|
Name |
Accession |
Description |
Interval |
E-value |
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
1-507 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 610.67 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 1 MILPWLILIPFIGGFLCWLGERFGSTLPRWIALLTMSLLLGIGLWLWGTGDYTLapapgaePAWALEYKVEWIKRFGISI 80
Cdd:PRK05846 4 PLLSLLIFLPLIGGLLVLLTERFGARLARWIALIGTLLTLLLSLVLWIGFDSSN-------AGFQFVEKHPWIPRFGISY 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 81 HLALDGLSLLMILLTGLLGVLSVLCSWKEIQRHVGFFHLNLMWILGGVVGVFLALDLFLFFFFWEMMLVPMYFLIALWGh 160
Cdd:PRK05846 77 HLGVDGISLLLVVLTALLTPLAVLASWEEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG- 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 161 ssadgKKTRIYAATKFFIFTQASGLIMLVAILGLVLVNYNTTGvlTFNYSDLLKAELPAGVEYLLMLGFFIAFAVKLPVV 240
Cdd:PRK05846 156 -----GKNRIYAATKFFLYTLLGSLLMLVAIIYLVVVYYNATG--TFDIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMF 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 241 PFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTLGLIGIFYGAFLAFAQTDIKRLIAFS 320
Cdd:PRK05846 229 PLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYS 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 321 SVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWHRIAYLPAISLFFAAASLGL 400
Cdd:PRK05846 309 SISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGL 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 401 PGTGNFVGEFLILIGSFASVPWITVIATTGLVFGSVYSLIMIHRAYFGPSKSDTV-LAGMDGRELIMVLGLAVLLIVLGV 479
Cdd:PRK05846 389 PGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAkLKDLNGRELLILLPLVALLLLLGV 468
|
490 500
....*....|....*....|....*...
gi 820875160 480 YPQPFLDTSAATMSGVQQWLGSAFTQLA 507
Cdd:PRK05846 469 YPKPLLDVIHPSVENLLQWVAPSVATTR 496
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
1-500 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 543.91 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 1 MILPWLILIPFIGGFLCWLGERFGSTLPRWIALLTMSLLLGIGLWLWGTGDYtlapapgAEPAWALEYKVEWIKRFGISI 80
Cdd:COG1008 4 PLLSLLILLPLLGALLLLLLPRRNARLARWVALAVSLLTLLLSLYLLAGFDP-------GTGGFQFVESYPWIPSLGISY 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 81 HLALDGLSLLMILLTGLLGVLSVLCSWKEIQRHVGFFHLNLMWILGGVVGVFLALDLFLFFFFWEMMLVPMYFLIALWGH 160
Cdd:COG1008 77 HLGVDGISLPLVLLTALLTPLAILASWNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 161 ssadgkKTRIYAATKFFIFTQASGLIMLVAILGLvlvnYNTTGVLTFNYSDLLKAELPAGVEYLLMLGFFIAFAVKLPVV 240
Cdd:COG1008 157 ------ERRIYAAIKFFLYTLAGSLLMLVAILAL----YFLAGALTFDIAELAAAPLPLTAQLLLFLAFFIAFAVKVPMF 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 241 PFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTLGLIGIFYGAFLAFAQTDIKRLIAFS 320
Cdd:COG1008 227 PFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYS 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 321 SVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWHRIAYLPAISLFFAAASLGL 400
Cdd:COG1008 307 SVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGL 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 401 PGTGNFVGEFLILIGSFASVPWITVIATTGLVFGSVYSLIMIHRAYFGPSKSDTV-LAGMDGRELIMVLGLAVLLIVLGV 479
Cdd:COG1008 387 PGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAeLPDLNPRELAVLAPLAALILLLGL 466
|
490 500
....*....|....*....|.
gi 820875160 480 YPQPFLDTSAATMSGVQQWLG 500
Cdd:COG1008 467 YPQPLLDLIEPSVEALLARVG 487
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
3-499 |
1.20e-168 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 485.21 E-value: 1.20e-168
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 3 LPWLILIPFIGGFLCWLGERFGSTLPRWIALLTMSLLLGIGLWLWGTGDYTlapapgaEPAWALEYKVEWIKRFGISIHL 82
Cdd:TIGR01972 1 LSLLIFLPLIGALLILLLPSNKDGKARWIALVVALATLLLSLLLLFQFDPT-------GSGFQFTEDIPWIPALGISYHL 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 83 ALDGLSLLMILLTGLLGVLSVLCSWKEIQRHVGFFHLNLMWILGGVVGVFLALDLFLFFFFWEMMLVPMYFLIALWGhss 162
Cdd:TIGR01972 74 GVDGISLLLVLLTALLTLLAILASWESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWG--- 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 163 adgKKTRIYAATKFFIFTQASGLIMLVAILGLVLVNYnttgvLTFNYSDLLKAELPAGVEYLLMLGFFIAFAVKLPVVPF 242
Cdd:TIGR01972 151 ---GPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGG-----GTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPL 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 243 HSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTLGLIGIFYGAFLAFAQTDIKRLIAFSSV 322
Cdd:TIGR01972 223 HTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSI 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 323 SHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWHRIAYLPAISLFFAAASLGLPG 402
Cdd:TIGR01972 303 SHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPG 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 403 TGNFVGEFLILIGSFASVPWITVIATTGLVFGSVYSLIMIHRAYFGPSKSDTV--LAGMDGRELIMVLGLAVLLIVLGVY 480
Cdd:TIGR01972 383 TSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVaeFPDLNGREIAVLAPLVVLILFLGLY 462
|
490
....*....|....*....
gi 820875160 481 PQPFLDTSAATMSGVQQWL 499
Cdd:TIGR01972 463 PNPLLDLTEPSVNNLLSQV 481
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
66-510 |
6.75e-100 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 310.04 E-value: 6.75e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 66 LEYKVEWIKRFGISIHLALDGLSLLMILLTGLLGVLSVLCSWKEIQRHVGFFHLNLMwILGGVVGVFLALDLFLFFFFWE 145
Cdd:PRK12561 39 LVERYAWLPQIGLEWSLGVDGLSMPLVLLSGLITTLSIFASWKVTRKPRLFYFLMLV-LYSAQIGVFLAQDLLLFFLMWE 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 146 MMLVPMYFLIALWGhssadGKKtRIYAATKFFIFTQASGLIMLVAILGLVLvnynTTGVLTFNYSDLLKAELPAGVEYLL 225
Cdd:PRK12561 118 LELVPVYLLISIWG-----GQK-RLYAATKFILYTALASIFILVAGLALAL----SGDTFTFDLAELGAKSYPLALELLL 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 226 MLGFFIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTLGLIGIFYGAF 305
Cdd:PRK12561 188 YAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPALAILGVVNIIYGAL 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 306 LAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWHRIAY 385
Cdd:PRK12561 268 NAFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPK 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 386 LPAISLFFAAASLGLPGTGNFVGEFLILIG---------SFASVpwITVIATTGLVFGSVYSLIMIHRAYFGPSK----S 452
Cdd:PRK12561 348 TFALFTASSMASLALPGMSGFVSELTVFLGitssdvyssTFRTI--TILLAAVGLILTPIYLLSMLRRVFYGPRSellpA 425
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 820875160 453 DTVLAGMDGRELIMVLGLAVLLIVLGVYPQPFLDTSAATMSGVQQWLGSAFTQLASAR 510
Cdd:PRK12561 426 LAVVEDAKPRELFIALSLLVPIIGIGFYPKLATQLYDVKTVALAAQLRQALPVIAQQP 483
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
4-508 |
5.08e-83 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 266.96 E-value: 5.08e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 4 PWL---ILIPFIGGFLCWL--GERFGSTLpRWIALLTMSLLLGIGLWLWGTGdYTLApapgaEPAWALEYKVEWIKRFGI 78
Cdd:PRK02546 7 PWLttiILFPIVAALLIPFipDKGDGKTV-RWYALIVGLIDFLITVYAFYTG-YDFS-----NPGLQLVESYSWLPQLGL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 79 SIHLALDGLSLLMILLTGLLGVLSVLCSWKEIQRHVGFFHLNLMwILGGVVGVFLALDLFLFFFFWEMMLVPMYFLIALW 158
Cdd:PRK02546 80 TWSVGADGLSMPLILLTGFITTLAVLAAWPVTFKPKLFYFLMLA-MYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIW 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 159 GhssadGKKtRIYAATKFFIFTQASGLIMLVAILGLVLVnyntTGVLTFNYSDLLKAELPAGVEYLLMLGFFIAFAVKLP 238
Cdd:PRK02546 159 G-----GKK-RQYAATKFILYTAGSSLFILLAALAMAFY----GDTPTFDMTALAAKDFGLGFQLLCYAGLLIAYGVKLP 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 239 VVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTLGLIGIFYGAFLAFAQTDIKRLIA 318
Cdd:PRK02546 229 IVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIA 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 319 FSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWHRIAYLPAISLFFAAASL 398
Cdd:PRK02546 309 YSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASL 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 399 GLPGTGNFVGEFLILIGsFA-----SVPWITVI---ATTGLVFGSVYSLIMIHRAYFGPSK----SDTVLAGMDGRELIM 466
Cdd:PRK02546 389 ALPGMSGFVAELMVFVG-FAtsdayTLPFRVVVvflAAVGVILTPIYLLSMLREIFFGPENkelvSHEKLVDAEPREVFI 467
|
490 500 510 520
....*....|....*....|....*....|....*....|..
gi 820875160 467 VLGLAVLLIVLGVYPQPFLDTSAATMSGVQQWLGSAFTQLAS 508
Cdd:PRK02546 468 IACLLVPIIGIGLYPKLVTQSYDATTNQLVARDRDSVPSLAQ 509
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
70-487 |
6.33e-83 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 265.39 E-value: 6.33e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 70 VEWIKRFGISIH-----LALDGLSLLMILLTGLLGVLSVLCSWKEIQRHVGFFHLNLMWILGGVVGVFLALDLFLFFFFW 144
Cdd:MTH00204 62 IEWIISPTLNFQwgplvFAVDGVSLFFILLTTLLIPICILISWKSIKFLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILF 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 145 EMMLVPMYFLIALWGHssadgKKTRIYAATKFFIFTQASGLIMLVAILGLvlvnYNTTGvlTFNYSDLLKAELPAGVEYL 224
Cdd:MTH00204 142 EGILIPMFLLIGIWGS-----REEKVRASYYFFFYTFAGSVFMLLGIFQL----YSITG--TTDYQILLNIKLPLSIQKW 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 225 LMLGFFIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTLGLIGIFYGA 304
Cdd:MTH00204 211 LLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMLSVIAVIYGS 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 305 FLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWHRIA 384
Cdd:MTH00204 291 LTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMP 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 385 YLPAISLFFAAASLGLPGTGNFVGEFLILIGSFASVPWITVIATTGLVFGSVYSLIMIHRAYFGPSKSDTVLA-GMDGRE 463
Cdd:MTH00204 371 LFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSrDLNRRE 450
|
410 420
....*....|....*....|....
gi 820875160 464 LIMVLGLAVLLIVLGVYPQPFLDT 487
Cdd:MTH00204 451 LLAILPLIIAIFLLGIVPFIIIDL 474
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
69-487 |
2.13e-81 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 261.14 E-value: 2.13e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 69 KVEWI----KRFGiSIHLALDGLSLLMILLTGLLGVLSVLCSWKEIQRHVGFFHLNLMWILGGVVGVFLALDLFLFFFFW 144
Cdd:MTH00217 60 KFEWIpgiePVFG-PVVFAVDGISIFFLILTALLTPICILISWNSIKFLIKEFLLCLLVIEILLMGVFTILDLVGFYILF 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 145 EMMLVPMYFLIALWGhssadGKKTRIYAATKFFIFTQASGLIMLVAILGLvlvnYNTTGvlTFNYSDLLKAELPAGVEYL 224
Cdd:MTH00217 139 EGILIPMFLIIGIWG-----SREEKVQASYYFFFYTFIGSVFMLLGIFTL----YSYAG--TTDYQALCCLKIEKELQYF 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 225 LMLGFFIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTLGLIGIFYGA 304
Cdd:MTH00217 208 IFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQTLSLLAIIYGS 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 305 FLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWHRIA 384
Cdd:MTH00217 288 LTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMP 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 385 YLPAISLFFAAASLGLPGTGNFVGEFLILIGSFASVPWITVIATTGLVFGSVYSLIMIHRAYFG-PSKSDTVLAGMDGRE 463
Cdd:MTH00217 368 LFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLYNRVCFGaPSKYLYFSRDLNRRE 447
|
410 420
....*....|....*....|....
gi 820875160 464 LIMVLGLAVLLIVLGVYPQPFLDT 487
Cdd:MTH00217 448 FYVLLPLVFLIYLMGIFPFIIIDV 471
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
66-481 |
8.66e-80 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 257.57 E-value: 8.66e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 66 LEYKVEWIKRFGISIHLALDGLSLLMILLTGLLGVLSVLCSWKeIQRHVGFFHLNLMWILGGVVGVFLALDLFLFFFFWE 145
Cdd:CHL00011 64 LKEDYKWINFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWP-VTRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWE 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 146 MMLVPMYFLIALWGhssadGKKtRIYAATKFFIFTQASGLIMLVAILGLVLVNYNttgVLTFNYSDLLKAELPAGVEYLL 225
Cdd:CHL00011 143 LELIPVYLLLSMWG-----GKK-RLYSATKFILYTAGGSIFLLIGVLGMGLYGSN---EPTLNFETLANQSYPVALEILF 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 226 MLGFFIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTLGLIGIFYGAF 305
Cdd:CHL00011 214 YIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVGAIQIIYAAS 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 306 LAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGlwhrIA- 384
Cdd:CHL00011 294 TSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGG----IAi 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 385 YLPAI-SLF--FAAASLGLPGTGNFVGEFLILIG-------SFASVPWITVIATTGLVFGSVYSLIMIHRAYFG---PSK 451
Cdd:CHL00011 370 PMPKIfTMFssFSMASLALPGMSGFVAELIVFFGiitsqkyLLMPKILITFVMAIGMILTPIYLLSMLRQMFYGyklFNV 449
|
410 420 430
....*....|....*....|....*....|
gi 820875160 452 SDTVLAGMDGRELIMVLGLAVLLIVLGVYP 481
Cdd:CHL00011 450 PNSYFFDSGPRELFISICILLPVIGIGIYP 479
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
2-482 |
1.27e-79 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 257.32 E-value: 1.27e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 2 ILPWLILIPFIGGFL--CWLGERFGStLPRWIALLTMSLLLGIGLWLWGTGDytlapapGAEPAWALEYKVEWIKRFGIS 79
Cdd:PRK06473 1 MLSALIWIPLLGAILigFWPSGINGK-LARSVALVIASVLLLLSLVLAFQFD-------PGNPNQQFTEFIPWIDSLGLS 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 80 IHLALDGLSLLMILLTGLLGVLSVLCSWKEIQRHVGFFHLnLMWILGGVVGVFLALDLFLFFFFWEMMLVPMYFLIALWG 159
Cdd:PRK06473 73 YHLGVDGLSLPLLVLNSLLTLIAIYSSDESIQRPRFYYSL-LLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWG 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 160 HSSadgkktRIYAATKFFIFTQASGLIMLVAILGLVLVnyntTGVLTFNYSDLLKAELPAGVEYLLMLGFFIAFAVKLPV 239
Cdd:PRK06473 152 GQR------RGYAATKFLLYTAISGILILVSFLGLVWL----SGASSFDYEPLRSHTLPLSTQLLLLAPILVGFGIKIPL 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 240 VPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTLGLIGIFYGAFLAFAQTDIKRLIAF 319
Cdd:PRK06473 222 VPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAY 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 320 SSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWHRIAYLPAI-SLFFAA--A 396
Cdd:PRK06473 302 SSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLNPERGLPITgSLMILGvmA 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 397 SLGLPGTGNFVGEFLILIGSFASVPWITVIATTGLVFGSVYSLIMIHRAYFGP-SKSDTVLAGMDGRELIMVLGLAVLLI 475
Cdd:PRK06473 382 SAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRlTAELSNLPRVLWSERLPALVLAVLIV 461
|
....*..
gi 820875160 476 VLGVYPQ 482
Cdd:PRK06473 462 VLGIQPS 468
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
60-481 |
1.30e-73 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 241.54 E-value: 1.30e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 60 AEPAWALEYKVEWIKRFGISIHLALDGLSLLMILLTGLLGVLSVLCSWKEIQRHVGFFHLNLMwILGGVVGVFLALDLFL 139
Cdd:PRK07363 53 SDPGMQFQEYLPWNEPLGLSYSLGVDGLSLPLLVLNSLLTWIAIYSIGENTERPRLYYSLILL-INGGIAGALLAQNLLL 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 140 FFFFWEMMLVPMYFLIALWGhssadGKKtRIYAATKFFIFTQASGLIMLVAILGLVLVNynttGVLTFNYSDLLKAELPA 219
Cdd:PRK07363 132 FFLFYELELIPFYLLIAIWG-----GEK-RGYASIKFLIYTAVSGLLVLAAFLGIVWLS----GSTSFDYDAISTQNLSL 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 220 GVEYLLMLGFFIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTLGLIG 299
Cdd:PRK07363 202 NTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGLAIIGTIS 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 300 IFYGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGL 379
Cdd:PRK07363 282 VIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGL 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 380 WHRIAYLPAISLFF---AAASLGLPGTGNFVGEFLILIGSFASVPWITV--IATTGLVfgSVYSLIMIHRAYFGPSKSDT 454
Cdd:PRK07363 362 MNPIRGLPLTSALLvlaGMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLlcIVASGLT--AVYFVILLNRTCFGRLDNKL 439
|
410 420 430
....*....|....*....|....*....|..
gi 820875160 455 -----VLAGmdgrELIMVLGLAVLLIVLGVYP 481
Cdd:PRK07363 440 ayypkVLWS----EKIPALILTALILFLGVQP 467
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
2-446 |
3.43e-63 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 211.93 E-value: 3.43e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 2 ILPWLILIPFIGGFLCWLGERFgSTLPRWIALLTMSLLLGIGLWLWGT--GDYTLAPAPGAEPAwaleykvewikrfGIS 79
Cdd:COG0651 4 LLILPVLLPLLAAALLLLLGRR-RRLQRALSLLASLALLALALALLLQvlAGGPLVYALGGWPA-------------PFG 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 80 IHLALDGLSLLMILLTGLLGVLSVL--CSWKEIQRHVGFFHLNLMWILGGVVGVFLALDLFLFFFFWEMMLVPMYFLIAL 157
Cdd:COG0651 70 IVLVADRLSALFLLLTALVALAVLLysIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVAL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 158 wghssaDGKKTRIYAATKFFIFTQASGLIMLVAILGLvlvnYNTTGvlTFNYSDLLK--AELPAGVEYLLMLGFFIAFAV 235
Cdd:COG0651 150 ------GGTKEALRAGLKYLILNLVGSALFLLGVGLL----YGATG--TLNMADLAArlAELDPGLLLAAFALLLVGFGI 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 236 KLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFA-PIAMTLGLIGIFYGAFLAFAQTDIK 314
Cdd:COG0651 218 KAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGADPALFLgTLLLVLGLLTMLVGALGALAQRDLK 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 315 RLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWHRIAYLpAISLFFA 394
Cdd:COG0651 298 RLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLT-AAAFLIG 376
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 820875160 395 AASL-GLPGTGNFVGEFLILIGSFASVPWITVIAttgLVFGSVYSLIMIHRAY 446
Cdd:COG0651 377 ALALaGLPPLSGFVSKWLLLQAALEAGAWLLAAV---LLLSSLLTLAYFVRIF 426
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
82-481 |
4.17e-61 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 208.62 E-value: 4.17e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 82 LALDGLSLLMILLTGLLGVLSVLCSWKEIQRHVGFFHLNLMWILGGVVGVFLALDLFLFFFFWEMMLVPMYFLIALWGhs 161
Cdd:MTH00226 98 FAVDGISIYFIILTGFIVPCSILISWHSVKYLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWG-- 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 162 sadGKKTRIYAATKFFIFTQASGLIMLVAILGLVLVnYNTTGVLTFNYSDLLkaeLPAGVEYLLMLGFFIAFAVKLPVVP 241
Cdd:MTH00226 176 ---SREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNI-HGTTDYLTLASCSHV---VSEQTQKWIFLGIFLAMAVKIPIFP 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 242 FHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTLGLIGIFYGAFLAFAQTDIKRLIAFSS 321
Cdd:MTH00226 249 FHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSS 328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 322 VSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWHRIAYLPAISLFFAAASLGLP 401
Cdd:MTH00226 329 VAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVP 408
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 402 GTGNFVGEFLILIGSFASVPWITVIATTGLVFGSVYSLIMIHRAYFG-PSKSDTVLAGMDGRELIMVLGLAVLLIVLGVY 480
Cdd:MTH00226 409 PSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGaPGNLITFARDVNRREFYITASMVFFAFLIGIY 488
|
.
gi 820875160 481 P 481
Cdd:MTH00226 489 P 489
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
144-432 |
5.67e-57 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 191.37 E-value: 5.67e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 144 WEMMLVPMYFLIALWGhssadGKKTRIYAATKFFIFTQASGLIMLVAILGLvlvnYNTTGVLTFNYSDLLKAELPAGVEY 223
Cdd:pfam00361 11 WEAVLLPSYLLIGYWG-----KSPRSSEAGMKYFLLTLLGSSILLFGISLM----YNYTGTLSFDELSKALTGGLNSSGL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 224 LLMLGF-FIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFaLPLFPNASAEFAPIAMTLGLIGIFY 302
Cdd:pfam00361 82 LLLFLLiLVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRR-SLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 303 GAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQ-LYERLHTRDMRQMGGLWH 381
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSvIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 820875160 382 RIAYLPAISLFFAAASLGLPGTGNFVGEFLILIGSFASVPWITVIATTGLV 432
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
145-440 |
1.00e-51 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 182.48 E-value: 1.00e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 145 EMMLVPMYFLIALWGhssadGKKTRIYAATKFFIFTQASGLIMLVAILGLvlvnYNTTGVLTFNYSDLLKAELPAgVEYL 224
Cdd:MTH00044 124 ETTLIPTLILITRWG-----AQKERIQAGLYFLFYTLFGSLPLLISLIAI----YSSSSSLSIPLSELNWLTSLS-SNSS 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 225 LMLGFF--IAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTLGLIGIFY 302
Cdd:MTH00044 194 SIWWIFciLAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLINLFSLPSANNISFILIVFCCWGALI 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 303 GAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWHR 382
Cdd:MTH00044 274 TSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLI 353
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 820875160 383 IAYLPAISLFFAAASLGLPGTGNFVGEFLILIGSFASVPWITVIATTGLVFGSVYSLI 440
Cdd:MTH00044 354 TPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLATVFGAIYSLL 411
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
145-441 |
1.29e-51 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 181.68 E-value: 1.29e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 145 EMMLVPMYFLIALWGHSsadgkKTRIYAATKFFIFTQASGLIMLVAILGLvlvnynTTGVLTFNYSDLLKAELPAGVEYL 224
Cdd:MTH00206 122 EASLIPTLLLITRWGNQ-----KERLNAGYYFLFYTLIGSLPLLIALLFL------QNSLGSLSLYILYFSKLTTWNNNL 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 225 LMLGFFIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIaMTLGLIGIFYGA 304
Cdd:MTH00206 191 WWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGPSTKLSSYFF-IILGLWGSIMTS 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 305 FLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWHRIA 384
Cdd:MTH00206 270 SICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLANLLYERSHTRTILGNRGLQMILP 349
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 820875160 385 YLPAISLFFAAASLGLPGTGNFVGEFLILIGSFASVPWITVIATTGLVFGSVYSLIM 441
Cdd:MTH00206 350 LLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYM 406
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
145-441 |
7.55e-50 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 176.18 E-value: 7.55e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 145 EMMLVPMYFLIALWGhssadGKKTRIYAATKFFIFTQASGLIMLVAILgLVLVNYNTTGVLTFNYsdLLKAELPAGveyL 224
Cdd:MTH00150 85 EASLIPTLLLILGWG-----YQPERLQAGMYMMLYTVGASLPLLLVIL-WMSSSYGSSFMLLISS--LRKLLSSMG---L 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 225 LMLGFFIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFaLPLFPNASAEFAPIAMTLGLIGIFYGA 304
Cdd:MTH00150 154 WGLLVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRM-MMVFSLSSSSFSIFLISLSLWGGVLTS 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 305 FLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLwhrIA 384
Cdd:MTH00150 233 LICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGM---LM 309
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 385 YLPAISLF---FAAASLGLPGTGNFVGEFLILIGSFASVPWITVIATTGLVFGSVYSLIM 441
Cdd:MTH00150 310 LYPSLSLWwflFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYL 369
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
145-441 |
1.21e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 168.41 E-value: 1.21e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 145 EMMLVPMYFLIALWGHSSAdgkktRIYAATKFFIFTQASGLIMLVAILglvlVNYNTTGVLTFNYSDLLKaelpaGVEYL 224
Cdd:MTH00163 117 ESSLIPTLFLILGWGYQPE-----RLQAGIYLLFYTLFASLPLLVGIF----YLYNNSGSLSFFLLNFFG-----SLNFL 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 225 LMLGFFIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFaLPLFPNASAEFAPIAMTLGLIGIFYGA 304
Cdd:MTH00163 183 WYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRV-MSFFSKLGLKFNYIWISISLVGGVIVS 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 305 FLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLwhrIA 384
Cdd:MTH00163 262 LICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANIIYERLGSRSLLINKGL---LN 338
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 820875160 385 YLPAISLF---FAAASLGLPGTGNFVGEFLILIG--SFASVPWITVIAttGLVFGSVYSLIM 441
Cdd:MTH00163 339 FMPSMSLWwflLSSSNMAAPPSLNLLGEISLINSliSWSKLSMIFLML--LSFFSAAYSLYL 398
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
145-441 |
1.63e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 168.17 E-value: 1.63e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 145 EMMLVPMYFLIALWGHssadgKKTRIYAATKFFIFTQASGLIMLVAILGLvlvnYNTTGVLTFNYSDLLKA-ELPAGVEY 223
Cdd:MTH00068 123 EATLIPTLIIITRWGN-----QEERLNAGTYFLFYTLAGSLPLLIALLIL----QNSLGSLSLILLELMSPmQLMTYTNK 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 224 LLMLGFFIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFAlPLFPNASAEFAPIAMTLGLIGIFYG 303
Cdd:MTH00068 194 IWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGILRIS-ILLTPLSKELSYPFIILALWGVLMT 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 304 AFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLwhrI 383
Cdd:MTH00068 273 SLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERTHSRTLLLLRGA---Q 349
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 820875160 384 AYLPAISLFFAAASL---GLPGTGNFVGEFLILIGSFASVPWITVIATTGLVFGSVYSLIM 441
Cdd:MTH00068 350 TILPLMATWWLLSNLsnmALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYM 410
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-490 |
3.22e-45 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 165.44 E-value: 3.22e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 1 MILPWLILIPFIGGFLCWL-GERfgSTLPRWIALLTMSLLLGIGlwlwgtgdytLAPAPGAEPAWALEYKV-EWIKrfGI 78
Cdd:PRK08375 4 HLLPLLVAVPLLAAALIVLlPKR--RRLRWALALLVAALTFALA----------ISLLPQVLDGGVIAYVVgGWPP--GI 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 79 SIHLALDGLSLLMILLTGLLGVLSVLCSWKEIQRHVGFFHLNLMWILGGVVGVFLALDLFLFFFFWEMMLVPMYFLIALw 158
Cdd:PRK08375 70 GIELRADSLSALFLLVTSILAIAALLYAIGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAM- 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 159 ghssaDGKKTRIYAATKFFIFTQASGLIMLVAIlGLVlvnYNTTGVLTFNysdLLKAELPAGVEYLLMLGF-FIAFAVKL 237
Cdd:PRK08375 149 -----GGDRRALAAARKYLIVGLIGSTFLLIGV-GLL---YGVTGTLNMA---DLAGALAENPTVVTAFGFvLLALALKA 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 238 PVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFP---NASAEFAPIAMTLGLIGIFYGAFLAFAQTDIK 314
Cdd:PRK08375 217 AVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGgdfRFALGLGWLLAVLALLSMLVGSLAALGQDDVK 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 315 RLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWHRiayLPAISLFFA 394
Cdd:PRK08375 297 RVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRR---MPLTAAAFA 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 395 AASL---GLPGTGNFVGEFLILIGSFASVPWITVIATTGLVFGSVYSLIMI-HRAYFGPSKSDTVLAGMD--GRELIMVL 468
Cdd:PRK08375 374 VASLsliGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIwYRAFFGPPPPGSEAPKQEapLGMLAPSL 453
|
490 500
....*....|....*....|..
gi 820875160 469 GLAVLLIVLGVYPQPFLDTSAA 490
Cdd:PRK08375 454 ALALLSLLLGIYAGPLLQLADA 475
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
145-441 |
3.02e-44 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 161.90 E-value: 3.02e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 145 EMMLVPMYFLIALWGHssadgKKTRIYAATKFFIFTQASGLIMLVAILGLvlvnYNTTGVLTFNYSDLLKAELPAGVEYL 224
Cdd:MTH00124 123 EATLIPTLILITRWGN-----QPERLSAGTYFLFYTLISSLPLLIAILYL----HNQTGTLSLPMLQLTHPTLTNSWTNL 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 225 LM-LGFFIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIaMTLGLIGIFYG 303
Cdd:MTH00124 194 LLwLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPPLSNTLHYPF-LTLALWGALMT 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 304 AFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLwHRI 383
Cdd:MTH00124 273 SLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHSRTLLLTRGL-QLL 351
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 820875160 384 ayLPAISLFFAAASL---GLPGTGNFVGEFLILIGSFASVPwITVIAT-TGLVFGSVYSLIM 441
Cdd:MTH00124 352 --LPLMTTWWLLANLtnmALPPTINLMGELTIMTSLFNWSP-TTIILTgLATLITASYTLYM 410
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
145-441 |
3.85e-42 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 156.05 E-value: 3.85e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 145 EMMLVPMYFLIALWGHssadgKKTRIYAATKFFIFTQASGLIMLVAILGLVLVNyNTTGVLTFNYSDLLkaELPAGVEYL 224
Cdd:MTH00014 120 EASLIPTLFLILGWGY-----QPERLQASFYLMIYTVTASLPLLMSILLIFYTN-NSLSMLMSSMEPPS--IYLMNLWWL 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 225 LMLGffiAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFAlPLFPNASAEFAPIAMTLGLIGIFYGA 304
Cdd:MTH00014 192 ITIL---AFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRMS-SLFMHINKSLSAPFSSISLVGAVITS 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 305 FLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLwhrIA 384
Cdd:MTH00014 268 LICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSALFALANMTYETTHTRSLFLTKGL---LS 344
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 385 YLPAISLF---FAAASLGLPGTGNFVGEFLILIGSFASVPWITVIATTGLVFGSVYSLIM 441
Cdd:MTH00014 345 LFPTMTMWwflLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAYSLFL 404
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
145-441 |
2.12e-40 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 151.65 E-value: 2.12e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 145 EMMLVPMYFLIALWGHssadgKKTRIYAATKFFIFTQASGLIMLVAILGLvlvnYNTTG---VLTFNYSDLLkaELPAGV 221
Cdd:MTH00127 124 EATLIPTLIIITRWGN-----QTERLNAGTYFLFYTLAGSLPLLVALLLL----QNSTGtlsMLTLQYSQPL--QLSSWA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 222 EYLLMLGFFIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPnASAEFAPIAMTLGLIGIF 301
Cdd:MTH00127 193 DKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDP-LTKELSYPFIILALWGII 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 302 YGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWH 381
Cdd:MTH00127 272 MTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQM 351
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 382 RIAYLPAISLFFAAASLGLPGTGNFVGEFLILIGSFASVPWITVIATTGLVFGSVYSLIM 441
Cdd:MTH00127 352 ILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYM 411
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
165-487 |
1.49e-38 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 147.00 E-value: 1.49e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 165 GKKTRIYAATKFFIFTQAsGLIMlvAILGLVLVNYNTTGVLTFNYSDLLKAELPAGVEYL----LMLGF---FIAFAVKL 237
Cdd:PRK06458 152 RTRASLEAAWKYIIICSV-GVAF--ALFGTILVYANAATVMGDGEMAILWTELLKHASLLdptlMKLAFvflLIGFGTKV 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 238 PVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFA-PIAMTLGLIGIFYGAFLAFAQTDIKRL 316
Cdd:PRK06458 229 GLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSDFPgRLLLIFGLLSVLVAAFFLLRQRDIKRL 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 317 IAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLwHRIAYLPAISLFFAA- 395
Cdd:PRK06458 309 FAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGL-LKVSPLTGWGLMLGAl 387
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 396 ASLGLPGTGNFVGEFLILIGSFASVPW---ITVIATTGLVFGSVysLIMIHRAYFGPSKSDTVLAGMDGRELIMVLGLAV 472
Cdd:PRK06458 388 AIAGMPPFGVFISEFLILTAGLARGPLliaILLLLLLTLAFAAL--VRRVAGMVFGEPPEAVNRGDLGWLTTSPMFVHLV 465
|
330
....*....|....*
gi 820875160 473 LLIVLGVYPQPFLDT 487
Cdd:PRK06458 466 LVLVLGLYIPQPLVR 480
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
145-442 |
1.49e-37 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 143.49 E-value: 1.49e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 145 EMMLVPMYFLIALWGHSSAdgkktRIYAATKFFIFTQASGLIMLVAILGLvlvnYNTTGVLTFNYSDLLKAELPAGV-EY 223
Cdd:MTH00110 123 EATLIPTLIIITRWGNQTE-----RLNAGLYFLFYTLVGSLPLLVALLYI----QNNLGSLNFLLLQLWAQPLPNSWsNN 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 224 LLMLGFFIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIaMTLGLIGIFYG 303
Cdd:MTH00110 194 LLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTEFMAYPF-LMLSLWGMIMT 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 304 AFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWhri 383
Cdd:MTH00110 273 SSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQ--- 349
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 820875160 384 AYLPAISLFFAAASL---GLPGTGNFVGEFLILIGSFAsvpW--ITVIAT-TGLVFGSVYSLIMI 442
Cdd:MTH00110 350 TLLPLMATWWLLASLtnlALPPTINLIGELFVIMSSFS---WsnITIILMgLNMLITALYSLYML 411
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
144-492 |
2.62e-37 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 143.33 E-value: 2.62e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 144 WEMMLVPMYFLIALWGHSsadgkKTRIYAATKFFIFTQASGLIMLvaiLGLVLVnYNTTGvlTFNYSDLLKA-ELPAGVE 222
Cdd:COG1007 131 LELLSLSLYVLVAFRRDD-----RRSSEAALKYFLLGALSSGFLL---YGISLL-YGATG--SLNLAGIAAAlAAGGANS 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 223 YLLMLGF---FIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILlKTAAYG-LLRFALPLFPNASAEFAPIAMTLGLI 298
Cdd:COG1007 200 PLLLLGLvlvLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAaLLRLLVEAFPGLAADWQLLLAVLAVL 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 299 GIFYGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQL-YERLHTRDMRQMG 377
Cdd:COG1007 279 SMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFAVILLLsRKGGEAEEIEDLA 358
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 378 GLWHRIAYLPAISLFFAAASLGLPGTGNFVGEFLILIGSF-ASVPWITVIATTGLVFGSVYSLIMIHRAYFGPSKSDTVL 456
Cdd:COG1007 359 GLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVeAGLYWLAVIAVLNSVISAYYYLRVVKAMYFDEPEEEAPI 438
|
330 340 350
....*....|....*....|....*....|....*.
gi 820875160 457 AgMDGRELIMVLGLAVLLIVLGVYPQPFLDTSAATM 492
Cdd:COG1007 439 S-APPGLRVALVIAALLVLLLGIFPGPLLDLAAAAA 473
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
145-441 |
3.44e-37 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 142.43 E-value: 3.44e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 145 EMMLVPMYFLIALWGHssadgKKTRIYAATKFFIFTQASGLIMLVAILGLVLVNYNTTGVLTFNYSDLLKaelpagVEYL 224
Cdd:MTH00205 118 EASLIPTLILILGWGY-----QPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSDF------YLFL 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 225 LMLGFFIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASaEFAPIAMTLGLIGIFYGA 304
Cdd:MTH00205 187 YWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNS-NFSELFFSISLWGGVMTG 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 305 FLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWHRIA 384
Cdd:MTH00205 266 MICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFP 345
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 820875160 385 YLPAISLFFAAASLGLPGTGNFVGEfLILIGSFASVPWITVIATTGLVF-GSVYSLIM 441
Cdd:MTH00205 346 FLVLMWFLLISCNMAAPPSLNLASE-ILLIMSLLSSSKISGIPLSLISFlSGAYSLYL 402
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
2-509 |
4.20e-37 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 144.52 E-value: 4.20e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 2 ILPWLILIPFIGGFLC-WLGERFGSTLPRWIALLTMSLLLGiglwlwgtgdYTLAPAPGAEPAWALEYKVEWIKR--FGI 78
Cdd:COG1009 3 LLWLIPLLPLLGALLAgLLGRRLGRRAAGWLAALAPLAAFV----------LSLLLFPAVLGGEVVVELYTWIPVgsLGL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 79 SIHLALDGLSLLMILLTGLLGVLSVLCSWKEIQRHVG----FFHLNLMwiLGGVVGVFLALDLFLFFFFWEMMLVPMYFL 154
Cdd:COG1009 73 DFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGlarfFAYLLLF--MAAMLGLVLSDNLLLLFVFWELVGLCSYLL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 155 IALWGHssadgKKTRIYAATKFFIFTQASGLIMLVAILGLvlvnYNTTGvlTFNYSDLL-KAELPAGVEY--LLMLGFFI 231
Cdd:COG1009 151 IGFWYE-----KPSARRAARKAFLVTRVGDLGLLLGILLL----GAIAG--TLNFSELLaAAPTILSSPLltLILLLLLL 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 232 AFAVKLPVVPFHSWLPDAHAqAPTAGSVDL-AGILLKTAAYGLLRFAlPLFpNASAEFAPIAMTLGLIGIFYGAFLAFAQ 310
Cdd:COG1009 220 GAFGKSAQFPLHFWLPDAME-GPTPVSALLhAATMVKAGVYLLARLS-PLF-ALSPVWLTVVAIIGAITALFAALIALAQ 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 311 TDIKRLIAFSSVSHMG--FVLIGIysgsqQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWHRIAYLPA 388
Cdd:COG1009 297 TDIKRVLAYSTVSQLGymFLALGV-----GAYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAI 371
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 389 ISLFFAAASLGLPGTGNFVGEFLILIGSFASV---PWITVIATTGLVFGSVYSLIMIHRAYFGPSKSDTVLAGMDGReLI 465
Cdd:COG1009 372 TFLIGALSLAGIPPFAGFFSKEAILEAALEAGglgPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKHPHESP-WL 450
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|.
gi 820875160 466 MVLGLAVLLI---VLGVY----PQPFLDTSAATMSGVQQWLGSAFTQLASA 509
Cdd:COG1009 451 MTLPLVVLAVlslVLGLLlpglLEGLLAPAAVLGGELHLAHGLLLNALPLL 501
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
71-499 |
6.88e-37 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 142.80 E-value: 6.88e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 71 EWIKRFGISihLALDGLSLLMILLTGLLGVLSVLCSWKEIQRHVG--FFHLNLMWILGGVVGVFLALDLFLFFFFWEMML 148
Cdd:PRK12667 69 GWPAPIGIV--YEVDLLGALLGLLTALVMFLILIYSYWYLEHESGpeWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 149 VPMYFLIALWGHssadgKKTRIYAATKFFIFTQASGLIMLVAILGLvlvnYNTTGvlTFNYSDL-LK------------A 215
Cdd:PRK12667 147 ISAYGLVAYYRD-----RGDAVEAAIKYALIGAVGTTLYFLALAFL----YATFG--TLNMADLsAKirglsfpltgglA 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 216 ELPAGVEYLLMLGFFIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAE------FA 289
Cdd:PRK12667 216 GNPPLALGVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPSLidfraaLS 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 290 PIAMTLGLIGIFYGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLH 369
Cdd:PRK12667 296 PILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAG 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 370 TRDMRQMGGLwHRIAYLPAISLFFAAASL-GLPGTGNFVGEFLILIGSFASVPWITVIAttgLVFGSVYSLI----MIHR 444
Cdd:PRK12667 376 TRDIDELAGL-GRKMPIASFAFLIGALSLvGIPPLNGFFSKLLLFNALLESGFYLPALV---LLIASAISLVgyfrAWYS 451
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 820875160 445 AYFGPSKSDTvlaGMDGRELIMV----LGLAVLLIVLGVY----PQPFLDTSAATMSGVQQWL 499
Cdd:PRK12667 452 LFFGKPKSGE---EVEHKESPSMsvviLVLALAVLILGILalflPEILDSLIEPAANQAMDPQ 511
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
144-490 |
1.82e-34 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 135.33 E-value: 1.82e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 144 WEMMLVPMYFLIALWGHSsadgkKTRIYAATKFFIFTQASGLIMLvaiLGLVLVnYNTTGvlTFNYSDLLKA-ELPAGVE 222
Cdd:PRK05777 132 LELLSLPLYALAALRRDR-----RRSLEAAIKYFVLGALASGFLL---YGMSLL-YGATG--SLSFAGIAKAlADGSGNS 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 223 YLLMLGF---FIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILlKTAAYG-LLRFALPLFPNASAEFAPIAMTLGLI 298
Cdd:PRK05777 201 LLLLFGLvflLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAvLLRLLVVAFGGLSEDWQQVLAIIAIA 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 299 GIFYGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALF-ILSGQLYERLHTRDMRQMG 377
Cdd:PRK05777 280 SMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAFgVISLLRRKGGEAESISDFA 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 378 GLWHRIAYLPAISLFFAAASLGLPGTGNFVGEFLILIGSFAS-VPWITVIATTGLVFGSVYSLIMIHRAYFGPSKSDTVL 456
Cdd:PRK05777 360 GLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAgLWWLAVIGVLNSAIGAFYYLRVIKLMYFDEPPRDAPV 439
|
330 340 350
....*....|....*....|....*....|....
gi 820875160 457 AGMDGRELIMVLGLAVLLIVLGVYPQPFLDTSAA 490
Cdd:PRK05777 440 NWPLSAGGAVLSVSALLVLVLGIFPQPLLDLAAQ 473
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-487 |
9.89e-32 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 127.91 E-value: 9.89e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 2 ILPWLILIPFIGGFLCWLGERFGSTLPR-WIALLT-MSLLLGIGLWLWGTGDYTLAPAPGAEpAWALEYKVEWIKrFGIS 79
Cdd:PRK08376 6 LPPLLIIIPLFGAFSMPIVSLLGGKAREiWAVLISfLTLIVALLVFYEVWNNGTIVYVLGAE-SPTLTLPFGSGG-FPIR 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 80 IHLALDGLSLLMILLTGLLGVLSVLCSWKEIQRHVG---FFHLNLMWILGgVVGVFLALDLFLFFFFWEMMLVPMYFLIA 156
Cdd:PRK08376 84 IIWEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGldkYYTLILLLELG-MLGMAITGDLFNFFVFLEIMSIASYALVA 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 157 LWghssaDGKKTRIYAATKFFIFTQASGLIMLVAIlGLVLVNYNTtgvLTFNYSDLLKAELPAGVEYLLMLGFFIAFAVK 236
Cdd:PRK08376 163 FR-----NDTWEAIEAGIKYMFVGSLASSMVLLGI-ALLYGQYGT---LNMAYLAVKMSENPTVVAKIALALFIAGLAMK 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 237 LPVVPFHSWLPDAHAQAPTAGSVDLagILLKTAA-YGLLRFALPLFPNA--SAEFAPIAMTLGLIGIFYGAFLAFAQTDI 313
Cdd:PRK08376 234 SGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSIYGPAinLATVGWVIIILGCLTMFVGVAMAVVQKDV 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 314 KRLIAFSSVSHMGFVLIGIYSG------------SQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWH 381
Cdd:PRK08376 312 KRLLAYHSVSQIGYMLLGLGVGlaalgdpamasyGEIALAGGIYHIVNHALYKALLFLTAGAVIYETGTRNLNELGGLAR 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 382 RIAYLPAISLFFAAASLGLPGTGNFVGEFLILIGSFASVPWITVIATTGLVFGSVYSLIMIHRAYFGPSKSDTVLAGMDG 461
Cdd:PRK08376 392 TMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFGPPSEKVMNVKEPP 471
|
490 500
....*....|....*....|....*..
gi 820875160 462 RELIMVLG-LAVLLIVLGVYPQPFLDT 487
Cdd:PRK08376 472 KPMLVPMLiLAIAIIGMGLFPWQISDK 498
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
52-481 |
6.16e-30 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 124.19 E-value: 6.16e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 52 YTLAPAPGAEPAWALEYKVEWIKRFGISIHLALDGLSLLMILLTGLLGVLSVLCS--WKEIQRHVGFFHLNLMWILGGVV 129
Cdd:TIGR00940 41 YTLGLYPYTASGGVLHYTIDWVPELGLNFTLYMDGLALLFSLLITGIGVLVVLYSiyYLSKEEPLPNFYAYLLAFMGAML 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 130 GVFLALDLFLFFFFWEMMLVPMYFLIALWGHSSADgkktrIYAATKFFIFTQASGLIMLVA--ILGLVLVNYNTTGVLTf 207
Cdd:TIGR00940 121 GVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHS-----RYGAQKSLTITVFGGLAMLGGliLLGKITGSFSIDAVIA- 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 208 NYSDLLKAELPAGVEYLLMLGFFiafaVKLPVVPFHSWLPDAHAqAPTAGSVDL-AGILLKTAAYGLLRFAlPLFPNASA 286
Cdd:TIGR00940 195 SADAIRNSPLFGTAMVLVLLGAF----TKSAQFPFHIWLPDAME-APTPVSAYLhSATMVKAGLYLLARFT-PVFAGTEA 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 287 EFAPIAMtLGLIGIFYGAFLAFAQTDIKRLIAFSSVSHMGF--VLIGIYSGSQQ-----------ALQGAVIQMLAHGLS 353
Cdd:TIGR00940 269 WFWIVGL-AGLITLLWGSYFAIFQQDLKGILAFSTISQLGLimVLLGLGSPSYHyqgddskiyalAAVAAVFHLINHATF 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 354 AAALFILSGQLYERLHTRDMRQMGGLWHRIAYLPAISLFFAAASLGLPGTGNFVGEFLIL--------IGSFASVPW--- 422
Cdd:TIGR00940 348 KGSLFMAAGIIDHETGTRDIRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFaeaitahlVNPFDTVTLgyl 427
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 820875160 423 ITVIATTGLVFGSVYSLIMIHRAYFG-------PSKSDTVLAGMdgreLIMVLGLAVLLIVLGVYP 481
Cdd:TIGR00940 428 FPYVATVASVFTFVYSLRFIHGVFFGrpkpedlPRKPHEPPRWM----LASPDILVLLVLVFGLFP 489
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
167-426 |
9.35e-30 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 121.79 E-value: 9.35e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 167 KTRIYAATKFFIFTQASGLIMLVAILGLVLVNYNTTGVLTFNYSDL--LKAELPAGVEYLLMLGFFIAFAVKLPVVPFHS 244
Cdd:PRK08676 148 RENIDAALKYIFIASTAMIFAFIGLIFLFSLTRQALGTGTLNWTELaaHASLLSPSVLGASFLFIFIGFLAKSGLVPFHT 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 245 WLPDAHAQAPTAGSVDLAGILLKTAAYGLLR-FALPLFPNASAEFAPIAMTLGLIGIFYGAFLAFAQTDIKRLIAFSSVS 323
Cdd:PRK08676 228 WLPAAYAKAPSVVSALLSGTVLNIGIYGILRlSALLRQSGAAEQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIE 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 324 HMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYeRLHTRDMRQMGGLWHRIAYLPAISLFF-AAASLGLPG 402
Cdd:PRK08676 308 HMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILH-RQYRSDRFDRIFDVFRLQPVAAWGVILgSAAIIGMPP 386
|
250 260
....*....|....*....|....
gi 820875160 403 TGNFVGEFLILIGSFASVPWITVI 426
Cdd:PRK08676 387 FPLFLSKFFILLQLGGISVWLVLA 410
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
1-486 |
1.02e-29 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 122.80 E-value: 1.02e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 1 MILPWLILIPFIGGFLCWLGERFGSTLPRWIALLTMSLLLGIGLWLWGTGDYTLapapgaepawaleykveWIKRFGISI 80
Cdd:PRK08668 1 MELTLLLLTPLIGSVLAYLLKKINEKIGVIGNALPLLFLIKLYFTLKVGTGEKL-----------------TLFFGGFKL 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 81 HLALDGLSLLMILLTGLLGVLSVLCSWKEIQRHVGFFHLNLMWILGGVVGVFLALDLFLFFFFWEMMLVPMYFLIALwgh 160
Cdd:PRK08668 64 TFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPM--- 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 161 ssadGKKTRIYAATKFFIFTQASGLIMLVAILGLvlvnYNTTGvlTFNYSDLLKAELPA-GVEYLLMLGFFIAFA--VKL 237
Cdd:PRK08668 141 ----GKKESRKASLKYFVLSAIGAYAMLYAIFLI----YAKTG--TFDFADISQGLINDtSTGFALIVFLFLLAFgvAKA 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 238 PVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGllrFALPLFPNASAEFAP-------------IAMTLGLIGIFYGA 304
Cdd:PRK08668 211 GIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYG---FLLVLYVLPGTKLFSefgtyrgvplfnyILAWLGNISIIVGT 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 305 FLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWHRIA 384
Cdd:PRK08668 288 LMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMGGLIEKMP 367
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 385 YLPAISLFFAAASLGLPGTGNFVGEFLILIGSF-ASVPWITVIATTGLVFGSVYSLIMIHRAYFGPSKSDtvLAGMDGRE 463
Cdd:PRK08668 368 FTFAMYLVAIISLAGIPPMSGFASKWLIFEALIsKGMPITAFMAFFGSIGSFLYVFRPLAGVFLGQLPSD--HKDVKEAP 445
|
490 500
....*....|....*....|....*.
gi 820875160 464 LIMVLG---LAVLLIVLGVYPQPFLD 486
Cdd:PRK08668 446 LPMLIPmaiLVLLNVVFGVAPGLVLQ 471
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
144-420 |
2.53e-29 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 121.76 E-value: 2.53e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 144 WEMMLVPMYFLIaLWGHSSADGKKTRIYaatkFFIFTQASGLIMLVAILGLVLVNYNTtgvltfnysDLLKAELPAGVEY 223
Cdd:PRK08667 140 WEIMALSSFFLV-MNDYQEEETQRAGIF----YFVMTQLSTVFLMLGIIVLFIQTGSF---------ELSPLGASAGILS 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 224 LLMLGFFIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFpNASAEFAPIAMTLGLIGIFYG 303
Cdd:PRK08667 206 LVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVL-SPELWWGVLILLAGSISALLG 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 304 AFLAFAQTDIKRLIAFSSVSHMGFVLIGI-------YSGSQQ----ALQGAVIQMLAHGLSAAALFILSGQLYERLHTRD 372
Cdd:PRK08667 285 VIYALKEHDLKGLLAYSSIENIGIILMGIglyvifgVYGLDTlallALGGALFHSLNHALFKSLLFLTAGSVVHATGTRN 364
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 820875160 373 MRQMGGLWHRIAYLPAISLFFAAASLGLPGTGNFVGEFLILIGSFASV 420
Cdd:PRK08667 365 IEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFQSF 412
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
145-444 |
7.47e-29 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 119.69 E-value: 7.47e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 145 EMMLVPMYFLIALwghssaDGKKTRIYAATKFFIFTQASGLIMLVAIlGLVlvnYNTTGVLTFNYSDLLKAELPAGVEYL 224
Cdd:PRK12665 141 EILLVASYVLLTL------GATAARVRAGVTYVMVSMVSSLLFLIGI-ALV---YAATGTLNMADLAVRLDELPSGTRTA 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 225 LMLGFFIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPnaSAEFAPIAMTLGLIGIFYGA 304
Cdd:PRK12665 211 LFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP--GGGLDTLLMVVALLTMVVGI 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 305 FLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLwHRIA 384
Cdd:PRK12665 289 LGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGL-AKAS 367
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 820875160 385 YLPAISLFFAAASL-GLPGTGNFVGEFLILIGSFASVPWITVIATTGLVFGSVYSLIMIHR 444
Cdd:PRK12665 368 PLLAVLFFVPALNLgGIPPFSGFIGKVALLEAGAEDGTWLAWALVAGGVVTSLLTLYAVAR 428
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
116-488 |
7.57e-29 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 119.28 E-value: 7.57e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 116 FFHLNLMWILGGVVGVFLALDLFLFFFFWEMMLVPMYFLIALwghssaDGKKTRIYAATKFFIFTQASGLIMLVAILGLv 195
Cdd:PRK12663 109 GFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITL------GQEREQLRGAIKYVVLNLIGSWLFLLGIGLL- 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 196 lvnYNTTGvlTFNYSDL-LKAELPAGVEYLLMLG--FFIAFAVKLPVVPFHsWLPDAHAQAPTAGSVDLAGILLKTAAYG 272
Cdd:PRK12663 182 ---YGTFG--TLNMAHIaMRLNDMGDTATLTTIAllFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYA 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 273 LLRFALPLFPNASAEFAPIAMTLGLIGIFYGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGL 352
Cdd:PRK12663 256 LIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMV 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 353 SAAALFILSGQLYERLHTRDMRQMGGLWHRIAYLPAISLFFAAASLGLPGTGNFVGEFLILIGSFASVPWITVIATTGLV 432
Cdd:PRK12663 336 VKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITS 415
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 820875160 433 FGSVYSLIMIHR-AYFGPSKSDTV-LAGMDGRELIMVLGLAVLLIVLGVYPQPFLDTS 488
Cdd:PRK12663 416 LITMYSLFRIFFlAYWGDKDGEEVnFKPIPLYRKLPLSILAVVVIAMGIAAEPLLNLT 473
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
81-499 |
4.13e-27 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 115.37 E-value: 4.13e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 81 HLALDGLSLLMILLTGLLGVLSVLCSWKEIQRHVG--------FFHLnlmwILGGVVGVFLALDLFLFFFFWEMMLVPMY 152
Cdd:PRK06521 75 HLRLDALSAFFLLVISLLGAAASLYSLGYFREYEGkgpgamgfFYNL----FLASMVLVLLADDAFSFLVAWETMSLSSW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 153 FLIalwghsSADGKKTRIYAATKFFIFTQASGLIMLVAILGLVlvnYNTTGVLTFnySDLLKAELPAGVEYLLMLGFFIA 232
Cdd:PRK06521 151 FLV------IANHREAEIRRAGFLYLLMAHAGALAILLAFGLL---ARESGSYDF--AAMRAAHLSPFWASLVFLLALFG 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 233 FAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTLGLIGIFYGAFLAFAQTD 312
Cdd:PRK06521 220 FGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFDLLGAPGWWWGVLVLALGAISAVLGVLYALAEHD 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 313 IKRLIAFSSVSHMGFVLIG-----IYSGSQQ------ALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWH 381
Cdd:PRK06521 300 LKRLLAYSTIENIGIIFVGlglamVFIAYGMpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIR 379
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 382 RIAYLPAISLFFAAASLGLPGTGNFVGEFLILIGSFAS-----------VPWITVI-----ATTGLVFGSVYSLImihra 445
Cdd:PRK06521 380 RMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLSSpglpqwglklaVPIAAAMlaltaALAAMCFVKFYGIT----- 454
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 820875160 446 YFGPSKSDTVLAG--MDGRELIMVLGLAVLLIVLGVYPQPFLD--------TSAATMSGVQQWL 499
Cdd:PRK06521 455 FLGRPRSEKAEEAheVPRWMRAAMLLLAALCVLLGLLPGWVAPvidpvaqaLVGTPLVTVASGL 518
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
52-483 |
4.18e-26 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 112.71 E-value: 4.18e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 52 YTLAPAPGAEPAWAL------------EYKVEWIKRFGISIHLALDGLSLLMILLTGLLGVLSVL-CSW--KEIQRHVGF 116
Cdd:PRK12644 28 YVLALVPAAAFVWVLaqwpavlaggapTEVVPWIPSLGLDLAFRLDALAALMSLLVLGVGALVLLyCARyfDDDEPRLGR 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 117 FHLNLMWILGGVVGVFLALDLFLFFFFWEMMLVPMYFLIalwGHSSadGKKTRIYAATKFFIFTQASGLIMLVailGLVL 196
Cdd:PRK12644 108 FAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLI---GHYA--ERAASRRAALQALLVTTAGGLAMLV---GIII 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 197 VNyNTTGvlTFNYSDLLkAELPAG--VEYLLMLgFFIAFAVKLPVVPFHSWLPDAHAqAPTAGSVDL-AGILLKTAAYGL 273
Cdd:PRK12644 180 LG-QAAG--TYRLSELL-ADPPTGpaVSVAVVL-ILVGALSKSAIVPFHFWLPGAMA-APTPVSAYLhAAAMVKAGIYLV 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 274 LRFAlPLFpNASAEFAPIAMTLGLIGIFYGAFLAFAQTDIKRLIAFSSVSHMGF--VLIGIysGSQQALQGAVIQMLAHG 351
Cdd:PRK12644 254 ARLA-PGF-ADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFltVLVGI--GTRDAALAGLAMLLAHA 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 352 LSAAALFILSGQLYERLHTRDMRQMGGLWHRIAYLPAISLFFAAASLGLPGTGNFVGEFLIL--IGSFASVPWITVIATT 429
Cdd:PRK12644 330 LFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALeaVLHDGALGPAGPVVLA 409
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 820875160 430 GLVFGSVysLIMIHRAYF--------GPSKSDTVLAGMDGRELIMVLG---LAVLLIVLGVYPQP 483
Cdd:PRK12644 410 GIVLGSI--LTVAYSLRFlwgafarkPGAFPSVAVTEMHRPSPLFLAPpavLAVLGLVLGLLPAP 472
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-492 |
1.17e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 106.96 E-value: 1.17e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 2 ILPwlILIPFIGG-FLCWLGERFGstLPRWIALLTMSLLLGIGLWLWGT----GDYTLAPApgaepawaleykvEWIKRF 76
Cdd:PRK07691 7 ILP--ILIPVITAiLLIFLGKRPI--IQRYVALIGSLLTLVAAIILVANvykhGIQTLELG-------------NWKAPF 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 77 GISihLALDGLSLLMILLTGLLGVLSVLCSWKEI--QRHVGFFHLNLMWILGGVVGVFLALDLFLFFFFWEMMLVPMYFL 154
Cdd:PRK07691 70 GIV--FVADMFAALLVLTSSIITFLVILYSFQTIgiERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVL 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 155 IALwghssaDGKKTRIYAATKFFIFTQASGLIMLVAILGLvlvnYNTTGvlTFNYSDLLK--AELPAGVEYLLM---LGF 229
Cdd:PRK07691 148 IVI------GGTKIQLRESIKYVLINVVSSAFFVVAVAIL----YSVVG--TLNMADISVkiAELSAGQTGLITvvaILF 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 230 FIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTLGLIGIFYGAFLAFA 309
Cdd:PRK07691 216 LFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILILALLTIIFGVIGAVA 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 310 QTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWHRIAYLpAI 389
Cdd:PRK07691 296 YFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVL-GW 374
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 390 SLFFAAASL-GLPGTGNFVGEFLILIGSFASVPWI--TVIATTGLVfgSVYSLIMIH-RAYFGPSKSDTVLAGMDGRELI 465
Cdd:PRK07691 375 MFFIAALSLaGIPPLSGFYGKFFIVEGTFEAGFYVsgIIVLLSSLL--VLYSVIKIFlKGFWGEPKGYDLNNKVPVKKLL 452
|
490 500 510
....*....|....*....|....*....|.
gi 820875160 466 MVLGLAVLL-IVLGV---YPQPFLDTSAATM 492
Cdd:PRK07691 453 LPAVVLVAItILYGLgaePLYPYVKQAAETL 483
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
187-430 |
2.52e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 105.80 E-value: 2.52e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 187 MLVAILGLVLVnYNTTGvlTFNYSDLLKAelPAGVEYLLMLGFfiafAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILL 266
Cdd:PRK07234 157 MLFYLIGAVLV-YQANG--TFAFSGLATA--DPEAFALIALGL----LVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVV 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 267 KTAAYGLLRFALPLFpnasaEFAPIAMTLGLIGIFYGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQAlqgaviq 346
Cdd:PRK07234 228 KAGVFPLVRCALDVP-----GLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVGGLYA------- 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 347 mLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWHRIAylpaisLFFAAASL-GLPGTGNFVGEFLILIGSFASVPWITV 425
Cdd:PRK07234 296 -LAHGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIP------LTMASFSIaGFPLLAGFVSKVLTLKNLLPWQAIALN 368
|
....*
gi 820875160 426 IATTG 430
Cdd:PRK07234 369 LAAVG 373
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
145-485 |
2.63e-24 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 105.42 E-value: 2.63e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 145 EMMLVPMYFLIALwghssADGKKTRIYAATKFFIF-TQASGLImlvaILGLVLVnYNTTGvlTFNYSDLLKAELPAGVEY 223
Cdd:TIGR01770 132 ELQSLCFYVLAGL-----KRKSRFSTEAGLKYFILgAFSSGLL----LFGISLI-YGFTG--SLNFEDLLLFLSNGMLNI 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 224 -LLMLG---FFIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTLGLIG 299
Cdd:TIGR01770 200 sLLLLGivlILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYILFGFSEAWQIFLAIIAFLS 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 300 IFYGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRD--MRQMG 377
Cdd:TIGR01770 280 MLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFGVLSLLRSYKDEWIeyISDFA 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 378 GLWHRIAYLPAISLFFAAASLGLPGTGNFVGEFLILIGSF-ASVPWITVIATTGLVFGSVYSLIMIHRAYFGPSKSDTVL 456
Cdd:TIGR01770 360 GLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLkSGLYWLAVIAVLTSVIGAFYYLRVVKVMYFDKPERRIPS 439
|
330 340
....*....|....*....|....*....
gi 820875160 457 AGMDGRELIMVLGLAVLLIVLGVYPQPFL 485
Cdd:TIGR01770 440 NPQSKAQSLLLSISALFILFLGLFPSLIL 468
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-453 |
6.38e-24 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 106.04 E-value: 6.38e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 1 MILPWLILIPFIGGFLCWLGERFGSTLPRWIALLTMSLLLGIglwlwgtgdyTLAPAPGAEPAWALEYKVEWIKRFGISI 80
Cdd:PRK12648 1 MSLLLLVLLPFLGALLAALLPRNARNAEAWLAGLVALAALVL----------LALLYPAVAAGEVIRAEIEWLPALGLNL 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 81 HLALDGLSLLMILLTGLLGVLSVLCSWKEIQRH--VGFFHLNLMWILGGVVGVFLALDLFLFFFFWEMMLVPMYFLIALW 158
Cdd:PRK12648 71 SLRLDGLAWLFALLILGIGLLVVLYARYYLSPAdpVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYW 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 159 GHSSADGKKTRIYaatkfFIFTQASGLIMLVA--ILGLVLVNYNTTGVLtfNYSDLLKAE---LPAGVeyLLMLGFFiaf 233
Cdd:PRK12648 151 HHRADARRGARMA-----LTVTGAGGLALLAGvlLLGHIVGSYDLDVVL--AAGDLIRAHplyPPALV--LILLGAF--- 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 234 aVKLPVVPFHSWLPDAHAqAPTAGSVDL-------AGILLktaaygLLRFAlPLFPNASAEFAPIAMTlGLIGIFYGAFL 306
Cdd:PRK12648 219 -TKSAQFPFHFWLPHAMA-APTPVSAYLhsatmvkAGVFL------LARLW-PVLAGTEEWFWIVGGA-GLITLLLGAYF 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 307 AFAQTDIKRLIAFSSVSHMGFV--LIGIysGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWHRIA 384
Cdd:PRK12648 289 ALFQHDLKGLLAYSTISHLGLItlLLGL--GSPLAAVAAIFHIINHATFKASLFMAAGIIDHETGTRDMRRLSGLRRLMP 366
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 820875160 385 YLPAISLFFAAASLGLPGTGNFVGE--FL---ILIGSFASVPW-ITVIATTGLVFGSVYSLIMIHRAYFGPSKSD 453
Cdd:PRK12648 367 ITATLAMVAAAAMAGVPLLNGFLSKemFFaetLDTHLLGSLDWlLPVAATLAGAFSVAYSLRFIHDVFFGPPPDD 441
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
144-484 |
4.31e-23 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 102.67 E-value: 4.31e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 144 WEMMLVPMYFLIalWGHssadGKKTRIYAATKFFIFTQASGLIMLVAILGLvlvnYNTTGVLTFNysdllkAELPAGVEY 223
Cdd:PRK12668 122 WELMAFTSTFLV--WAR----GTKAAVRAGFRYLLVHVLGGVLLLAGILLH----YAETGSFAFG------AIAGLGGTA 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 224 LLMLgfFIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRfalpLFPNAsaefaPIAMTLGLIGIFYG 303
Cdd:PRK12668 186 AWLI--LIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALAR----AFPGT-----ELLIYIGAAMAVYG 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 304 AFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWhri 383
Cdd:PRK12668 255 VFFALLENDLRRLLSYHIVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLFMSAGAVLYRTGTEKLTELGGLY--- 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 384 AYLPAISLFF--AAASL-GLPGTGNFVGEFLILIGS----FASVPWITVIATTGlVFGSVySLIMIHRAYFGPSKSDTVL 456
Cdd:PRK12668 332 RSMPLTALFClvGALSIsAFPLFSGFVSKSMIISAAgedhYVWVWLLLLLASAG-TFLHF-GIKLPYFAFFGGDSGLRVK 409
|
330 340 350
....*....|....*....|....*....|.
gi 820875160 457 ---AGMdgreLIMVLGLAVLLIVLGVYPQPF 484
Cdd:PRK12668 410 dapRNM----LVAMGIAAFLCIAIGVYPQAL 436
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
70-481 |
1.28e-22 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 101.83 E-value: 1.28e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 70 VEWIKRFGISIHLALDGLSLLMILLTGLLGVLSVLCS--WKEIQRHVGFFHLNLMWILGGVVGVFLALDLFLFFFFWEMM 147
Cdd:PRK12649 64 ISWLPSAGVEFSIYADGLAVLIGLIASGIGVIIMSYSngYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELT 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 148 LVPMYFLIALWGHssadgKKTRIYAATKFFIFTQASGLIMLVAILGLVLVNyNTTGVLTFNYSDLLKAELPAGVEYLLML 227
Cdd:PRK12649 144 SITSFMLIGYWRH-----RPESVYGATKSLLITAGGGLFMFAGFLLLHVIT-GTYDIATILQDSELIENIKGHPLFLITL 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 228 GF-FIAFAVKLPVVPFHSWLPDAhAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTlGLIGIFYGAFL 306
Cdd:PRK12649 218 ILiFIGAAAKSAQGPFYIWLPNA-MEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGT-GMITMVLAGFL 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 307 AFAQTDIKRLIAFSSVSHMGFVLI----GIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWHR 382
Cdd:PRK12649 296 AFRQTDIKAILAYSTISQLAYLMTmygyTTYHEPGLGVAAATFHLLNHATFKACLFLVAGIVAHEAATRDIRKLGGLRKE 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 383 IAYLPAISLFFAAASLGLPGTGNFVG-----EFLILIGSFASVPW---ITVIATTGLVFGSVYSLIMIHRAYFGPSKSDT 454
Cdd:PRK12649 376 MPITFIVASIAALAMAGIPPLNGFLSkemfyETSVEMGALIGGPFtiiIPAVAVLGGVFTFAYSIKLIDGIFLGERTHDH 455
|
410 420 430
....*....|....*....|....*....|
gi 820875160 455 VLAGMDGRELIMVLG---LAVLLIVLGVYP 481
Cdd:PRK12649 456 LPHHIHEAPYVMLIPaafLAGLVILFGLVP 485
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
68-481 |
1.99e-22 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 101.16 E-value: 1.99e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 68 YKVEWIKRFGISIHLALDGLSLLMILLTGLLGVLSVLCSWKEIQRH---VGFFHLNLMWILGGVVGVFLALDLFLFFFFW 144
Cdd:PRK12645 60 KTLPWIPSLGINFTLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKkeqLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFW 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 145 EMMLVPMYFLIALWGHssadgKKTRIYAATKFFIFTQASGLIMLVAILGLVLVNYNTTGVLTFNYSDLLKAE---LPAGV 221
Cdd:PRK12645 140 ELTSISSFLLISYWYE-----REASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIANADEIQNSplfIPAMI 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 222 eyLLMLGFFiafaVKLPVVPFHSWLPDAhAQAPTAGSVDL-AGILLKTAAYGLLRFAlPLFpNASAEFAPIAMTLGLIGI 300
Cdd:PRK12645 215 --LILLGAF----TKSAQFPFYIWLPDA-MEAPTPVSAYLhSATMVKAGIYLVARFT-PIF-AGSQVWFWTVTLVGLITL 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 301 FYGAFLAFAQTDIKRLIAFSSVSHMGFV--LIGI------YSGSQ-----QALQGAVIQMLAHGLSAAALFILSGQLYER 367
Cdd:PRK12645 286 FWGSLNAVKQTDLKGILAFSTVSQLGLImsLLGIgaaslhYQGDDskiyaAAITAAIFHLINHATFKGSLFMIVGIVDHE 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 368 LHTRDMRQMGGLWHRIAYLPAISLFFAAASLGLPGTGNFVGEFLIL--------IGSFASVPW---ITVIATTGLVFGSV 436
Cdd:PRK12645 366 TGTRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFesmlnateANLFSLDTWgvlFPVIAWVASVFTFV 445
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 820875160 437 YSLIMIHRAYFGPSKSDT-------VLAGMdgreLIMVLGLAVLLIVLGVYP 481
Cdd:PRK12645 446 YSIIFIFKTFFGKYKPEQlpkkaheAPIGM----LISPIILASLVVVFGLFP 493
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
230-486 |
2.15e-22 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 100.23 E-value: 2.15e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 230 FIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLF-PNASAEFAPIAMTLGLIGIFYGAFLAF 308
Cdd:PRK08377 213 IFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQnANGWSSVLKLVIIMATLTVFFAELSAL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 309 AQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWHRIAyLPA 388
Cdd:PRK08377 293 RQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMP-LTA 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 389 ISLFFAA-ASLGLPGTGNFVGEFLILIGSF-ASVPWITVIATTGLVFGSVYSLIMIHRAYFGPS----KSDTVLAgmdgr 462
Cdd:PRK08377 372 LALTIGAlSTVGIPLFNVFWSKFRIILAGLsAGYTWPVALVLGASVVEAVYYFRLIHTMWFKGEgeriRENAAIG----- 446
|
250 260
....*....|....*....|....
gi 820875160 463 elIMVLGLAVLLIVLGVYPQPFLD 486
Cdd:PRK08377 447 --IILLLLAALIVVIGIYPTPFWE 468
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
144-455 |
6.81e-22 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 99.73 E-value: 6.81e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 144 WEMMLVPMYFLIALWGHSSADGkktriyaATKFFIFTQASGLIMLVAilglVLVNYNTTGvlTFNYSDLLKAELPAGVEY 223
Cdd:PRK12650 139 WELVSLASFFLIARSGSGGEAG-------SIRTLILTFFGGLTLLAA----VAIAATQTG--TTSLSGILHSDVWAEKPG 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 224 LL-MLGFFIAFAV--KLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFAlPLFPNASAeFAPIAMTLGLIGI 300
Cdd:PRK12650 206 LTtVVAVLIAVAAftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFS-PVFHDVAV-WNWLLIIVGMITA 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 301 FYGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLW 380
Cdd:PRK12650 284 LMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLW 363
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 381 HRIAYLPAISLFFAAASLGLPGTGNFVGE------FLILIGSFASVPWITVIATTGLVFGSVYSLIMIHRAYF-GPSKSD 453
Cdd:PRK12650 364 RRMPFTFVSVTIAALSMAAVPPLFGFVSKegmltaFLEAPGGNAGVVLLLVGAALGAVFTFAYSARLVLGAFVdGPRDMS 443
|
..
gi 820875160 454 TV 455
Cdd:PRK12650 444 HV 445
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
204-448 |
6.99e-22 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 97.67 E-value: 6.99e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 204 VLTFNYSDLLkaelpagVEYLLMLGFFIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLfpn 283
Cdd:MTH00094 139 FFSLCYFDFF-------LSWEMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSL--- 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 284 aSAEFAPIAMTLGLIGIFYGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQ 363
Cdd:MTH00094 209 -NFVYNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGE 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 364 LYERLHTRDMRQMGGLWHRIAYLPAISLFFAAASLGLPGTGNFVGEFLILIGSFASVPWITVIATTGLVFGSVYSLIMIH 443
Cdd:MTH00094 288 FYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIV 367
|
....*
gi 820875160 444 RAYFG 448
Cdd:MTH00094 368 SSFMG 372
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
70-494 |
1.49e-21 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 98.45 E-value: 1.49e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 70 VEWIKRFGISIHLALDGLSLLMILLTGLLGVLSVL--CSWKEIQRHVGFFHLNLMWILGGVVGVFLALDLFLFFFFWEMM 147
Cdd:PRK12647 48 YAWVPSLGVNLSFLLDGLSLTFALLITGIGTLIVLyaGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELT 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 148 LVPMYFLIALwGHSSADGKKtriyAATKFFIFTQASGLIMLVAILGLvlvnYNTTGVLTF----NYSDLLKAE---LPAG 220
Cdd:PRK12647 128 SITSFLLIGF-NHEREAARR----AALQALLVTGGGGLALLAGLILL----GNVTGTYSLsellASGDVIREHplyLAIL 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 221 VeyLLMLGFFiafaVKLPVVPFHSWLPDAHAqAPTAGSVDL-AGILLKTAAYGLLRFALPLfpNASAEFAPIAMTLGLIG 299
Cdd:PRK12647 199 L--LVLGGAF----TKSAQFPFHFWLPNAME-APTPVSAYLhSATMVKAGIYLLARLNPVL--GGTPLWQTILPLFGGLT 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 300 IFYGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGL 379
Cdd:PRK12647 270 MLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGL 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 380 WHRIAYLPAISLFFAAASLGLPGTGNFVGEFLILIGSFASVPW---ITVIATTGLVFGSVYSLIMIHRAYFGPSKSDTVL 456
Cdd:PRK12647 350 RRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWsliLTVAAVLGNALMVAVAFLVGIKPFLGKLVETPKH 429
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 820875160 457 AGMdgRELIMVLG---LAVLLIVLGVYPQPF----LDTSAATMSG 494
Cdd:PRK12647 430 PHE--APVLMWLGpavLAVLGLLFGLFPFFFhaalLSPAASAVLG 472
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
155-475 |
3.68e-21 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 96.20 E-value: 3.68e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 155 IALWGHSSADGKKTRIYAATKFFIFTQASGLIMLVAILGLVLvnynTTGvlTFNYSDLlkAELPAGVEYLLMLGFFIAFA 234
Cdd:PRK06525 147 LCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFL----QTG--TFALSAL--SGLHGSLKYLVFLGILFAAW 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 235 VKLPVVPFHSWLPDAHAqAPTAGSVDL-AGILLKTAAYGLLRFALPLFPnASAEFAPIAMTLGLIGIFYGAFLAFAQTDI 313
Cdd:PRK06525 219 GKSAQLPFYSWLPDAME-APTPASAYLhAASMVKVGVYIFARAIQSMGP-IPHVIGYVGAVMAIVTLLYGFLMYLPQQDM 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 314 KRLIAFSSVSHMGFVLIGI-YS--GSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWHRiayLPAIS 390
Cdd:PRK06525 297 KRLLAYSTITQLGYMFFGLsLAilGSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKK---LPLVG 373
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 391 LFFAAASLGLPGT---GNFVGEFLILIGSFA--SVPWITVIATTGLVFGSV----YSLIMIHRAYFGPSkSDTVLAGMDg 461
Cdd:PRK06525 374 VGFCVAALAITGVppfNGFFSKFPIFAAGFElsVEYWILLPAMVLLLIESVasfaWFLRWFGRVVFGEP-SEAVADAAP- 451
|
330
....*....|....
gi 820875160 462 RELIMVLGLAVLLI 475
Cdd:PRK06525 452 LPGSMKLVLIVLIV 465
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
199-483 |
3.39e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 93.26 E-value: 3.39e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 199 YNTTGvlTFNYSDLLKAELPAGVE---YLLMLGFFIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLR 275
Cdd:PRK12662 184 YAITG--TLNMGDMFLIIQDLPTNraiQIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIR 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 276 FALPLFPN----ASAEFAPIAMTLGLIGIFYGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHG 351
Cdd:PRK12662 262 IVYDVFKAnfvfTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHS 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 352 LSAAALFILSGQLYERLHTRDMRQMGGLWHRIAYLPAISLFFAAASLGLPGTGNFVGEFLILIGSFASVPWITVIAttgL 431
Cdd:PRK12662 342 IVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVV---L 418
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 432 VFGSVYSLI----MIHRAYFGPSKSDTVLAGMDGR-ELIMVLGL---AVLLIVLGVYPQP 483
Cdd:PRK12662 419 LVGSGLSVIyvwkIVEALYFESRMVESKANDKAFKtPNAMVLCIwimAILSIIVGIYPIP 478
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
66-449 |
1.48e-18 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 89.04 E-value: 1.48e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 66 LEYKVEWIKRFGISIHLALDGLSLLMILLTGLLGVLSVLCSWKEIQR---HVGFFHLNLMWILGGVVGVFLALDLFLFFF 142
Cdd:PRK12646 58 LSTSIPWMKTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSrkdNLPRFYFYLTLFMFSMIGIVLSDNTILMYV 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 143 FWEMMLVPMYFLIALWgHSSADGKktriYAATKFFIFTQASGLIMLVAILGLVLVNYNTTGVLTFNYSDLLKAE---LPA 219
Cdd:PRK12646 138 FWELTSVSSFLLISYW-YNNGDSQ----FGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKNHglfIPM 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 220 GVeyLLMLGFFiafaVKLPVVPFHSWLPDAHAqAPTAGSVDL-AGILLKTAAYGLLRFAlPLFpNASAEFAPIAMTLGLI 298
Cdd:PRK12646 213 IF--MFLLGAF----TKSAQFPFHIWLPRAMA-APTPVSAYLhSATMVKAGIFLLFRFT-PLL-GLSNMYIYIVTFVGLI 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 299 GIFYGAFLAFAQTDIKRLIAFSSVSHMGFV--LIGIYSGSQQALQG------------AVIQMLAHGLSAAALFILSGQL 364
Cdd:PRK12646 284 TMLFGSITALKQWDLKGILAYSTISQLGMImaMVGIGGGYAQHQQDaiasiyvfvlfaALFHLMNHAIFKCALFMGVGII 363
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 365 YERLHTRDMRQMGGLWHRIAYLPAISLFFAAASLGLPGTGNFVGEFLILIG----------SFASVPWITVIATTGLVFG 434
Cdd:PRK12646 364 DHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDAltqtgqlsqfSLISMIIIVFIGVIASIFT 443
|
410
....*....|....*
gi 820875160 435 SVYSLIMIHRAYFGP 449
Cdd:PRK12646 444 FTYALYMVKEVFWGK 458
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
175-455 |
7.73e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 82.94 E-value: 7.73e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 175 KFFIFTQASGLIMLVAILGLVlvnYNTTGVLTFNYSDLLKAElpagvEYLLMLGFFIAFAVKLPVVPFHSWLPDAHAQAP 254
Cdd:PRK06589 170 KYLKILMISALLLFLPAVILI---YTKTGNLDFVSGGLFSKN-----QSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHY 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 255 TAGSVDLAGILLKTAAYGLLRFALPLF--PNASAEFA--PIAMTLGLIGIFYGAFLAFAQTDIKRLIAFSSVSHMGFVLI 330
Cdd:PRK06589 242 PVSALLHAVIVVKTGLFCIYKILLYIFglSYLQRIFAefNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALL 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 331 GIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWHRiayLPAISLFFAAASL---GLPGTGNFV 407
Cdd:PRK06589 322 SAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKS---FPLISFIISISSLsliGIPIFSGFI 398
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 820875160 408 GEFLILIGSFAS-VPWITVIATTGLVFGSVYS---LIMIHRAYFGPSKSDTV 455
Cdd:PRK06589 399 SKFLILLAASEQnQPWLSIIVMLVVIASSILSalyLLKILSSIYKPSLSENS 450
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
199-491 |
2.49e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 78.35 E-value: 2.49e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 199 YNTTGvlTFNYSDL--LKAELPAGVEYLLMLG---FFIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAgILLKTAAYGL 273
Cdd:PRK12666 183 YGVTG--TLNMADLaqRIAQLPAADRALLEAGaalLLVVFLIKAAMWPLNFWLPPAYAAASAPVAALFA-IMTKVGIYAI 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 274 LRFALPLFPNASAEFAPIA----MTLGLIGIFYGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLA 349
Cdd:PRK12666 260 LRLSTLLFGPEAGASAGFGqdwlLPGGLATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVH 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 350 HGLSAAALFILSGqLYER--------------LHTRDMRQMGGLWHRIAYLPAI--SLFFAAASL--GLPGTGNFVGEFL 411
Cdd:PRK12666 340 STLAAAALFLLAD-LVERqrgaaadrlavtpeLYDLDEEEEEEVGVAIPATMALlgLLFFICALAlaGLPPLSGFLGKFA 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 412 ILIGSF----ASVPWITVIAttgLVFGSVYSLIMIHRA---YFGPSKSDTVLAgMDGRELIMVLGLAVLLIVLGVYPQPF 484
Cdd:PRK12666 419 LLQALLnppgAGAAWWLWAL---VLLSGLAALIALTRAgirLFWASHERPVPR-LRVLELAPVAGLLALCVALTVFAGPV 494
|
....*..
gi 820875160 485 LDTSAAT 491
Cdd:PRK12666 495 MRYTQAT 501
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
172-360 |
3.23e-14 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 73.91 E-value: 3.23e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 172 AATKFFIFTQ-ASGLIMLvailGLVLVnYNTTGVLTFNYSDLLKAELPAGVEYLLMLGFFI---AFAVKLPVVPFHSWLP 247
Cdd:MTH00196 45 AGLKYFVLGAlSSGLFLF----GCALL-CGTTGGLHLSYINLVLNSGQSFSSVSVPIGYLLiivALLFKLSVAPFHMWAP 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 248 DAHAQAPTAGSVDLAgILLKTAAYGLLrfaLPLFPNASaefapIAMTLGLIGIFYGAFLAFAQTDIKRLIAFSSVSHMGF 327
Cdd:MTH00196 120 DVYEGAPTKTTALLA-IVPKLGIFSIL---VSIGLNVN-----ILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGF 190
|
170 180 190
....*....|....*....|....*....|...
gi 820875160 328 VLIGIYSGSQQALQGAVIQMLAHGLSAAALFIL 360
Cdd:MTH00196 191 VLWGIEIGSFESIQASLVYLFIYIIMSICVFSI 223
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
199-418 |
5.19e-14 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 74.48 E-value: 5.19e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 199 YNTTGVLTFNYSDLLKAELPAGVEyLLMLGFfIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFAL 278
Cdd:PRK08042 158 WQRYGTLDLRLLDMRMQQLPLGSD-IWLLGV-IGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSL 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 279 pLFPNASAEFAPIAMTLGLIGIFYGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSG------SQQAL-----QGAVIQM 347
Cdd:PRK08042 236 -LGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGvtgialEQPALialglVGGLYHL 314
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 820875160 348 LAHGLSAAALFILSGQLYERLHTRDMRQMGGLWHRIAYLPAISLFFAAASLGLPGTGNFVGEFLILIGSFA 418
Cdd:PRK08042 315 LNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
152-475 |
1.21e-13 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 73.27 E-value: 1.21e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 152 YFLIALWGHssadgKKTRIYAATKFFIFTQASGLIMLVAILGLvlvnYNTTGvlTFNYSDLLKAELPAGVE-----YLLM 226
Cdd:PRK06590 152 YLLIGFWYK-----KPSAGAAAMKAFIVNRVGDVGLALGIFLL----FAEFG--SLNYDEVFAAAPQFFGLgwsalTLIC 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 227 LGFFIAFAVKLPVVPFHSWLPDAHAqAPT-------AGSVDLAGILLKTAAYgllrfalPLFpnasaEFAPIAMT----L 295
Cdd:PRK06590 221 LLLFIGAMGKSAQFPLHTWLPDAME-GPTpvsalihAATMVTAGVYLVARMS-------PLF-----ELSPEALLfvaiV 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 296 GLIGIFYGAFLAFAQTDIKRLIAFSSVSHMG--FVLIGIysgsqQALQGAVIQMLAHGLSAAALFILSGQLYERLH-TRD 372
Cdd:PRK06590 288 GAVTALFAAFIGLVQTDIKRVLAYSTMSQLGymFLALGV-----GAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHhEQD 362
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 373 MRQMGGLWHriaYLPAISLFFAAASLGLPGTGNFVGEF---LILIGSFAS---VPWITVIATTGLVfgSVYSLIMIHRAY 446
Cdd:PRK06590 363 IRKMGGLRK---KMPVTYATFLIGTLALIGIPPFAGFFskdEILEAAFANghiNLFVAGLVGAFLT--AFYSFRLIFLVF 437
|
330 340
....*....|....*....|....*....
gi 820875160 447 FGPSKSDTVLAgmDGRELIMVLGLAVLLI 475
Cdd:PRK06590 438 HGKEKEKIHHP--HESPAVMTLPLIVLAV 464
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
144-413 |
1.52e-13 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 73.07 E-value: 1.52e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 144 WEMMLVPMYFLIALWghssadgkKTRIYAATKFFIFTQASGLIMLVAILGLVLVnYNTTGVLTF---------------N 208
Cdd:MTH00032 140 WEGVGVCSYLLVAFW--------TTRIQANKAAIKAIVVNRVGDVGVILGMVLI-YKTIGSLDFltfnggsvgsgimdrG 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 209 YSDLLKAELPAGVEYLLMLGFFIAFAVKLPVVPFHSWLPDAhAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEF 288
Cdd:MTH00032 211 YYGGGAYESPLAPFAIIGILLLIGCIGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTL 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 289 APIAMtLGLIGIFYGAFLAFAQTDIKRLIAFSSVSHMGF-VLIGIYSGSQQAlqgAVIQMLAHGLSAAALFILSGQLYER 367
Cdd:MTH00032 290 LIITI-FGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYmVLIIGIEGSHNV---GLFHLVNHAFFKALLFLSAGSVIHS 365
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 820875160 368 LHT--RDMRQMGGLWHRIAYLPAISLFFAAASLGLPGTGNFVGEFLIL 413
Cdd:MTH00032 366 TTVdeQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
183-426 |
1.88e-13 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 72.26 E-value: 1.88e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 183 SGLIMLVAILGLVLVNyNTTGVLTFNYSDllkaelpaGVEYLLMLGFFIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLA 262
Cdd:MTH00062 134 TSLPLLLCLLYLSLVN-GSFNFSDWGSDD--------SVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLS 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 263 GILLKTAAYGLLRFALPLFPNasaEFAPIAMTLGLIGIFYgAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQG 342
Cdd:MTH00062 205 GYIMKLGLLGVYRFCGFIFSG---SFLGYLFLCCLFSVFF-LITACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINL 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 343 AVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWHRIAYLPAISLFFAAASLGLPGTGNFVGEFLILIGSFASVPW 422
Cdd:MTH00062 281 SFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVY 360
|
....
gi 820875160 423 ITVI 426
Cdd:MTH00062 361 LLFW 364
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
185-455 |
4.83e-13 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 71.48 E-value: 4.83e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 185 LIMLVAILGLvlvnYNTTGVLTFnySDL----LKAELPAGVEYLLMLGFFIAFAVKLPVVPFHSWLPDAhAQAPTAGSVD 260
Cdd:PRK07390 185 LLLLMGVVAL----SPLAGTLNF--SDLaawaATANLDPLTATLLGLALIAGPTGKCAQFPLHLWLDEA-MEGPNPASIL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 261 LAGILLKTAAYGLLRFAlPLFpnasaEFAPIAMT----LGLIGIFYGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIysGS 336
Cdd:PRK07390 258 RNSVVVATGAWVLIKLQ-PVL-----ALSPVALTvlivIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAV--GL 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 337 QQaLQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWHRiayLPAISLFFAAASLGL---PGTGNFVGEFLIL 413
Cdd:PRK07390 330 QQ-PDIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSR---MPATTLAFLVGSAGLvalLPLGGFWALLRLA 405
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 820875160 414 IGSFASVPW-----ITVIATTGLVFGSVYSLImihraYFGPSKSDTV 455
Cdd:PRK07390 406 DGLWAVSPWlvgvlLLVNALTAFNLTRVFRLV-----FLGKPQQKTR 447
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
231-416 |
9.45e-13 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 70.66 E-value: 9.45e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 231 IAFAVKLPVVPFHSWLPDAHAQAPTAGSVdLAGILLKTAAYGLLrfalplfpNASAEFAPIAMTLGLIGIFYGAFLAFAQ 310
Cdd:MTH00198 307 VAILFKLAAAPFHMWTPDVYEGAPTPTTA-LIAIIPKFTVYILL--------TSLVITSKLLLSVAIISLVVGAFGALNQ 377
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 311 TDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFIL------SGQLYERLHTRDMRQMGG-LWHRI 383
Cdd:MTH00198 378 TRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTYLVSALASFTVictleeFGTRTPTSRQRDGSFGNYnLVRRL 457
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 820875160 384 AYLP---------AISLFFAAASL-GLPGTGNFVGEFLILIGS 416
Cdd:MTH00198 458 VDLTilsrgqpyiAFSLAIVFLSLaGIPPLLGFLGKWFILVGS 500
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
144-501 |
3.39e-12 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 68.66 E-value: 3.39e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 144 WEMMLVPMYFLIALWGHSSadgkktriYAATKFFIFTQASGLImlvaILGLVLVNYNTTGVLTFNYsdlLKAELPagvey 223
Cdd:PRK06459 101 WEIMTIPSYVAIALTKKNK--------RPAFVFMAFGELSTVL----ILAGFAWAFIISGTTNFSY---LPSPVP----- 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 224 LLMLGFfiAFAVKLPVVPFH--SWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTLGLIGIF 301
Cdd:PRK06459 161 LILASF--GFIIKMGMMPFLvsEWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYFGLTILAIGAFSIL 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 302 YGAFLAFAQTDIKRLIAFSSVSHMG--FVLIGIY---SGSQQALQGAV-----IQMLAHGLSAAALFILSGQLYERLHTR 371
Cdd:PRK06459 239 FGALYAYVSENVKGLLAFSTIENNGaiLVALGLYmvtKQLITSIEHFSlitviLYSFAHSVAKTGLFLSSGLQEKQSITY 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 372 DMRQMGGLWHRIAYLPAISLffaaasLGLPGTGNFVGEFLIL---------IGSFASVPWITVIATTGLVFGSV---YSL 439
Cdd:PRK06459 319 SKKIRNRWIELGLTLLASSL------SGLLPNIGGVASWLLLeslfmfayvLHNVISILFIVTGAIIAMGEGLAtalLIK 392
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 820875160 440 IMIHRAYFGPSKSDTVLAGMdgrelIMVLGLAVLLIVLGVYPQPFLDTSAATMSGVQQWLGS 501
Cdd:PRK06459 393 YITYTSLFRNTKEQLSKIKK-----YPILLSALIVLILGFTLPYLISPFKTSTTILGMLTNS 449
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
224-350 |
1.29e-11 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 66.61 E-value: 1.29e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 224 LLMLGFFIA-FAVKLPVVPFHSWLPDAHAQAPTAgSVDLAGILLKTAAYGL-LRFALPLFPNASAEFAPIAMTLGLIGIF 301
Cdd:PRK02504 210 ALALVFVIAgIAFKISAVPFHQWTPDVYEGSPTP-VVAFLSVGSKAAGFALaIRLLVTAFPSFDEQWKLLFTALAILSMV 288
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 820875160 302 YGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAH 350
Cdd:PRK02504 289 LGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTEAGYASMVFYLLAY 337
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
184-448 |
1.51e-11 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 66.90 E-value: 1.51e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 184 GLIMLVAILGLVLVNYNTTGVLTFNysdllkaelpaGVEYLLMLGFFIAFAVKLPVVPFHSWLPDAHAqAPTAGSVDL-- 261
Cdd:MTH00211 176 GLLLSMVWLLLNLNSWEISQLFILN-----------LDLTLFLLGLLLAAMGKSAQFGFHPWLPSAME-GPTPVSALLhs 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 262 -----AGILLktaaygLLRFaLPLFPNaSAEFAPIAMTLGLIGIFYGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGS 336
Cdd:MTH00211 244 stmvvAGVFL------LIRL-SPLFQN-NQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQ 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 337 QQAlqgAVIQMLAHGLSAAALFILSGQLyerLHTR----DMRQMGGLwHRIAYLPAISLFFAAASL-GLPGTGNFVGEFL 411
Cdd:MTH00211 316 PQL---AFLHICTHAFFKAMLFMCSGSI---IHGLnneqDIRKMGGL-SKNLPFTSSCLFLGSLALmGFPFLSGFFSKDL 388
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 820875160 412 IL-------IGSFASVpwITVIATTglvFGSVYSLIMIHRAYFG 448
Cdd:MTH00211 389 ILesmngsyLNAWALL--LTLLATS---LTAAYSFRLIFLSLGG 427
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
144-402 |
1.83e-11 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 66.64 E-value: 1.83e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 144 WEMMLVPMYFLIALWghssadgkKTRIYA---ATKFFIFTQASGLIMLVAILGLvlvnYNTTGVLTFNYSDLLKAELPAG 220
Cdd:MTH00020 140 WEGVGLCSYLLINFW--------LTRIEAnkaAIKAMLVNRVGDIGLLLAMFLL----WDRFGSLDFSSVFNMVVSAPSS 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 221 VEYLLMLGFFIAFAVKLPVVPFHSWLPDAhAQAPTAGSVDLAGILLKTAAYGLLRFALPLFpnasaEFAPIA-MTLGLIG 299
Cdd:MTH00020 208 DITLICLFLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLLIRSSPLF-----EQAPLAlIIVTIVG 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 300 ---IFYGAFLAFAQTDIKRLIAFSSVSHMGFVLI--GIYSGSQqalqgAVIQMLAHGLSAAALFILSGQLYERL-HTRDM 373
Cdd:MTH00020 282 sltVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVacGLSHYSI-----SLFHLMNHAFFKALLFLSAGSVIHALsDEQDM 356
|
250 260
....*....|....*....|....*....
gi 820875160 374 RQMGGLwhrIAYLPAISLFFAAASLGLPG 402
Cdd:MTH00020 357 RKMGGL---ISFLPLTYIFFLIGSLSLMG 382
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
172-408 |
2.61e-11 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 65.82 E-value: 2.61e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 172 AATKFFIFTQASGLIMLVAIlGLVLVNYNTTGVLTFNYSDLLKAELPAGVEYLLMLGFFIAFAVKLPvvPFHSWLPDAHA 251
Cdd:PRK06277 151 AALKYMILGNVAGSILLLGI-GFLLASTGTLNITDIHNALLVNPTSPVIYGGLLLLIFGLLYGSGLP--PFHTIKSDIYA 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 252 QAPTAGSVDLAGI-LLKTAAYGLLRF----ALPLFPNASAefapIAMTLGLIGIFYGAFLAFAQTDIKRLIAFSSVSHMG 326
Cdd:PRK06277 228 KAKPFGSALLQTFsKFVLVALMLVIFklfgGLSYFPSAQG----VLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGG 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 327 FVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLwhrIAYLPAISLFFAAASLGLPGTGNF 406
Cdd:PRK06277 304 YVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLRKLGGL---LPVMPVVAFMVLCAKLAISGVPPF 380
|
..
gi 820875160 407 VG 408
Cdd:PRK06277 381 NG 382
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
144-431 |
9.05e-11 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 64.27 E-value: 9.05e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 144 WEMMLVPMYFLIALWGHssadgKKTRIYAATKFFIFTQASGLIMLVAILGLvlvnYNTTGVLTFN-----YSDLLKA-EL 217
Cdd:PRK07376 151 WELVGMCSYLLVGFWYD-----RKGAADAAQKAFVVNRVGDFGLLLGILGL----FWATGSFDFDgiadrLSELVSSgAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 218 PAGVEYLLMLGFFIAFAVKLPVVPFHSWLPDAhAQAPT-------AGSVDLAGILLKTAAYgllrfalPLFpnasaEFAP 290
Cdd:PRK07376 222 SGWLALLLCILVFLGPMAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGVFLVARMY-------PVF-----EQFP 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 291 IAMTL----GLIGIFYGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQAlqgAVIQMLAHGLSAAALFILSGQL-- 364
Cdd:PRK07376 289 AVMTViawtGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSA---GLFHLMTHAYFKAMLFLGSGSVih 365
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 820875160 365 -------YERLHTRDMRQMGGLWHriaYLPAISLFFAAASL---GLPGTGNFVGEFLILIGSFASVP--WITVIATTGL 431
Cdd:PRK07376 366 gmeevvgHDPVLAQDMRLMGGLRK---YMPITAITFLIGCLaisGIPPFAGFWSKDEILGAAFEANPalWFVGFLTAGM 441
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
231-420 |
9.35e-11 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 63.87 E-value: 9.35e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 231 IAFavKLPVVPFHSWLPDAHAQAPTAgSVDLAGILLKTAAYGLL-RFALPLFPNASAEFAPIAMTLGLIGIFYGAFLAFA 309
Cdd:CHL00049 224 IGF--KLSLAPFHQWTPDVYEGSPTP-VVAFLSVTSKVAASALAtRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAIT 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 310 QTDIKRLIAFSSVSHMGFVLIGIYSG-SQQALQGAVIQMLAH---GLSAAALFILSGQlyeRLHTRDMRQMGGLWHRIAY 385
Cdd:CHL00049 301 QTSMKRMLAYSSIGQIGYVIIGIIVGdSNDGYASMITYMLFYifmNLGTFACIVLFGL---RTGTDNIRDYAGLYTKDPF 377
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 820875160 386 LpAISLFFAAASL-GLPGTGNFVGE-------------FLILIGSFASV 420
Cdd:CHL00049 378 L-ALSLALCLLSLgGIPPLAGFFGKlylfwcgwqaglyFLVSIGLLTSV 425
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
220-440 |
6.12e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 60.67 E-value: 6.12e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 220 GVEYLLMLGFFIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILlKTAAYgllrFALPLFpNASAEFAPIAMTLGLIG 299
Cdd:MTH00144 81 SFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVAPL----FLLSNF-LDLYWLAYLLCVISVLS 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 300 IFYGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQalqgAVIQMLAHGLSAAALFILSGQLYerlhTRDMRQMGGL 379
Cdd:MTH00144 155 ALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWL----MWMYFLIYIVSSGFLFFSLWSGD----SGSMKDLGSL 226
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 820875160 380 WHRIAYLPAISLFFAAASlGLPGTGNFVGEFLILIGSFASVPWITVIAttgLVFGSVYSLI 440
Cdd:MTH00144 227 KPSYKTGLSIISLLLSLG-GLPPFLGFCSKLLVLISSMESSPLLLILL---LLLGSLISLF 283
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
231-447 |
1.45e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 60.03 E-value: 1.45e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 231 IAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAgILLKTAAYGLLRFALPLfpnasaefAPIAMTLGLIGIFYGAFLAFAQ 310
Cdd:MTH00199 198 ISLLFKLSAAPFHMWAPDVYEGAPTITTALLA-TVPKIGVFSILVQIGPV--------TNVVLICAVLSIIYGAIGALNQ 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 311 TDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALF--ILSGQLYERLhtrdMRQMGGLW--HRIAYL 386
Cdd:MTH00199 269 TKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIYMIIYVIMSICSFsiILSLKLTKGL----IVEVSGLSrkNPVIAL 344
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 820875160 387 PAISLFFAAAslGLPGTGNFVGEFLILIGSFASVPW-ITVIATTGLVFGSVYSLIMIHRAYF 447
Cdd:MTH00199 345 TLALTFLSIA--GIPPLAGFLSKWLILLSGVSSGYYlICIIAVLSSVIAGVYYVRVVQIIYF 404
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
224-480 |
4.02e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 58.97 E-value: 4.02e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 224 LLMLGFFIAFAVklpvVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFAlplfpnasaEFAPIAMTLGLIGIFYG 303
Cdd:PRK12664 149 LFMLGLLINCAC----FPASSWVVDAYPAASNFGIIVLSLFTTKVAALVLLLFF---------SGEEILLFLGIITAIYG 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 304 AFLAFAQTDIKRLIAFSSVSHMGFVL--IGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWH 381
Cdd:PRK12664 216 IIFASLEQNIRRLLCYNVVGQMGLLIiaIGFSGSSGVAIGILILQIVLSVVYQTLLFMVADSVINRTRKFNLNRVGGLFK 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 382 riAYLPAISLFFAAASLG-LPGTGNFVGEFLIL----IGSFASVPWITVIATTGLVFGSVYSLIMIHRAYFGPSKSDTVL 456
Cdd:PRK12664 296 --MSLEAMCCIIAILNMGaFPGTAGFVSKSLIThsidTAGLTLVLYKKLFLICSLLLFASVGLKFFWYAFISKSKSKPEA 373
|
250 260
....*....|....*....|....
gi 820875160 457 AGMDGRELIMVLGLAVLLIVLGVY 480
Cdd:PRK12664 374 EKVYIGSKLSMIILVLICVVLGMF 397
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
224-380 |
5.63e-09 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 58.62 E-value: 5.63e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 224 LLMLGFFIAFAVKLPVVPFHSWLPDAHAqAPTAGSVDLAGILLKTAAYGLL-RFAlpLFPNASAEFAPIAMTLGLIGIFY 302
Cdd:MTH00207 180 YIALSIMIAAMTKSAQMPFSSWLPAAMA-APTPVSALVHSSTLVTAGVFLLiRFY--PFLSSTYWFNPALLLTASLTMLM 256
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 820875160 303 GAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQAlqgAVIQMLAHGLSAAALFILSGQL-YERLHTRDMRQMGGLW 380
Cdd:MTH00207 257 AGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKL---ALFHLITHALFKALLFVCAGSLiHSHHHSQDLRTMGNLT 332
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
224-442 |
7.34e-09 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 58.00 E-value: 7.34e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 224 LLMLGFFIAFAVKLPVVPFHSWLPDAhAQAPTAGSVDL-------AGILLktaaygLLRFAlPLFPNAsaefaPIAMT-- 294
Cdd:MTH00066 208 LPLLGLILAAAGKSAQFGLHPWLPAA-MEGPTPVSALLhsstmvvAGIFL------LIRFH-PLLENN-----QTALTic 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 295 --LGLIGIFYGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIysGSQQAlQGAVIQMLAHGLSAAALFILSGQLYERLHT-R 371
Cdd:MTH00066 275 lcLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTI--GLNQP-QLAFFHICTHAFFKAMLFLCSGSIIHSLNDeQ 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 372 DMRQMGGLWHriaYLPAISLFFAAASLGLPGTGNFVGEF----LI------LIGSFASVpwITVIATTglvFGSVYSLIM 441
Cdd:MTH00066 352 DIRKMGGLQK---ALPITTSCLTIGSLALTGTPFLAGFFskdaIIeamntsNLNSWALI--LTLIATS---FTAVYSFRI 423
|
.
gi 820875160 442 I 442
Cdd:MTH00066 424 I 424
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
144-379 |
2.38e-08 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 56.82 E-value: 2.38e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 144 WEmmLVPM--YFLIALWghssadgkKTRIYAAT---KFFIFTQASGLIMLVAILGLvlvnYNTTGvlTFNYSDLLK--AE 216
Cdd:CHL00025 151 WE--LVGMcsYLLIGFW--------FTRPIAANacqKAFVTNRVGDFGLLLGILGF----YWITG--SFEFRDLFEifNN 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 217 LPAGVEYLLMLGFFIAFAVKLPVV------PFHSWLPDAhAQAPT-------AGSVDLAGILLktaaygLLRFaLPLFpn 283
Cdd:CHL00025 215 LIYNNEVNLLFATLCAFLLFLGPVaksaqfPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARL-LPLF-- 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 284 asaEFAPIAMTL----GLIGIFYGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQAlqgAVIQMLAHGLSAAALFI 359
Cdd:CHL00025 285 ---IVIPYIMNLisliGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRA---ALFHLITHAYSKALLFL 358
|
250 260
....*....|....*....|....*....
gi 820875160 360 LSGQL---------YERLHTRDMRQMGGL 379
Cdd:CHL00025 359 GSGSVihsmepivgYSPDKSQNMVLMGGL 387
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
144-394 |
1.51e-07 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 53.89 E-value: 1.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 144 WEMMLVPMYFLIAL---WGHSSADGKktriYAATKFFIftqaSGLIMLVAILGLVLV--NYNTTGVLTFNYSDLLKAELP 218
Cdd:PRK08601 132 WGATLLGLTLLIGLnkgWKVAREAAK----ISGMLFLI----SWLALALAIVWLFIAtgEWQLTSVLSNENLAQLGTWEK 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 219 AGVEYLLMLgffiafAVKLPVV--PFHSWLPDAhAQAPT-------AGSVDLAGILLKtaaygllRFAlPLFPNASAEFa 289
Cdd:PRK08601 204 TGINLLLIL------AVMIPAAqwPFQRWLIES-AVAPTpvsaimhAGLVNAGGIMLT-------RFS-PLFHDDIAQI- 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 290 pIAMTLGLIGIFYGAFLAFAQTDIKRLIAFSSVSHMGFVLI----GIYSgsqqalqGAVIQMLAHGLSAAALFILSGQLY 365
Cdd:PRK08601 268 -LLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFMLVqcalGAYS-------AAIIHLILHGLFKATLFLQSGSAV 339
|
250 260 270
....*....|....*....|....*....|.
gi 820875160 366 ER--LHTRDMRQMGGLWHRIAYLPAISLFFA 394
Cdd:PRK08601 340 PRfnIVKQANEKKSYLWIVVGRVLGLLIAIA 370
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
203-403 |
3.59e-07 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 52.73 E-value: 3.59e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 203 GVLTFNYSDLLKAELPAGVEYLLMLGFFIAFAVKLPVVPFHSWLPDAHAqAPTAGSVDLAGILLKTAA-YGLLRFALPLF 281
Cdd:MTH00209 155 WMLMHGNWNIFYLNFNSNLGSVISVLIVLAAMTKSAQIPFSAWLPAAMA-APTPVSALVHSSTLVTAGvYLLIRFFPSLF 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 282 pnASAEFAPIAMTLGLIGIFYGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQAlqgAVIQMLAHGLSAAALFILS 361
Cdd:MTH00209 234 --SSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPEL---AFFHLITHALFKALLFICA 308
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 820875160 362 GQL-YERLHTRDMRQMGGLWHriaYLPAISLFFAAASLGLPGT 403
Cdd:MTH00209 309 GNIiHSHGHSQDIRMVGNLWY---QMPITSICLNIANLSLCGI 348
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
154-441 |
1.48e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 50.35 E-value: 1.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 154 LIALWGHSSAdgkktrIYAATKFFIfTQA--SGLIMLVAILGLVLVNYNTTGVLTFNYSDLLkaelpagveyllmlgFFI 231
Cdd:MTH00200 43 LLIKQHHPRK------VEATTKYFI-IQAtaSALLLFGGLLNAWTSGQWGISEMLGPLSETL---------------ILL 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 232 AFAVKLPVVPFHSWLPDahaqapTAGSVDLAGILLKTAAYGLLRFALpLFPNASAEFAPIAMTLGLIGIFYGAFLAFAQT 311
Cdd:MTH00200 101 ALALKLGLAPGHFWVPD------VLQGLSLQTGLILSTWQKLAPFAL-LIQLAPALNSNILLLLGLLSVLVGGWGGLNQT 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 312 DIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMlahgLSAAALFIlsgqLYERLHTRDMRQMGGLWHRIAYLPAISL 391
Cdd:MTH00200 174 QLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYV----IITLTVFL----LLNLLNSTKINSLSSSKTKNPILSMLLG 245
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 820875160 392 FFAAASLGLPGTGNFVGEFLILIGSFASvpwITVIATTGLVFGSVYSLIM 441
Cdd:MTH00200 246 LTLLSLGGLPPLTGFFPKWLILQELSKQ---GLFIYATILLLGSLLSLFF 292
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
224-362 |
4.18e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 49.15 E-value: 4.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 224 LLMLGFfiafaVKLPVVPFHSWLPDAHAqAPTAGSVDLAGILLKTAA-YGLLRFALPLFpnaSAEFAPIAMTLGLIGIFY 302
Cdd:MTH00095 170 LLLTSF-----TKSAQFPFSSWLPKAMS-APTPVSSLVHSSTLVTAGlILLMNFSYLIL---NMNVMKIMLLIGLFTMFF 240
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 820875160 303 GAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGsqqaLQG-AVIQMLAHGLSAAALFILSG 362
Cdd:MTH00095 241 SSLSALVEEDMKKVVALSTLSQMGFSMLTFGSG----LSFvSFIHLLSHALFKSCLFMQVG 297
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
144-413 |
4.82e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 49.24 E-value: 4.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 144 WEMMLVPMYFLIALWGhssadgkkTRIyAATKFFIftqASGLIMLVAILGLVL---VNYNTTGVLTFN-YSDLLkaELPA 219
Cdd:MTH00210 140 WEGVGLCSYLLINFWL--------TRI-KANKAAI---KAMLINRVGDIGLVLamiMILKEFGTLEFStISSLL--VTNI 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 220 GVEYLLMLGF--FIAFAVKLPVVPFHSWLPDAhAQAPTAGSVDLAGILLKTAAYGLLRFALPLFpnasaEFAPIAMT--- 294
Cdd:MTH00210 206 NKESLTIICLllFIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLIIRSGPLF-----EGSPLALTivt 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 295 -LGLIGIFYGAFLAFAQTDIKRLIAFSSVSHMGF-VLIGIYSGSQQALqgavIQMLAHGLSAAALFILSGQLYERLH-TR 371
Cdd:MTH00210 280 iLGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYmVMVCGISNYSTSL----FHLMNHAFFKALLFLSAGSVIHAVSdEQ 355
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 820875160 372 DMRQMGGLWHRIAYLPAISLFFAAASLGLPGTGNFVGEFLIL 413
Cdd:MTH00210 356 DMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLIL 397
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
183-449 |
5.63e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 48.81 E-value: 5.63e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 183 SGLIMLvaiLGLVLVNYNT---TGVLTFNYSdllkaelPAGVEYLLMLGFFIAFAVKLPVVPFHSWLPDAhAQAPTAGSV 259
Cdd:MTH00208 203 IGIILF---LSLSLINFNSwnlNEILSLNNS-------NSFLINILLFGILLAAAGKSAQFGLHPWLPAA-MEGPTPVSA 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 260 DL-------AGILLktaaygLLRFAlPLFPNASAeFAPIAMTLGLIGIFYGAFLAFAQTDIKRLIAFSSVSHMGF--VLI 330
Cdd:MTH00208 272 LLhsstmvvAGVFL------LIRTS-PLISNSPW-FLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLmvVAI 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 331 GIysgSQQALqgAVIQMLAHGLSAAALFILSGQLYERLHT-RDMRQMGGLwhrIAYLPAISLFFAAASLGLPGT---GNF 406
Cdd:MTH00208 344 GL---NQPNL--ALFHICTHAFFKAMLFLCSGSIIHSLNNeQDLRKMGGL---SFLLPVTSSCIILGSLALMGTpflAGF 415
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 820875160 407 VGEFLILIGSFASVP-----WITVIATtglVFGSVYSLIMIHRAYFGP 449
Cdd:MTH00208 416 YSKDLILEAGLASISnllsiILALIAT---LLTAVYSFRIIFFCFLNN 460
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
243-448 |
8.41e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 48.31 E-value: 8.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 243 HSWLPDAhAQAPTAGSVDL-------AGILLktaaygLLRFAlPLFPNASAeFAPIAMTLGLIGIFYGAFLAFAQTDIKR 315
Cdd:MTH00108 230 HPWLPSA-MEGPTPVSALLhsstmvvAGVFL------LIRFH-PLMENNKT-IQTLTLCLGAITTLFTAICALTQNDIKK 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 316 LIAFSSVSHMGF--VLIGIysgSQQALqgAVIQMLAHGLSAAALFILSGQLYERLHT-RDMRQMGGLWHRiayLPAISLF 392
Cdd:MTH00108 301 IVAFSTSSQLGLmmVTIGI---NQPHL--AFLHICTHAFFKAMLFMCSGSIIHNLNDeQDIRKMGGLFKT---LPFTSTA 372
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 820875160 393 FAAASLGLPGTgnfvgEFLI------LIGSFASV----PW---ITVIATTglvFGSVYSLIMIHRAYFG 448
Cdd:MTH00108 373 LIIGSLALTGM-----PFLTgfyskdLIIEAANTsytnAWallITLIATS---LTAAYSTRIIFFALLG 433
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
170-330 |
1.51e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 47.12 E-value: 1.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 170 IYAATKFFIfTQ--ASGLIMLVAILglvlvNYNTTG-----VLTFNYSDLLkaelpagveyllmlgFFIAFAVKLPVVPF 242
Cdd:MTH00112 53 TEAATKYFL-TQaaASALILFSSTT-----NAWNTGqwditQLTNPTSCTL---------------LTLALAMKLGLAPF 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 243 HSWLPDAhaqapTAGSVDLAGILL----KTAAYGLLRFALPLFPnasaefAPIAMTLGLIGIFYGAFLAFAQTDIKRLIA 318
Cdd:MTH00112 112 HFWLPEV-----LQGSTTTTALILstwqKLAPLTLLLMTSNSLN------PTLLLTLAILSTLIGGWGGLNQTQLRKIMA 180
|
170
....*....|..
gi 820875160 319 FSSVSHMGFVLI 330
Cdd:MTH00112 181 FSSIAHLGWMIA 192
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
224-442 |
2.05e-05 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 47.08 E-value: 2.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 224 LLMLGFFIAFAVKLPVVPFHSWLPDAhAQAPTAGSVDL-------AGILLktaaygLLRFAlPLFPNAsaefaPIAMT-- 294
Cdd:MTH00004 210 LPLLGLILAATGKSAQFGLHPWLPAA-MEGPTPVSALLhsstmvvAGIFL------LIRTH-PLLQNN-----QTALTic 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 295 --LGLIGIFYGAFLAFAQTDIKRLIAFSSVSHMGF--VLIGIysgSQQALqgAVIQMLAHGLSAAALFILSGQLyerLHT 370
Cdd:MTH00004 277 lcLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLmmVTIGL---NQPQL--AFLHISTHAFFKAMLFLCSGSI---IHN 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 371 ----RDMRQMGGLwHRIayLPAISLFFAAASLGLPGTgNFVGEF----LIL-------IGSFASVpwITVIATTglvFGS 435
Cdd:MTH00004 349 lnneQDIRKMGGL-QKT--LPITSSCLTIGNLALMGT-PFLSGFyskdTIIetlntsyLNAWALL--LTLLATS---FTA 419
|
....*..
gi 820875160 436 VYSLIMI 442
Cdd:MTH00004 420 AYSLRMI 426
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
172-330 |
2.84e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 46.38 E-value: 2.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 172 AATKFFIfTQ--ASGLIMLVAILglvlvNYNTTGVLTFNysdllkaELPAGVEYLLMLgffIAFAVKLPVVPFHSWLPDA 249
Cdd:MTH00105 55 AATKYFL-TQatASMLLMMAIII-----NLMYSGQWTIT-------KLTNPTASTLMT---IALAMKLGLAPFHFWVPEV 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 250 haqapTAGSVDLAGILL----KTAAYGLLRFALP-LFPNasaefapIAMTLGLIGIFYGAFLAFAQTDIKRLIAFSSVSH 324
Cdd:MTH00105 119 -----TQGIPLSSGMILltwqKLAPLSILYQISPsINPN-------LLLTLAILSILIGGWGGLNQTQLRKILAYSSIAH 186
|
....*.
gi 820875160 325 MGFVLI 330
Cdd:MTH00105 187 MGWMTA 192
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
243-403 |
2.88e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 46.75 E-value: 2.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 243 HSWLPDAhAQAPTAGSVDL-------AGILLktaaygLLRFAlPLFPNAsaefaPIAMT----LGLIGIFYGAFLAFAQT 311
Cdd:MTH00137 235 HPWLPSA-MEGPTPVSALLhsstmvvAGIFL------LIRLS-PLMENN-----QTALTtclcLGALTTLFTATCALTQN 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 312 DIKRLIAFSSVSHMGFVLIGIysGSQQAlQGAVIQMLAHGLSAAALFILSGQLYERLH-TRDMRQMGGLwHRIAylPAIS 390
Cdd:MTH00137 302 DIKKIVAFSTSSQLGLMMVTI--GLNQP-QLAFLHICTHAFFKAMLFLCSGSIIHSLNdEQDIRKMGGL-HHLT--PFTS 375
|
170
....*....|...
gi 820875160 391 LFFAAASLGLPGT 403
Cdd:MTH00137 376 SCLTIGSLALTGT 388
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
227-460 |
1.77e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 44.06 E-value: 1.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 227 LGFFIAFA--VKLPVVPFHSWLPDAHAqAPTAGSVDLAGILLKTAA-YGLLRFalplFPNA--SAEFAPIAMTLGLIGIF 301
Cdd:MTH00151 178 LGLLLVLAamTKSAQIPFSSWLPAAMA-APTPVSALVHSSTLVTAGvFLLIRF----FPFLssSSGFSSFLLFISLLTLL 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 302 YGAFLAFAQTDIKRLIAFSSVSH---------MGFVLIgiysgsqqalqgAVIQMLAHGLSAAALFILSGQLyerLH--- 369
Cdd:MTH00151 253 MAGISACYENDLKKIIALSTLSQlgvmmfslgLGMPSL------------ALFHLYTHALFKALLFLCAGSI---IHsss 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 370 -TRDMRQMGGLWHRiayLPAISLFFAAASL---GLPGTGNFVGEFLILIGSFAS-VPWITVI-ATTGLVFGSVYSLIMIH 443
Cdd:MTH00151 318 gTQDIRLLGSLFLS---LPLTSGCLNISSLslcGAPFLSGFYSKDLILESSLMSpTSLLMVLlMFVGVGLTALYSARLSF 394
|
250
....*....|....*..
gi 820875160 444 RAYFGPSKSDTVLAGMD 460
Cdd:MTH00151 395 CLVWGSMKSSSLSSKSD 411
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
170-330 |
8.12e-04 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 41.84 E-value: 8.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 170 IYAATKFFIFTQASGLIMLVAILglvlvnynttgVLTFNYSDLLKAELPAGVEYLLMLgffIAFAVKLPVVPFHSWLPDA 249
Cdd:MTH00041 53 VEATIKYFLVQAFSAAILLNGAL-----------IQAWLSGSWSINGPLNTLSSIIIT---LALALKLGLAPCHFWFPDV 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 250 haqapTAGSVDLAGILLKT---AAYGLLRFALPLFPNASaefapIAMTLGLIGIFYGAFLAFAQTDIKRLIAFSSVSHMG 326
Cdd:MTH00041 119 -----LQGLPFLQGLIIATwqkIAPLILLISISNLLNSN-----ILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLG 188
|
....
gi 820875160 327 FVLI 330
Cdd:MTH00041 189 WIII 192
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
170-330 |
1.90e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 40.29 E-value: 1.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 170 IYAATKFFIfTQ--ASGLIMLVAILglvlvNYNTTGVLTFNysdLLKAELPAgveylLMLGffIAFAVKLPVVPFHSWLP 247
Cdd:MTH00070 53 TEAATKYFL-TQasASALILFSSTI-----NAWFTGEWTIM---NMQTPLPT-----IMLT--IALMMKLGIAPFHFWLP 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 248 DAhaqaptagsvdLAGILLKTaayGLL--------RFALpLFPNASAEFAPIAMTLGLIGIFYGAFLAFAQTDIKRLIAF 319
Cdd:MTH00070 117 EV-----------LQGLDLTT---GLIlstwqklaPMAL-LIQISHLLNSNLLIIMGLLSTLIGGWGGLNQTQLRKIMAY 181
|
170
....*....|.
gi 820875160 320 SSVSHMGFVLI 330
Cdd:MTH00070 182 SSIAHLGWMII 192
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
229-337 |
2.40e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 40.04 E-value: 2.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 229 FFIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAgILLKTAAYGLLRFALPLFPnasaefapIAMTLGLIGIFYGAFLAF 308
Cdd:MTH00197 85 VILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLA-TWQKLAPLLILAFNSSSFM--------GLLICSVLSSLIGGIGGM 155
|
90 100
....*....|....*....|....*....
gi 820875160 309 AQTDIKRLIAFSSVSHMGFVLIGIYSGSQ 337
Cdd:MTH00197 156 NQSNIRQLLAYSSIGHTGWMLMSLVYSPS 184
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
172-375 |
5.81e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 39.30 E-value: 5.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 172 AATKFFIFTQASGLIMLVAILGLvlvnYNTTGVLTFnySDLLKAELPAGVEYLLML-GFFIAFAV--KLPVVPFHSWLPD 248
Cdd:PRK08168 152 AAHKKFIADRLAELLLLAAAALA----YLEVGSLSL--SALWAHLAAQGASPSLQAaALLLVLAVilKTAQLPVHGWLIQ 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 820875160 249 AhAQAPT-------AGSVDLAGILLktaayglLRFAlPLFPNASAEFApIAMTLGLIGIFYGAFLAFAQTDIKRLIAFSS 321
Cdd:PRK08168 226 V-MEAPTpvsallhAGVVNLGGFVL-------IRFA-PLLEQAPPARW-LLVLVGLATAVLAGLVMLTRISIKVRLAWST 295
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 820875160 322 VSHMGFVLIGIYSGSQQAlqgAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQ 375
Cdd:PRK08168 296 VAQMGFMLLECGLGLYEL---ALLHLVAHSLYKAHAFLSASEAVRDTRLRRLQG 346
|
|
| |
