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Conserved domains on  [gi|780219639|ref|WP_045523761|]
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MULTISPECIES: lipid-A-disaccharide synthase N-terminal domain-containing protein [Aeromonas]

Protein Classification

lipid-A-disaccharide synthase N-terminal domain-containing protein( domain architecture ID 10008158)

lipid-A-disaccharide synthase N-terminal domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
LABN COG3952
Uncharacterized N-terminal domain of lipid-A-disaccharide synthase [General function ...
 10-103 1.51e-33

Uncharacterized N-terminal domain of lipid-A-disaccharide synthase [General function prediction only];


:

Pssm-ID: 443152 [Multi-domain]  Cd Length: 105  Bit Score: 112.33  E-value: 1.51e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 780219639  10 DWLDWTGVHVTGWKLIGYTGALMFGGRWLVQFLASRRAGRPVIPRLFWYMSVLGSLMTLSYFTFspKQDSVGVLQNLFPT 89
Cdd:COG3952    8 QILFVNEAIPLWWLLLGFVGQALFTLRFVVQWIYSERAKRSVLPVGFWYLSLLGSLLLLIYAIF--RKDPVFILGQSFGL 85

                         90
                 ....*....|....
gi 780219639  90 FTALYSLYLDIQHR 103
Cdd:COG3952   86 FIYIRNLYLIRKEK 99
 
Name Accession Description Interval E-value
LABN COG3952
Uncharacterized N-terminal domain of lipid-A-disaccharide synthase [General function ...
 10-103 1.51e-33

Uncharacterized N-terminal domain of lipid-A-disaccharide synthase [General function prediction only];


Pssm-ID: 443152 [Multi-domain]  Cd Length: 105  Bit Score: 112.33  E-value: 1.51e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 780219639  10 DWLDWTGVHVTGWKLIGYTGALMFGGRWLVQFLASRRAGRPVIPRLFWYMSVLGSLMTLSYFTFspKQDSVGVLQNLFPT 89
Cdd:COG3952    8 QILFVNEAIPLWWLLLGFVGQALFTLRFVVQWIYSERAKRSVLPVGFWYLSLLGSLLLLIYAIF--RKDPVFILGQSFGL 85

                         90
                 ....*....|....
gi 780219639  90 FTALYSLYLDIQHR 103
Cdd:COG3952   86 FIYIRNLYLIRKEK 99
LAB_N pfam07578
Lipid A Biosynthesis N-terminal domain; This family is found at the N-terminus of a group of ...
 25-94 8.96e-20

Lipid A Biosynthesis N-terminal domain; This family is found at the N-terminus of a group of Chlamydial Lipid A biosynthesis proteins. It is also found by itself in a family of proteins of unknown function.


Pssm-ID: 429547 [Multi-domain]  Cd Length: 68  Bit Score: 76.40  E-value: 8.96e-20
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 780219639   25 IGYTGALMFGGRWLVQFLASRRAGRPVIPRLFWYMSVLGSLMTLSYFTFspKQDSVGVLQNLFPTFTALY 94
Cdd:pfam07578   1 LGFLGQLLFTLRFVVQWIYSEKAKKSVLPLAFWYLSLLGSLLLLIYAIL--RQDPVIILGQSFGLVIYIR 68
lpxB PRK01021
lipid-A-disaccharide synthase; Reviewed
 22-97 3.83e-05

lipid-A-disaccharide synthase; Reviewed


Pssm-ID: 167141 [Multi-domain]  Cd Length: 608  Bit Score: 41.32  E-value: 3.83e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 780219639  22 WKLIGYTGALMFGGRWLVQFLASRRAGRPVIPRLFWYMSVLGSLMTLSYFTFSpkQDSVGVLQ---NLFPTFTALYSLY 97
Cdd:PRK01021 140 WHLIGCIGLTIFSLRFFIQWFYLEYNNQSALPALFWKASLLGGSLALLYFIRT--GDPVNILCygcGLFPSLANLRIAY 216
 
Name Accession Description Interval E-value
LABN COG3952
Uncharacterized N-terminal domain of lipid-A-disaccharide synthase [General function ...
 10-103 1.51e-33

Uncharacterized N-terminal domain of lipid-A-disaccharide synthase [General function prediction only];


Pssm-ID: 443152 [Multi-domain]  Cd Length: 105  Bit Score: 112.33  E-value: 1.51e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 780219639  10 DWLDWTGVHVTGWKLIGYTGALMFGGRWLVQFLASRRAGRPVIPRLFWYMSVLGSLMTLSYFTFspKQDSVGVLQNLFPT 89
Cdd:COG3952    8 QILFVNEAIPLWWLLLGFVGQALFTLRFVVQWIYSERAKRSVLPVGFWYLSLLGSLLLLIYAIF--RKDPVFILGQSFGL 85

                         90
                 ....*....|....
gi 780219639  90 FTALYSLYLDIQHR 103
Cdd:COG3952   86 FIYIRNLYLIRKEK 99
LAB_N pfam07578
Lipid A Biosynthesis N-terminal domain; This family is found at the N-terminus of a group of ...
 25-94 8.96e-20

Lipid A Biosynthesis N-terminal domain; This family is found at the N-terminus of a group of Chlamydial Lipid A biosynthesis proteins. It is also found by itself in a family of proteins of unknown function.


Pssm-ID: 429547 [Multi-domain]  Cd Length: 68  Bit Score: 76.40  E-value: 8.96e-20
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 780219639   25 IGYTGALMFGGRWLVQFLASRRAGRPVIPRLFWYMSVLGSLMTLSYFTFspKQDSVGVLQNLFPTFTALY 94
Cdd:pfam07578   1 LGFLGQLLFTLRFVVQWIYSEKAKKSVLPLAFWYLSLLGSLLLLIYAIL--RQDPVIILGQSFGLVIYIR 68
lpxB PRK01021
lipid-A-disaccharide synthase; Reviewed
 22-97 3.83e-05

lipid-A-disaccharide synthase; Reviewed


Pssm-ID: 167141 [Multi-domain]  Cd Length: 608  Bit Score: 41.32  E-value: 3.83e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 780219639  22 WKLIGYTGALMFGGRWLVQFLASRRAGRPVIPRLFWYMSVLGSLMTLSYFTFSpkQDSVGVLQ---NLFPTFTALYSLY 97
Cdd:PRK01021 140 WHLIGCIGLTIFSLRFFIQWFYLEYNNQSALPALFWKASLLGGSLALLYFIRT--GDPVNILCygcGLFPSLANLRIAY 216
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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