NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|880813002|ref|WP_048664535|]
View 

phosphopentomutase [Vibrio crassostreae]

Protein Classification

phosphopentomutase( domain architecture ID 10012347)

phosphopentomutase catalyzes the interconversion of alpha-D-ribose 5-phosphate and alpha-D-ribose 1-phosphate

CATH:  3.30.70.1250
EC:  5.4.2.7
Gene Ontology:  GO:0008973|GO:0030145|GO:0006015
PubMed:  21193409
SCOP:  4003235

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
PRK05362 PRK05362
phosphopentomutase; Provisional
1-406 0e+00

phosphopentomutase; Provisional


:

Pssm-ID: 235430  Cd Length: 394  Bit Score: 722.29  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002   1 MKRAFILVLDSFGIGETADADKFGDVGSDTMGHIADHcdqgladnadRKGPLTLPNLSKLGLAMAHKEstgRFAPGMDAD 80
Cdd:PRK05362   1 MKRVFLIVLDSVGIGAAPDAAKFGDEGADTLGHIAEA----------RKGGLKLPNLAKLGLGNIATG---TPIAGVPAN 67
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002  81 AEIIGAYGHAAELSSGKDTPSGHWEIAGVPVLFDWGYFTdkeNSFPKELTDRILERAGLSGFLGNCHSSGTEILDNLGEE 160
Cdd:PRK05362  68 AEPIGYYGKAQEVSSGKDTPTGHWEIMGVPVLFPFGYFP---NGFPQELIDEIEERAGRPGILGNKHASGTEIIDELGEE 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 161 HMKTGLPIFYTSADSVFQIACHEETFGLQNLLDLCQIAREELED--YNIGRVIARPFIGpGKGQFERTGNRRDLSVEPPA 238
Cdd:PRK05362 145 HMKTGKPIVYTSADSVFQIAAHEEVFGLEELYRICEIAREILLDrpYNVGRVIARPFVG-EPGNFTRTGNRHDYALKPPA 223
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 239 ATILQKLaDEKGGNIHSIGKISDIYAGCGITQKTKATGIPALFEATKEAINEAGDNTIVFTNFVDFDSAYGHRRDVAGYA 318
Cdd:PRK05362 224 PTVLDKL-KEAGGEVIAVGKIADIFAGQGITEKVKTKSNMDGMDATIEEMKEAGDNGLVFTNLVDFDSLYGHRRDVAGYA 302
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 319 AALEYFDGRINEIIDMMKEDDVLILTADHGCDPTWPGTDHTREHIPVIVYGQKVPAGSLGRRDTFADIGQSLASYFGTSP 398
Cdd:PRK05362 303 AALEEFDARLPELLAALKEDDLLIITADHGNDPTWPGTDHTREYVPLLVYGPKFKGGSLGHRETFADIGATIADNFGVEP 382

                 ....*...
gi 880813002 399 MGHGTSFL 406
Cdd:PRK05362 383 MEYGKSFL 390
 
Name Accession Description Interval E-value
PRK05362 PRK05362
phosphopentomutase; Provisional
1-406 0e+00

phosphopentomutase; Provisional


Pssm-ID: 235430  Cd Length: 394  Bit Score: 722.29  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002   1 MKRAFILVLDSFGIGETADADKFGDVGSDTMGHIADHcdqgladnadRKGPLTLPNLSKLGLAMAHKEstgRFAPGMDAD 80
Cdd:PRK05362   1 MKRVFLIVLDSVGIGAAPDAAKFGDEGADTLGHIAEA----------RKGGLKLPNLAKLGLGNIATG---TPIAGVPAN 67
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002  81 AEIIGAYGHAAELSSGKDTPSGHWEIAGVPVLFDWGYFTdkeNSFPKELTDRILERAGLSGFLGNCHSSGTEILDNLGEE 160
Cdd:PRK05362  68 AEPIGYYGKAQEVSSGKDTPTGHWEIMGVPVLFPFGYFP---NGFPQELIDEIEERAGRPGILGNKHASGTEIIDELGEE 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 161 HMKTGLPIFYTSADSVFQIACHEETFGLQNLLDLCQIAREELED--YNIGRVIARPFIGpGKGQFERTGNRRDLSVEPPA 238
Cdd:PRK05362 145 HMKTGKPIVYTSADSVFQIAAHEEVFGLEELYRICEIAREILLDrpYNVGRVIARPFVG-EPGNFTRTGNRHDYALKPPA 223
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 239 ATILQKLaDEKGGNIHSIGKISDIYAGCGITQKTKATGIPALFEATKEAINEAGDNTIVFTNFVDFDSAYGHRRDVAGYA 318
Cdd:PRK05362 224 PTVLDKL-KEAGGEVIAVGKIADIFAGQGITEKVKTKSNMDGMDATIEEMKEAGDNGLVFTNLVDFDSLYGHRRDVAGYA 302
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 319 AALEYFDGRINEIIDMMKEDDVLILTADHGCDPTWPGTDHTREHIPVIVYGQKVPAGSLGRRDTFADIGQSLASYFGTSP 398
Cdd:PRK05362 303 AALEEFDARLPELLAALKEDDLLIITADHGNDPTWPGTDHTREYVPLLVYGPKFKGGSLGHRETFADIGATIADNFGVEP 382

                 ....*...
gi 880813002 399 MGHGTSFL 406
Cdd:PRK05362 383 MEYGKSFL 390
DeoB COG1015
Phosphopentomutase [Carbohydrate transport and metabolism];
1-406 0e+00

Phosphopentomutase [Carbohydrate transport and metabolism];


Pssm-ID: 440639  Cd Length: 385  Bit Score: 671.38  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002   1 MKRAFILVLDSFGIGETADADKFGDVGSDTMGHIADHcdqgladnadrKGPLTLPNLSKLGLAMAHKestgrfAPGMDAD 80
Cdd:COG1015    1 MKRAILIVLDSVGIGEAPDAAKFGDEGANTLGHIAEA-----------VGGLNLPNLARLGLGNIAP------LAGLPPV 63
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002  81 AEIIGAYGHAAELSSGKDTPSGHWEIAGVPVLFDWGYFTDkenSFPKELTDRILERAGlSGFLGNCHSSGTEILDNLGEE 160
Cdd:COG1015   64 EEPLGAYGKMAEVSAGKDTTTGHWEIAGLPVEFPFPTFPD---GFPEELIDEFEERTG-RGVLGNKPASGTEIIEELGEE 139
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 161 HMKTGLPIFYTSADSVFQIACHEETFGLQNLLDLCQIAREEL-EDYNIGRVIARPFIGPgKGQFERTGNRRDLSVEPPAA 239
Cdd:COG1015  140 HMRTGKPIVYTSADSVFQIAAHEEVFPLEELYRLCEIARELLdGEYAVGRVIARPFVGE-PGNFVRTANRHDYALKPPGP 218
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 240 TILQKLADeKGGNIHSIGKISDIYAGCGITQKTKATGIPALFEATKEAINEAGdNTIVFTNFVDFDSAYGHRRDVAGYAA 319
Cdd:COG1015  219 TLLDRLKE-AGGDVIAVGKISDIFAGRGITESVKTKGNADGMDKTLEAMDEAF-GGLIFTNLVDFDSLYGHRRDVAGYAK 296
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 320 ALEYFDGRINEIIDMMKEDDVLILTADHGCDPTWPGTDHTREHIPVIVYGQKVPAG-SLGRRDTFADIGQSLASYFGTSP 398
Cdd:COG1015  297 ALEEFDARLPELLAALRPDDLLIITADHGNDPTWPGTDHTREYVPLLVYGPGLKPGgNLGTRETFADIGATIADHFGVPP 376

                 ....*...
gi 880813002 399 MGHGTSFL 406
Cdd:COG1015  377 PGHGTSFL 384
PPM cd16009
Bacterial phosphopentomutase; Bacterial phosphopentomutases (PPMs) are alkaline phosphatase ...
2-405 0e+00

Bacterial phosphopentomutase; Bacterial phosphopentomutases (PPMs) are alkaline phosphatase superfamily members that interconvert alpha-D-ribose 5-phosphate (ribose 5-phosphate) and alpha-D-ribose 1-phosphate (ribose 1-phosphate). This reaction bridges glucose metabolism and RNA biosynthesis. PPM is a Mn(2+)-dependent enzyme and protein phosphorylation activates the enzyme.


Pssm-ID: 293733  Cd Length: 382  Bit Score: 572.47  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002   2 KRAFILVLDSFGIGETADADKFGDVGSDTMGHIADHCdqgladnadrkGPLTLPNLSKLGLAMAHKESTGrfapgmDADA 81
Cdd:cd16009    1 KRVILIVLDSFGIGAMPDAAKFGDEGANTLGHIAEAV-----------PGLNLPNLEKLGLGNIVGIEGG------PPKE 63
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002  82 EIIGAYGHAAELSSGKDTPSGHWEIAGVPVLFDWGYFTdkeNSFPKELTDRILERAGLSGfLGNCHSSGTEILDNLGEEH 161
Cdd:cd16009   64 NPIAAYGKMREASAGKDTTTGHWEIMGLKPKKPFPTFP---NGFPKELIDEFEKATGRKG-LGNKPASGTEIIKELGEEH 139
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 162 MKTGLPIFYTSADSVFQIACHEETFGLQNLLDLCQIAREEL-EDYNIGRVIARPFIGPGKGQFERTGNRRDLSVEPPAAT 240
Cdd:cd16009  140 LKTGAPIVYTSADSVFQIAAHEEVIPLEELYRICEIAREILdGEYKVGRVIARPFVGETGVYFKRTSNRHDYALVPPGKT 219
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 241 ILQKLAdEKGGNIHSIGKISDIYAGCGITQ----KTKATGIPALFEATKEAineagDNTIVFTNFVDFDSAYGHRRDVAG 316
Cdd:cd16009  220 VLDILK-EAGIPVIGIGKIADIFAGRGITEsihtKSNADGMEKTLEALKED-----FNGLIFTNLVDFDMLYGHRRDPEG 293
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 317 YAAALEYFDGRINEIIDMMKEDDVLILTADHGCDPTWPGTDHTREHIPVIVYGQKVPAGSLGRRDTFADIGQSLASYFGT 396
Cdd:cd16009  294 YAEALEEFDRRLPELLAKLKEDDLLIITADHGNDPTIGGTDHTREYVPLLVYGKGLKGVNLGTRETFADIGATIADNFGV 373

                 ....*....
gi 880813002 397 SPMGHGTSF 405
Cdd:cd16009  374 EPPENGTSF 382
deoB TIGR01696
phosphopentomutase; This protein is involved in the purine and pyrimidine salvage pathway. It ...
3-404 0e+00

phosphopentomutase; This protein is involved in the purine and pyrimidine salvage pathway. It catalyzes the conversion of D-ribose 1-phosphate to D-ribose 5-phosphate and the conversion of 2-deoxy-D-ribose 1-phosphate to 2-deoxy-D-ribose 5-phosphate. The seed members of this protein are characterized deoB proteins from E.Coli(SP:P07651) and Bacillus (SP:P46353). This model matches pfam01676 for Metalloenzyme superfamily. [Purines, pyrimidines, nucleosides, and nucleotides, Other]


Pssm-ID: 162494  Cd Length: 381  Bit Score: 537.94  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002    3 RAFILVLDSFGIGETADADKFGDVGSDTMGHIADHCDQgladnadrkgpLTLPNLSKLGLAMAHKestgrfAPGMDADAE 82
Cdd:TIGR01696   1 RVFLIVMDSVGIGEAPDAADFGDEGAHTLGHIAEACAK-----------LNLPNLTKLGLGKIHE------PAGVDGNEE 63
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002   83 IIGAYGHAAELSSGKDTPSGHWEIAGVPVLFDWGYFTdkeNSFPKELTDRILERAGLSgFLGNCHSSGTEILDNLGEEHM 162
Cdd:TIGR01696  64 PIAYYAKAHEASSGKDTMTGHWEIMGLPILFPFKVFP---NGFPQELLQKLEERAGRK-YLGNKPASGTVILDELGEEHM 139
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002  163 KTGLPIFYTSADSVFQIACHEETFGLQNLLDLCQIAREELED--YNIGRVIARPFIGPgKGQFERTGNRRDLSVEPPAAT 240
Cdd:TIGR01696 140 KTGKLIVYTSADSVLQIAAHEETFPLEELYEICEIARELTTDpkYNIGRIIARPFVGE-PGNFQRTGNRHDYALKPFAPT 218
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002  241 ILQKLADEkGGNIHSIGKISDIYAGCGITQKTKATGIPALFEATKEAINEAGDNtIVFTNFVDFDSAYGHRRDVAGYAAA 320
Cdd:TIGR01696 219 VLQKLKDE-GHDVISIGKIADIYDGEGITKKVRTTSNMDGMDATIKEMKEDFTG-ISFTNLVDFDALWGHRRDVAGYAAA 296
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002  321 LEYFDGRINEIIDMMKEDDVLILTADHGCDPTWPGTDHTREHIPVIVYGQKV-PAGSLGRRDTFADIGQSLASYFGTSPM 399
Cdd:TIGR01696 297 LELFDRRLPELFSLLREDDLLIITADHGNDPTWTGTDHTREYIPVLVYSPKVkPGHSLGHRETFADIGATIADNFGTSDP 376

                  ....*
gi 880813002  400 GHGTS 404
Cdd:TIGR01696 377 EYGKS 381
Metalloenzyme pfam01676
Metalloenzyme superfamily; This family includes phosphopentomutase and 2, ...
2-398 3.53e-71

Metalloenzyme superfamily; This family includes phosphopentomutase and 2,3-bisphosphoglycerate-independent phosphoglycerate mutase. This family is also related to pfam00245. The alignment contains the most conserved residues that are probably involved in metal binding and catalysis.


Pssm-ID: 396305  Cd Length: 410  Bit Score: 229.21  E-value: 3.53e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002    2 KRAFILVLDSFGIGETadadkfGDVGSDTMGHIADhcdqgladnadrkgpltLPNLSKLglamahKEstgrFAPGMDADA 81
Cdd:pfam01676   1 KKVVLIVLDGWGDRPA------EDLNAKTPLHIAK-----------------TPNMDKL------AK----EYPEQLIGA 47
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002   82 EIIgAYGHAAELSSGKDTpsGHWEIAGVPVLFDWGYFTDKENSFPKELTDRILERAGLSGFLGNCHSSGTEILDNLGEEH 161
Cdd:pfam01676  48 SGL-AVGLPEGQMGGSDV--GHLEIGGGRIVYQYLGRGDLEIAGGGFFLKPADLAARINFATGNGHLHGLGLDSGGGVHS 124
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002  162 MKTGLPIFYTSADSVFQIACHEETFGLQNLLDLCQIAREE--LEDYNIGRVIARPFIGPGKGQFERTGNRRDLSVEPPAA 239
Cdd:pfam01676 125 HIEHLLALIALAKEAGAIKVHLLGDGDDRPVGYILDGDAVitINFRFDRRRARILRLFLLDPDFFDRDRVRHDALHVPTK 204
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002  240 TILQKLADEKGGNIHSIGKISDIYAGCGITQKTKA---------------------------TGIP-------------- 278
Cdd:pfam01676 205 TLYELKLPSAGAFVPEEGKNTDGEVLEGHGLKQLRiaetekyahvtffwgggreppfpgeerYLIPspkvatydlqpems 284
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002  279 --ALFEATKEAINEAGDntIVFTNFVDFDSAyGHRRDVAGYAAALEYFDGRINEIIDMMKEDD-VLILTADHGCDPTWPG 355
Cdd:pfam01676 285 amEITDKLLEALKEKYD--FVFVNFANTDMV-GHTGDVEGKVKAIEAVDERLGELLDALEEDDgLLIITADHGNPEEMKD 361
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*....
gi 880813002  356 TDHTREHIPVIVYGQKVPAGSLG------RRDTFADIGQSLASYFGTSP 398
Cdd:pfam01676 362 TDHTREPVPILIYGKGVRPDQVLfgekfrERGGLADIAATILMLLGLKK 410
 
Name Accession Description Interval E-value
PRK05362 PRK05362
phosphopentomutase; Provisional
1-406 0e+00

phosphopentomutase; Provisional


Pssm-ID: 235430  Cd Length: 394  Bit Score: 722.29  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002   1 MKRAFILVLDSFGIGETADADKFGDVGSDTMGHIADHcdqgladnadRKGPLTLPNLSKLGLAMAHKEstgRFAPGMDAD 80
Cdd:PRK05362   1 MKRVFLIVLDSVGIGAAPDAAKFGDEGADTLGHIAEA----------RKGGLKLPNLAKLGLGNIATG---TPIAGVPAN 67
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002  81 AEIIGAYGHAAELSSGKDTPSGHWEIAGVPVLFDWGYFTdkeNSFPKELTDRILERAGLSGFLGNCHSSGTEILDNLGEE 160
Cdd:PRK05362  68 AEPIGYYGKAQEVSSGKDTPTGHWEIMGVPVLFPFGYFP---NGFPQELIDEIEERAGRPGILGNKHASGTEIIDELGEE 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 161 HMKTGLPIFYTSADSVFQIACHEETFGLQNLLDLCQIAREELED--YNIGRVIARPFIGpGKGQFERTGNRRDLSVEPPA 238
Cdd:PRK05362 145 HMKTGKPIVYTSADSVFQIAAHEEVFGLEELYRICEIAREILLDrpYNVGRVIARPFVG-EPGNFTRTGNRHDYALKPPA 223
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 239 ATILQKLaDEKGGNIHSIGKISDIYAGCGITQKTKATGIPALFEATKEAINEAGDNTIVFTNFVDFDSAYGHRRDVAGYA 318
Cdd:PRK05362 224 PTVLDKL-KEAGGEVIAVGKIADIFAGQGITEKVKTKSNMDGMDATIEEMKEAGDNGLVFTNLVDFDSLYGHRRDVAGYA 302
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 319 AALEYFDGRINEIIDMMKEDDVLILTADHGCDPTWPGTDHTREHIPVIVYGQKVPAGSLGRRDTFADIGQSLASYFGTSP 398
Cdd:PRK05362 303 AALEEFDARLPELLAALKEDDLLIITADHGNDPTWPGTDHTREYVPLLVYGPKFKGGSLGHRETFADIGATIADNFGVEP 382

                 ....*...
gi 880813002 399 MGHGTSFL 406
Cdd:PRK05362 383 MEYGKSFL 390
DeoB COG1015
Phosphopentomutase [Carbohydrate transport and metabolism];
1-406 0e+00

Phosphopentomutase [Carbohydrate transport and metabolism];


Pssm-ID: 440639  Cd Length: 385  Bit Score: 671.38  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002   1 MKRAFILVLDSFGIGETADADKFGDVGSDTMGHIADHcdqgladnadrKGPLTLPNLSKLGLAMAHKestgrfAPGMDAD 80
Cdd:COG1015    1 MKRAILIVLDSVGIGEAPDAAKFGDEGANTLGHIAEA-----------VGGLNLPNLARLGLGNIAP------LAGLPPV 63
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002  81 AEIIGAYGHAAELSSGKDTPSGHWEIAGVPVLFDWGYFTDkenSFPKELTDRILERAGlSGFLGNCHSSGTEILDNLGEE 160
Cdd:COG1015   64 EEPLGAYGKMAEVSAGKDTTTGHWEIAGLPVEFPFPTFPD---GFPEELIDEFEERTG-RGVLGNKPASGTEIIEELGEE 139
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 161 HMKTGLPIFYTSADSVFQIACHEETFGLQNLLDLCQIAREEL-EDYNIGRVIARPFIGPgKGQFERTGNRRDLSVEPPAA 239
Cdd:COG1015  140 HMRTGKPIVYTSADSVFQIAAHEEVFPLEELYRLCEIARELLdGEYAVGRVIARPFVGE-PGNFVRTANRHDYALKPPGP 218
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 240 TILQKLADeKGGNIHSIGKISDIYAGCGITQKTKATGIPALFEATKEAINEAGdNTIVFTNFVDFDSAYGHRRDVAGYAA 319
Cdd:COG1015  219 TLLDRLKE-AGGDVIAVGKISDIFAGRGITESVKTKGNADGMDKTLEAMDEAF-GGLIFTNLVDFDSLYGHRRDVAGYAK 296
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 320 ALEYFDGRINEIIDMMKEDDVLILTADHGCDPTWPGTDHTREHIPVIVYGQKVPAG-SLGRRDTFADIGQSLASYFGTSP 398
Cdd:COG1015  297 ALEEFDARLPELLAALRPDDLLIITADHGNDPTWPGTDHTREYVPLLVYGPGLKPGgNLGTRETFADIGATIADHFGVPP 376

                 ....*...
gi 880813002 399 MGHGTSFL 406
Cdd:COG1015  377 PGHGTSFL 384
PPM cd16009
Bacterial phosphopentomutase; Bacterial phosphopentomutases (PPMs) are alkaline phosphatase ...
2-405 0e+00

Bacterial phosphopentomutase; Bacterial phosphopentomutases (PPMs) are alkaline phosphatase superfamily members that interconvert alpha-D-ribose 5-phosphate (ribose 5-phosphate) and alpha-D-ribose 1-phosphate (ribose 1-phosphate). This reaction bridges glucose metabolism and RNA biosynthesis. PPM is a Mn(2+)-dependent enzyme and protein phosphorylation activates the enzyme.


Pssm-ID: 293733  Cd Length: 382  Bit Score: 572.47  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002   2 KRAFILVLDSFGIGETADADKFGDVGSDTMGHIADHCdqgladnadrkGPLTLPNLSKLGLAMAHKESTGrfapgmDADA 81
Cdd:cd16009    1 KRVILIVLDSFGIGAMPDAAKFGDEGANTLGHIAEAV-----------PGLNLPNLEKLGLGNIVGIEGG------PPKE 63
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002  82 EIIGAYGHAAELSSGKDTPSGHWEIAGVPVLFDWGYFTdkeNSFPKELTDRILERAGLSGfLGNCHSSGTEILDNLGEEH 161
Cdd:cd16009   64 NPIAAYGKMREASAGKDTTTGHWEIMGLKPKKPFPTFP---NGFPKELIDEFEKATGRKG-LGNKPASGTEIIKELGEEH 139
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 162 MKTGLPIFYTSADSVFQIACHEETFGLQNLLDLCQIAREEL-EDYNIGRVIARPFIGPGKGQFERTGNRRDLSVEPPAAT 240
Cdd:cd16009  140 LKTGAPIVYTSADSVFQIAAHEEVIPLEELYRICEIAREILdGEYKVGRVIARPFVGETGVYFKRTSNRHDYALVPPGKT 219
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 241 ILQKLAdEKGGNIHSIGKISDIYAGCGITQ----KTKATGIPALFEATKEAineagDNTIVFTNFVDFDSAYGHRRDVAG 316
Cdd:cd16009  220 VLDILK-EAGIPVIGIGKIADIFAGRGITEsihtKSNADGMEKTLEALKED-----FNGLIFTNLVDFDMLYGHRRDPEG 293
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 317 YAAALEYFDGRINEIIDMMKEDDVLILTADHGCDPTWPGTDHTREHIPVIVYGQKVPAGSLGRRDTFADIGQSLASYFGT 396
Cdd:cd16009  294 YAEALEEFDRRLPELLAKLKEDDLLIITADHGNDPTIGGTDHTREYVPLLVYGKGLKGVNLGTRETFADIGATIADNFGV 373

                 ....*....
gi 880813002 397 SPMGHGTSF 405
Cdd:cd16009  374 EPPENGTSF 382
deoB TIGR01696
phosphopentomutase; This protein is involved in the purine and pyrimidine salvage pathway. It ...
3-404 0e+00

phosphopentomutase; This protein is involved in the purine and pyrimidine salvage pathway. It catalyzes the conversion of D-ribose 1-phosphate to D-ribose 5-phosphate and the conversion of 2-deoxy-D-ribose 1-phosphate to 2-deoxy-D-ribose 5-phosphate. The seed members of this protein are characterized deoB proteins from E.Coli(SP:P07651) and Bacillus (SP:P46353). This model matches pfam01676 for Metalloenzyme superfamily. [Purines, pyrimidines, nucleosides, and nucleotides, Other]


Pssm-ID: 162494  Cd Length: 381  Bit Score: 537.94  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002    3 RAFILVLDSFGIGETADADKFGDVGSDTMGHIADHCDQgladnadrkgpLTLPNLSKLGLAMAHKestgrfAPGMDADAE 82
Cdd:TIGR01696   1 RVFLIVMDSVGIGEAPDAADFGDEGAHTLGHIAEACAK-----------LNLPNLTKLGLGKIHE------PAGVDGNEE 63
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002   83 IIGAYGHAAELSSGKDTPSGHWEIAGVPVLFDWGYFTdkeNSFPKELTDRILERAGLSgFLGNCHSSGTEILDNLGEEHM 162
Cdd:TIGR01696  64 PIAYYAKAHEASSGKDTMTGHWEIMGLPILFPFKVFP---NGFPQELLQKLEERAGRK-YLGNKPASGTVILDELGEEHM 139
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002  163 KTGLPIFYTSADSVFQIACHEETFGLQNLLDLCQIAREELED--YNIGRVIARPFIGPgKGQFERTGNRRDLSVEPPAAT 240
Cdd:TIGR01696 140 KTGKLIVYTSADSVLQIAAHEETFPLEELYEICEIARELTTDpkYNIGRIIARPFVGE-PGNFQRTGNRHDYALKPFAPT 218
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002  241 ILQKLADEkGGNIHSIGKISDIYAGCGITQKTKATGIPALFEATKEAINEAGDNtIVFTNFVDFDSAYGHRRDVAGYAAA 320
Cdd:TIGR01696 219 VLQKLKDE-GHDVISIGKIADIYDGEGITKKVRTTSNMDGMDATIKEMKEDFTG-ISFTNLVDFDALWGHRRDVAGYAAA 296
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002  321 LEYFDGRINEIIDMMKEDDVLILTADHGCDPTWPGTDHTREHIPVIVYGQKV-PAGSLGRRDTFADIGQSLASYFGTSPM 399
Cdd:TIGR01696 297 LELFDRRLPELFSLLREDDLLIITADHGNDPTWTGTDHTREYIPVLVYSPKVkPGHSLGHRETFADIGATIADNFGTSDP 376

                  ....*
gi 880813002  400 GHGTS 404
Cdd:TIGR01696 377 EYGKS 381
Metalloenzyme pfam01676
Metalloenzyme superfamily; This family includes phosphopentomutase and 2, ...
2-398 3.53e-71

Metalloenzyme superfamily; This family includes phosphopentomutase and 2,3-bisphosphoglycerate-independent phosphoglycerate mutase. This family is also related to pfam00245. The alignment contains the most conserved residues that are probably involved in metal binding and catalysis.


Pssm-ID: 396305  Cd Length: 410  Bit Score: 229.21  E-value: 3.53e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002    2 KRAFILVLDSFGIGETadadkfGDVGSDTMGHIADhcdqgladnadrkgpltLPNLSKLglamahKEstgrFAPGMDADA 81
Cdd:pfam01676   1 KKVVLIVLDGWGDRPA------EDLNAKTPLHIAK-----------------TPNMDKL------AK----EYPEQLIGA 47
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002   82 EIIgAYGHAAELSSGKDTpsGHWEIAGVPVLFDWGYFTDKENSFPKELTDRILERAGLSGFLGNCHSSGTEILDNLGEEH 161
Cdd:pfam01676  48 SGL-AVGLPEGQMGGSDV--GHLEIGGGRIVYQYLGRGDLEIAGGGFFLKPADLAARINFATGNGHLHGLGLDSGGGVHS 124
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002  162 MKTGLPIFYTSADSVFQIACHEETFGLQNLLDLCQIAREE--LEDYNIGRVIARPFIGPGKGQFERTGNRRDLSVEPPAA 239
Cdd:pfam01676 125 HIEHLLALIALAKEAGAIKVHLLGDGDDRPVGYILDGDAVitINFRFDRRRARILRLFLLDPDFFDRDRVRHDALHVPTK 204
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002  240 TILQKLADEKGGNIHSIGKISDIYAGCGITQKTKA---------------------------TGIP-------------- 278
Cdd:pfam01676 205 TLYELKLPSAGAFVPEEGKNTDGEVLEGHGLKQLRiaetekyahvtffwgggreppfpgeerYLIPspkvatydlqpems 284
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002  279 --ALFEATKEAINEAGDntIVFTNFVDFDSAyGHRRDVAGYAAALEYFDGRINEIIDMMKEDD-VLILTADHGCDPTWPG 355
Cdd:pfam01676 285 amEITDKLLEALKEKYD--FVFVNFANTDMV-GHTGDVEGKVKAIEAVDERLGELLDALEEDDgLLIITADHGNPEEMKD 361
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*....
gi 880813002  356 TDHTREHIPVIVYGQKVPAGSLG------RRDTFADIGQSLASYFGTSP 398
Cdd:pfam01676 362 TDHTREPVPILIYGKGVRPDQVLfgekfrERGGLADIAATILMLLGLKK 410
PRK12383 PRK12383
putative mutase; Provisional
1-406 1.30e-48

putative mutase; Provisional


Pssm-ID: 237085  Cd Length: 406  Bit Score: 170.15  E-value: 1.30e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002   1 MKRAFILVLDSFGIGETADADKF--GDVGSDTMGHIADHCDQgladnadrkgpLTLPNLSKLGLAMAHKESTGRFAPGMD 78
Cdd:PRK12383   1 MARFVVLVIDSFGVGAMKDVTLVrpQDAGANTCGHILSQLPH-----------LQLPTLEKLGLINALGYAPGDMQPSPS 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002  79 AdaeiigAYGHAAELSSGKDTPSGHWEIAG----VPVLFDwgyFTDKENSFPKELTDrileraglSGFLGNCHSSGTEIL 154
Cdd:PRK12383  70 A------TWGVAELQHEGADTFMGHQEIMGtrplPPLRMP---FSDVIDRVEQALES--------AGYQVERRGDGLQFL 132
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 155 ---------DNL----GEEHMKTGlPIFYTSADSVFQIA----CHEET-----FG-----LQNLLDlcqiAREELEDYNI 207
Cdd:PRK12383 133 lvnqavaigDNLeadlGQVYNVTA-NLSVISFDDALKIGrivrEQVQVgrvivFGglltdSQRILD----AAESKEGRFI 207
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 208 GrvIARPfigpgKGQFERTGNR-RDLSVEPPAATILQKLADEKGGNIHSIGKISDI--------YAGCGITQKtkatgip 278
Cdd:PRK12383 208 G--INAP-----KSGVYDNGYQvVHLGYGVDPKVQVPQKLYEAGVPVVLVGKVADIvnnpygvsWQNLVDTQR------- 273
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 279 aLFEATKEAINEAGDNTIvFTNFVDFDSAyGHRRDVAGYAAALEYFDGRINEIIDMMKEDDVLILTADHGCDPTWPGTDH 358
Cdd:PRK12383 274 -VMDITLDEFNTHPTAFI-CTNIQETDLA-GHAEDVARYAERLEVVDRNLARLLEAMTPDDCLVVMADHGNDPTIGHSHH 350
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*...
gi 880813002 359 TREHIPVIVYGQKVPAGSLGRRDTFADIGQSLASYFGTSPMGHGTSFL 406
Cdd:PRK12383 351 TREVVPLLVYQKGLQATQLGVRTTLSDVGATVCEFFGAPPPQNGRSFL 398
ALP_like cd00016
alkaline phosphatases and sulfatases; This family includes alkaline phosphatases and ...
268-375 1.17e-08

alkaline phosphatases and sulfatases; This family includes alkaline phosphatases and sulfatases. Alkaline phosphatases are non-specific phosphomonoesterases that catalyze the hydrolysis reaction via a phosphoseryl intermediate to produce inorganic phosphate and the corresponding alcohol, optimally at high pH. Alkaline phosphatase exists as a dimer, each monomer binding 2 zinc atoms and one magnesium atom, which are essential for enzymatic activity. Sulfatases catalyze the hydrolysis of sulfate esters from wide range of substrates, including steroids, carbohydrates and proteins. Sulfate esters may be formed from various alcohols and amines. The biological roles of sulfatase includes the cycling of sulfur in the environment, in the degradation of sulfated glycosaminoglycans and glycolipids in the lysosome, and in remodeling sulfated glycosaminoglycans in the extracellular space. Both alkaline phosphatase and sulfatase are essential for human metabolism. Deficiency of individual enzyme cause genetic diseases.


Pssm-ID: 293732 [Multi-domain]  Cd Length: 237  Bit Score: 55.12  E-value: 1.17e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 268 ITQKTKATGIPALFEATKEAINEAGDntIVFTNFVDFDSA-YGHRRDVAGYAAALEYFDGRINEIID-----MMKEDDVL 341
Cdd:cd00016   96 LKQAGYRTGVIGLLKAIDETSKEKPF--VLFLHFDGPDGPgHAYGPNTPEYYDAVEEIDERIGKVLDalkkaGDADDTVI 173
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 880813002 342 ILTADHGCDP----------TWPGTDHTREHIPVIVYGQKVPAG 375
Cdd:cd00016  174 IVTADHGGIDkghggdpkadGKADKSHTGMRVPFIAYGPGVKKG 217
SGSH cd16027
N-sulfoglucosamine sulfohydrolase (SGSH; sulfamidase); N-sulfoglucosamine sulfohydrolase (SGSH) ...
311-406 1.06e-07

N-sulfoglucosamine sulfohydrolase (SGSH; sulfamidase); N-sulfoglucosamine sulfohydrolase (SGSH) belongs to the sulfatase family and catalyses the cleavage of N-linked sulfate groups from the GAGs heparin sulfate and heparin. The active site is characterized by the amino-acid sequence motif C(X)PSR that is highly conserved among most sulfatases. The cysteine residue is post-translationally converted to a formylglycine (FGly) residue, which is crucial for the catalytic process. Loss of function of SGSH results a disease called mucopolysaccharidosis type IIIA (Sanfilippo A syndrome), a fatal childhood-onset neurodegenerative disease with mild facial, visceral and skeletal abnormalities.


Pssm-ID: 293751 [Multi-domain]  Cd Length: 373  Bit Score: 53.28  E-value: 1.06e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 311 RRDVAGYAAALEYFDGRINEIIDMMKEDDVL-----ILTADHG-------CDPTWPGTdhtreHIPVIVYG-QKVPAGSl 377
Cdd:cd16027  185 REDLADYYDEIERLDQQVGEILDELEEDGLLdntivIFTSDHGmpfprakGTLYDSGL-----RVPLIVRWpGKIKPGS- 258
                         90       100       110
                 ....*....|....*....|....*....|....*
gi 880813002 378 gRRD---TFADIGQSLASYFGTSP---MgHGTSFL 406
Cdd:cd16027  259 -VSDalvSFIDLAPTLLDLAGIEPpeyL-QGRSFL 291
iPGM_like cd16011
uncharacterized subfamily of alkaline phosphatase, homologous to 2 3 bisphosphoglycerate ...
305-381 5.30e-07

uncharacterized subfamily of alkaline phosphatase, homologous to 2 3 bisphosphoglycerate independent phosphoglycerate mutase (iPGM) and bacterial phosphopentomutases; The proteins in this subfamily of alkaline phosphatase are not characterized. Their sequences show similarity to 2 3 bisphosphoglycerate independent phosphoglycerate mutase (iPGM) which catalyzes the interconversion of 3-phosphoglycerate to 2-phosphoglycerate, and to bacterial phosphopentomutases (PPMs) which interconvert alpha-D-ribose 5-phosphate (ribose 5-phosphate) and alpha-D-ribose 1-phosphate (ribose 1-phosphate).


Pssm-ID: 293735  Cd Length: 368  Bit Score: 51.32  E-value: 5.30e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 305 DSAyGHRRDVAGYAAALEYFDGRINEIID--MMKEDDVLILTADHgcdPT-WPGTDHTREHIPVIVYGQKVPAGSLGRRD 381
Cdd:cd16011  268 DEA-GHDGDPEAKVKAIERIDKAIVGPLLelLDGEDFVIVVTPDH---STpCSLKTHSGDPVPFLIYGPGVRRDGVTRFD 343
sulfatase_like cd16037
uncharacterized sulfatase subfamily; Sulfatases catalyze the hydrolysis of sulfate esters from ...
311-406 1.94e-05

uncharacterized sulfatase subfamily; Sulfatases catalyze the hydrolysis of sulfate esters from wide range of substrates, including steroids, carbohydrates and proteins. Sulfate esters may be formed from various alcohols and amines. The biological roles of sulfatase includes the cycling of sulfur in the environment, in the degradation of sulfated glycosaminoglycans and glycolipids in the lysosome, and in remodeling sulfated glycosaminoglycans in the extracellular space. The sulfatases are essential for human metabolism. At least eight human monogenic diseases are caused by the deficiency of individual sulfatases.


Pssm-ID: 293760 [Multi-domain]  Cd Length: 321  Bit Score: 46.00  E-value: 1.94e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 311 RRDVAGYAAALEYFDGRINEIIDMMKE----DDVLIL-TADHGcdptwpgtDHTREH--------------IPVIVYGQK 371
Cdd:cd16037  158 RRARAAYYGLVEFLDENIGRVLDALEElgllDNTLIIyTSDHG--------DMLGERglwgkstmyeesvrVPMIISGPG 229
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 880813002 372 VPAGslGRRDTFA---DIGQSLASYFGTSPMGH--GTSFL 406
Cdd:cd16037  230 IPAG--KRVKTPVslvDLAPTILEAAGAPPPPDldGRSLL 267
AtaC COG1524
c-di-AMP phosphodiesterase AtaC or nucleotide pyrophosphatase, AlkP superfamily [Signal ...
280-348 4.57e-05

c-di-AMP phosphodiesterase AtaC or nucleotide pyrophosphatase, AlkP superfamily [Signal transduction mechanisms];


Pssm-ID: 441133 [Multi-domain]  Cd Length: 370  Bit Score: 45.12  E-value: 4.57e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 880813002 280 LFEATKEAInEAGDNTIVFTNFVDFDSAyGHRR--DVAGYAAALEYFDGRINEIIDMMK-----EDDVLILTADHG 348
Cdd:COG1524  170 IAAAALELL-REGRPDLLLVYLPDLDYA-GHRYgpDSPEYRAALREVDAALGRLLDALKarglyEGTLVIVTADHG 243
sulfatase_like cd16148
uncharacterized sulfatase subfamily; Sulfatases catalyze the hydrolysis of sulfate esters from ...
317-406 1.25e-04

uncharacterized sulfatase subfamily; Sulfatases catalyze the hydrolysis of sulfate esters from wide range of substrates, including steroids, carbohydrates and proteins. Sulfate esters may be formed from various alcohols and amines. The biological roles of sulfatase includes the cycling of sulfur in the environment, in the degradation of sulfated glycosaminoglycans and glycolipids in the lysosome, and in remodeling sulfated glycosaminoglycans in the extracellular space. The sulfatases are essential for human metabolism. At least eight human monogenic diseases are caused by the deficiency of individual sulfatases.


Pssm-ID: 293767 [Multi-domain]  Cd Length: 271  Bit Score: 43.31  E-value: 1.25e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 317 YAAALEYFDGRINEIIDMMKE----DD-VLILTADHG---------CDPTWPGTDHTReHIPVIVYGQKVPAGslGRRDT 382
Cdd:cd16148  165 YDAEVRYVDEQIGRLLDKLKElgllEDtLVIVTSDHGeefgehglyWGHGSNLYDEQL-HVPLIIRWPGKEPG--KRVDA 241
                         90       100
                 ....*....|....*....|....*....
gi 880813002 383 F---ADIGQSLASYFGTSPMG--HGTSFL 406
Cdd:cd16148  242 LvshIDIAPTLLDLLGVEPPDysDGRSLL 270
PRK04024 PRK04024
2,3-bisphosphoglycerate-independent phosphoglycerate mutase;
285-372 2.49e-04

2,3-bisphosphoglycerate-independent phosphoglycerate mutase;


Pssm-ID: 235203  Cd Length: 412  Bit Score: 42.98  E-value: 2.49e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 285 KEAINEAGDNTIVFTNFVDFDSAyGHRRDVAGYAAALEYFDGRINEIIDMMKEDDVLI-LTADHgcdpTWPGT--DHTRE 361
Cdd:PRK04024 285 KAAVELLKEYDFVLLNIKGTDEA-GHDGDFEGKVEVIEKIDKMLGYILDNLDLDEVYIaVTGDH----STPVEvkDHSGD 359
                         90
                 ....*....|.
gi 880813002 362 HIPVIVYGQKV 372
Cdd:PRK04024 360 PVPILIYGPGV 370
ALP cd16012
Alkaline Phosphatase; Alkaline phosphatases are non-specific membrane-bound ...
273-369 2.14e-03

Alkaline Phosphatase; Alkaline phosphatases are non-specific membrane-bound phosphomonoesterases that catalyze the hydrolysis reaction via a phosphoseryl intermediate to produce inorganic phosphate and the corresponding alcohol, optimally at high pH. Alkaline phosphatase exists as a dimer, each monomer binding 2 zinc atoms and one magnesium atom, which are essential for enzymatic activity. Mammalian alkaline phosphatase is divided into four isozymes depending upon the site of tissue expression. They are Intestinal ALP, Placental ALP, Germ cell ALP and tissue nonspecific alkaline phosphatase or liver/bone/kidney (L/B/K) ALP.


Pssm-ID: 293736  Cd Length: 283  Bit Score: 39.72  E-value: 2.14e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 880813002 273 KATGIPALFEATKEAIN-------------EAGDntIvftnfvdfDSAyGHRRDVAGYAAALEYFDGRINEIIDMMKEDD 339
Cdd:cd16012  166 DETDEPSLAEMTEKAIEvlsknpkgfflmvEGGR--I--------DWA-GHANDAARAIEETLAFDKAVKVALDFAKKDG 234
                         90       100       110
                 ....*....|....*....|....*....|..
gi 880813002 340 --VLILTADHgcdptwpGTDHTREHIPVIVYG 369
Cdd:cd16012  235 dtLVIVTADH-------ETGHTGEDVPVFAYG 259
Enpp cd16018
Ectonucleotide pyrophosphatase/phosphodiesterase, also called autotaxin; Ecto-nucleotide ...
301-348 3.24e-03

Ectonucleotide pyrophosphatase/phosphodiesterase, also called autotaxin; Ecto-nucleotide pyrophosphatases/phosphodiesterases (ENPPs) hydrolyze 5'-phosphodiester bonds in nucleotides and their derivatives, resulting in the release of 5'-nucleotide monophosphates. ENPPs have multiple physiological roles, including nucleotide recycling, modulation of purinergic receptor signaling, regulation of extracellular pyrophosphate levels, stimulation of cell motility, and possible roles in regulation of insulin receptor (IR) signaling and activity of ecto-kinases. The eukaryotic ENPP family contains at least five members that have different tissue distribution and physiological roles.


Pssm-ID: 293742 [Multi-domain]  Cd Length: 267  Bit Score: 39.11  E-value: 3.24e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 880813002 301 FVDFDSAyGHR--RDVAGYAAALEYFDGRINEIIDMMKE----DDV-LILTADHG 348
Cdd:cd16018  164 FEEPDSA-GHKygPDSPEVNEALKRVDRRLGYLIEALKErgllDDTnIIVVSDHG 217
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH