|
Name |
Accession |
Description |
Interval |
E-value |
| ddl |
PRK01966 |
D-alanine--D-alanine ligase; |
4-348 |
4.09e-156 |
|
D-alanine--D-alanine ligase;
Pssm-ID: 234993 [Multi-domain] Cd Length: 333 Bit Score: 441.48 E-value: 4.09e-156
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 4 KIKVGLIFGGNSSEYEVSIMSAHNIYEEIDTNKFDVYPMWITNDGYLANDADSRKVLDnpkmevANPHKVANISNIVELK 83
Cdd:PRK01966 3 KMRVALLFGGRSAEHEVSLVSAKSVLKALDKEKYEVVPIGITKDGRWYLIDADNMELA------DDDNDKEDLSLLILPS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 84 DRP-EIDVFFPIVHGNLGEDGCLQGLFRVLDKPFVGDDVLAAAVTMDKEMTKILAQRAGVPVAKWIAVKRFEYndpdnKK 162
Cdd:PRK01966 77 GGSeEVDVVFPVLHGPPGEDGTIQGLLELLGIPYVGCGVLASALSMDKILTKRLLAAAGIPVAPYVVLTRGDW-----EE 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 163 LDYEYVASQLGSDLFVKPSNQGSSVGVSHVTNEKEYKVALAEAFKYDDKVLVEETVHGTEVETAVLGNDkPIVAGVGQII 242
Cdd:PRK01966 152 ASLAEIEAKLGLPVFVKPANLGSSVGISKVKNEEELAAALDLAFEYDRKVLVEQGIKGREIECAVLGND-PKASVPGEIV 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 243 NAKDsFYTYENKYDDDStSTLEIPAKLPEGIVEKVRKNALKVFQATECSGLARIDSMLrTEDKEVVLTEVNALPGFTNIS 322
Cdd:PRK01966 231 KPDD-FYDYEAKYLDGS-AELIIPADLSEELTEKIRELAIKAFKALGCSGLARVDFFL-TEDGEIYLNEINTMPGFTPIS 307
|
330 340
....*....|....*....|....*.
gi 896127975 323 MYPKLFEEVGIPYTDLITKLIDYAME 348
Cdd:PRK01966 308 MYPKLWEASGLSYPELIDRLIELALE 333
|
|
| DdlA |
COG1181 |
D-alanine-D-alanine ligase or related ATP-grasp enzyme [Cell wall/membrane/envelope biogenesis, ... |
5-347 |
1.82e-128 |
|
D-alanine-D-alanine ligase or related ATP-grasp enzyme [Cell wall/membrane/envelope biogenesis, General function prediction only]; D-alanine-D-alanine ligase or related ATP-grasp enzyme is part of the Pathway/BioSystem: Mureine biosynthesis
Pssm-ID: 440794 [Multi-domain] Cd Length: 303 Bit Score: 370.21 E-value: 1.82e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 5 IKVGLIFGGNSSEYEVSIMSAHNIYEEIDTNKFDVYPMWItndgylandadsrkvldnpkmevanphkvaNISNIVELKD 84
Cdd:COG1181 1 MRVAVLFGGRSAEREVSLKSGRAVAAALDKAGYDVVPIGI------------------------------DVEDLPAALK 50
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 85 RPEIDVFFPIVHGNLGEDGCLQGLFRVLDKPFVGDDVLAAAVTMDKEMTKILAQRAGVPVAKWIAVKRFEYndpdnkkLD 164
Cdd:COG1181 51 ELKPDVVFPALHGRGGEDGTIQGLLELLGIPYTGSGVLASALAMDKALTKRVLAAAGLPTPPYVVLRRGEL-------AD 123
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 165 YEYVASQLGSDLFVKPSNQGSSVGVSHVTNEKEYKVALAEAFKYDDKVLVEETVHGTEVETAVLGNDKPIVAGVGQIInA 244
Cdd:COG1181 124 LEAIEEELGLPLFVKPAREGSSVGVSKVKNAEELAAALEEAFKYDDKVLVEEFIDGREVTVGVLGNGGPRALPPIEIV-P 202
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 245 KDSFYTYENKYDDDSTsTLEIPAKLPEGIVEKVRKNALKVFQATECSGLARIDSMLrTEDKEVVLTEVNALPGFTNISMY 324
Cdd:COG1181 203 ENGFYDYEAKYTDGGT-EYICPARLPEELEERIQELALKAFRALGCRGYARVDFRL-DEDGEPYLLEVNTLPGMTPTSLL 280
|
330 340
....*....|....*....|...
gi 896127975 325 PKLFEEVGIPYTDLITKLIDYAM 347
Cdd:COG1181 281 PKAAAAAGISYEELIERIIELAL 303
|
|
| D_ala_D_alaTIGR |
TIGR01205 |
D-alanine--D-alanine ligase; This model describes D-Ala--D-Ala ligase, an enzyme that makes a ... |
6-346 |
3.67e-110 |
|
D-alanine--D-alanine ligase; This model describes D-Ala--D-Ala ligase, an enzyme that makes a required precursor of the bacterial cell wall. It also describes some closely related proteins responsible for resistance to glycopeptide antibiotics such as vancomycin. The mechanism of glyopeptide antibiotic resistance involves the production of D-alanine-D-lactate (VanA and VanB families) or D-alanine-D-serine (VanC). The seed alignment contains only chromosomally encoded D-ala--D-ala ligases, but a number of antibiotic resistance proteins score above the trusted cutoff of this model. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273498 [Multi-domain] Cd Length: 315 Bit Score: 324.24 E-value: 3.67e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 6 KVGLIFGGNSSEYEVSIMSAHNIYEEIDTNKFDVYPMWITNDGylandadSRKVLDNPkmevanpHKVANISNIVElkdr 85
Cdd:TIGR01205 1 RVAVLFGGKSAEHEISLVSAAAVLKALRDLGYDVYPVDIDKMG-------SWTYKDLP-------QLILELGALLE---- 62
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 86 pEIDVFFPIVHGNLGEDGCLQGLFRVLDKPFVGDDVLAAAVTMDKEMTKILAQRAGVPVAKWIAVKRFEYNDPdnkKLDY 165
Cdd:TIGR01205 63 -GIDVVFPVLHGRYGEDGTIQGLLELMGIPYTGSGVLASALSMDKLLTKLLWKALGLPTPDYIVLTQNRASAD---ELEC 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 166 EYVASQLGSDLFVKPSNQGSSVGVSHVTNEKEYKVALAEAFKYDDKVLVEETVHGTEVETAVLGNDK--PIVAGVGQIin 243
Cdd:TIGR01205 139 EQVAEPLGFPVIVKPAREGSSVGVSKVKSEEELQAALDEAFEYDEEVLVEQFIKGRELEVSILGNEEalPIIEIVPEI-- 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 244 akDSFYTYENKYDDDSTSTLeIPAKLPEGIVEKVRKNALKVFQATECSGLARIDSMLrTEDKEVVLTEVNALPGFTNISM 323
Cdd:TIGR01205 217 --EGFYDYEAKYLDGSTEYV-IPAPLDEELEEKIKELALKAYKALGCRGLARVDFFL-DEEGEIYLNEINTIPGMTAISL 292
|
330 340
....*....|....*....|...
gi 896127975 324 YPKLFEEVGIPYTDLITKLIDYA 346
Cdd:TIGR01205 293 FPKAAAAAGIEFSQLVERILELA 315
|
|
| Dala_Dala_lig_C |
pfam07478 |
D-ala D-ala ligase C-terminus; This family represents the C-terminal, catalytic domain of the ... |
136-344 |
1.71e-74 |
|
D-ala D-ala ligase C-terminus; This family represents the C-terminal, catalytic domain of the D-alanine--D-alanine ligase enzyme EC:6.3.2.4. D-Alanine is one of the central molecules of the cross-linking step of peptidoglycan assembly. There are three enzymes involved in the D-alanine branch of peptidoglycan biosynthesis: the pyridoxal phosphate-dependent D-alanine racemase (Alr), the ATP-dependent D-alanine:D-alanine ligase (Ddl), and the ATP-dependent D-alanine:D-alanine-adding enzyme (MurF).
Pssm-ID: 429483 [Multi-domain] Cd Length: 204 Bit Score: 229.13 E-value: 1.71e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 136 LAQRAGVPVAKWIAVKRFEYndPDNKKLDYEYVASQLGSDLFVKPSNQGSSVGVSHVTNEKEYKVALAEAFKYDDKVLVE 215
Cdd:pfam07478 1 LLKAAGLPVVPFVTFTRADW--KLNPKEWCAQVEEALGYPVFVKPARLGSSVGVSKVESREELQAAIEEAFQYDEKVLVE 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 216 ETVHGTEVETAVLGNDKPIVAGVGQIInAKDSFYTYENKYDDDSTStLEIPAKLPEGIVEKVRKNALKVFQATECSGLAR 295
Cdd:pfam07478 79 EGIEGREIECAVLGNEDPEVSPVGEIV-PSGGFYDYEAKYIDDSAQ-IVVPADLEEEQEEQIQELALKAYKALGCRGLAR 156
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 896127975 296 IDSMLrTEDKEVVLTEVNALPGFTNISMYPKLFEEVGIPYTDLITKLID 344
Cdd:pfam07478 157 VDFFL-TEDGEIVLNEVNTIPGFTSISMFPKLAAAAGVSFPDLVDQLIE 204
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| ddl |
PRK01966 |
D-alanine--D-alanine ligase; |
4-348 |
4.09e-156 |
|
D-alanine--D-alanine ligase;
Pssm-ID: 234993 [Multi-domain] Cd Length: 333 Bit Score: 441.48 E-value: 4.09e-156
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 4 KIKVGLIFGGNSSEYEVSIMSAHNIYEEIDTNKFDVYPMWITNDGYLANDADSRKVLDnpkmevANPHKVANISNIVELK 83
Cdd:PRK01966 3 KMRVALLFGGRSAEHEVSLVSAKSVLKALDKEKYEVVPIGITKDGRWYLIDADNMELA------DDDNDKEDLSLLILPS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 84 DRP-EIDVFFPIVHGNLGEDGCLQGLFRVLDKPFVGDDVLAAAVTMDKEMTKILAQRAGVPVAKWIAVKRFEYndpdnKK 162
Cdd:PRK01966 77 GGSeEVDVVFPVLHGPPGEDGTIQGLLELLGIPYVGCGVLASALSMDKILTKRLLAAAGIPVAPYVVLTRGDW-----EE 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 163 LDYEYVASQLGSDLFVKPSNQGSSVGVSHVTNEKEYKVALAEAFKYDDKVLVEETVHGTEVETAVLGNDkPIVAGVGQII 242
Cdd:PRK01966 152 ASLAEIEAKLGLPVFVKPANLGSSVGISKVKNEEELAAALDLAFEYDRKVLVEQGIKGREIECAVLGND-PKASVPGEIV 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 243 NAKDsFYTYENKYDDDStSTLEIPAKLPEGIVEKVRKNALKVFQATECSGLARIDSMLrTEDKEVVLTEVNALPGFTNIS 322
Cdd:PRK01966 231 KPDD-FYDYEAKYLDGS-AELIIPADLSEELTEKIRELAIKAFKALGCSGLARVDFFL-TEDGEIYLNEINTMPGFTPIS 307
|
330 340
....*....|....*....|....*.
gi 896127975 323 MYPKLFEEVGIPYTDLITKLIDYAME 348
Cdd:PRK01966 308 MYPKLWEASGLSYPELIDRLIELALE 333
|
|
| DdlA |
COG1181 |
D-alanine-D-alanine ligase or related ATP-grasp enzyme [Cell wall/membrane/envelope biogenesis, ... |
5-347 |
1.82e-128 |
|
D-alanine-D-alanine ligase or related ATP-grasp enzyme [Cell wall/membrane/envelope biogenesis, General function prediction only]; D-alanine-D-alanine ligase or related ATP-grasp enzyme is part of the Pathway/BioSystem: Mureine biosynthesis
Pssm-ID: 440794 [Multi-domain] Cd Length: 303 Bit Score: 370.21 E-value: 1.82e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 5 IKVGLIFGGNSSEYEVSIMSAHNIYEEIDTNKFDVYPMWItndgylandadsrkvldnpkmevanphkvaNISNIVELKD 84
Cdd:COG1181 1 MRVAVLFGGRSAEREVSLKSGRAVAAALDKAGYDVVPIGI------------------------------DVEDLPAALK 50
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 85 RPEIDVFFPIVHGNLGEDGCLQGLFRVLDKPFVGDDVLAAAVTMDKEMTKILAQRAGVPVAKWIAVKRFEYndpdnkkLD 164
Cdd:COG1181 51 ELKPDVVFPALHGRGGEDGTIQGLLELLGIPYTGSGVLASALAMDKALTKRVLAAAGLPTPPYVVLRRGEL-------AD 123
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 165 YEYVASQLGSDLFVKPSNQGSSVGVSHVTNEKEYKVALAEAFKYDDKVLVEETVHGTEVETAVLGNDKPIVAGVGQIInA 244
Cdd:COG1181 124 LEAIEEELGLPLFVKPAREGSSVGVSKVKNAEELAAALEEAFKYDDKVLVEEFIDGREVTVGVLGNGGPRALPPIEIV-P 202
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 245 KDSFYTYENKYDDDSTsTLEIPAKLPEGIVEKVRKNALKVFQATECSGLARIDSMLrTEDKEVVLTEVNALPGFTNISMY 324
Cdd:COG1181 203 ENGFYDYEAKYTDGGT-EYICPARLPEELEERIQELALKAFRALGCRGYARVDFRL-DEDGEPYLLEVNTLPGMTPTSLL 280
|
330 340
....*....|....*....|...
gi 896127975 325 PKLFEEVGIPYTDLITKLIDYAM 347
Cdd:COG1181 281 PKAAAAAGISYEELIERIIELAL 303
|
|
| D_ala_D_alaTIGR |
TIGR01205 |
D-alanine--D-alanine ligase; This model describes D-Ala--D-Ala ligase, an enzyme that makes a ... |
6-346 |
3.67e-110 |
|
D-alanine--D-alanine ligase; This model describes D-Ala--D-Ala ligase, an enzyme that makes a required precursor of the bacterial cell wall. It also describes some closely related proteins responsible for resistance to glycopeptide antibiotics such as vancomycin. The mechanism of glyopeptide antibiotic resistance involves the production of D-alanine-D-lactate (VanA and VanB families) or D-alanine-D-serine (VanC). The seed alignment contains only chromosomally encoded D-ala--D-ala ligases, but a number of antibiotic resistance proteins score above the trusted cutoff of this model. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273498 [Multi-domain] Cd Length: 315 Bit Score: 324.24 E-value: 3.67e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 6 KVGLIFGGNSSEYEVSIMSAHNIYEEIDTNKFDVYPMWITNDGylandadSRKVLDNPkmevanpHKVANISNIVElkdr 85
Cdd:TIGR01205 1 RVAVLFGGKSAEHEISLVSAAAVLKALRDLGYDVYPVDIDKMG-------SWTYKDLP-------QLILELGALLE---- 62
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 86 pEIDVFFPIVHGNLGEDGCLQGLFRVLDKPFVGDDVLAAAVTMDKEMTKILAQRAGVPVAKWIAVKRFEYNDPdnkKLDY 165
Cdd:TIGR01205 63 -GIDVVFPVLHGRYGEDGTIQGLLELMGIPYTGSGVLASALSMDKLLTKLLWKALGLPTPDYIVLTQNRASAD---ELEC 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 166 EYVASQLGSDLFVKPSNQGSSVGVSHVTNEKEYKVALAEAFKYDDKVLVEETVHGTEVETAVLGNDK--PIVAGVGQIin 243
Cdd:TIGR01205 139 EQVAEPLGFPVIVKPAREGSSVGVSKVKSEEELQAALDEAFEYDEEVLVEQFIKGRELEVSILGNEEalPIIEIVPEI-- 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 244 akDSFYTYENKYDDDSTSTLeIPAKLPEGIVEKVRKNALKVFQATECSGLARIDSMLrTEDKEVVLTEVNALPGFTNISM 323
Cdd:TIGR01205 217 --EGFYDYEAKYLDGSTEYV-IPAPLDEELEEKIKELALKAYKALGCRGLARVDFFL-DEEGEIYLNEINTIPGMTAISL 292
|
330 340
....*....|....*....|...
gi 896127975 324 YPKLFEEVGIPYTDLITKLIDYA 346
Cdd:TIGR01205 293 FPKAAAAAGIEFSQLVERILELA 315
|
|
| ddl |
PRK01372 |
D-alanine--D-alanine ligase; Reviewed |
1-349 |
2.19e-88 |
|
D-alanine--D-alanine ligase; Reviewed
Pssm-ID: 234948 [Multi-domain] Cd Length: 304 Bit Score: 268.13 E-value: 2.19e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 1 MTDKIKVGLIFGGNSSEYEVSIMSAHNIYEEIDTNKFDVYPMwitndgylanDADSRKVldnpkmevanphkvanisniV 80
Cdd:PRK01372 1 PKMFGKVAVLMGGTSAEREVSLNSGAAVLAALREAGYDAHPI----------DPGEDIA--------------------A 50
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 81 ELKDRpEIDVFFPIVHGNLGEDGCLQGLFRVLDKPFVGDDVLAAAVTMDKEMTKILAQRAGVPVAKWIAVKRFEyndpdn 160
Cdd:PRK01372 51 QLKEL-GFDRVFNALHGRGGEDGTIQGLLELLGIPYTGSGVLASALAMDKLRTKLVWQAAGLPTPPWIVLTREE------ 123
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 161 kklDYEYVASQLGSDLFVKPSNQGSSVGVSHVTNEKEYKVALAEAFKYDDKVLVEETVHGTEVETAVLGnDK--PIVAgv 238
Cdd:PRK01372 124 ---DLLAAIDKLGLPLVVKPAREGSSVGVSKVKEEDELQAALELAFKYDDEVLVEKYIKGRELTVAVLG-GKalPVIE-- 197
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 239 gqiINAKDSFYTYENKYDDDSTSTLeIPAKLPEGIVEKVRKNALKVFQATECSGLARIDSMLrTEDKEVVLTEVNALPGF 318
Cdd:PRK01372 198 ---IVPAGEFYDYEAKYLAGGTQYI-CPAGLPAEIEAELQELALKAYRALGCRGWGRVDFML-DEDGKPYLLEVNTQPGM 272
|
330 340 350
....*....|....*....|....*....|.
gi 896127975 319 TNISMYPKLFEEVGIPYTDLITKLIDYAMER 349
Cdd:PRK01372 273 TSHSLVPMAARAAGISFSELVDRILEDALCD 303
|
|
| Dala_Dala_lig_C |
pfam07478 |
D-ala D-ala ligase C-terminus; This family represents the C-terminal, catalytic domain of the ... |
136-344 |
1.71e-74 |
|
D-ala D-ala ligase C-terminus; This family represents the C-terminal, catalytic domain of the D-alanine--D-alanine ligase enzyme EC:6.3.2.4. D-Alanine is one of the central molecules of the cross-linking step of peptidoglycan assembly. There are three enzymes involved in the D-alanine branch of peptidoglycan biosynthesis: the pyridoxal phosphate-dependent D-alanine racemase (Alr), the ATP-dependent D-alanine:D-alanine ligase (Ddl), and the ATP-dependent D-alanine:D-alanine-adding enzyme (MurF).
Pssm-ID: 429483 [Multi-domain] Cd Length: 204 Bit Score: 229.13 E-value: 1.71e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 136 LAQRAGVPVAKWIAVKRFEYndPDNKKLDYEYVASQLGSDLFVKPSNQGSSVGVSHVTNEKEYKVALAEAFKYDDKVLVE 215
Cdd:pfam07478 1 LLKAAGLPVVPFVTFTRADW--KLNPKEWCAQVEEALGYPVFVKPARLGSSVGVSKVESREELQAAIEEAFQYDEKVLVE 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 216 ETVHGTEVETAVLGNDKPIVAGVGQIInAKDSFYTYENKYDDDSTStLEIPAKLPEGIVEKVRKNALKVFQATECSGLAR 295
Cdd:pfam07478 79 EGIEGREIECAVLGNEDPEVSPVGEIV-PSGGFYDYEAKYIDDSAQ-IVVPADLEEEQEEQIQELALKAYKALGCRGLAR 156
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 896127975 296 IDSMLrTEDKEVVLTEVNALPGFTNISMYPKLFEEVGIPYTDLITKLID 344
Cdd:pfam07478 157 VDFFL-TEDGEIVLNEVNTIPGFTSISMFPKLAAAAGVSFPDLVDQLIE 204
|
|
| PRK14570 |
PRK14570 |
D-alanyl-alanine synthetase A; Provisional |
9-354 |
3.76e-60 |
|
D-alanyl-alanine synthetase A; Provisional
Pssm-ID: 173034 [Multi-domain] Cd Length: 364 Bit Score: 197.75 E-value: 3.76e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 9 LIFGGNSSEYEVSIMSAHNIYEEI-DTNKFDVYPMWI---TNDGYLANdadsrKVLDNPKMevANPHKVANISNI----- 79
Cdd:PRK14570 7 LIFGGVSFEHEISLRSAYGIYSALlKLDKYNIYSVFIdkcTGIWYLLD-----SVPDPPKL--IKRDVLPIVSLIpgcgi 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 80 -VELKDRpEIDVFFPIVHGNLGEDGCLQGLFRVLDKPFVGDDVLAAAVTMDKEMTKILAQRAGVPVAKWIAVKRFEYN-D 157
Cdd:PRK14570 80 fVNNKNL-EIDVVFPIVHGRTGEDGAIQGFLKVMDIPCVGAGILGSAISINKYFCKLLLKSFNIPLVPFIGFRKYDYFlD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 158 PDNKKLDyeyVASQLGSDLFVKPSNQGSSVGVSHVTNEKEYKVALAEAFKYDDKVLVEETVHGTEVETAVLGNDKPIVAG 237
Cdd:PRK14570 159 KEGIKKD---IKEVLGYPVIVKPAVLGSSIGINVAYNENQIEKCIEEAFKYDLTVVIEKFIEAREIECSVIGNEQIKIFT 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 238 VGQIINAKDSFYTYENKYD--DDSTSTLEIPAKLPEGIVEKVRKNALKVFQATECSGLARIDSMLRTEDKEVVLTEVNAL 315
Cdd:PRK14570 236 PGEIVVQDFIFYDYDAKYStiPGNSIVFNIPAHLDTKHLLDIKEYAFLTYKNLELRGMARIDFLIEKDTGLIYLNEINTI 315
|
330 340 350
....*....|....*....|....*....|....*....
gi 896127975 316 PGFTNISMYPKLFEEVGIPYTDLITKLIDYAMERYDHKK 354
Cdd:PRK14570 316 PGFTDISMFAKMCEHDGLQYKSLVDNLIDLAFQSYIKRK 354
|
|
| PRK14573 |
PRK14573 |
bifunctional UDP-N-acetylmuramate--L-alanine ligase/D-alanine--D-alanine ligase; |
4-356 |
1.25e-50 |
|
bifunctional UDP-N-acetylmuramate--L-alanine ligase/D-alanine--D-alanine ligase;
Pssm-ID: 184752 [Multi-domain] Cd Length: 809 Bit Score: 180.78 E-value: 1.25e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 4 KIKVGLIFGGNSSEYEVSIMSAHNIYEEIDTNKFDVYPMWITNDGYLANDADsrkvLDNPKMEVANPHKVAniSNIVELK 83
Cdd:PRK14573 451 KLSLGLVCGGKSCEHDISLLSAKNIAKYLSPEFYDVSYFLINRQGLWETVSS----LETAIEEDSGKSVLS--SEIAQAL 524
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 84 DRpeIDVFFPIVHGNLGEDGCLQGLFRVLDKPFVGDDVLAAAVTMDKEMTKILAQRAGVPVAKWIAVK-RFEYNDPDnkk 162
Cdd:PRK14573 525 AK--VDVVLPILHGPFGEDGTMQGFLEIIGKPYTGPSLAFSAIAMDKVLTKRFASDVGVPVVPYQPLTlAGWKREPE--- 599
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 163 LDYEYVASQLGSDLFVKPSNQGSSVGVSHVTNEKEYKVALAEAFKYDDKVLVEETVHGT-EVETAVLGNDKP--IVAGVG 239
Cdd:PRK14573 600 LCLAHIVEAFSFPMFVKTAHLGSSIGVFEVHNVEELRDKISEAFLYDTDVFVEESRLGSrEIEVSCLGDGSSayVIAGPH 679
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 240 QIINAKdSFYTYENKY--DDDSTSTLEIPAKLPEGIVEKVRKNALKVFQATECSGLARIDSMLrTEDKEVVLTEVNALPG 317
Cdd:PRK14573 680 ERRGSG-GFIDYQEKYglSGKSSAQIVFDLDLSKESQEQVLELAERIYRLLQGKGSCRIDFFL-DEEGNFWLSEMNPIPG 757
|
330 340 350
....*....|....*....|....*....|....*....
gi 896127975 318 FTNISMYPKLFEEVGIPYTDLITKLIDYAMERYDHKKTL 356
Cdd:PRK14573 758 MTEASPFLTAFVRKGWTYEQIVHQLIIDGLHKFDQRQRL 796
|
|
| PRK14572 |
PRK14572 |
D-alanyl-alanine synthetase A; Provisional |
4-348 |
2.38e-50 |
|
D-alanyl-alanine synthetase A; Provisional
Pssm-ID: 173036 [Multi-domain] Cd Length: 347 Bit Score: 171.63 E-value: 2.38e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 4 KIKVGLIFGGNSSEYEVSIMSAHNIYEEIDTNKFDVYPMWITNDGYLANDADSRKVLDNP--------KMEVANPHKVAN 75
Cdd:PRK14572 1 MAKIAVFFGGSSTEHSISIRTGCFICATLHTMGHSVKPILLTPDGGWVVPTVYRPSIPDEsgnsedlfLEEFQKANGVSE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 76 ISNIVELkdrpEIDVFFPIVHGNLGEDGCLQGLFRVLDKPFVGDDVLAAAVTMDKEMTKILAQRAGVPVAKWIAVKRFEY 155
Cdd:PRK14572 81 PADISQL----DADIAFLGLHGGAGEDGRIQGFLDTLGIPYTGSGVLASALAMDKTRANQIFLQSGQKVAPFFELEKLKY 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 156 -NDPDNKKLDYEyvasQLGSDLFVKPSNQGSSVGVSHVTNEKEYKVALAEAFKYDDKVLVEETVHGTEVETAVL-----G 229
Cdd:PRK14572 157 lNSPRKTLLKLE----SLGFPQFLKPVEGGSSVSTYKITNAEQLMTLLALIFESDSKVMSQSFLSGTEVSCGVLeryrgG 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 230 NDKPIvAGVGQIINAKDSFYTYENKYDDDSTSTLeIPAKLPEGIVEKVRKNALKVFQATECSGLARIDSMLrtEDKEVVL 309
Cdd:PRK14572 233 KRNPI-ALPATEIVPGGEFFDFESKYKQGGSEEI-TPARISDQEMKRVQELAIRAHESLGCKGYSRTDFII--VDGEPHI 308
|
330 340 350
....*....|....*....|....*....|....*....
gi 896127975 310 TEVNALPGFTNISMYPKLFEEVGIPYTDLITKLIDYAME 348
Cdd:PRK14572 309 LETNTLPGMTETSLIPQQAKAAGINMEEVFTDLIEIGLK 347
|
|
| Dala_Dala_lig_N |
pfam01820 |
D-ala D-ala ligase N-terminus; This family represents the N-terminal region of the ... |
6-118 |
3.62e-39 |
|
D-ala D-ala ligase N-terminus; This family represents the N-terminal region of the D-alanine--D-alanine ligase enzyme EC:6.3.2.4 which is thought to be involved in substrate binding. D-Alanine is one of the central molecules of the cross-linking step of peptidoglycan assembly. There are three enzymes involved in the D-alanine branch of peptidoglycan biosynthesis: the pyridoxal phosphate-dependent D-alanine racemase (Alr), the ATP-dependent D-alanine:D-alanine ligase (Ddl), and the ATP-dependent D-alanine:D-alanine-adding enzyme (MurF). This domain is structurally related to the PreATP-grasp domain.
Pssm-ID: 460346 [Multi-domain] Cd Length: 118 Bit Score: 135.04 E-value: 3.62e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 6 KVGLIFGGNSSEYEVSIMSAHNIYEEIDTNKFDVYPMWITNDGYLANDADSRKVLDNPKMEVANPHKVANISNIVELKDR 85
Cdd:pfam01820 1 KVAVLFGGRSSEHEVSLVSARSVLKALDKEKYEVIPIGITKDGRLGEAALRELASDDGLLLEVDDAPDGGPAGLLFGPNV 80
|
90 100 110
....*....|....*....|....*....|....*..
gi 896127975 86 PE----IDVFFPIVHGNLGEDGCLQGLFRVLDKPFVG 118
Cdd:pfam01820 81 LEllieVDVVFPVLHGPNGEDGTLQGLLELAGIPYVG 117
|
|
| PRK14571 |
PRK14571 |
D-alanyl-alanine synthetase A; Provisional |
5-346 |
4.11e-34 |
|
D-alanyl-alanine synthetase A; Provisional
Pssm-ID: 184751 [Multi-domain] Cd Length: 299 Bit Score: 127.63 E-value: 4.11e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 5 IKVGLIFGGNSSEYEVSIMSAHNIYEEIDTNKFDVYPMWItndgylanDADSRKVLDnpkmevanphkvanisnivELKd 84
Cdd:PRK14571 1 MRVALLMGGVSREREISLRSGERVKKALEKLGYEVTVFDV--------DEDFLKKVD-------------------QLK- 52
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 85 rpEIDVFFPIVHGNLGEDGCLQGLFRVLDKPFVGDDVLAAAVTMDKEMTKILAQRAgVPVAKWIAVKRFEYNDPdnkkld 164
Cdd:PRK14571 53 --SFDVVFNVLHGTFGEDGTLQAILDFLGIRYTGSDAFSSMICFDKLLTYRFLKGT-VEIPDFVEIKEFMKTSP------ 123
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 165 yeyvasqLGSDLFVKPSNQGSSVGVSHVTNEKEYKVALAEAFKYDDKVLVEETVHGTEVETAVLGNDK-----PIVAgvg 239
Cdd:PRK14571 124 -------LGYPCVVKPRREGSSIGVFICESDEEFQHALKEDLPRYGSVIVQEYIPGREMTVSILETEKgfevlPILE--- 193
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 240 qiINAKDSFYTYENKYDDDSTSTLeIPAKLPEGIVEKVRKNALKVFQATECSGLARIDSMLRteDKEVVLTEVNALPGFT 319
Cdd:PRK14571 194 --LRPKRRFYDYVAKYTKGETEFI-LPAPLNPEEERLVKETALKAFVEAGCRGFGRVDGIFS--DGRFYFLEINTVPGLT 268
|
330 340
....*....|....*....|....*..
gi 896127975 320 NISMYPKLFEEVGIPYTDLITKLIDYA 346
Cdd:PRK14571 269 ELSDLPASAKAGGIEFEELVDIIIKSA 295
|
|
| PRK14569 |
PRK14569 |
D-alanyl-alanine synthetase A; Provisional |
6-346 |
2.43e-25 |
|
D-alanyl-alanine synthetase A; Provisional
Pssm-ID: 173033 [Multi-domain] Cd Length: 296 Bit Score: 103.60 E-value: 2.43e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 6 KVGLIFGGNSSEYEVSIMSAHNIYEEIDTNKFDVYPMwitndgylanDADSRKVldnpkmevanphkvanISNIVELKDr 85
Cdd:PRK14569 5 KIVVLYGGDSPEREVSLKSGKAVLDSLISQGYDAVGV----------DASGKEL----------------VAKLLELKP- 57
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 86 peiDVFFPIVHGNLGEDGCLQGLFRVLDKPFVGDDVLAAAVTMDKEMTK--ILAQRAGVPVAKWIAVKRFEyndpdnkkl 163
Cdd:PRK14569 58 ---DKCFVALHGEDGENGRVSALLEMLEIKHTSSSMKSSVITMDKMISKeiLMHHRMPTPMAKFLTDKLVA--------- 125
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 164 dyeyvASQLGSDLFVKPSNQGSSVGVSHVTNEKEYKVALAEAFKYDDkVLVEETVHGTEVETAVLGNDkpIVAGVGqiIN 243
Cdd:PRK14569 126 -----EDEISFPVAVKPSSGGSSIATFKVKSIQELKHAYEEASKYGE-VMIEQWVTGKEITVAIVNDE--VYSSVW--IE 195
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 244 AKDSFYTYENKYddDSTSTLEIPAKLPEGIVEKVRKNALKVFQATECSGLARIDsMLRTEDKEVVLTEVNALPGFTNISM 323
Cdd:PRK14569 196 PQNEFYDYESKY--SGKSIYHSPSGLCEQKELEVRQLAKKAYDLLGCSGHARVD-FIYDDRGNFYIMEINSSPGMTDNSL 272
|
330 340
....*....|....*....|...
gi 896127975 324 YPKLFEEVGIPYTDLITKLIDYA 346
Cdd:PRK14569 273 SPKSAAAEGVDFDSFVKRIIEQA 295
|
|
| AccC |
COG0439 |
Biotin carboxylase [Lipid transport and metabolism]; Biotin carboxylase is part of the Pathway ... |
122-347 |
8.78e-17 |
|
Biotin carboxylase [Lipid transport and metabolism]; Biotin carboxylase is part of the Pathway/BioSystem: Fatty acid biosynthesis
Pssm-ID: 440208 [Multi-domain] Cd Length: 263 Bit Score: 79.15 E-value: 8.78e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 122 LAAAVTM-DKEMTKILAQRAGVPVAKWIAVKRFEyndpdnkklDYEYVASQLGSDLFVKPSNQGSSVGVSHVTNEKEYKV 200
Cdd:COG0439 46 PEAIRAMrDKVLMREALAAAGVPVPGFALVDSPE---------EALAFAEEIGYPVVVKPADGAGSRGVRVVRDEEELEA 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 201 ALAEAFKY------DDKVLVEETVHGTEVETAVLG-NDKPIVAGVGQIINAKDSFYTYENkydddststlEIPAKLPEGI 273
Cdd:COG0439 117 ALAEARAEakagspNGEVLVEEFLEGREYSVEGLVrDGEVVVCSITRKHQKPPYFVELGH----------EAPSPLPEEL 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 274 VEKVRKNALKVFQATecsGLAR----IDsMLRTEDKEVVLTEVNA-LPGftniSMYPKLFEEV-GIpytDLITKLIDYAM 347
Cdd:COG0439 187 RAEIGELVARALRAL---GYRRgafhTE-FLLTPDGEPYLIEINArLGG----EHIPPLTELAtGV---DLVREQIRLAL 255
|
|
| LysX |
COG0189 |
Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily [Amino acid transport ... |
110-349 |
7.01e-10 |
|
Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily [Amino acid transport and metabolism, Coenzyme transport and metabolism, Translation, ribosomal structure and biogenesis, Secondary metabolites biosynthesis, transport and catabolism]; Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily is part of the Pathway/BioSystem: Lysine biosynthesis
Pssm-ID: 439959 [Multi-domain] Cd Length: 289 Bit Score: 59.18 E-value: 7.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 110 RVLDKPFvgddvlAAAVTMDKEMTKILAQRAGVPVAKWIAVKRFEyndpdnkklDYEYVASQLGSDLFVKPSNQGSSVGV 189
Cdd:COG0189 83 PVVNDPE------AIRRARDKLFTLQLLARAGIPVPPTLVTRDPD---------DLRAFLEELGGPVVLKPLDGSGGRGV 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 190 SHVTNEKEYKVALAEAFKYDDK-VLVEE---TVHGTEVETAVLGnDKPIVAgvGQIINAKDSFYTyeNKYDDDSTSTLEI 265
Cdd:COG0189 148 FLVEDEDALESILEALTELGSEpVLVQEfipEEDGRDIRVLVVG-GEPVAA--IRRIPAEGEFRT--NLARGGRAEPVEL 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 266 PAKLpEGIVEKVRKnALKVfqatecsGLARIDsMLRTEDKeVVLTEVNALPGFTNISMYPKLfeevgipytDLITKLIDY 345
Cdd:COG0189 223 TDEE-RELALRAAP-ALGL-------DFAGVD-LIEDDDG-PLVLEVNVTPGFRGLERATGV---------DIAEAIADY 282
|
....
gi 896127975 346 AMER 349
Cdd:COG0189 283 LEAR 286
|
|
| PRK14016 |
PRK14016 |
cyanophycin synthetase; Provisional |
123-222 |
1.19e-07 |
|
cyanophycin synthetase; Provisional
Pssm-ID: 237586 [Multi-domain] Cd Length: 727 Bit Score: 53.62 E-value: 1.19e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 123 AAAVTM--DKEMTKILAQRAGVPVAKWIAVKRFEyndpdnkklDYEYVASQLGSDLFVKPS--NQGSsvGVS-HVTNEKE 197
Cdd:PRK14016 206 AIAVDIacDKELTKRLLAAAGVPVPEGRVVTSAE---------DAWEAAEEIGYPVVVKPLdgNHGR--GVTvNITTREE 274
|
90 100
....*....|....*....|....*
gi 896127975 198 YKVALAEAFKYDDKVLVEETVHGTE 222
Cdd:PRK14016 275 IEAAYAVASKESSDVIVERYIPGKD 299
|
|
| PRK02471 |
PRK02471 |
bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB; |
134-231 |
4.44e-07 |
|
bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB;
Pssm-ID: 179427 [Multi-domain] Cd Length: 752 Bit Score: 51.85 E-value: 4.44e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 134 KILAQrAGVPVAKWIavkrfEYNDPDNKKLDYEYVAsqlGSDLFVKPSNQGSSVGVS---HVTNEKEYKVALAEAFKYDD 210
Cdd:PRK02471 494 KILAE-AGFPVPAGD-----EFTSLEEALADYSLFA---DKAIVVKPKSTNFGLGISifkEPASLEDYEKALEIAFREDS 564
|
90 100
....*....|....*....|.
gi 896127975 211 KVLVEETVHGTEVETAVLGND 231
Cdd:PRK02471 565 SVLVEEFIVGTEYRFFVLDGK 585
|
|
| COG3919 |
COG3919 |
Predicted ATP-dependent carboligase, ATP-grasp superfamily [General function prediction only]; |
76-320 |
6.35e-05 |
|
Predicted ATP-dependent carboligase, ATP-grasp superfamily [General function prediction only];
Pssm-ID: 443124 [Multi-domain] Cd Length: 382 Bit Score: 44.53 E-value: 6.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 76 ISNIVELKDRPEIDVFFPI-------VHGNLGEdgcLQGLFRVldkPFVGDDVLAAAvtMDKEMTKILAQRAGVPVAKWI 148
Cdd:COG3919 65 VDALLELAERHGPDVLIPTgdeyvelLSRHRDE---LEEHYRL---PYPDADLLDRL--LDKERFYELAEELGVPVPKTV 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 149 AVKRFEYNDPDNKKLDYEYVasqlgsdlfVKPSNQGS--------SVGVSHVTNEKEYKVALAEAFKYDDKVLVEETVHG 220
Cdd:COG3919 137 VLDSADDLDALAEDLGFPVV---------VKPADSVGydelsfpgKKKVFYVDDREELLALLRRIAAAGYELIVQEYIPG 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 221 TEVETAVLG-----NDKPIVAGVGQII-NAKDSFytyenkydddSTSTLEIPAKLPEgIVEKVRknalKVFQATECSGLA 294
Cdd:COG3919 208 DDGEMRGLTayvdrDGEVVATFTGRKLrHYPPAG----------GNSAARESVDDPE-LEEAAR----RLLEALGYHGFA 272
|
250 260
....*....|....*....|....*.
gi 896127975 295 RIDSMLRTEDKEVVLTEVNALPGFTN 320
Cdd:COG3919 273 NVEFKRDPRDGEYKLIEINPRFWRSL 298
|
|
| PRK12767 |
PRK12767 |
carbamoyl phosphate synthase-like protein; Provisional |
128-228 |
1.15e-03 |
|
carbamoyl phosphate synthase-like protein; Provisional
Pssm-ID: 237195 [Multi-domain] Cd Length: 326 Bit Score: 40.25 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 128 MDK-EMTKILAQRaGVPVAKWIAVKRFEyndpdnkKLDYEYVASQLGSDLFVKPSNQGSSVGVSHVTNEKEykvaLAEAF 206
Cdd:PRK12767 110 NDKwLTYEFLKEN-GIPTPKSYLPESLE-------DFKAALAKGELQFPLFVKPRDGSASIGVFKVNDKEE----LEFLL 177
|
90 100
....*....|....*....|..
gi 896127975 207 KYDDKVLVEETVHGTEVETAVL 228
Cdd:PRK12767 178 EYVPNLIIQEFIEGQEYTVDVL 199
|
|
| PRK07206 |
PRK07206 |
hypothetical protein; Provisional |
111-222 |
4.74e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 180883 [Multi-domain] Cd Length: 416 Bit Score: 38.86 E-value: 4.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127975 111 VLDKPFVGDDVLAAAVTMDKEMTKILAQrAGVPVAKWIAVkrfeyNDPDnKKLDYEYVASQLGSDLFVKPSNQGSSVGVS 190
Cdd:PRK07206 91 ILTPQYSNDPALSSARRNKAEMINALAE-AGLPAARQINT-----ADWE-EAEAWLRENGLIDRPVVIKPLESAGSDGVF 163
|
90 100 110
....*....|....*....|....*....|....*....
gi 896127975 191 HVTNEKEYKVA----LAEAFKYD---DKVLVEETVHGTE 222
Cdd:PRK07206 164 ICPAKGDWKHAfnaiLGKANKLGlvnETVLVQEYLIGTE 202
|
|
| |
