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Conserved domains on  [gi|895971649|ref|WP_049050081|]
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MULTISPECIES: phosphate ABC transporter permease PstA [Corynebacterium]

Protein Classification

PstA family ABC transporter permease( domain architecture ID 11426443)

PstA family ABC transporter permease is the transmembrane subunit (TM) found in periplasmic binding protein (PBP)-dependent ATP-binding cassette (ABC) transporters; similar to phosphate transport system permease protein PstA

Gene Ontology:  GO:0140359|GO:0042626|GO:0043190|GO:0016020
PubMed:  25750732|24638992|18535149|17723295
TCDB:  3.A.1

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PstA COG0581
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 43-305 2.55e-100

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


:

Pssm-ID: 440346 [Multi-domain]  Cd Length: 259  Bit Score: 295.02  E-value: 2.55e-100
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  43 LALVPLLWVLIKVLSEGLPAiLNPDWWVYDMvgqPRNKAGGGAVHAIIGTLMQVVVTSALSIPIGVFTAIYLVEYSRGGF 122
Cdd:COG0581    1 LALLPLVWILGTVLVKGLPA-LSWEFLTSSP---SPGPEGGGILPAIVGTLLLVLLATLIAVPLGVLAAIYLAEYARGGR 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649 123 LGRITTFMVDILTGVPSIVAALFVYAMWITMFGFERSGFAVSLALVLLMVPIIVRNAEEMLRVVPMDLREASYALGVPKW 202
Cdd:COG0581   77 LARLIRFAIDVLAGVPSIVYGLFGYALFVLTLGLGFSLLAGALALALLMLPVVIRTTEEALRLVPNSLREASYALGATKW 156

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649 203 KTIVKIVLPTALSGIVTGIMLAVARVMGESAPVLILVGSTTKINWNPFEGGqQSLPLYMVDLYGAGSNEFVlERLWGSAL 282
Cdd:COG0581  157 QTIRKVVLPAALPGILTGVILAIARAAGETAPLLFTAGVSPFLPLSLFDPF-ATLPVHIYNLASSPYPAAQ-ELAWAAAL 234

                        250       260
                 ....*....|....*....|...
gi 895971649 283 TLVLLVAILMIGARLISKRYSVK 305
Cdd:COG0581  235 VLLLLVLLLNLLARLLRRRFRKK 257
 
Name Accession Description Interval E-value
PstA COG0581
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 43-305 2.55e-100

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440346 [Multi-domain]  Cd Length: 259  Bit Score: 295.02  E-value: 2.55e-100
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  43 LALVPLLWVLIKVLSEGLPAiLNPDWWVYDMvgqPRNKAGGGAVHAIIGTLMQVVVTSALSIPIGVFTAIYLVEYSRGGF 122
Cdd:COG0581    1 LALLPLVWILGTVLVKGLPA-LSWEFLTSSP---SPGPEGGGILPAIVGTLLLVLLATLIAVPLGVLAAIYLAEYARGGR 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649 123 LGRITTFMVDILTGVPSIVAALFVYAMWITMFGFERSGFAVSLALVLLMVPIIVRNAEEMLRVVPMDLREASYALGVPKW 202
Cdd:COG0581   77 LARLIRFAIDVLAGVPSIVYGLFGYALFVLTLGLGFSLLAGALALALLMLPVVIRTTEEALRLVPNSLREASYALGATKW 156

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649 203 KTIVKIVLPTALSGIVTGIMLAVARVMGESAPVLILVGSTTKINWNPFEGGqQSLPLYMVDLYGAGSNEFVlERLWGSAL 282
Cdd:COG0581  157 QTIRKVVLPAALPGILTGVILAIARAAGETAPLLFTAGVSPFLPLSLFDPF-ATLPVHIYNLASSPYPAAQ-ELAWAAAL 234

                        250       260
                 ....*....|....*....|...
gi 895971649 283 TLVLLVAILMIGARLISKRYSVK 305
Cdd:COG0581  235 VLLLLVLLLNLLARLLRRRFRKK 257
3a0107s02c TIGR00974
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ...
 30-304 7.37e-82

phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273373  Cd Length: 271  Bit Score: 248.30  E-value: 7.37e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649   30 DKLATVIIYFAMALALVPLLWVLIKVLSEGLPAIlNPDWWVYDmvgQPRNKAGGGAVHAIIGTLMQVVVTSALSIPIGVF 109
Cdd:TIGR00974   1 DKIFTFISLLSALLALLPLIWILWYILIKGLPAL-NLEFFTKS---PTPTGAEGGIGPAIVGTLLLTLLAIVIAVPLGIG 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  110 TAIYLVEYSRGGFLGRITTFMVDILTGVPSIVAALFVYAMWI-TMFGFERSGFAVSLALVLLMVPIIVRNAEEMLRVVPM 188
Cdd:TIGR00974  77 AAIYLAEYANGSRFTKIIRFAVDILAGVPSIVVGLFGYGFFVlTYLGGGFSLLAGALALALLILPVIIRTTEEALKAVPK 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  189 DLREASYALGVPKWKTIVKIVLPTALSGIVTGIMLAVARVMGESAPVLILVGSTTKINWNPFEGGqQSLPLYMVDLYGAG 268
Cdd:TIGR00974 157 DLREASLALGATKWQTIFKVVLPAALPGILTGIILSIARAAGETAPLLFTAGGSAFTPPNLFDPF-ATLPVLIYNLASEG 235

                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 895971649  269 SNEFVLERLWGSALTLVLLVAILMIGARLISKRYSV 304
Cdd:TIGR00974 236 PYVEAQQLAWAAALVLIVLVLLLNLIARLLRRRFKK 271
pstA PRK11268
phosphate ABC transporter permease PstA;
24-236 4.56e-55

phosphate ABC transporter permease PstA;


Pssm-ID: 183065 [Multi-domain]  Cd Length: 295  Bit Score: 180.65  E-value: 4.56e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  24 GKRKAVDKLATVIIYFAMALALVPLLWVLIKVLSEGLPAIlnpDWWVYDMVGQPRNKAGGGAVHAIIGTLMQVVVTSALS 103
Cdd:PRK11268  21 ARRRLKNRIALTLSMATMAFGLFWLIWILMSTITLGIDGM---SLALFTEMTPPPNTAGGGLANAIAGSGLLILWATVVG 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649 104 IPIGVFTAIYLVEYSRGGFLGRITTFMVDILTGVPSIVAALFVYAMWITMFGfERSGFAVSLALVLLMVPIIVRNAEEML 183
Cdd:PRK11268  98 TPLGIMAGIYLAEYGRKSWLAEVIRFINDILLSAPSIVVGLFVYTIVVAQME-HFSGWAGVIALALLQIPIVIRTTENML 176

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 895971649 184 RVVPMDLREASYALGVPKWKTIVKIVLPTALSGIVTGIMLAVARVMGESAPVL 236
Cdd:PRK11268 177 KLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGVLLAIARIAGETAPLL 229
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 89-245 2.52e-17

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 78.47  E-value: 2.52e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  89 IIGTLMQVVVTSALSIPIGVFTAIYLVEYsrGGFLGRITTFMVDILTGVPSIVAALFVYAMWITMFGFERSGFAVSLALV 168
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARK--RGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPGLGLPALI 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649 169 LLMV---PIIVRNAEEMLRVVPMDLREASYALGVPKWKTIVKIVLPTALSGIVTGIMLAVARVMGESAPVLILVGSTTKI 245
Cdd:cd06261   79 LALLliaPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPG 158
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 103-304 4.55e-13

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 66.17  E-value: 4.55e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  103 SIPIGVFTAIYlveysRGGFLGRITTFMVDILTGVPSIV-AALFVYAMWITMFGFerSGFAVSLALVLLMVPIIVRNAEE 181
Cdd:pfam00528   1 GIPLGIIAALR-----RGRRLDRLLRPLIDLLQALPSFVlAILLVVIAILSILGH--GILPAIILALLGWAGYARLIRRA 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  182 MLRVVPMDLREASYALGVPKWKTIVKIVLPTALSGIVTGIMLAVARVMGESAPVLILvgsttkinwnpfeGGQQSLPLYM 261
Cdd:pfam00528  74 ALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFL-------------GSWPGLGLLL 140

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 895971649  262 VDLYGAGSNEFVLERLWGSALTLVLLVAILMIGARLISKRYSV 304
Cdd:pfam00528 141 IEAILGYDYPEIQGPVLAAALILLLLNLLVDILQRLLDPRVRK 183
 
Name Accession Description Interval E-value
PstA COG0581
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 43-305 2.55e-100

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440346 [Multi-domain]  Cd Length: 259  Bit Score: 295.02  E-value: 2.55e-100
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  43 LALVPLLWVLIKVLSEGLPAiLNPDWWVYDMvgqPRNKAGGGAVHAIIGTLMQVVVTSALSIPIGVFTAIYLVEYSRGGF 122
Cdd:COG0581    1 LALLPLVWILGTVLVKGLPA-LSWEFLTSSP---SPGPEGGGILPAIVGTLLLVLLATLIAVPLGVLAAIYLAEYARGGR 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649 123 LGRITTFMVDILTGVPSIVAALFVYAMWITMFGFERSGFAVSLALVLLMVPIIVRNAEEMLRVVPMDLREASYALGVPKW 202
Cdd:COG0581   77 LARLIRFAIDVLAGVPSIVYGLFGYALFVLTLGLGFSLLAGALALALLMLPVVIRTTEEALRLVPNSLREASYALGATKW 156

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649 203 KTIVKIVLPTALSGIVTGIMLAVARVMGESAPVLILVGSTTKINWNPFEGGqQSLPLYMVDLYGAGSNEFVlERLWGSAL 282
Cdd:COG0581  157 QTIRKVVLPAALPGILTGVILAIARAAGETAPLLFTAGVSPFLPLSLFDPF-ATLPVHIYNLASSPYPAAQ-ELAWAAAL 234

                        250       260
                 ....*....|....*....|...
gi 895971649 283 TLVLLVAILMIGARLISKRYSVK 305
Cdd:COG0581  235 VLLLLVLLLNLLARLLRRRFRKK 257
3a0107s02c TIGR00974
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ...
 30-304 7.37e-82

phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273373  Cd Length: 271  Bit Score: 248.30  E-value: 7.37e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649   30 DKLATVIIYFAMALALVPLLWVLIKVLSEGLPAIlNPDWWVYDmvgQPRNKAGGGAVHAIIGTLMQVVVTSALSIPIGVF 109
Cdd:TIGR00974   1 DKIFTFISLLSALLALLPLIWILWYILIKGLPAL-NLEFFTKS---PTPTGAEGGIGPAIVGTLLLTLLAIVIAVPLGIG 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  110 TAIYLVEYSRGGFLGRITTFMVDILTGVPSIVAALFVYAMWI-TMFGFERSGFAVSLALVLLMVPIIVRNAEEMLRVVPM 188
Cdd:TIGR00974  77 AAIYLAEYANGSRFTKIIRFAVDILAGVPSIVVGLFGYGFFVlTYLGGGFSLLAGALALALLILPVIIRTTEEALKAVPK 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  189 DLREASYALGVPKWKTIVKIVLPTALSGIVTGIMLAVARVMGESAPVLILVGSTTKINWNPFEGGqQSLPLYMVDLYGAG 268
Cdd:TIGR00974 157 DLREASLALGATKWQTIFKVVLPAALPGILTGIILSIARAAGETAPLLFTAGGSAFTPPNLFDPF-ATLPVLIYNLASEG 235

                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 895971649  269 SNEFVLERLWGSALTLVLLVAILMIGARLISKRYSV 304
Cdd:TIGR00974 236 PYVEAQQLAWAAALVLIVLVLLLNLIARLLRRRFKK 271
pstA PRK11268
phosphate ABC transporter permease PstA;
24-236 4.56e-55

phosphate ABC transporter permease PstA;


Pssm-ID: 183065 [Multi-domain]  Cd Length: 295  Bit Score: 180.65  E-value: 4.56e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  24 GKRKAVDKLATVIIYFAMALALVPLLWVLIKVLSEGLPAIlnpDWWVYDMVGQPRNKAGGGAVHAIIGTLMQVVVTSALS 103
Cdd:PRK11268  21 ARRRLKNRIALTLSMATMAFGLFWLIWILMSTITLGIDGM---SLALFTEMTPPPNTAGGGLANAIAGSGLLILWATVVG 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649 104 IPIGVFTAIYLVEYSRGGFLGRITTFMVDILTGVPSIVAALFVYAMWITMFGfERSGFAVSLALVLLMVPIIVRNAEEML 183
Cdd:PRK11268  98 TPLGIMAGIYLAEYGRKSWLAEVIRFINDILLSAPSIVVGLFVYTIVVAQME-HFSGWAGVIALALLQIPIVIRTTENML 176

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 895971649 184 RVVPMDLREASYALGVPKWKTIVKIVLPTALSGIVTGIMLAVARVMGESAPVL 236
Cdd:PRK11268 177 KLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGVLLAIARIAGETAPLL 229
PstC COG0573
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 23-305 4.56e-50

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440338 [Multi-domain]  Cd Length: 303  Bit Score: 167.96  E-value: 4.56e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  23 SGKRKAVDKLATVIIYFAMALALVPLLWVLIKVLSEGLPAILNPDWW--VYDMVGQPRNKAGG-GAVHAIIGTLMQVVVT 99
Cdd:COG0573   10 RRRRRLGDRLFRGLLLLAALLSILILLLIVLFLLIESLPAFQEVGLLefLTGTEWNPVSSNGEfGILPLIVGTLLVSLIA 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649 100 SALSIPIGVFTAIYLVEYSrGGFLGRITTFMVDILTGVPSIV---AALFVYAMWI-TMFGFERSGF---AVSLALVLLMV 172
Cdd:COG0573   90 LLIAVPLGLGIAIFLSEYA-PPRLRRILKPAIELLAGIPSVVygfWGLFVLVPLLrDLFPWPPSGFsllTAGIVLAIMIL 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649 173 PIIVRNAEEMLRVVPMDLREASYALGVPKWKTIVKIVLPTALSGIVTGIMLAVARVMGESAPVLILVGSTTKINWNPFEG 252
Cdd:COG0573  169 PTITSLSRDALRAVPRSLREAALALGATRWETIRKVVLPAARSGIIAAVILGLGRALGETMAVLMVAGNAPQIPFSLFDP 248

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 895971649 253 GqQSLPLYMVDLYG-AGSNEFVLERLWGSALTLVLLVAILMIGARLISKRYSVK 305
Cdd:COG0573  249 G-RTLTALIALEFGeAPFGSLHYSALFALGLVLFVITLLVNLLARLIVRRYREK 301
phosphate_pstC TIGR02138
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ...
 30-303 1.51e-31

phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273992 [Multi-domain]  Cd Length: 295  Bit Score: 119.29  E-value: 1.51e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649   30 DKLATVIIYFAMALALVPLLWVLIKVLSEGLPAILN--PDWWVYDMVGQPRNKAGG---GAVHAIIGTLMQVVVTSALSI 104
Cdd:TIGR02138   1 EKIFKGLLLFSAVIIVLVLLLIVLFLLYEAIPAFEKngILNFLTGTVWDPGSGPVQeqyGALPLIVGTLITSLIALLIAV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  105 PIGVFTAIYLVEYSrGGFLGRITTFMVDILTGVPSIVA---ALFVYAMWITMF-------------GFERSGFAVSLALV 168
Cdd:TIGR02138  81 PVGIGIAIFLSEIA-PKRVRSVLKPVVELLAGIPSVVYgfwGLFVLVPFLKPHfqpflgsnlglipLFGGPILTAGIVLA 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  169 LLMVPIIVRNAEEMLRVVPMDLREASYALGVPKWKTIVKIVLPTALSGIVTGIMLAVARVMGESAPVLILVGSTTKIN-W 247
Cdd:TIGR02138 160 IMILPTIASISRDALRAVPRSYKEASYALGATKWETIRRVILPAARSGIVGAVVLGLGRALGETMAVTMVIGNVFPISpL 239

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 895971649  248 NPFEGGQQSLPLYMVDLYGAGSNEFVLERLWGSALTLVLLVAILMIGARLISKRYS 303
Cdd:TIGR02138 240 SLFDPGTTITSLIANQFGEASGGSVHTSALFALGLVLFVITLLVNILARYIVRRRR 295
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 89-245 2.52e-17

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 78.47  E-value: 2.52e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  89 IIGTLMQVVVTSALSIPIGVFTAIYLVEYsrGGFLGRITTFMVDILTGVPSIVAALFVYAMWITMFGFERSGFAVSLALV 168
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARK--RGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPGLGLPALI 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649 169 LLMV---PIIVRNAEEMLRVVPMDLREASYALGVPKWKTIVKIVLPTALSGIVTGIMLAVARVMGESAPVLILVGSTTKI 245
Cdd:cd06261   79 LALLliaPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPG 158
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
32-301 1.93e-15

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 76.35  E-value: 1.93e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  32 LATVIIYFAMALALVPLLWVLIKVLSEGLPAILNPDWWVYDMvgqprnkAGGGAVHAIIGTLMQVVVTSALSIPIGVFTA 111
Cdd:COG1178  290 ALALCLLLVLLGLLLPLLALLLWSLTKALDDNLTLDNYRFVL-------LDPSLLRALLNSLLLALLAALLAVLLALLLA 362

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649 112 IYLVEysRGGFLGRITTFMVDILTGVPSIVAALFVYAMWITMFGFERSG--FAVSLALVLLMVPIIVRNAEEMLRVVPMD 189
Cdd:COG1178  363 YLVRR--RRGRLARLLDRLAMLPYAVPGIVLGLGLLLLFNRPLPLLLYGtlAILVLAYVVRFLPFALRSLEAALAQIDPS 440

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649 190 LREASYALGVPKWKTIVKIVLPTALSGIVTGIMLAVARVMGESAPVLILVGSttkinwnpfegGQQSLPLYMVDLYGAGS 269
Cdd:COG1178  441 LEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTSMKELSATLLLRPP-----------GFETLAVLIYQLASSGR 509

                        250       260       270
                 ....*....|....*....|....*....|..
gi 895971649 270 NEFVLerlwGSALTLVLLVAILMIGARLISKR 301
Cdd:COG1178  510 YGEAA----ALALLLVLVSLLPVLLLERLLGR 537
CysU COG0555
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 32-242 1.38e-13

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440321 [Multi-domain]  Cd Length: 268  Bit Score: 69.39  E-value: 1.38e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  32 LATVIIYFAMALaLVPLLWVLIKVLSEGLPAILnpdwwvyDMVGQPRnkagggAVHAIIGTLMQVVVTSALSIPIGVFTA 111
Cdd:COG0555   13 LGLTLLYLSLIV-LLPLAALVLKAAGLGWAEFW-------AVLTSPR------VLAALKLSLGTALIAALINLVFGLPLA 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649 112 IYLVEYSrggFLG-RITTFMVDILTGVPSIVAA---LFVYA------MWITMFGFE--RSGFAVSLALVLLMVPIIVRNA 179
Cdd:COG0555   79 WVLVRYR---FPGkRLVDALVDLPFALPTAVAGialLLLFGpngwlgQLLAPLGIKvaFTPLGIVLAQTFVSLPFVVRTV 155

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 895971649 180 EEMLRVVPMDLREASYALGVPKWKTIVKIVLPTALSGIVTGIMLAVARVMGESAPVLILVGST 242
Cdd:COG0555  156 QPVLEELDPELEEAAATLGASRWQTFRRVILPLLLPALLTGFALAFARALGEFGAVIFIAGNL 218
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 103-304 4.55e-13

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 66.17  E-value: 4.55e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  103 SIPIGVFTAIYlveysRGGFLGRITTFMVDILTGVPSIV-AALFVYAMWITMFGFerSGFAVSLALVLLMVPIIVRNAEE 181
Cdd:pfam00528   1 GIPLGIIAALR-----RGRRLDRLLRPLIDLLQALPSFVlAILLVVIAILSILGH--GILPAIILALLGWAGYARLIRRA 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  182 MLRVVPMDLREASYALGVPKWKTIVKIVLPTALSGIVTGIMLAVARVMGESAPVLILvgsttkinwnpfeGGQQSLPLYM 261
Cdd:pfam00528  74 ALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFL-------------GSWPGLGLLL 140

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 895971649  262 VDLYGAGSNEFVLERLWGSALTLVLLVAILMIGARLISKRYSV 304
Cdd:pfam00528 141 IEAILGYDYPEIQGPVLAAALILLLLNLLVDILQRLLDPRVRK 183
PotC COG1177
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ...
 97-301 2.20e-12

ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];


Pssm-ID: 440790 [Multi-domain]  Cd Length: 262  Bit Score: 65.90  E-value: 2.20e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  97 VVTSALSIPIGVFTAIYLVEYSRggFLGRITTFMVDILTGVPSIVAALFVYAMWITMfGFERSGFAVSLALVLLMVPIIV 176
Cdd:COG1177   71 LLSTLLATVLGTPAALALARYRF--RGRRLLLALLLLPLVVPGIVLGVALLLLFSAL-GLSGGLWGLILAHVVFTLPFVV 147

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649 177 RNAEEMLRVVPMDLREASYALGVPKWKTIVKIVLPTALSGIVTGIMLAVARVMGESAPVLILVGsttkinwnpfeGGQQS 256
Cdd:COG1177  148 LVVLARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVITLFLAG-----------PGVTT 216

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 895971649 257 LPLYMVDLYGAGSNEFVlerlwgSALT--LVLLVAILMIGARLISKR 301
Cdd:COG1177  217 LPVYIYSMIRRGISPEI------NALStlLILLSLLLLLLAERLRRR 257
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
32-238 8.33e-11

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 62.49  E-value: 8.33e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  32 LATVIIYFAMALALVPLLWVLIKVLSEGLPAILnpdwwvyDMVGQPRNkagggaVHAIIGTLMQVVVTSALSIPIGVFTA 111
Cdd:COG1178   12 LLLLLALLLALLVLLPLLALLLRAFTDGLANFW-------ALLSDPYL------WRALGNTLLLALLVTLLSLLLGVPLA 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649 112 iYLVEYSRggFLGR-------ITTFMVdiltgvPSIVAAL----------FVYAMWITMFGFE----RSGFAVSLALVLL 170
Cdd:COG1178   79 -WLLARTD--FPGRrllrwllLLPLAL------PPYVVALawialfgpngLLNTLLRALFGLEppdiYGLGGIILVLVLF 149

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 895971649 171 MVPIIVRNAEEMLRVVPMDLREASYALGVPKWKTIVKIVLPTALSGIVTGIMLAVARVMGESAPVLIL 238
Cdd:COG1178  150 NYPYVYLLLRAALRSIDASLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALLVFLLCLADFGTPLVL 217
permease_CysW TIGR02140
sulfate ABC transporter, permease protein CysW; This model represents CysW, one of two ...
 32-301 1.34e-10

sulfate ABC transporter, permease protein CysW; This model represents CysW, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysT (TIGR02139). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]


Pssm-ID: 162725  Cd Length: 261  Bit Score: 60.48  E-value: 1.34e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649   32 LATVIIYFAMALALVPLLWVLIKVLSEGL----PAILNPDwwvydmvgqprnkagggAVHAIIGTLMQVVVTSALSIPIG 107
Cdd:TIGR02140   5 LISLALGLLFLLLLLPLALIFQEAFEKGFgvffAAISDPD-----------------ALSAIKLTLLVALIVVPLNTVFG 67

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  108 VFTAIYLveySRGGFLGR--ITTFmVDILTGVPSIVAALfvyaMWITMFG--------FERSGF-------AVSLALVLL 170
Cdd:TIGR02140  68 VCAAWVL---TRFQFPGKrlLLTI-IDLPFSVSPVVAGL----IFVLLYGsqgwlgpwLEDLDIkiifslpGIVLATMFV 139

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  171 MVPIIVRNAEEMLRVVPMDLREASYALGVPKWKTIVKIVLPTALSGIVTGIMLAVARVMGESAPVLILVGSttkinwnpF 250
Cdd:TIGR02140 140 TCPFVARELIPVMEEQGTEQEEAALTLGASWWQTFWRVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGH--------I 211

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 895971649  251 EGGQQSLPLYMVDLYgagsNEFVLERLWGSALTLVLLVAILMIGARLISKR 301
Cdd:TIGR02140 212 RGKTNTLPLHVELLY----NEYQSYAAFAAASLLALLALVTLVLKAILERR 258
pstC PRK11275
phosphate ABC transporter permease PstC;
84-246 5.03e-10

phosphate ABC transporter permease PstC;


Pssm-ID: 183070  Cd Length: 319  Bit Score: 59.32  E-value: 5.03e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  84 GAVHAIIGTLMQVVVTSALSIPIGVFTAIYLVEYSrGGFLGRITTFMVDILTGVPSIVA---ALFVYA------------ 148
Cdd:PRK11275  70 GALVPIYGTLVTSFIALLIAVPVSFGIALFLTELA-PGWLKRPLGIAIELLAAIPSIVYgmwGLFVFAplfatyfqepvg 148

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649 149 -----MWITMFGFERSGF-----AVSLALVLLMVPIIVRNAEEMLRVVPMDLREASYALGVPKWKTIVKIVLPTALSGIV 218
Cdd:PRK11275 149 nvlsnIPIVGALFSGPAFgigilAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVI 228

                        170       180
                 ....*....|....*....|....*...
gi 895971649 219 TGIMLAVARVMGESAPVLILVGSTTKIN 246
Cdd:PRK11275 229 GGVMLGLGRALGETMAVTFIIGNTYQLD 256
cysT CHL00187
sulfate transport protein; Provisional
 37-240 1.19e-07

sulfate transport protein; Provisional


Pssm-ID: 214388 [Multi-domain]  Cd Length: 237  Bit Score: 51.55  E-value: 1.19e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  37 IYFAMALALVPLLWVLIKvlseglpAILNPDWWVYDMVGQPRnkagggAVHAIIGTLMQVVVTSALSIPIGVFTAIYLVE 116
Cdd:CHL00187  18 LSYIIFLLVLPILALLIK-------ASQQPWSDFLQKATEPI------ALSAYSLTLSMALIAALINGFFGLLIAWVLVR 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649 117 YsrgGFLG-RITTFMVDILTGVPSIVAALF---VYA------MWITMFG----FERSGfaVSLALVLLMVPIIVRNAEEM 182
Cdd:CHL00187  85 Y---NFPGkRLLDAAVDLPFALPTSVAGLTlatVYGdngwigHLLSHLGiqivFTKLG--VLLAMIFVSFPFVVRTIQPV 159

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 895971649 183 LRVVPMDLREASYALGVPKWKTIVKIVLPTALSGIVTGIMLAVARVMGESAPVLILVG 240
Cdd:CHL00187 160 LQEIEKELEEAAWSLGASPWQTFWKVIFPPLIPALLTGLALTFSRAIGEYGSIVIISS 217
DppC COG1173
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid ...
 96-229 1.68e-07

ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism];


Pssm-ID: 440786 [Multi-domain]  Cd Length: 275  Bit Score: 51.65  E-value: 1.68e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  96 VVVTSALSIPIGVFTAIYlveysrGGFLGRITTFMVDILTGVPSIVAALFVYAMwitmfgFERSGFAVSLALVLLMVPII 175
Cdd:COG1173   89 VLIALVIGVLLGLLAGYF------GGWVDAVLMRLVDVLLAFPSLLLAIALVAV------LGPGLLNVILALGLTGWPGY 156

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 895971649 176 VRNAE-EMLRVVPMDLREASYALGVPKWKTIVKIVLPTALSGIVTGIMLAVARVM 229
Cdd:COG1173  157 ARLVRaQVLSLREREYVEAARALGASPLRIIFRHILPNVLPPLIVQATLGIASAI 211
modB PRK09421
molybdate ABC transporter permease subunit;
88-231 6.24e-07

molybdate ABC transporter permease subunit;


Pssm-ID: 181841  Cd Length: 229  Bit Score: 49.53  E-value: 6.24e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  88 AIIGTLMQVVVTSALSIPIGVFTAIYLVeysRGGFLGR----------------ITTFMVDILTGVPSIVAAlFVYAMWI 151
Cdd:PRK09421  10 AVLLSLKVSSVAVLFSLPFGILVAWLLA---RCRFPGKslldsllhlplvlppvVTGYLLLISMGRRGFIGQ-WLYEWFG 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649 152 TMFGFERSGFAVSLALVLLmvPIIVRNAEEMLRVVPMDLREASYALGVPKWKTIVKIVLPTALSGIVTGIMLAVARVMGE 231
Cdd:PRK09421  86 ISFAFSWRGAALAAAVMAF--PLMVRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLGE 163
HisM COG0765
ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; ...
 92-214 7.02e-07

ABC-type amino acid transport system, permease component [Amino acid transport and metabolism];


Pssm-ID: 440528 [Multi-domain]  Cd Length: 218  Bit Score: 48.92  E-value: 7.02e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  92 TLMQVVVTSALSIPIGVFTAiyLVEYSRGGFLGRITTFMVDILTGVPSIVAALFVYAMwITMFGFERSGF-AVSLALVLL 170
Cdd:COG0765   22 TLLLTVLAIVLGLVLGLLLA--LARLSPNPVLRWLATAYVEFFRGTPLLVQLFFIYFG-LPLLGIDLSPFvAAVIALTLN 98

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 895971649 171 M---VPIIVRNAeemLRVVPMDLREASYALGVPKWKTIVKIVLPTAL 214
Cdd:COG0765   99 SaayLAEIVRAG---IQSVPKGQWEAARALGLSRWQTMRRIILPQAL 142
PotB COG1176
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ...
 88-301 1.48e-06

ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];


Pssm-ID: 440789 [Multi-domain]  Cd Length: 287  Bit Score: 48.61  E-value: 1.48e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  88 AIIGTLMQVVVTSALSIPIGVFTAIYLVEYSRGgfLGRITTFMVDILTGVPSIVAALfvyaMWITMFGFE---------- 157
Cdd:COG1176   68 VLLRTLWIALLTTLICLLLGYPIAYFLARAPPR--WRNLLLLLVILPFWTSFLVRTY----AWIVLLGRNgllnslllal 141

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649 158 ----------RSGFAVSLALVLLMVPIIVRNAEEMLRVVPMDLREASYALGVPKWKTIVKIVLPTALSGIVTGIMLAVAR 227
Cdd:COG1176  142 glideplrllYTEFAVVIGLVYVYLPFMVLPLYAALEKIDPSLLEAARDLGASPWQTFRRVILPLSLPGIIAGSLLVFIP 221

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 895971649 228 VMGESAPVLILVGSTTkinwnpfeggqQSLPLYMVDLYGAGSNefvlerlW--GSALTLVLLVAIL---MIGARLISKR 301
Cdd:COG1176  222 ALGAFVTPALLGGGKV-----------LMIGNLIYQQFLSALN-------WplAAALAVVLLLIVLlvlLLYLRLLRRR 282
PRK10971 PRK10971
sulfate/thiosulfate ABC transporter permease CysT;
92-240 7.58e-05

sulfate/thiosulfate ABC transporter permease CysT;


Pssm-ID: 182873  Cd Length: 277  Bit Score: 43.59  E-value: 7.58e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  92 TLMQVVVTSALSIPIGVFTAIYLVEYSrggFLGR-ITTFMVDILTGVPSIVAALFV---------YAMWITMFGFERSG- 160
Cdd:PRK10971  63 TLLSAFVASIFNAVFGLLMAWILTRYR---FPGRtLLDALMDLPFALPTAVAGLTLaslfsvngwYGEWLAKFDIKVTYt 139

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649 161 -FAVSLALVLLMVPIIVRNAEEMLRVVPMDLREASYALGVPKWKTIVKIVLPTALSGIVTGIMLAVARVMGESAPVLILV 239
Cdd:PRK10971 140 wLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGVALSFTRSLGEFGAVIFIA 219


                 .
gi 895971649 240 G 240
Cdd:PRK10971 220 G 220
cysW PRK11602
sulfate/thiosulfate ABC transporter permease CysW;
39-241 9.47e-05

sulfate/thiosulfate ABC transporter permease CysW;


Pssm-ID: 183225  Cd Length: 283  Bit Score: 43.20  E-value: 9.47e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  39 FAMALALVPLLWVLIKVLSEGLPAILnpdwwvydmvgqpRNKAGGGAVHAIIGTLMQVVVTSALSIPIGVFTAiYLVeyS 118
Cdd:PRK11602  29 VSAFILVVPMIYIFVQAFSKGLMPVL-------------QNLADPDMLHAIWLTVLIALIAVPVNLVFGILLA-WLV--T 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649 119 RGGFLGR-ITTFMVDILTGVPSIVAALFVYAMWIT---------------MFGFErsgfAVSLALVLLMVPIIVRNAEEM 182
Cdd:PRK11602  93 RFNFPGRqLLLTLLDIPFAVSPVVAGLVYLLFYGSngplggwldehnlqlMFSWP----GMVLVTIFVTCPFVVRELVPV 168

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 895971649 183 LRVVPMDLREASYALGVPKWKTIVKIVLPTALSGIVTGIMLAVARVMGESAPVLILVGS 241
Cdd:PRK11602 169 MLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGS 227
DppB COG0601
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid ...
 96-230 2.56e-04

ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism];


Pssm-ID: 440366 [Multi-domain]  Cd Length: 314  Bit Score: 41.98  E-value: 2.56e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  96 VVVTSALSIPIGVFTAIYlveysRGGFLGRITTFMVDILTGVPS-IVAALFVY-----------AMWITMFGFERSGFAV 163
Cdd:COG0601  106 LLLALLIGIPLGILAALR-----RGSWLDRLITVLALLGISIPSfWLGLLLILlfavklgwlpvSGRVSPWEDFLDALRH 180

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 895971649 164 ----SLALVLLMVPII---VRNAeeMLRVVPMDLREASYALGVPKWKTIVKIVLPTALSGIVTGIMLAVARVMG 230
Cdd:COG0601  181 lilpALTLALGSLAGIarlTRSS--MLEVLGQDYVRTARAKGLSERRVLLRHALRNALIPVVTVLGLQLGGLLG 252
glnP PRK09494
glutamine ABC transporter permease protein; Reviewed
 120-214 2.78e-03

glutamine ABC transporter permease protein; Reviewed


Pssm-ID: 181907 [Multi-domain]  Cd Length: 219  Bit Score: 38.50  E-value: 2.78e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649 120 GGFLGRITTFMVDILTGVPSIVAALFVYAMWITMFGFERSGfAVSLALVLLMV------PIIVRNAeemLRVVPMDLREA 193
Cdd:PRK09494  48 GWIANHIALVFIELIRGTPIVVQVMFIYFALPMAFNDLRID-PFTAAVVTIMInsgayiAEITRGA---VLSIHKGFREA 123

                         90       100
                 ....*....|....*....|.
gi 895971649 194 SYALGVPKWKTIVKIVLPTAL 214
Cdd:PRK09494 124 GLALGLSRRETLRYVIGPLAL 144
PRK15050 PRK15050
2-aminoethylphosphonate transport system permease PhnU; Provisional
 82-238 9.63e-03

2-aminoethylphosphonate transport system permease PhnU; Provisional


Pssm-ID: 237888 [Multi-domain]  Cd Length: 296  Bit Score: 36.91  E-value: 9.63e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649  82 GGGAVHAIIGTLMQVVVTSALSIPI-GVFTA--IYLVEYSRGGFLGRittfMVDILTGVPSIVAAL---FVY-------A 148
Cdd:PRK15050  67 GSPDFRGALLTTLQIAFASTAGCLVlGVLLAlvLAFVPFPGASLVGR----FIDTFVAFPSFLITLaftFLYgsagsvnI 142

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 895971649 149 MWITMFGFER-------SGFAVSLALVLLMVPIIVRNAEEMLRVVPMDLREASYALGVPKWKTIVKIVLPTALSGIVTGI 221
Cdd:PRK15050 143 ALQRLFGLEAppldflySPGGVILAEITFYTPFVVRPLLAAFAQLDARQLEAAASLGASPWRVARRVILPEAWPALAAGG 222

                        170
                 ....*....|....*..
gi 895971649 222 MLAVARVMGESAPVLIL 238
Cdd:PRK15050 223 SLCLLLTLNEFGIVLFT 239
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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