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Conserved domains on  [gi|881014556|ref|WP_048735265|]
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MULTISPECIES: TIGR02611 family protein [Corynebacterium]

Protein Classification

TIGR02611 family protein( domain architecture ID 10021165)

TIGR02611 family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
TIGR02611 TIGR02611
TIGR02611 family protein; Members of this family are Actinobacterial putative proteins of ...
 5-125 9.62e-41

TIGR02611 family protein; Members of this family are Actinobacterial putative proteins of about 150 amino acids in length with three apparent transmembrane helix and an unusual motif with consensus sequence PGPGW. [Hypothetical proteins, Conserved]


:

Pssm-ID: 131660  Cd Length: 121  Bit Score: 131.81  E-value: 9.62e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 881014556    5 VHRLMDRMQIRHAHMRNTWYGPVLSPVLLVAGFALLIVGIIILPTPAPGWLCIFVALGILSLVHPPTRRLNIWLAAKLDA 84
Cdd:TIGR02611   1 VEDALERLQDEHVHAKRRAYGFVVRPLVLVVGWVVLIVGIITIPLPGPGWLTIFIGLAILSLEFVWAQRLLRWGVRKYDE 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 881014556   85 FYAWYAERHVAMKATLFLLLMAFMAAVMGSVYYFMAPDDWP 125
Cdd:TIGR02611  81 FFAWYADQHVRVRNLLLGSLIVVIWAVLAGTYLWMWGLGMP 121
 
Name Accession Description Interval E-value
TIGR02611 TIGR02611
TIGR02611 family protein; Members of this family are Actinobacterial putative proteins of ...
 5-125 9.62e-41

TIGR02611 family protein; Members of this family are Actinobacterial putative proteins of about 150 amino acids in length with three apparent transmembrane helix and an unusual motif with consensus sequence PGPGW. [Hypothetical proteins, Conserved]


Pssm-ID: 131660  Cd Length: 121  Bit Score: 131.81  E-value: 9.62e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 881014556    5 VHRLMDRMQIRHAHMRNTWYGPVLSPVLLVAGFALLIVGIIILPTPAPGWLCIFVALGILSLVHPPTRRLNIWLAAKLDA 84
Cdd:TIGR02611   1 VEDALERLQDEHVHAKRRAYGFVVRPLVLVVGWVVLIVGIITIPLPGPGWLTIFIGLAILSLEFVWAQRLLRWGVRKYDE 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 881014556   85 FYAWYAERHVAMKATLFLLLMAFMAAVMGSVYYFMAPDDWP 125
Cdd:TIGR02611  81 FFAWYADQHVRVRNLLLGSLIVVIWAVLAGTYLWMWGLGMP 121
PGPGW pfam09656
Putative transmembrane protein (PGPGW); Proteins in this entry are putative Actinobacterial ...
 29-81 1.41e-15

Putative transmembrane protein (PGPGW); Proteins in this entry are putative Actinobacterial proteins of about 150 amino acids in length, with three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.


Pssm-ID: 430738  Cd Length: 53  Bit Score: 65.75  E-value: 1.41e-15
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 881014556   29 SPVLLVAGFALLIVGIIILPTPAPGWLCIFVALGILSLVHPPTRRLNIWLAAK 81
Cdd:pfam09656   1 RPLVLVLGWVVVVVGIIMIPLPGPGWLVVFLGLGILSTEFVWARRLLEWLRRR 53
 
Name Accession Description Interval E-value
TIGR02611 TIGR02611
TIGR02611 family protein; Members of this family are Actinobacterial putative proteins of ...
 5-125 9.62e-41

TIGR02611 family protein; Members of this family are Actinobacterial putative proteins of about 150 amino acids in length with three apparent transmembrane helix and an unusual motif with consensus sequence PGPGW. [Hypothetical proteins, Conserved]


Pssm-ID: 131660  Cd Length: 121  Bit Score: 131.81  E-value: 9.62e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 881014556    5 VHRLMDRMQIRHAHMRNTWYGPVLSPVLLVAGFALLIVGIIILPTPAPGWLCIFVALGILSLVHPPTRRLNIWLAAKLDA 84
Cdd:TIGR02611   1 VEDALERLQDEHVHAKRRAYGFVVRPLVLVVGWVVLIVGIITIPLPGPGWLTIFIGLAILSLEFVWAQRLLRWGVRKYDE 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 881014556   85 FYAWYAERHVAMKATLFLLLMAFMAAVMGSVYYFMAPDDWP 125
Cdd:TIGR02611  81 FFAWYADQHVRVRNLLLGSLIVVIWAVLAGTYLWMWGLGMP 121
PGPGW pfam09656
Putative transmembrane protein (PGPGW); Proteins in this entry are putative Actinobacterial ...
 29-81 1.41e-15

Putative transmembrane protein (PGPGW); Proteins in this entry are putative Actinobacterial proteins of about 150 amino acids in length, with three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.


Pssm-ID: 430738  Cd Length: 53  Bit Score: 65.75  E-value: 1.41e-15
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 881014556   29 SPVLLVAGFALLIVGIIILPTPAPGWLCIFVALGILSLVHPPTRRLNIWLAAK 81
Cdd:pfam09656   1 RPLVLVLGWVVVVVGIIMIPLPGPGWLVVFLGLGILSTEFVWARRLLEWLRRR 53
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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