NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|893691208|ref|WP_048927980|]
View 

MULTISPECIES: glycoside hydrolase family 172 protein [Parabacteroides]

Protein Classification

glycoside hydrolase family 172 protein( domain architecture ID 10567709)

glycoside hydrolase family 172 protein such as difructose dianhydride I synthase/hydrolase from Bifidobacterium dentium (alpha-D-fructofuranosidase and difructose dianhydride I synthase/hydrolase from Bifidobacterium dentium [alphaFFase1]), which is an enzyme with alpha-D-fructofuranosidase and alpha-D-arabinofuranosidase activities and an anomer-retaining manner

CATH:  2.60.120.1390
CAZY:  GH172
PubMed:  34688653

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF2961 pfam11175
Protein of unknown function (DUF2961); This family of proteins has no known function.
 126-371 3.66e-127

Protein of unknown function (DUF2961); This family of proteins has no known function.


:

Pssm-ID: 463235  Cd Length: 234  Bit Score: 365.36  E-value: 3.66e-127
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893691208  126 ILRMYWDDEKEPSVECPVGDFFASAFNEYAQLSSLAVCV-NPGSAFNCYWKMPFRKKARITLENINNAEEMRLYYQINYT 204
Cdd:pfam11175   3 VLRIYWDGEETPSVEAPLGDFFGSGWGEYTPVRSLPVTVdNPGGGFNCYWPMPFRKSARITLENLSDEPVNGLYYYIDYE 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893691208  205 LTE-VPEDEGYFHAQFRRSNP--TQGSIHTLVDgIKGKGQYVGTYLAWRVNDNCWWGEGEIKFYMDGDkEYPTICGTGTE 281
Cdd:pfam11175  83 LTDkLPEDSGYFHAQWRRENPntTGGRDYTILD-VKGRGHYVGVYLAVGNLNNGWWGEGDEKFFIDGD-WFPTIHGTGTE 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893691208  282 DYFCGSYNFEnqkthQYQEFTTPYAGMHQVirPDGLYRavtaFGLYRWHILDPVRFEKDLKVTIQdlgwrHDGRYNNQKS 361
Cdd:pfam11175 161 DYFGGAWYFE-----DYGTFSTPYHGLPQV--EDSQGR----TGAYRFHILDPIRFEKSLKVTIE-----HGHGNNPLSD 224

                         250
                  ....*....|
gi 893691208  362 DISSTTFWYQ 371
Cdd:pfam11175 225 DYSSVAYWYQ 234
 
Name Accession Description Interval E-value
DUF2961 pfam11175
Protein of unknown function (DUF2961); This family of proteins has no known function.
 126-371 3.66e-127

Protein of unknown function (DUF2961); This family of proteins has no known function.


Pssm-ID: 463235  Cd Length: 234  Bit Score: 365.36  E-value: 3.66e-127
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893691208  126 ILRMYWDDEKEPSVECPVGDFFASAFNEYAQLSSLAVCV-NPGSAFNCYWKMPFRKKARITLENINNAEEMRLYYQINYT 204
Cdd:pfam11175   3 VLRIYWDGEETPSVEAPLGDFFGSGWGEYTPVRSLPVTVdNPGGGFNCYWPMPFRKSARITLENLSDEPVNGLYYYIDYE 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893691208  205 LTE-VPEDEGYFHAQFRRSNP--TQGSIHTLVDgIKGKGQYVGTYLAWRVNDNCWWGEGEIKFYMDGDkEYPTICGTGTE 281
Cdd:pfam11175  83 LTDkLPEDSGYFHAQWRRENPntTGGRDYTILD-VKGRGHYVGVYLAVGNLNNGWWGEGDEKFFIDGD-WFPTIHGTGTE 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893691208  282 DYFCGSYNFEnqkthQYQEFTTPYAGMHQVirPDGLYRavtaFGLYRWHILDPVRFEKDLKVTIQdlgwrHDGRYNNQKS 361
Cdd:pfam11175 161 DYFGGAWYFE-----DYGTFSTPYHGLPQV--EDSQGR----TGAYRFHILDPIRFEKSLKVTIE-----HGHGNNPLSD 224

                         250
                  ....*....|
gi 893691208  362 DISSTTFWYQ 371
Cdd:pfam11175 225 DYSSVAYWYQ 234
 
Name Accession Description Interval E-value
DUF2961 pfam11175
Protein of unknown function (DUF2961); This family of proteins has no known function.
 126-371 3.66e-127

Protein of unknown function (DUF2961); This family of proteins has no known function.


Pssm-ID: 463235  Cd Length: 234  Bit Score: 365.36  E-value: 3.66e-127
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893691208  126 ILRMYWDDEKEPSVECPVGDFFASAFNEYAQLSSLAVCV-NPGSAFNCYWKMPFRKKARITLENINNAEEMRLYYQINYT 204
Cdd:pfam11175   3 VLRIYWDGEETPSVEAPLGDFFGSGWGEYTPVRSLPVTVdNPGGGFNCYWPMPFRKSARITLENLSDEPVNGLYYYIDYE 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893691208  205 LTE-VPEDEGYFHAQFRRSNP--TQGSIHTLVDgIKGKGQYVGTYLAWRVNDNCWWGEGEIKFYMDGDkEYPTICGTGTE 281
Cdd:pfam11175  83 LTDkLPEDSGYFHAQWRRENPntTGGRDYTILD-VKGRGHYVGVYLAVGNLNNGWWGEGDEKFFIDGD-WFPTIHGTGTE 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893691208  282 DYFCGSYNFEnqkthQYQEFTTPYAGMHQVirPDGLYRavtaFGLYRWHILDPVRFEKDLKVTIQdlgwrHDGRYNNQKS 361
Cdd:pfam11175 161 DYFGGAWYFE-----DYGTFSTPYHGLPQV--EDSQGR----TGAYRFHILDPIRFEKSLKVTIE-----HGHGNNPLSD 224

                         250
                  ....*....|
gi 893691208  362 DISSTTFWYQ 371
Cdd:pfam11175 225 DYSSVAYWYQ 234
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH