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Conserved domains on  [gi|808046082|ref|WP_046208063|]
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MULTISPECIES: hypothetical protein [Staphylococcus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
UPF0738 pfam19785
Family of unknown function (UPF0738); This family of proteins is functionally uncharacterized. ...
 3-112 3.41e-39

Family of unknown function (UPF0738); This family of proteins is functionally uncharacterized. This family of proteins is found in Firmicute bacteria. Proteins in this family are approximately 120 amino acids in length.


:

Pssm-ID: 437617  Cd Length: 117  Bit Score: 126.85  E-value: 3.41e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808046082    3 IYVNEIKVTEDSLKCYTEQST--EGLQEAGQMLVDSDNYSFAYILDDGQSYSYLIFVQETWSMLHENKNKKIIV-----N 75
Cdd:pfam19785   1 ITVTEAEIEENELILYLEEEEplSGLKPAGQMLVDSDNLAFIYLLEDEEEYVYVRFPEEVWPDLKEALEEELPVylqlgE 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 808046082   76 DHLELKQFDREFNYILENIQGNSNYGKEFVSVVEDTF 112
Cdd:pfam19785  81 ETLELTNFHEELEYLIENIEGNSNYGEEMVKAVEEAF 117
 
Name Accession Description Interval E-value
UPF0738 pfam19785
Family of unknown function (UPF0738); This family of proteins is functionally uncharacterized. ...
 3-112 3.41e-39

Family of unknown function (UPF0738); This family of proteins is functionally uncharacterized. This family of proteins is found in Firmicute bacteria. Proteins in this family are approximately 120 amino acids in length.


Pssm-ID: 437617  Cd Length: 117  Bit Score: 126.85  E-value: 3.41e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808046082    3 IYVNEIKVTEDSLKCYTEQST--EGLQEAGQMLVDSDNYSFAYILDDGQSYSYLIFVQETWSMLHENKNKKIIV-----N 75
Cdd:pfam19785   1 ITVTEAEIEENELILYLEEEEplSGLKPAGQMLVDSDNLAFIYLLEDEEEYVYVRFPEEVWPDLKEALEEELPVylqlgE 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 808046082   76 DHLELKQFDREFNYILENIQGNSNYGKEFVSVVEDTF 112
Cdd:pfam19785  81 ETLELTNFHEELEYLIENIEGNSNYGEEMVKAVEEAF 117
 
Name Accession Description Interval E-value
UPF0738 pfam19785
Family of unknown function (UPF0738); This family of proteins is functionally uncharacterized. ...
 3-112 3.41e-39

Family of unknown function (UPF0738); This family of proteins is functionally uncharacterized. This family of proteins is found in Firmicute bacteria. Proteins in this family are approximately 120 amino acids in length.


Pssm-ID: 437617  Cd Length: 117  Bit Score: 126.85  E-value: 3.41e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808046082    3 IYVNEIKVTEDSLKCYTEQST--EGLQEAGQMLVDSDNYSFAYILDDGQSYSYLIFVQETWSMLHENKNKKIIV-----N 75
Cdd:pfam19785   1 ITVTEAEIEENELILYLEEEEplSGLKPAGQMLVDSDNLAFIYLLEDEEEYVYVRFPEEVWPDLKEALEEELPVylqlgE 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 808046082   76 DHLELKQFDREFNYILENIQGNSNYGKEFVSVVEDTF 112
Cdd:pfam19785  81 ETLELTNFHEELEYLIENIEGNSNYGEEMVKAVEEAF 117
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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