAINA-AQSLLPSGMpSRPTYRKANPSDAPIMI-----LTLTSDTYSQGQLYD 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 164 EITNLPAVTRAEVTGVRDYEIG--------IEVSEDKLREYGLTFTQVAQAVQNTSIDLPGGSIRAQDGDILLRTKGQAY 235
Cdd:PRK10614 157 FASTQLAQTISQIDGVGDVDVGgsslpavrVGLNPQALFNQGVSLDDVRQAISNANVRRPQGAVEDGTHRWQIQTNDELK 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 236 TGDDFANIVVSTRaDGSRVMLPMVAEIKDDFEERLEYTRFDGMPAAIIEITSIDDQNALAIADQVKGFIAERQATLPSGA 315
Cdd:PRK10614 237 TAAEYQPLIIHYN-NGAAVRLGDVATVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDRIRAKLPELRETIPAAI 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 316 KLDYWGDLTHYLKGRLNMMLSNMFMGALLVFIILALFLDLKLAFWV-MLGLPVCFLGAMALMPMepFGLSINMLTLFAFI 394
Cdd:PRK10614 316 DLQIAQDRSPTIRASLEEVEQTLAISVALVILVVFLFLRSGRATLIpAVAVPVSLIGTFAAMYL--CGFSLNNLSLMALT 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 395 LVLGIVVDDAIVIGESAHTEVERHGHSITNVIRGAKKVAMPATFGVLTTIAAFIPMLMVPGPMGIIWKSIGMIVILCLAF 474
Cdd:PRK10614 394 IATGFVVDDAIVVLENISRHLEAGMKPLQAALQGVREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLFREFAVTLSVAIGI 473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 475 SLVESKFILPAHLAHM-KPSKPNPNPGpfgrfKRAFNeKVQHFIHHSYRNFMERMIPH-RYTLVAgFIGVLILSVAMVTS 552
Cdd:PRK10614 474 SLLVSLTLTPMMCAWLlKSSKPREQKR-----LRGFG-RMLVALQQGYGRSLKWVLNHtRWVGVV-LLGTIALNVWLYIS 546
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 553 gkVRWVFFPDIPSDFIQVNLEMDEGSSELNTLDVVQ---KIENAlytmNQQMESEIGypvvkhsFINMSSRTSAFIFAEL 629
Cdd:PRK10614 547 --IPKTFFPEQDTGRLMGFIQADQSISFQAMRGKLQdfmKIIRD----DPAVDNVTG-------FTGGSRVNSGMMFITL 613
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 630 TKGEDRDVDGVTIAEAWRKQLPD-------LVAVKKLNINASTNDAggdiSFRFT--STDLEQLSAAAKELKQKLASYEG 700
Cdd:PRK10614 614 KPLSERSETAQQVIDRLRVKLAKepganlfLMAVQDIRVGGRQSNA----SYQYTllSDDLAALREWEPKIRKALAALPE 689
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 701 VYDIADNFSSGSHEIRLKI-RPEAEALGLTLSDLARQVRYGFYGYEAQRILRNKEEVKVMVRYPLEQRRTIGHLENMMIR 779
Cdd:PRK10614 690 LADVNSDQQDKGAEMALTYdRDTMARLGIDVQAANSLLNNAFGQRQISTIYQPLNQYKVVMEVDPRYTQDISALEKMFVI 769
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 780 TPNGMAVPFSTVAELELGESYSSITRVDGRRAITVTANAnKDKVEPSKVVQEIqEKFMPELeRKYPHISASLDGASQDEQ 859
Cdd:PRK10614 770 NNEGKAIPLSYFAKWQPANAPLSVNHQGLSAASTISFNL-PTGKSLSDASAAI-ERAMTQL-GVPSTVRGSFAGTAQVFQ 846
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 860 AAMVGLLQGFFFAIFTIYALMAIPLKSYSQPLIIMSVIPFGMIGALFGHFILGLSMSILSLCGIVALAGVVVNDSLILVD 939
Cdd:PRK10614 847 ETMNSQLILILAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVD 926
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 940 FVNRAREQGQSVVKAAIDSGC-YRFRAIILTSLTTFVGLVPIIMERSLQAQIVIPMATSLAFGILFSTLVTLILVPMLYI 1018
Cdd:PRK10614 927 FALEAQRNGNLTAQEAIFQAClLRFRPIMMTTLAALFGALPLVLSGGDGAELRQPLGITIVGGLVMSQLLTLYTTPVVYL 1006
|
1050
....*....|
gi 765522869 1019 ILDDLSHKSR 1028
Cdd:PRK10614 1007 FFDRLRLRFS 1016
|
|
| PRK10503 |
PRK10503 |
MdtB/MuxB family multidrug efflux RND transporter permease subunit; |
16-1028 |
1.68e-51 |
|
MdtB/MuxB family multidrug efflux RND transporter permease subunit;
Pssm-ID: 182501 [Multi-domain] Cd Length: 1040 Bit Score: 197.26 E-value: 1.68e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 16 VAANLLMWILLIGGIFSAFLINKEVFPsfELNYLRISVA--YPGAAPQEIEEGITIKIEEAIQDISGIKKVTSVASEGVG 93
Cdd:PRK10503 21 VATTLLMVAILLAGIIGYRALPVSALP--EVDYPTIQVVtlYPGASPDVMTSAVTAPLERQFGQMSGLKQMSSQSSGGAS 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 94 SVTIEvedgYDAKEVLDEAKLRVDAI---AT--FPANIEKPDIY-RIKPENNVIW----VSVYGDMT-LHDMKElaKEIR 162
Cdd:PRK10503 99 VITLQ----FQLTLPLDVAEQEVQAAinaATnlLPSDLPNPPVYsKVNPADPPIMtlavTSTAMPMTqVEDMVE--TRVA 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 163 DEITNLPAVTRAEVTGVRDYEIGIEVSEDKLREYGLTFTQVAQAVQNTSIDLPGGSIRAQDGDILLRTKGQAYTGDDFAN 242
Cdd:PRK10503 173 QKISQVSGVGLVTLSGGQRPAVRVKLNAQAIAALGLTSETVRTAITGANVNSAKGSLDGPTRAVTLSANDQMQSAEEYRQ 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 243 IVVSTRaDGSRVMLPMVAEIKDDFEERLEYTRFDGMPAAIIEITSIDDQNALAIADQVKGFIAERQATLPSGAKLDYWGD 322
Cdd:PRK10503 253 LIIAYQ-NGAPIRLGDVATVEQGAENSWLGAWANKQQAIVMNVQRQPGANIIATADSIRQMLPQLTESLPKSVKVTVLSD 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 323 LTHYLKGRLNMMLSNMFMGALLVFIILALFLDLKLAFWV-MLGLPVCFLGAMALMPMepFGLSINMLTLFAFILVLGIVV 401
Cdd:PRK10503 332 RTTNIRASVDDTQFELMLAIALVVMIIYLFLRNIPATIIpGVAVPLSLIGTFAVMVF--LDFSINNLTLMALTIATGFVV 409
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 402 DDAIVIGESAHTEVERHGHSITNVIRGAKKVAMPATFGVLTTIAAFIPMLMVPGPMGIIWKSIGMIVILCLAFSLVESKF 481
Cdd:PRK10503 410 DDAIVVIENISRYIEKGEKPLAAALKGAGEIGFTIISLTFSLIAVLIPLLFMGDIVGRLFREFAVTLAVAILISAVVSLT 489
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 482 ILPAHLAHMKPS----KPNpnpgpfgRFKRAfNEKVQHFIHHSYRNFMERMIPHRYTLVAGFIGVLILSVAMvtsgkvrW 557
Cdd:PRK10503 490 LTPMMCARMLSQeslrKQN-------RFSRA-SERMFDRVIAAYGRGLAKVLNHPWLTLSVALSTLLLTVLL-------W 554
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 558 V-----FFPDIPSDFIQVNLEMDEGSSELNTLDVVQKIENALYTmNQQMESEIGYPVVKHSFINMSSRTSAFIFAELTKG 632
Cdd:PRK10503 555 IfipkgFFPVQDNGIIQGTLQAPQSSSFANMAQRQRQVADVILQ-DPAVQSLTSFVGVDGTNPSLNSARLQINLKPLDER 633
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 633 EDRDVDGVTIAEAWRKQLPD----LVAVKKLNINasTNDAGGDISFRFTSTDLEQLSAAAKELKQKLASYEGVYDIADNF 708
Cdd:PRK10503 634 DDRVQKVIARLQTAVAKVPGvdlyLQPTQDLTID--TQVSRTQYQFTLQATSLDALSTWVPKLMEKLQQLPQLSDVSSDW 711
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 709 SSGSHEIRLKI-RPEAEALGLTLSDlarqVRYGFYGYEAQRILRNKEEVKVMVRYPLEQRRT----IGHLENMMIRTPNG 783
Cdd:PRK10503 712 QDKGLVAYVNVdRDSASRLGISMAD----VDNALYNAFGQRLISTIYTQANQYRVVLEHNTEntpgLAALDTIRLTSSDG 787
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 784 MAVPFSTVAELELGESYSSITRVDGRRAITVTANANKDKV--EPSKVVQEIQEKF-MPElerkypHISASLDGASQDEQA 860
Cdd:PRK10503 788 GVVPLSSIATIEQRFGPLSINHLDQFPSTTISFNVPDGYSlgDAVQAIMDTEKTLnLPA------DITTQFQGSTLAFQS 861
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 861 AMVGLLQGFFFAIFTIYALMAIPLKSYSQPLIIMSVIPFGMIGALFGHFILGLSMSILSLCGIVALAGVVVNDSLILVDF 940
Cdd:PRK10503 862 ALGSTVWLIVAAVVAMYIVLGVLYESFIHPITILSTLPTAGVGALLALMIAGSELDVIAIIGIILLIGIVKKNAIMMIDF 941
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 941 VNRA-REQGQSVVKAAIDSGCYRFRAIILTSLTTFVGLVPIIMERSLQAQIVIPMATSLAFGILFSTLVTLILVPMLYII 1019
Cdd:PRK10503 942 ALAAeREQGMSPRDAIYQACLLRFRPILMTTLAALLGALPLMLSTGVGAELRRPLGICMVGGLIVSQVLTLFTTPVIYLL 1021
|
....*....
gi 765522869 1020 LDDLSHKSR 1028
Cdd:PRK10503 1022 FDRLALYTK 1030
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
338-1028 |
1.25e-21 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 101.09 E-value: 1.25e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 338 MFMGALLVFIILALFLDLKLAFWVMLGLPVCFLG---AMALMPMepFGLSINMLTLFAFILVLGIVVDDAIVIGESAHTE 414
Cdd:COG1033 222 IFFPLALLLILLLLFLFFRSLRGVLLPLLVVLLAviwTLGLMGL--LGIPLSPLTILVPPLLLAIGIDYGIHLLNRYREE 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 415 VERHGHSITNVIRGAKKVAMPATFGVLTTIAAFIPMLMVPGPMGiiwKSIGMIVILCLAFSLVESKFILPAHLAHMKPSK 494
Cdd:COG1033 300 RRKGLDKREALREALRKLGPPVLLTSLTTAIGFLSLLFSDIPPI---RDFGIVAAIGVLLAFLTSLTLLPALLSLLPRPK 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 495 PNPNPGPFGRFKRAFNEKVQHFIhhsyrnfmermIPHRYTLVAGFIGVLILSVAMVTsgkvrwvffpDIPSDFIQVNlEM 574
Cdd:COG1033 377 PKTRRLKKPPELGRLLAKLARFV-----------LRRPKVILVVALVLAVVSLYGIS----------RLKVEYDFED-YL 434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 575 DEGSSELNTLDVVQKienalytmnqqmeseigypvvkhsfiNMSSRTSAFIFAELTKGedrdvDGVTIAEAWRKqlpdlv 654
Cdd:COG1033 435 PEDSPIRQDLDFIEE--------------------------NFGGSDPLEVVVDTGEP-----DGLKDPEVLKE------ 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 655 avkklninastndaggdisfrftstdleqlsaaAKELKQKLASYEGVYDIadnfssgsheirlkirpeaealgLTLSDLA 734
Cdd:COG1033 478 ---------------------------------IDRLQDYLESLPEVGKV-----------------------LSLADLV 501
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 735 RQVRYGFYGYEAQrilrnkeevkvMVRYPlEQRRTIGHLENMMIRTPNGMAVPFSTvaelelgesyssitrVDGRRA-IT 813
Cdd:COG1033 502 KELNQALNEGDPK-----------YYALP-ESRELLAQLLLLLSSPPGDDLSRFVD---------------EDYSAArVT 554
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 814 VTANANKDKvEPSKVVQEIQEKFMPELERKYPHISASLDGASQDEQAAMV--GLLQGFFFAIFTIYALMAIPLKSYSQPL 891
Cdd:COG1033 555 VRLKDLDSE-EIKALVEEVRAFLAENFPPDGVEVTLTGSAVLFAAINESVieSQIRSLLLALLLIFLLLLLAFRSLRLGL 633
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 892 IIM--SVIPFGMIGALFGhfILGLSMSILSLCgIVALA-GVVVNDSLILVDFVNRAREQGQSVVKAAIDSGCYRFRAIIL 968
Cdd:COG1033 634 ISLipNLLPILLTFGLMG--LLGIPLNIATAV-VASIAlGIGVDYTIHFLSRYREERRKGGDLEEAIRRALRTTGKAILF 710
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 969 TSLTTFVGLVPIIMerSlQAQIVIPMATSLAFGILFSTLVTLILVPMLYIILDDLSHKSR 1028
Cdd:COG1033 711 TSLTLAAGFGVLLF--S-SFPPLADFGLLLALGLLVALLAALLLLPALLLLLDPRIAKKR 767
|
|
| PRK09579 |
PRK09579 |
multidrug efflux RND transporter permease subunit; |
647-1032 |
6.20e-17 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 169983 [Multi-domain] Cd Length: 1017 Bit Score: 86.43 E-value: 6.20e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 647 RKQLPDLVAVKKLNINASTNDAGGDISFRFTSTDLEQLSAAAKELKQ-KLASYEGVYDiADNFSSGSHEIRLKIRP-EAE 724
Cdd:PRK09579 116 KNQLPQDAEDPVLSKEAADASALMYISFYSEEMSNPQITDYLSRVIQpKLATLPGMAE-AEILGNQVFAMRLWLDPvKLA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 725 ALGLTLSDLARQVR-YGFYGYEAQRilrnKEEVKVMVRYPLEQRRTIGHLENMMIRTPNGMAVPFSTVAELELG-ESYSS 802
Cdd:PRK09579 195 GFGLSAGDVTQAVRrYNFLSAAGEV----KGEYVVTSINASTELKSAEAFAAIPVKTSGDSRVLLGDVARVEMGaENYDS 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 803 ITRVDGRRAITVTANANKDkVEPSKVVQEIQEKfMPELERKYP---HISASLDgASQDEQAAMVGLLQGFFFAIFTIYAL 879
Cdd:PRK09579 271 ISSFDGIPSVYIGIKATPS-ANPLDVIKEVRAI-MPELESQLPpnlKVSIAYD-ATLFIQASIDEVVKTLGEAVLIVIVV 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 880 MAIPLKSYSQPLIIMSVIPFGMIGALFGHFILGLSMSILSLCGIVALAGVVVNDSLILVDFVNRAREQGQSVVKAAIDSG 959
Cdd:PRK09579 348 VFLFLGALRSVLIPVVTIPLSMIGVLFFMQMMGYSINLLTLLAMVLAIGLVVDDAIVVVENIHRHIEEGKSPFDAALEGA 427
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 765522869 960 cyRFRAIILTSLTTFVGLV--PIIMERSLQAQIVIPMATSLAFGILFSTLVTLILVPMLYIILDDLSHKSRALYH 1032
Cdd:PRK09579 428 --REIAMPVVSMTITLAAVyaPIGFLTGLTGALFKEFALTLAGAVIISGIVALTLSPMMCALLLRHEENPSGLAH 500
|
|
| PRK09577 |
PRK09577 |
multidrug efflux RND transporter permease subunit; |
618-1036 |
4.24e-13 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 169981 [Multi-domain] Cd Length: 1032 Bit Score: 73.73 E-value: 4.24e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 618 SSRTSAFIFAELTKGEDRDVDGVTIAEAWR---KQLPDLVAVKKLNINASTNDAGGDISF-----RFTSTDLEQLSAAak 689
Cdd:PRK09577 82 SSAGQASLSLTFKQGVNADLAAVEVQNRLKtveARLPEPVRRDGIQVEKAADNIQLIVSLtsddgRLTGVELGEYASA-- 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 690 ELKQKLASYEGVYDIadnfSSGSHEIRLKIRPEAE---ALGLTLSDLARQVRygfyGYEAQRILRNKEEVKVMVRYPLEQ 766
Cdd:PRK09577 160 NVLQALRRVEGVGKV----QFWGAEYAMRIWPDPVklaALGLTASDIASAVR----AHNARVTIGDIGRSAVPDSAPIAA 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 767 R-------RTIGHLENMMIRT-PNGMAVPFSTVAELELGES-YSSITRVDGRRA--ITVTANANKDKVEPSKVVQ----E 831
Cdd:PRK09577 232 TvfadaplKTPEDFGAIALRArADGSALYLRDVARIEFGGNdYNYPSYVNGKTAtgMGIKLAPGSNAVATEKRVRatmdE 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 832 IQEKFMPELERKYPHISASLDGASqdeqaaMVGLLQGFFFAIFTIYALMAIPLKSYSQPLIIMSVIPFGMIGALFGHFIL 911
Cdd:PRK09577 312 LSRYFPPGVKYQIPYETSSFVRVS------MNKVVTTLIEAGVLVFLVMFLFMQNFRATLIPTLVVPVALLGTFGVMLAA 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 912 GLSMSILSLCGIVALAGVVVNDSLILVDFVNRAR-EQG----QSVVKAAID-SGCYRFRAIILTSLttfvgLVPIIMERS 985
Cdd:PRK09577 386 GFSINVLTMFGMVLAIGILVDDAIVVVENVERLMvEEGlspyDATVKAMKQiSGAIVGITVVLTSV-----FVPMAFFGG 460
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 765522869 986 LQAQIVIPMATSLAFGILFSTLVTLILVPMLYIIL----DDLSHKSRALYHWWWR 1036
Cdd:PRK09577 461 AVGNIYRQFALSLAVSIGFSAFLALSLTPALCATLlkpvDGDHHEKRGFFGWFNR 515
|
|
| 2A0601 |
TIGR00914 |
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation ... |
141-501 |
3.38e-11 |
|
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation antiporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 129992 [Multi-domain] Cd Length: 1051 Bit Score: 67.48 E-value: 3.38e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 141 IWVSVYGDmTLHDMKELAKEIRDEITNLPAVT--RAEVTGVRDYeIGIEVSEDKLREYGLTFTQVAQAVQNTSIDLPGGS 218
Cdd:TIGR00914 684 VAVKVFGD-DLDDLDATAEKISAVLKGVPGAAdvKVEQTTGLPY-LTVEIDREKAARYGLTVGDVQDTVATAVGGRMSGE 761
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 219 IRAQDG--DILLRTKGQAYTGDDFAN---IVVSTRADGSRVMLPM--VAEIKddFEERL-EYTRFDGMPAAIIE------ 284
Cdd:TIGR00914 762 TFEGDRrfDIVIRLPESLRESPQALRqlpIPLPLSEDARKQFIPLsdVADLR--VSPGPnQISRENGKRRVVVSanvrgr 839
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 285 -ITSIDDQNALAIADQVKgfiaerqatLPSGAKLDYWG---DLTHYLKgRLNMMLSnmfMGALLVFIIL-ALFLDLKLAF 359
Cdd:TIGR00914 840 dLGSFVDDAKKAIAEQVK---------LPPGYWITWGGqfeQLQSATK-RLQIVVP---VTLLLIFVLLyAAFGNVKDAL 906
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 360 WVMLGLPVCFLGAMALMPMEPFGLSINMLTlfAFILVLGIVVDDAIVIGESAHTEVERHGHSITNVIRGAKKVAMPATFG 439
Cdd:TIGR00914 907 LVFTGIPFALTGGVFALWLRGIPLSISAAV--GFIALSGVAVLNGLVMISFIRKLLEEGPSLDEAVYEGALTRVRPVLMT 984
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 765522869 440 VLTTIAAFIPMLMVPGPMGIIWKSIGMIVILCLAFSLVESKFILPA--HLAHMKPSKPNPNPGP 501
Cdd:TIGR00914 985 ALVASLGFVPMAIATGTGAEVQRPLATVVIGGIITATLLTLFVLPAlyRLVHRRRHKGRKEHEP 1048
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
227-496 |
1.65e-09 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 61.80 E-value: 1.65e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 227 LLRTKGQAYTGDDFANIVV-STRADGSRVMLPMVAEIKDDFEErleYTRFDGMPAAI-IEITSIDDQNALAIADQVKGFI 304
Cdd:COG1033 500 LVKELNQALNEGDPKYYALpESRELLAQLLLLLSSPPGDDLSR---FVDEDYSAARVtVRLKDLDSEEIKALVEEVRAFL 576
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 305 AERQAtlPSGAKLDYWGDLTHYLKGrLNMMLSNMFMGALLVFIILALFL-----DLKLAFWVMLGLPVCFLGAMALMPMe 379
Cdd:COG1033 577 AENFP--PDGVEVTLTGSAVLFAAI-NESVIESQIRSLLLALLLIFLLLllafrSLRLGLISLIPNLLPILLTFGLMGL- 652
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 380 pFGLSINMLTLFAFILVLGIVVDDAIVIGESAHTEVERHGHSITNVIRGAKKVAMPATFGVLTTIAAFIPMLMvpGPMGI 459
Cdd:COG1033 653 -LGIPLNIATAVVASIALGIGVDYTIHFLSRYREERRKGGDLEEAIRRALRTTGKAILFTSLTLAAGFGVLLF--SSFPP 729
|
250 260 270
....*....|....*....|....*....|....*..
gi 765522869 460 IwKSIGMIVILCLAFSLVESKFILPAHLAHMKPSKPN 496
Cdd:COG1033 730 L-ADFGLLLALGLLVALLAALLLLPALLLLLDPRIAK 765
|
|
| COG4258 |
COG4258 |
Predicted exporter [General function prediction only]; |
273-485 |
3.36e-08 |
|
Predicted exporter [General function prediction only];
Pssm-ID: 443400 [Multi-domain] Cd Length: 783 Bit Score: 57.55 E-value: 3.36e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 273 TRFDGMPAAIIEITSIDDQNAL-AIADQVKGFIAerqatlpsgakLDYWGDLTHYLKGRLNMMLSNMFMGALLVFIILAL 351
Cdd:COG4258 590 GRKDGQWAALVPLRGVDDAAALrAAAAGLPGVRL-----------VDRKAESSSLFGRYRNDALWLLLLALLLILLLLLL 658
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 352 FL-DLKLAFWVMLglP-----VCFLGAMALmpmepFGLSINMLTLFAFILVLGIVVDDAIVIGESAHTEVERHGHsitnv 425
Cdd:COG4258 659 RLrSLRRALRVLL--PpllavLLTLAILGL-----LGIPLNLFHLIALLLVLGIGIDYALFFTEGLLDKGELART----- 726
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 765522869 426 irgakKVAMpaTFGVLTTIAAF-------IPMLmvpgpmgiiwKSIGMIVILCLAFSLVESKFILPA 485
Cdd:COG4258 727 -----LLSI--LLAALTTLLGFgllafssTPAL----------RSFGLTVLLGILLALLLAPLLAPR 776
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
811-1032 |
3.40e-08 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 57.56 E-value: 3.40e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 811 AITVTANANKDKVEPSKVVQEIQEKfMPELERKYPHISASLDGASQDEQAAMVGLLQGFFF--AIFTIYALMAIPLKSYS 888
Cdd:COG1033 165 VVTLDPDPLSSDLDRKEVVAEIRAI-IAKYEDPGVEVYLTGFPVLRGDIAEAIQSDLAIFFplALLLILLLLFLFFRSLR 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 889 QPLIIMSVIPFGMIGALFGHFILGLSMSILSLCGIVALAGVVVNDSLILVDFVNRAREQGQSVVKAAIDSGCYRFRAIIL 968
Cdd:COG1033 244 GVLLPLLVVLLAVIWTLGLMGLLGIPLSPLTILVPPLLLAIGIDYGIHLLNRYREERRKGLDKREALREALRKLGPPVLL 323
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 765522869 969 TSLTTFVGL-------VPIIMErslqaqivipMATSLAFGILFSTLVTLILVPMLYIILDDLSHKSRALYH 1032
Cdd:COG1033 324 TSLTTAIGFlsllfsdIPPIRD----------FGIVAAIGVLLAFLTSLTLLPALLSLLPRPKPKTRRLKK 384
|
|
| 2A0601 |
TIGR00914 |
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation ... |
691-1033 |
6.98e-08 |
|
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation antiporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 129992 [Multi-domain] Cd Length: 1051 Bit Score: 56.69 E-value: 6.98e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 691 LKQKLASYEGVYDIAdnfSSGSHEIRLKIRPEAEAL---GLTLSDLARQVRYGFYGYEAQRILRNKEEVkvMVRYPlEQR 767
Cdd:TIGR00914 171 IRPQLRTVPGVAEVN---SIGGYVKQFLVAPDPEKLaayGLSLADVVNALERNNQNVGAGYIERRGEQY--LVRAP-GQV 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 768 RTIGHLENMMIRTPNGMAVPFSTVAELELG-ESYSSITRVDGRRAITVT------------ANANKDKVEPSKVVQEIQE 834
Cdd:TIGR00914 245 QSMDDIRNIVIATGEGVPIRIRDVARVQIGkELRTGAATENGKEVVLGTvfmligensrtvAQAVGDKLETINKTLPEGV 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 835 KFMPELERKyPHISASLDGASQDeqaamvgLLQGFFFAIFTIYALmaipLKSYSQPLIIMSVIPFGMIGALFGHFILGLS 914
Cdd:TIGR00914 325 EIVTTYDRS-QLVDAAIATVKKN-------LLEGALLVIVILFLF----LGNIRAALIAATVIPLSLLITFIGMVFQGIS 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 915 MSILSLcGIVALaGVVVNDSLILVDFVNRAREQGQS--------------VVKAAIDSGcyrfRAIILTSLTTFVGLVPI 980
Cdd:TIGR00914 393 ANLMSL-GALDF-GLIVDGAVVIVENAHRRLAEAQHhhgrqltlkerlheVFAASREVR----RPLIFGQLIITLVFLPI 466
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 765522869 981 IMERSLQAQIVIPMATSLAFGILFSTLVTLILVP--MLYIILDDLSHKSRALYHW 1033
Cdd:TIGR00914 467 FTLTGVEGKMFHPMAFTVVLALAGAMILSLTFVPaaVALFIRGKVAEKENRLMRV 521
|
|
| PRK10555 |
PRK10555 |
multidrug efflux RND transporter permease AcrD; |
781-1036 |
1.12e-07 |
|
multidrug efflux RND transporter permease AcrD;
Pssm-ID: 182544 [Multi-domain] Cd Length: 1037 Bit Score: 55.99 E-value: 1.12e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 781 PNGMAVPFSTVAELELG-ESYSSITRVDGRRA----ITVTANANKdkVEPSKVVQEiqekFMPELERKYPHisaSLDGAS 855
Cdd:PRK10555 255 QDGSEVTLGDVATVELGaEKYDYLSRFNGKPAsglgVKLASGANE--MATAKLVLN----RLDELAQYFPH---GLEYKV 325
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 856 QDE-----QAAMVGLLQGFFFAIFTIYALMAIPLKSYSQPLIIMSVIPFGMIGALFGHFILGLSMSILSLCGIVALAGVV 930
Cdd:PRK10555 326 AYEttsfvKASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSINTLTMFAMVLAIGLL 405
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 931 VNDSLILVDFVNR-AREQGQSVVKAAIDS-----GCYRFRAIILTSL---TTFVGLVPIIMERSLQAQIVIPMatslafg 1001
Cdd:PRK10555 406 VDDAIVVVENVERiMSEEGLTPREATRKSmgqiqGALVGIAMVLSAVfvpMAFFGGTTGAIYRQFSITIVSAM------- 478
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 765522869 1002 iLFSTLVTLILVPML-YIILDDLS----HKSRALYHWWWR 1036
Cdd:PRK10555 479 -VLSVLVAMILTPALcATLLKPLKkgehHGQKGFFGWFNR 517
|
|
| 2A067 |
TIGR00921 |
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized ... |
282-487 |
2.55e-07 |
|
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. They fall into seven phylogenetic families, this family (2.A.6.7) consists of uncharacterised putative transporters, largely in the Archaea. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273340 [Multi-domain] Cd Length: 719 Bit Score: 54.84 E-value: 2.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 282 IIEITSIDDQNALA-IADQVKGFIAErqATLPSGAKLDYWGDLTHYLKgRLNMMLSNM--FMGALLVFIILALFLDLKLA 358
Cdd:TIGR00921 141 IVQLKSDADYKQVVpIYNDVERSLER--TNPPSGKFLDVTGSPAINYD-IEREFGKDMgtTMAISGILVVLVLLLDFKRW 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 359 FWVMLGLPVCFLG-AMALMPMEPFGLSINMLTLFAFILVLGIVVDdaIVIGESAHTEVERH-GHSITNVIRGAKKVAMPA 436
Cdd:TIGR00921 218 WRPLLPLVIILFGvAWVLGIMGWLGIPLYATTLLAVPMLIGVGID--YGIQTLNRYEEERDiGRAKGEAIVTAVRRTGRA 295
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 765522869 437 TFG-VLTTIAAFIPMLMVPGPMgiiWKSIGMIVILCLAFSLVESKFILPAHL 487
Cdd:TIGR00921 296 VLIaLLTTSAGFAALALSEFPM---VSEFGLGLVAGLITAYLLTLLVLPALL 344
|
|
| HpnN |
TIGR03480 |
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing ... |
343-550 |
8.49e-07 |
|
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing members of this family share the machinery for the biosynthesis of hopanoid lipids. Furthermore, the genes of this family are usually located proximal to other components of this biological process. The proteins appear to be related to the RND family of export proteins, particularly the hydrophobe/amphiphile efflux-3 (HAE3) family represented by TIGR00921.
Pssm-ID: 274598 [Multi-domain] Cd Length: 862 Bit Score: 53.08 E-value: 8.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 343 LLVFIILALFL-DLKLAFWVMLGLPV--CFLGAMALMPMEPFglsiNMLTLfAF-ILVLGIVVDDAIVIGESAHTEVERH 418
Cdd:TIGR03480 280 VLVLVLLWLALrSPRLVFAVLVTLIVglILTAAFATLAVGHL----NLISV-AFaVLFIGLGVDFAIQFSLRYREERFRG 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 419 GHSITNVIRGAKKVAMPATFGVLTTIAAFIPMLmvpgP--------MGIIwKSIGMIVilCLAFSLVeskfILPAHLAHM 490
Cdd:TIGR03480 355 GNHREALSVAARRMGAALLLAALATAAGFFAFL----PtdykgvseLGII-AGTGMFI--ALFVTLT----VLPALLRLL 423
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 491 KPSKPNPNPGpfgrfkRAFNEKVQHFIHHsyrnfmermipHRYTLVAGFIGVLILSVAMV 550
Cdd:TIGR03480 424 RPPRRRKPPG------YATLAPLDAFLRR-----------HRRPVLGVTLILGIAALALL 466
|
|
| COG4258 |
COG4258 |
Predicted exporter [General function prediction only]; |
335-557 |
1.90e-05 |
|
Predicted exporter [General function prediction only];
Pssm-ID: 443400 [Multi-domain] Cd Length: 783 Bit Score: 48.70 E-value: 1.90e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 335 LSNMFMGALLVFI-----ILALFLdLKLAFWVMLGLPVCFLGamalmpmepFGlSINMLTL-FAFILvLGIVVDDAIvig 408
Cdd:COG4258 257 ISLLGILLLLLLVfrslrPLLLGL-LPVAVGALAGLAAVSLV---------FG-SVHGITLgFGSSL-IGVAVDYSL--- 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 409 esaHTEVERHGHSITNVIRGAKKVAMPATFGVLTTIAAFIPMLMVPGPmgiIWKSIGMIVILCLAFSLVESKFILPaHLA 488
Cdd:COG4258 322 ---HYLTHRRAAGEWDPRAALRRIWPTLLLGLLTTVLGYLALLFSPFP---GLRQLGVFAAAGLLAAALTTLLWLP-LLL 394
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 765522869 489 hmkPSKPNPNPGPFGRFKRAfnekvqhfihhsyrnfMERMIPHRYTLVAGFIGVLILsVAMVTSGKVRW 557
Cdd:COG4258 395 ---PRAAPRPPAPALALLAR----------------LLARWPRRLRWLLALLAVLAL-ASLLGLNRLKW 443
|
|
| HpnN |
TIGR03480 |
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing ... |
344-488 |
7.82e-05 |
|
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing members of this family share the machinery for the biosynthesis of hopanoid lipids. Furthermore, the genes of this family are usually located proximal to other components of this biological process. The proteins appear to be related to the RND family of export proteins, particularly the hydrophobe/amphiphile efflux-3 (HAE3) family represented by TIGR00921.
Pssm-ID: 274598 [Multi-domain] Cd Length: 862 Bit Score: 46.91 E-value: 7.82e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 344 LVFIILALFLDLKLAFWVMLGL-PVCFLGAMALMPMEPFGLSINMLTLFAFILVLGIVVDDAIVIGESAHTEVErHGHSI 422
Cdd:TIGR03480 722 LVAITVLLLLTLRRVRDVLLVLaPLLLAGLLTVAAMVLLGIPFNFANIIALPLLLGLGVDFGIYMVHRWRNGVD-SGNLL 800
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 765522869 423 TNvirgakKVAMPATFGVLTTIAAFIPMLMVPGPmGIiwKSIGMIVILCLAFSLVESKFILPAHLA 488
Cdd:TIGR03480 801 QS------STARAVFFSALTTATAFGSLAVSSHP-GT--ASMGILLSLGLGLTLLCTLIFLPALLG 857
|
|
| Patched |
pfam02460 |
Patched family; The transmembrane protein Patched is a receptor for the morphogene Sonic ... |
335-488 |
4.18e-04 |
|
Patched family; The transmembrane protein Patched is a receptor for the morphogene Sonic Hedgehog. This protein associates with the smoothened protein to transduce hedgehog signals.
Pssm-ID: 308203 [Multi-domain] Cd Length: 793 Bit Score: 44.27 E-value: 4.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 335 LSNMFMGALLVFIILALFL-DLKLAFWVMLGLPVCFLGAMALMPMepFGLSINMLTLFAFILVLGIVVDDAIVIgesAHT 413
Cdd:pfam02460 642 IQNIVITLICMFIVCFLFIpNPPCVFVITLAIASIDIGVFGFLSL--WGVDLDPISMITIIMSIGFSVDFSAHI---AYH 716
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 765522869 414 EVERHGHSITNVIRGA-KKVAMPATFGVLTTIAAFIPMLMVPGPMGIIW-KSigmiVILCLAFSLVESKFILPAHLA 488
Cdd:pfam02460 717 FVRSRGDTPAERVVDAlEALGWPVFQGGLSTILGVLVLLFVPSYMVVVFfKT----VFLVVAIGLLHGLFILPIILS 789
|
|
| PRK13023 |
PRK13023 |
protein translocase subunit SecDF; |
860-1016 |
8.31e-04 |
|
protein translocase subunit SecDF;
Pssm-ID: 171842 [Multi-domain] Cd Length: 758 Bit Score: 43.45 E-value: 8.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 765522869 860 AAMVGLLQGFFFAIFTIYALMAIPLKsysqpLIIMSVIpFGMIGAlfghfilglSMSILSLCGIVALAGVVVNDSLILVD 939
Cdd:PRK13023 288 ALVVGLFMVLSYGILGVIALVALVVN-----IIILTAV-LSLIGA---------SISLASIAGLVLTIGLAVDAHILIYE 352
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 765522869 940 FVNRAREQGQSVVKaAIDSGCYR-FRAIILTSLTTFVGLVPIIMersLQAQIVIPMATSLAFGILFSTLVTLILVPML 1016
Cdd:PRK13023 353 RVREDRRKGYSVVQ-AMESGFYRaLSTIVDANLTTLIAALVLFL---LGSGTVHGFALTVAIGIGTTLFTTLTFTRLL 426
|
|
| |
