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Conserved domains on  [gi|779792474|ref|WP_045326955|]
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MULTISPECIES: flagellar basal body rod protein FlgF [Enterobacter]

Protein Classification

flagellar basal body rod protein FlgF( domain architecture ID 11486070)

flagellar basal body rod protein FlgF is a component of the proximal portion of the basal body central rod of flagellar organelles

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
flgF PRK12640
flagellar basal body rod protein FlgF; Reviewed
 1-251 1.04e-145

flagellar basal body rod protein FlgF; Reviewed


:

Pssm-ID: 183642 [Multi-domain]  Cd Length: 246  Bit Score: 406.93  E-value: 1.04e-145
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474   1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVEGLSLPTRTLVTASTPGADMTPGQMDYTSRPLDV 80
Cdd:PRK12640   1 MDRALYTAMSGASQNLNQQAVVANNLANASTPGFRADLAQARAVPVFGEGLPTRVFALASTPGADFSPGPLQTTGRPLDV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474  81 ALQQDGWLAVQTADGSEGYTRNGNIQVSATGQL-TIQGHPVMGEAGPLTVPEGSELTIAADGTISALNPGDPANTVAPVG 159
Cdd:PRK12640  81 ALQGDGWLAVQAPDGSEAYTRNGSLQVDANGQLrTANGLPVLGDGGPIAVPPGAKITIGADGTISALPPGDPPNAVAEVG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474 160 RLKLVKAEAKDVQRGDDGMFRLtqaaqaTRGATLQADPSIRVMSGVLEGSNVKPVEAMTDMIASARRFEMQMKIISSVDE 239
Cdd:PRK12640 161 RLKLVNPPAAQLTRGDDGLFRT------TDGAPAPADPTVRVMSGALEGSNVNAVEEMVSMIALARQFEMQVKMMKTADE 234

                        250
                 ....*....|..
gi 779792474 240 NAGKANQLLSMS 251
Cdd:PRK12640 235 NAQAANQLLRMS 246
 
Name Accession Description Interval E-value
flgF PRK12640
flagellar basal body rod protein FlgF; Reviewed
 1-251 1.04e-145

flagellar basal body rod protein FlgF; Reviewed


Pssm-ID: 183642 [Multi-domain]  Cd Length: 246  Bit Score: 406.93  E-value: 1.04e-145
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474   1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVEGLSLPTRTLVTASTPGADMTPGQMDYTSRPLDV 80
Cdd:PRK12640   1 MDRALYTAMSGASQNLNQQAVVANNLANASTPGFRADLAQARAVPVFGEGLPTRVFALASTPGADFSPGPLQTTGRPLDV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474  81 ALQQDGWLAVQTADGSEGYTRNGNIQVSATGQL-TIQGHPVMGEAGPLTVPEGSELTIAADGTISALNPGDPANTVAPVG 159
Cdd:PRK12640  81 ALQGDGWLAVQAPDGSEAYTRNGSLQVDANGQLrTANGLPVLGDGGPIAVPPGAKITIGADGTISALPPGDPPNAVAEVG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474 160 RLKLVKAEAKDVQRGDDGMFRLtqaaqaTRGATLQADPSIRVMSGVLEGSNVKPVEAMTDMIASARRFEMQMKIISSVDE 239
Cdd:PRK12640 161 RLKLVNPPAAQLTRGDDGLFRT------TDGAPAPADPTVRVMSGALEGSNVNAVEEMVSMIALARQFEMQVKMMKTADE 234

                        250
                 ....*....|..
gi 779792474 240 NAGKANQLLSMS 251
Cdd:PRK12640 235 NAQAANQLLRMS 246
FlgF COG4787
Flagellar basal body rod protein FlgF [Cell motility];
1-251 7.49e-144

Flagellar basal body rod protein FlgF [Cell motility];


Pssm-ID: 443817 [Multi-domain]  Cd Length: 246  Bit Score: 402.20  E-value: 7.49e-144
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474   1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVEGLSLPTRTLVTASTPGADMTPGQMDYTSRPLDV 80
Cdd:COG4787    1 MDRLIYTAMSGAKQTLEAQAVTANNLANASTTGFRADLEAARAVPVQGEGLPTRAFAVTETPGTDFSPGPLQQTGRPLDV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474  81 ALQQDGWLAVQTADGSEGYTRNGNIQVSATGQL-TIQGHPVMGEAGPLTVPEGSELTIAADGTISALNPGDPANTVAPVG 159
Cdd:COG4787   81 AIQGDGWLAVQAPDGSEAYTRAGDLQVDANGQLvTGNGLPVLGDGGPITIPPGAKVTIGADGTISIVPAGGPPNALAEVG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474 160 RLKLVKAEAKDVQRGDDGMFRLTQaaqatrGATLQADPSIRVMSGVLEGSNVKPVEAMTDMIASARRFEMQMKIISSVDE 239
Cdd:COG4787  161 RLKLVNPDPAQLVKGDDGLFRLKD------GGPLPADPNVRVVSGALEGSNVNAVEEMVSMISLARQFEMQMKMMKTADE 234

                        250
                 ....*....|..
gi 779792474 240 NAGKANQLLSMS 251
Cdd:COG4787  235 NDQAANQLLRLS 246
FlgEFG_subfam TIGR03506
flagellar hook-basal body protein; This model encompasses three closely related flagellar ...
 4-230 2.90e-63

flagellar hook-basal body protein; This model encompasses three closely related flagellar proteins usually denoted FlgE, FlgF and FlgG. The names have often been mis-assigned, however. Three equivalog models, TIGR02489, TIGR02490 and TIGR02488, respectively, separate the individual forms into three genome-context consistent groups. The major differences between these genes are architectural, with variable central sections between relatively conserved N- and C-terminal domains. More distantly related are two other flagellar apparatus familis, FlgC (TIGR01395) which consists of little else but the N-and C-terminal domains and FlgK (TIGR02492) with a substantial but different central domain.


Pssm-ID: 274616 [Multi-domain]  Cd Length: 231  Bit Score: 197.47  E-value: 2.90e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474    4 AIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVEGLS--LPTRTLVTASTPGADMTPGQMDYTSRPLDVA 81
Cdd:TIGR03506   2 ALYTALSGLNAQSSALDVIANNIANANTTGFKRSRAEFQDLLSQSVSgsGQVGGGVRTSGVATDFSQGSLQSTGNSLDLA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474   82 LQQDGWLAVQTADGSEGYTRNGNIQVSATGQL-TIQGHPVMGEA-GPLTVPE-GSELTIAADGTISALNPGDpanTVAPV 158
Cdd:TIGR03506  82 ISGDGFFVVQTPDGSEAYTRAGSFKLDADGYLvTSDGYPLLDWGgGPITLPPdAGSVSIGEDGTVSATYSNG---QTVEL 158

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 779792474  159 GRLKLVKAEAKD-VQRGDDGMFRLTQAAQATRGATLQADPSIRVMSGVLEGSNVKPVEAMTDMIASARRFEMQ 230
Cdd:TIGR03506 159 GQIALANFPNPDgLRKEGGNLYSATPGSGAALVGAPGTGGFGTLVSGALEGSNVDLAEELVNMISAQRAYQAN 231
Flg_bbr_C pfam06429
Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of ...
 170-247 2.38e-20

Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which pfam00460 is often present at the extreme N terminus.


Pssm-ID: 428939 [Multi-domain]  Cd Length: 74  Bit Score: 81.93  E-value: 2.38e-20
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 779792474  170 DVQRGDDGMFRLTQAAqatrgATLQADPSIRVMSGVLEGSNVKPVEAMTDMIASARRFEMQMKIISSVDENAGKANQL 247
Cdd:pfam06429   2 GLEKGGDNLFRETDGA-----PILGAGADGRVQQGYLEGSNVNPVEEMVNMIEAQRAYEANSKVIQTADEMLQTANQL 74
 
Name Accession Description Interval E-value
flgF PRK12640
flagellar basal body rod protein FlgF; Reviewed
 1-251 1.04e-145

flagellar basal body rod protein FlgF; Reviewed


Pssm-ID: 183642 [Multi-domain]  Cd Length: 246  Bit Score: 406.93  E-value: 1.04e-145
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474   1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVEGLSLPTRTLVTASTPGADMTPGQMDYTSRPLDV 80
Cdd:PRK12640   1 MDRALYTAMSGASQNLNQQAVVANNLANASTPGFRADLAQARAVPVFGEGLPTRVFALASTPGADFSPGPLQTTGRPLDV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474  81 ALQQDGWLAVQTADGSEGYTRNGNIQVSATGQL-TIQGHPVMGEAGPLTVPEGSELTIAADGTISALNPGDPANTVAPVG 159
Cdd:PRK12640  81 ALQGDGWLAVQAPDGSEAYTRNGSLQVDANGQLrTANGLPVLGDGGPIAVPPGAKITIGADGTISALPPGDPPNAVAEVG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474 160 RLKLVKAEAKDVQRGDDGMFRLtqaaqaTRGATLQADPSIRVMSGVLEGSNVKPVEAMTDMIASARRFEMQMKIISSVDE 239
Cdd:PRK12640 161 RLKLVNPPAAQLTRGDDGLFRT------TDGAPAPADPTVRVMSGALEGSNVNAVEEMVSMIALARQFEMQVKMMKTADE 234

                        250
                 ....*....|..
gi 779792474 240 NAGKANQLLSMS 251
Cdd:PRK12640 235 NAQAANQLLRMS 246
FlgF COG4787
Flagellar basal body rod protein FlgF [Cell motility];
1-251 7.49e-144

Flagellar basal body rod protein FlgF [Cell motility];


Pssm-ID: 443817 [Multi-domain]  Cd Length: 246  Bit Score: 402.20  E-value: 7.49e-144
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474   1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVEGLSLPTRTLVTASTPGADMTPGQMDYTSRPLDV 80
Cdd:COG4787    1 MDRLIYTAMSGAKQTLEAQAVTANNLANASTTGFRADLEAARAVPVQGEGLPTRAFAVTETPGTDFSPGPLQQTGRPLDV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474  81 ALQQDGWLAVQTADGSEGYTRNGNIQVSATGQL-TIQGHPVMGEAGPLTVPEGSELTIAADGTISALNPGDPANTVAPVG 159
Cdd:COG4787   81 AIQGDGWLAVQAPDGSEAYTRAGDLQVDANGQLvTGNGLPVLGDGGPITIPPGAKVTIGADGTISIVPAGGPPNALAEVG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474 160 RLKLVKAEAKDVQRGDDGMFRLTQaaqatrGATLQADPSIRVMSGVLEGSNVKPVEAMTDMIASARRFEMQMKIISSVDE 239
Cdd:COG4787  161 RLKLVNPDPAQLVKGDDGLFRLKD------GGPLPADPNVRVVSGALEGSNVNAVEEMVSMISLARQFEMQMKMMKTADE 234

                        250
                 ....*....|..
gi 779792474 240 NAGKANQLLSMS 251
Cdd:COG4787  235 NDQAANQLLRLS 246
flgF PRK12643
flagellar basal body rod protein FlgF; Reviewed
 1-211 2.20e-86

flagellar basal body rod protein FlgF; Reviewed


Pssm-ID: 139117 [Multi-domain]  Cd Length: 209  Bit Score: 255.54  E-value: 2.20e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474   1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVEGLSLPTRTLVTASTPGADMTPGQMDYTSRPLDV 80
Cdd:PRK12643   1 MDHAIYTAMGAARQSLELQAVTANNLANASTPGFRAQLAAMRAVPIDGPSLATRTMVTTSTPGVDISQGTMNFSGRPLDV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474  81 ALQQDGWLAVQTADGSEGYTRNGNIQVSATGQLTIQGHPVMGEAGPLTVPEGSELTIAADGTISALNPGDPANTVAPVGR 160
Cdd:PRK12643  81 ALQQDGYLAVQLPDGSEAYTRNGNIQISANGQMTVQGYPLMGDNGPIDVPPQAAVTIAADGTISALNAGDSPNTIAQLGQ 160

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 779792474 161 LKLVKAEAKDVQRGDDGMFRLTQAAQATRGATLQADPSIRvmSGVLEGSNV 211
Cdd:PRK12643 161 IKRVQATAGEMMHGDDGLFHLTPETQQARGAQLPNDPLVK--PGEREHQWL 209
FlgEFG_subfam TIGR03506
flagellar hook-basal body protein; This model encompasses three closely related flagellar ...
 4-230 2.90e-63

flagellar hook-basal body protein; This model encompasses three closely related flagellar proteins usually denoted FlgE, FlgF and FlgG. The names have often been mis-assigned, however. Three equivalog models, TIGR02489, TIGR02490 and TIGR02488, respectively, separate the individual forms into three genome-context consistent groups. The major differences between these genes are architectural, with variable central sections between relatively conserved N- and C-terminal domains. More distantly related are two other flagellar apparatus familis, FlgC (TIGR01395) which consists of little else but the N-and C-terminal domains and FlgK (TIGR02492) with a substantial but different central domain.


Pssm-ID: 274616 [Multi-domain]  Cd Length: 231  Bit Score: 197.47  E-value: 2.90e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474    4 AIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVEGLS--LPTRTLVTASTPGADMTPGQMDYTSRPLDVA 81
Cdd:TIGR03506   2 ALYTALSGLNAQSSALDVIANNIANANTTGFKRSRAEFQDLLSQSVSgsGQVGGGVRTSGVATDFSQGSLQSTGNSLDLA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474   82 LQQDGWLAVQTADGSEGYTRNGNIQVSATGQL-TIQGHPVMGEA-GPLTVPE-GSELTIAADGTISALNPGDpanTVAPV 158
Cdd:TIGR03506  82 ISGDGFFVVQTPDGSEAYTRAGSFKLDADGYLvTSDGYPLLDWGgGPITLPPdAGSVSIGEDGTVSATYSNG---QTVEL 158

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 779792474  159 GRLKLVKAEAKD-VQRGDDGMFRLTQAAQATRGATLQADPSIRVMSGVLEGSNVKPVEAMTDMIASARRFEMQ 230
Cdd:TIGR03506 159 GQIALANFPNPDgLRKEGGNLYSATPGSGAALVGAPGTGGFGTLVSGALEGSNVDLAEELVNMISAQRAYQAN 231
flgF PRK12641
flagellar basal-body rod protein FlgF;
1-251 8.12e-62

flagellar basal-body rod protein FlgF;


Pssm-ID: 105809 [Multi-domain]  Cd Length: 252  Bit Score: 194.78  E-value: 8.12e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474   1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLN-ALRAVPVEGLSLPTRTLVTASTpgaDMTPGQMDYTSRPLD 79
Cdd:PRK12641   1 MENSIYKSMIAANKLLEKQAIIANNLANISTTGFKEKFIlAIQNHNVKNLYNSDKKITKEYY---NLSPGTLRYTGRNLD 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474  80 VALQQDGWLAVQTADGSEGYTRNGNIQVSATGQLTIQGHPVMGEAGPLTVPEGSELTIAADGTISALNPGDPANTVAPVG 159
Cdd:PRK12641  78 LFIKDNGWLTIKDTNGQEAYTKNGHLKINSKRKLTVQNNEVIGNNGNIIIPKNINLKISSNGVITSIKNNHKHIVETKIG 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474 160 RLKLVKAEAKDVQRGDDGMFRLTQAAQA--TRGATLQADPSIRVMSGVLEGSNVKPVEAMTDMIASARRFEMQMKIISSV 237
Cdd:PRK12641 158 SLKLVQLPSQDLIQKENGLFYLKKNNEInkKHTKNIKHSSKIRVQSGMLEESNVNASKNMIEMISNARQFEMQMKIISMC 237

                        250
                 ....*....|....
gi 779792474 238 DENAGKANQLLSMS 251
Cdd:PRK12641 238 DQNTEYANQLININ 251
FlgG COG4786
Flagellar basal body rod protein FlgG [Cell motility];
5-249 6.09e-57

Flagellar basal body rod protein FlgG [Cell motility];


Pssm-ID: 443816 [Multi-domain]  Cd Length: 260  Bit Score: 182.32  E-value: 6.09e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474   5 IYTA-MGAASQTLNQQaVTASNLANASTPGFRAQ-----------------LNALRAVPVEGLSLPTRTLVTASTPgaDM 66
Cdd:COG4786    1 LYTAaSGMLAQQTRLD-VISNNLANVNTTGFKRDravfedllyqlirrpgaPSSQGTQTPVGLQLGTGVRVAATQT--DF 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474  67 TPGQMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGNIQVSATGQL-TIQGHPVMGEAGPLTVPEG-SELTIAADGTIS 144
Cdd:COG4786   78 TQGSLQQTGNPLDLAIEGDGFFQVQTPDGETAYTRDGSFQLDADGQLvTSDGYPVLPENGPITIPEDaTSITISEDGTVS 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474 145 ALnpgDPANTVAPVGRLKLVKAEAKD-VQRGDDGMFRLTQAAQATRGATLQADPSIRVMSGVLEGSNVKPVEAMTDMIAS 223
Cdd:COG4786  158 VT---LADGDGQQVGQLGLVDFANPAgLEKVGDNLFRETAASGAPIVGTPGEDGLGTLRQGYLEGSNVDVVEEMVDMIEA 234

                        250       260
                 ....*....|....*....|....*.
gi 779792474 224 ARRFEMQMKIISSVDENAGKANQLLS 249
Cdd:COG4786  235 QRAYEANSKVIQTADEMLGKANNLRG 260
flgG_G_neg TIGR02488
flagellar basal-body rod protein FlgG, Gram-negative bacteria; This family consists of the ...
 4-248 1.06e-34

flagellar basal-body rod protein FlgG, Gram-negative bacteria; This family consists of the FlgG protein of the flagellar apparatus in the Proteobacteria and spirochetes. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 131541 [Multi-domain]  Cd Length: 259  Bit Score: 124.77  E-value: 1.06e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474    4 AIYTA-MGAASQTLNQQaVTASNLANASTPGF---RAQLNALRAVPVEGLSLPTRTLVTASTPGA-------------DM 66
Cdd:TIGR02488   1 ALWTAaTGMNAQQTNMD-VISNNLANVNTTGFkkdRAEFEDLLYQTERQPGAQSSEQQTILPVGVqvglgvrvvatqkLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474   67 TPGQMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGNIQVSATGQL-TIQGHPVMGEagpLTVPEG-SELTIAADGTIS 144
Cdd:TIGR02488  80 TQGSLQNTGNDLDLAIEGEGFFQVLMPDGTTAYTRDGAFKINAEGQLvTSNGYPLQPE---ITIPENaTSITVGSDGEVS 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474  145 ALNPGDPANTVapVGRLKLVKAEAKD-VQRGDDGMFRLTQAAQATRGATLQADPSIRVMSGVLEGSNVKPVEAMTDMIAS 223
Cdd:TIGR02488 157 VRQGGQTEPQE--VGQITLATFINPAgLEAVGENLFRETPASGPPQIGTPGLDGFGKLRQGFLEASNVNVVQEMVDMITA 234

                         250       260
                  ....*....|....*....|....*
gi 779792474  224 ARRFEMQMKIISSVDENAGKANQLL 248
Cdd:TIGR02488 235 QRAYEMNSKAIQASDQMLQTVSQLL 259
flgF PRK12689
flagellar basal-body rod protein FlgF;
18-249 8.69e-34

flagellar basal-body rod protein FlgF;


Pssm-ID: 183684 [Multi-domain]  Cd Length: 253  Bit Score: 122.55  E-value: 8.69e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474  18 QQAVTASNLANASTPGFRAQlnalRAVPVEGLS---------LPTRTLVTASTPGA--DMTPGQMDYTSRPLDVALQQDG 86
Cdd:PRK12689  18 QLDVVANNVANVNTNGFKAR----SSLFQEYLMpgahednfqRPDRRVSYVQDRGTplDLSQGPLEQTKNPLDVAIDGDA 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474  87 WLAVQTADGsEGYTRNGNIQVSATGQL-TIQGHPVMGEAGPLTV-PEGSELTIAADGTISALNPGDPANTVApvGRLKLV 164
Cdd:PRK12689  94 FLAVQTPQG-ERYTRDGALEINAQGQLvTSDGYPVLGTGGPITFqPTDTGIAISPDGTVSVNEGTATTDSIR--GKLRLV 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474 165 K-AEAKDVQRGDDGMFRLTQAAQAtrgatlqADPSIRVMSGVLEGSNVKPVEAMTDMIASARRFEMQMKIISSVDENAGK 243
Cdd:PRK12689 171 TfANPQALKKEGANLYAATAPARP-------ADTKARVEQGYIERSNVNPVLEMTRMMEVNRTYTQVSSMLQQQSDLRKT 243


                 ....*.
gi 779792474 244 ANQLLS 249
Cdd:PRK12689 244 AIERLA 249
flgG PRK12693
flagellar basal body rod protein FlgG; Provisional
 1-248 4.65e-32

flagellar basal body rod protein FlgG; Provisional


Pssm-ID: 183687 [Multi-domain]  Cd Length: 261  Bit Score: 118.04  E-value: 4.65e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474   1 MDHAIYTA-MGAASQTLNQqAVTASNLANASTPGFRAQlnalRAV----------------------PVeGLSLPTRTLV 57
Cdd:PRK12693   1 MIRALWIAkTGLDAQQTNI-DVISNNLANVNTTGFKKS----RAVfedllyqtirqpgaqssqnttlPS-GLQVGTGVRP 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474  58 TASTpgADMTPGQMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGNIQVSATGQL-TIQGHPVMGEagpLTVPEGSE-L 135
Cdd:PRK12693  75 VATQ--KIFTQGNLQQTGNSLDVAIEGQGFFQVQLPDGTIAYTRDGSFKLDQDGQLvTSGGYPLQPE---ITIPENATsI 149

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474 136 TIAADGTISALNPGDPANTVapVGRLKLVK-AEAKDVQRGDDGMFRLTQAAqatrGATLQADPSIR----VMSGVLEGSN 210
Cdd:PRK12693 150 TIGTDGTVSVTQAGQAAPQV--VGQITLTDfINPAGLESIGENLYLETAAS----GAPIEGTPGLNglgtLRQGFLETSN 223

                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 779792474 211 VKPVEAMTDMIASARRFEMQMKIISSVDENAGKANQLL 248
Cdd:PRK12693 224 VNVVEELVNMITGQRAYEMNSKAISTADQMLQYVNQLL 261
flgF PRK12690
flagellar hook-basal body complex protein;
1-239 4.96e-30

flagellar hook-basal body complex protein;


Pssm-ID: 183685 [Multi-domain]  Cd Length: 238  Bit Score: 112.08  E-value: 4.96e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474   1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQlNALRAVPVEGLSLPTRTLVTASTPG--ADMTPGQMDYTSRPL 78
Cdd:PRK12690   1 MDNAGYTTLTRQSGLMREMQVVANNIANASTTGFRRE-GLVFSEYVKSLDSGEASLSMARASGrqTDLEQGGLTQTGGQF 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474  79 DVALQQDGWLAVQTADGsEGYTRNGNIQVSATGQL-TIQGHPVMGEAG-PLTVPEGSE-LTIAADGTISAlnPGDpantv 155
Cdd:PRK12690  80 DFAIEGEGFFMVETPQG-ERLTRAGSFTPNAEGELvDPDGNRLLDAGGaPIFIPPDARsVAVGADGTLSA--DGQ----- 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474 156 aPVGRLKLVKA-EAKDVQRGDDGMFRLTQAAQATRGAtlqadpsiRVMSGVLEGSNVKPVEAMTDMIASARRFEMQMKII 234
Cdd:PRK12690 152 -PLGQIGLYQPtDPLGLRREGGTRFRAEGGVEPAEGA--------RLLQGFLEGSNVNPVSEIARMIEVQRAYELGQSFL 222


                 ....*
gi 779792474 235 SSVDE 239
Cdd:PRK12690 223 DREDE 227
flgF PRK12642
flagellar basal-body rod protein FlgF;
1-248 5.55e-28

flagellar basal-body rod protein FlgF;


Pssm-ID: 237153 [Multi-domain]  Cd Length: 241  Bit Score: 106.67  E-value: 5.55e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474   1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVpvegLSLPTRTLVTASTPGADMT---PGQMDYTSRP 77
Cdd:PRK12642   1 MQSGLYVALSSQMALEKRLDTIADNVANVNTVGFRATEVKFDTV----VSDTASKKVAFVSQGKSYLsteAGPLTKTGNP 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474  78 LDVALQQDGWLAVQTADGSeGYTRNGNIQVSATGQL-TIQGHPVMGEAG-PLTV-PEGSELTIAADGTISAlnpgdpaNT 154
Cdd:PRK12642  77 LDFAVKGDAWFSFDTPAGQ-VYTRDGRFTMTSTGELvSVTGYPVLDAGGaPIQLnPGGGEPTIGADGAIYQ-------NG 148

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474 155 VaPVGRLKLVKAEA-KDVQRGDDGMFRLTQAAQAtrgatLQADPSIRVMSGVLEGSNVKPVEAMTDMIASARRFEMQMKI 233
Cdd:PRK12642 149 V-QVGAIGLFEIDAdAGLLRYGNSGVIPDKPPQP-----VVDRNSVGVVQGYLEGSNVNAMTEMTQLISVSRAFESVSSL 222

                        250
                 ....*....|....*
gi 779792474 234 ISSVDENAGKANQLL 248
Cdd:PRK12642 223 MRQSESSVSEAIKTL 237
flgG PRK12818
flagellar basal body rod protein FlgG; Reviewed
 1-244 3.76e-24

flagellar basal body rod protein FlgG; Reviewed


Pssm-ID: 183768 [Multi-domain]  Cd Length: 256  Bit Score: 97.08  E-value: 3.76e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474   1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAqlNALRAVPVEGLSL----------PTRTLVTASTPGADM---- 66
Cdd:PRK12818   1 MIRGLYTAVSGMITLEAKQDVITNNLANVNTVGYKS--DNLAFKSFEDVLIenydkkvgnkNVKNIIGGLSMGSKIdevn 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474  67 ---TPGQMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGNIQVSATGQL-TIQGHPVMGE------AGPLTVPEGsELT 136
Cdd:PRK12818  79 tlfTQGIIKSTDKPTDFAIQGRGFFTVERNAGNNYYTRDGHFHVDTQGYLvNDSGYYVLGRnnatgaREPINVGNG-KFS 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474 137 IAADGTISalnpgdpantVAPVGRLKLVKA---EAKDVQRGDDGMFRLTQAAQATRGATLQadpsirvmsGVLEGSNVKP 213
Cdd:PRK12818 158 TDADGNIS----------LDGNASYKFNVAdfnDYNSLKKIGDNLYTGNNPQNINGAIVRQ---------NSLEKSNVNV 218

                        250       260       270
                 ....*....|....*....|....*....|.
gi 779792474 214 VEAMTDMIASARRFEMQMKIISSVDENAGKA 244
Cdd:PRK12818 219 TNEMVNMMTTMRSFETNQKIVQSIDETLGKA 249
flgG PRK12636
flagellar basal body rod protein FlgG; Provisional
 1-239 1.14e-23

flagellar basal body rod protein FlgG; Provisional


Pssm-ID: 183640 [Multi-domain]  Cd Length: 263  Bit Score: 95.98  E-value: 1.14e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474   1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGF---RAQLNALRAVPVEGLSLPT--RTLVTASTPGADMTPGQMD--- 72
Cdd:PRK12636   1 MLRSMYSGISGMKNFQTKLDVIGNNIANVNTYGFkksRVTFKDMVSQTISGASGPTanRGGVNSKQVGLGSQLGAIDtih 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474  73 ------YTSRPLDVALQQDGWLAVQTADGSEgYTRNGNIQVSATGQL-TIQGHPVMGEAG-PLTVPEGSE-LTIAADGTI 143
Cdd:PRK12636  81 tqgslqTTGRPLDLAISGDGFFRVGDGDNTA-YTRAGNFYLDNEGNIvNADGLYLLGMNGgRIQIPTDAQsFSIGADGTV 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474 144 SALnpgDPANTVAPVGRLKLVK-AEAKDVQRGDDGMFRLTQAAQATRGATLQADPSIRVMSGVLEGSNVKPVEAMTDMIA 222
Cdd:PRK12636 160 SYV---DAGGELQTAGQIGLATfANPDGLEKAGDNLYRETLNSGTPSAVVPGEGGTGKIVSGALEMSNVDLAEEFTEMIV 236

                        250
                 ....*....|....*..
gi 779792474 223 SARRFEMQMKIISSVDE 239
Cdd:PRK12636 237 AQRGFQANTRIITTSDE 253
flgG PRK12817
flagellar basal body rod protein FlgG; Reviewed
 7-247 4.72e-23

flagellar basal body rod protein FlgG; Reviewed


Pssm-ID: 183767 [Multi-domain]  Cd Length: 260  Bit Score: 94.37  E-value: 4.72e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474   7 TAMGAASQTLNqqaVTASNLANASTPGFRAQ-----------LNALRAVPVEGLSLPTRTLVTASTPGADMTPGQMDYTS 75
Cdd:PRK12817  10 SGMNAQQEKLD---SISNNLANVNTTGYKREdvsfsdlvyetLDRKGYPTNDKPEIITGTGVKATNWIRDNQQGNLLTTG 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474  76 RPLDVALQQDGWLAVQTADGSEGYTRNGNIQVSATGQLT--------IQGHPVMGEAGPLTVPEGSELTIAADGTISALN 147
Cdd:PRK12817  87 NKTDLAIDGEGFFRVIMADGTYAYTRAGNFNIDSNGMLVddngnrleIQLEAGVGINNRNTGFDSNNFTVDEDGGISVKN 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474 148 PGdpaNTVAPVGRLKLVKAeakdvqRGDDGMFRLTQAA-QATRGATLQADPSIRVMSGVLEGSNVKPVEAMTDMIASARR 226
Cdd:PRK12817 167 VD---GQNKKVGKINIYNA------VGNDAFISIGDNLyVPSDGVQVFLNNDVDILQGYLENSNVDLGKEMTDMIITQRA 237

                        250       260
                 ....*....|....*....|.
gi 779792474 227 FEMQMKIISSVDENAGKANQL 247
Cdd:PRK12817 238 FQLSSKGIKTADEMWGIINNM 258
flgG PRK12816
flagellar basal body rod protein FlgG; Reviewed
 1-247 3.79e-21

flagellar basal body rod protein FlgG; Reviewed


Pssm-ID: 183766 [Multi-domain]  Cd Length: 264  Bit Score: 89.10  E-value: 3.79e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474   1 MDHAIYTAmgaASQTLNQQA---VTASNLANASTPGFRAQlnalRAvpvEGLSLPTRTLVTASTPGADMT---------- 67
Cdd:PRK12816   1 MMRSLWTA---ASGMNAQQFnidTIANNLANVNTTGFKKI----RA---EFEDLIYQTQRRAGTPATEDTvtplgvqvgh 70

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474  68 ------------PGQMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGNIQVSATGQL-TIQGHPVMGEagpLTVPEG-- 132
Cdd:PRK12816  71 gvkvaatqrlfeQGSLQATGNKLDVAIEGEGFFKILMPDGTYAYTRDGSFKIDANGQLvTSNGYRLLPE---IIFPENyi 147

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474 133 -SELTIAADGTISAL--NPGDPANtvapVGRLKLVK-AEAKDVQRGDDGMFRLTQAAQATRGATLQADPSIRVMSGVLEG 208
Cdd:PRK12816 148 lNSITISEEGIVSVKvgEDNDPIE----LGQIELYRfVNPAGLSAIGKNLFKETIASGQEIPGIPGSEGFGRVLQGFLEM 223

                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 779792474 209 SNVKPVEAMTDMIASARRFEMQMKIISSVDENAGKANQL 247
Cdd:PRK12816 224 SNVSIVEEMVTMIVAQRAYEINSKAIQTSDNMLGTANNL 262
flgF TIGR02490
flagellar basal-body rod protein FlgF; Members of this protein are FlgF, one of several ...
 127-228 1.98e-20

flagellar basal-body rod protein FlgF; Members of this protein are FlgF, one of several homologous flagellar basal-body rod proteins in bacteria. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274160 [Multi-domain]  Cd Length: 89  Bit Score: 82.68  E-value: 1.98e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474  127 LTVPEGSELTIAADGTISAlnpgdpaNTVaPVGRLKLVKAEAKD-VQRGDDGMFRltqaaqATRGATLQADPSIRVMSGV 205
Cdd:TIGR02490   1 IVLPPDGDITIGADGTISQ-------DGE-EVGRLGLVNFDNPNqLQREGDGLFR------ATGGGPAPADSNVRVVQGY 66

                          90       100
                  ....*....|....*....|...
gi 779792474  206 LEGSNVKPVEAMTDMIASARRFE 228
Cdd:TIGR02490  67 LEGSNVNAVSEMVDMIEAQRAYE 89
Flg_bbr_C pfam06429
Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of ...
 170-247 2.38e-20

Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which pfam00460 is often present at the extreme N terminus.


Pssm-ID: 428939 [Multi-domain]  Cd Length: 74  Bit Score: 81.93  E-value: 2.38e-20
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 779792474  170 DVQRGDDGMFRLTQAAqatrgATLQADPSIRVMSGVLEGSNVKPVEAMTDMIASARRFEMQMKIISSVDENAGKANQL 247
Cdd:pfam06429   2 GLEKGGDNLFRETDGA-----PILGAGADGRVQQGYLEGSNVNPVEEMVNMIEAQRAYEANSKVIQTADEMLQTANQL 74
flgG PRK12692
flagellar basal body rod protein FlgG; Reviewed
 8-242 5.56e-20

flagellar basal body rod protein FlgG; Reviewed


Pssm-ID: 139158 [Multi-domain]  Cd Length: 262  Bit Score: 86.05  E-value: 5.56e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474   8 AMGAASQTLNQQaVTASNLANASTPGF---RAQLNALRAVPVEGLSLPTRTLVTASTPGADM-------------TPGQM 71
Cdd:PRK12692   8 ATGMSAQQLNLE-VIANNIANLNTTGFkgaRAEFTDLLYQAERQQGVPNQAGQEAVPEGAMLglgvraaairnlhRQGSL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474  72 DYTSRPLDVALQQDGWLAVQTADGSEGYTRNGNIQVSATGQL-TIQGHPVmgeAGPLTVPEGS-ELTIAADGTISALNPG 149
Cdd:PRK12692  87 AQTGNQLDLAVNGRGYFQVTSPNGEIQYTRAGSFNKNAAGQLvTMEGYAV---DPAILIPQNTtQVTINESGQVFAKIDG 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474 150 DpantVAP--VGRLKLVK-AEAKDVQRGDDGMFRLTqAAQATRGATLQADPSI-RVMSGVLEGSNVKPVEAMTDMIASAR 225
Cdd:PRK12692 164 Q----VAPqnLGQLTLANfANESGLEPLGNGLYRET-PASGAPVVGNPGDVGFgKIQQGYLEGSNVDPVKEITSLITAQR 238

                        250
                 ....*....|....*..
gi 779792474 226 RFEMQMKIISSVDENAG 242
Cdd:PRK12692 239 AFEMNSKVIQAADEMAG 255
FlgE COG1749
Flagellar hook protein FlgE [Cell motility];
7-122 5.25e-11

Flagellar hook protein FlgE [Cell motility];


Pssm-ID: 441355 [Multi-domain]  Cd Length: 414  Bit Score: 61.73  E-value: 5.25e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474   7 TAMGAASQTLNqqaVTASNLANASTPGF---RAQLNALRAVPVEGLSLPTRTL-VTASTPGADMTPGQMDYTSRPLDVAL 82
Cdd:COG1749   10 SGLNAASTALD---VIGNNIANSNTVGFkssRAEFADLVAQSLSGANPTQVGGgVRVASVAQIFTQGSLQSTGNALDLAI 86

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 779792474  83 QQDGWLAVQTADGSEGYTRNGNIQVSATGQL-TIQGHPVMG 122
Cdd:COG1749   87 SGNGFFVVSDSGGQTYYTRAGSFSLDKDGYLvNSSGLYLQG 127
flgG PRK12819
flagellar basal-body rod protein FlgG;
21-248 1.01e-09

flagellar basal-body rod protein FlgG;


Pssm-ID: 183769 [Multi-domain]  Cd Length: 257  Bit Score: 57.19  E-value: 1.01e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474  21 VTASNLANASTPGFRAQLNALRAVPVE-------GLSLPTRTLVTASTPGA---DMTPGQMDYTSRPLDVALQ----QDG 86
Cdd:PRK12819  20 VHSNNVANAQTTGFKAENMTSKVFDVQdtyrrgdGAVTNIGSVDYAVVPAAthvNLVQGNIQMTNSDTDFFLDdgpaGTS 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474  87 WLAVQTADGSEGYTRNGNIQVSATGQL-TIQGHPVMGEAGP-LTVPEGSELTIAADGTISAlnpgdpANTVAPVGRL--K 162
Cdd:PRK12819 100 SFFVTSKNGETFLTRDGSFTLNSDRYLqTASGAFVMGENNErIRIPEGAKVAVQADGTLYD------AVTQNNIARLqtK 173

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474 163 LVKAEAKD--VQRGDDgmfRLTQAAQATrgATLQADPSIrVMSGVLEGSNVKPVEAMTDMIASARRFEMQMKIISSVDEN 240
Cdd:PRK12819 174 TVSAEQNDrlVQRENK---SFTLAEGNI--ANLPNGQGI-VKNGMLENSNVDMTKEMADLMTDQRMIQASQRVMTSFDKI 247


                 ....*....
gi 779792474 241 AGK-ANQLL 248
Cdd:PRK12819 248 YEKeANEIL 256
flgE PRK05682
flagellar hook protein FlgE; Validated
 7-129 5.41e-09

flagellar hook protein FlgE; Validated


Pssm-ID: 235557 [Multi-domain]  Cd Length: 407  Bit Score: 56.00  E-value: 5.41e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474   7 TAMGAASQTLNqqaVTASNLANASTPGF---RAQ-----LNALRAVPVE-GLSlptrtlVTASTPGADMTPGQMDYTSRP 77
Cdd:PRK05682   8 SGLNAASNRLD---VIGNNIANANTTGFkssRAEfadlyANSAGTNPTQvGSG------VKVAGVAQQFSQGSITSTGNS 78

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 779792474  78 LDVALQQDGWLAVqTADGSEGYTRNGNIQVSATGQLT------IQGHPVMGEAGPLTV 129
Cdd:PRK05682  79 LDLAISGNGFFVV-SNGGNGFYTRAGAFKLDKNGYLVnaagyyLQGYPADADGGTPPT 135
flgE PRK06803
flagellar basal body protein FlaE;
7-120 1.50e-07

flagellar basal body protein FlaE;


Pssm-ID: 235862 [Multi-domain]  Cd Length: 402  Bit Score: 51.70  E-value: 1.50e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 779792474   7 TAMGAASQTLNqqaVTASNLANASTPGFRAQLNALRAVPVEGLSLPTRTLVTASTPGADmtpGQMDYTSRPLDVALQQDG 86
Cdd:PRK06803   8 SGLNATTQQLN---TISNNIANSSTKGFKGSRTEFSSIYNGGQPGGVEVSSVSQNFSKD---GSLTYTGRGLDLAISGGG 81

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 779792474  87 WLAVQTADGSEGYTRNGNIQVSATGQLT------IQGHPV 120
Cdd:PRK06803  82 FFVLKESDGDTAYTRAGMFRSDVDGYLTdpqgmkLQGYPV 121
Flg_bb_rod pfam00460
Flagella basal body rod protein;
5-34 9.31e-06

Flagella basal body rod protein;


Pssm-ID: 459821 [Multi-domain]  Cd Length: 30  Bit Score: 41.40  E-value: 9.31e-06
                          10        20        30
                  ....*....|....*....|....*....|
gi 779792474    5 IYTAMGAASQTLNQQAVTASNLANASTPGF 34
Cdd:pfam00460   1 LYTAVSALNAQQIRLDVIANNIANANTPGY 30
FlgB COG1815
Flagellar basal body rod protein FlgB [Cell motility];
1-37 1.65e-04

Flagellar basal body rod protein FlgB [Cell motility];


Pssm-ID: 441420  Cd Length: 135  Bit Score: 40.66  E-value: 1.65e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 779792474   1 MDHAIYTAMGAASQTLN----QQAVTASNLANASTPGFRAQ 37
Cdd:COG1815    1 MSILFDKTFGLLEKALDlrslRQEVIASNIANADTPGYKAR 41
flgB PRK12627
FlgB family protein;
7-37 7.81e-03

FlgB family protein;


Pssm-ID: 237152 [Multi-domain]  Cd Length: 128  Bit Score: 35.48  E-value: 7.81e-03
                         10        20        30
                 ....*....|....*....|....*....|.
gi 779792474   7 TAMGAASQTLNQQAVTASNLANASTPGFRAQ 37
Cdd:PRK12627  10 MASAMARHAGERQAVVARNVANADTPGYRAR 40
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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