NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|896127997|ref|WP_049149493|]
View 

glycosyltransferase family 2 protein [Lactobacillus gasseri]

Protein Classification

glycosyltransferase family 2 protein( domain architecture ID 11421525)

glycosyltransferase family 2 protein catalyzes the transfer of saccharide moieties from a donor to an acceptor to form glycosidic bonds

CAZY:  GT2
EC:  2.4.-.-
Gene Ontology:  GO:0016757
PubMed:  16037492|18518825

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
WcaA COG0463
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ...
4-189 2.41e-36

Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis];


:

Pssm-ID: 440231 [Multi-domain]  Cd Length: 208  Bit Score: 128.67  E-value: 2.41e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   4 QPMLTVIMPVYNMEKYLGRALEALAKQKDKNFKLLIVNDGSKDKTREVAEGYRDRFLYFDII-NKKNGGLSDARNVGMAH 82
Cdd:COG0463    1 MPLVSVVIPTYNEEEYLEEALESLLAQTYPDFEIIVVDDGSTDGTAEILRELAAKDPRIRVIrLERNRGKGAARNAGLAA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997  83 VTTPYFTFHDGDDWVDPGYTAYFVRAFDEHPdVDIVSCGFWIDsekrheshpvgnkqsGGLIDKREAYLKMTNVFGSPVK 162
Cdd:COG0463   81 ARGDYIAFLDADDQLDPEKLEELVAALEEGP-ADLVYGSRLIR---------------EGESDLRRLGSRLFNLVRLLTN 144
                        170       180       190
                 ....*....|....*....|....*....|..
gi 896127997 163 GYTWNKGYKI---SVVKK--YHLRFVEDLAFM 189
Cdd:COG0463  145 LPDSTSGFRLfrrEVLEElgFDEGFLEDTELL 176
 
Name Accession Description Interval E-value
WcaA COG0463
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ...
4-189 2.41e-36

Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440231 [Multi-domain]  Cd Length: 208  Bit Score: 128.67  E-value: 2.41e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   4 QPMLTVIMPVYNMEKYLGRALEALAKQKDKNFKLLIVNDGSKDKTREVAEGYRDRFLYFDII-NKKNGGLSDARNVGMAH 82
Cdd:COG0463    1 MPLVSVVIPTYNEEEYLEEALESLLAQTYPDFEIIVVDDGSTDGTAEILRELAAKDPRIRVIrLERNRGKGAARNAGLAA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997  83 VTTPYFTFHDGDDWVDPGYTAYFVRAFDEHPdVDIVSCGFWIDsekrheshpvgnkqsGGLIDKREAYLKMTNVFGSPVK 162
Cdd:COG0463   81 ARGDYIAFLDADDQLDPEKLEELVAALEEGP-ADLVYGSRLIR---------------EGESDLRRLGSRLFNLVRLLTN 144
                        170       180       190
                 ....*....|....*....|....*....|..
gi 896127997 163 GYTWNKGYKI---SVVKK--YHLRFVEDLAFM 189
Cdd:COG0463  145 LPDSTSGFRLfrrEVLEElgFDEGFLEDTELL 176
Glyco_tranf_GTA_type cd00761
Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a ...
9-120 8.98e-36

Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold; Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.


Pssm-ID: 132997 [Multi-domain]  Cd Length: 156  Bit Score: 125.31  E-value: 8.98e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   9 VIMPVYNMEKYLGRALEALAKQKDKNFKLLIVNDGSKDKTREVAEGYRDRFLYFD-IINKKNGGLSDARNVGMAHVTTPY 87
Cdd:cd00761    1 VIIPAYNEEPYLERCLESLLAQTYPNFEVIVVDDGSTDGTLEILEEYAKKDPRVIrVINEENQGLAAARNAGLKAARGEY 80
                         90       100       110
                 ....*....|....*....|....*....|...
gi 896127997  88 FTFHDGDDWVDPGYTAYFVRAFDEHPDVDIVSC 120
Cdd:cd00761   81 ILFLDADDLLLPDWLERLVAELLADPEADAVGG 113
Glycos_transf_2 pfam00535
Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, ...
8-177 5.04e-30

Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.


Pssm-ID: 425738 [Multi-domain]  Cd Length: 166  Bit Score: 110.95  E-value: 5.04e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997    8 TVIMPVYNMEKYLGRALEALAKQKDKNFKLLIVNDGSKDKTREVAEGYRDRFL-YFDIINKKNGGLSDARNVGMAHVTTP 86
Cdd:pfam00535   1 SVIIPTYNEEKYLLETLESLLNQTYPNFEIIVVDDGSTDGTVEIAEEYAKKDPrVRVIRLPENRGKAGARNAGLRAATGD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   87 YFTFHDGDDWVDPGYTAYFVRAFDEHPdVDIVSCGFWIDSEKRHESHPVGNKQSGGLIDKREAYLKMTNVFGspvkGYTW 166
Cdd:pfam00535  81 YIAFLDADDEVPPDWLEKLVEALEEDG-ADVVVGSRYVIFGETGEYRRASRITLSRLPFFLGLRLLGLNLPF----LIGG 155
                         170
                  ....*....|.
gi 896127997  167 NKGYKISVVKK 177
Cdd:pfam00535 156 FALYRREALEE 166
PRK10073 PRK10073
putative glycosyl transferase; Provisional
5-247 6.94e-29

putative glycosyl transferase; Provisional


Pssm-ID: 182223 [Multi-domain]  Cd Length: 328  Bit Score: 112.06  E-value: 6.94e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   5 PMLTVIMPVYNMEKYLGRALEALAKQKDKNFKLLIVNDGSKDKTREVAEGYRDRFLYFDIINKKNGGLSDARNVGMAHVT 84
Cdd:PRK10073   6 PKLSIIIPLYNAGKDFRAFMESLIAQTWTALEIIIVNDGSTDNSVEIAKHYAENYPHVRLLHQANAGVSVARNTGLAVAT 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997  85 TPYFTFHDGDDWVDPG-YTAYFVRAFDEhpDVDIVSC-GFWIDSEKRH--ESHPVGNKQSGGLIDKREaYLKM------- 153
Cdd:PRK10073  86 GKYVAFPDADDVVYPTmYETLMTMALED--DLDVAQCnADWCFRDTGEtwQSIPSDRLRSTGVLSGPD-WLRMalssrrw 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997 154 TNVfgspvkgyTWNKGYKISVVKKYHLRFV-----EDLAFMEDQIFNVKYVSltngfyYSPTPYYHYWqradsmVHDLNP 228
Cdd:PRK10073 163 THV--------VWLGVYRRDFIVKNNIKFEpglhhQDIPWTTEVMFNALRVR------YTEQSLYKYY------LHDTSV 222
                        250
                 ....*....|....*....
gi 896127997 229 KKIPDNFRANYRVWHQIIK 247
Cdd:PRK10073 223 SRLPRQGNKNLNYQRHYIK 241
 
Name Accession Description Interval E-value
WcaA COG0463
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ...
4-189 2.41e-36

Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440231 [Multi-domain]  Cd Length: 208  Bit Score: 128.67  E-value: 2.41e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   4 QPMLTVIMPVYNMEKYLGRALEALAKQKDKNFKLLIVNDGSKDKTREVAEGYRDRFLYFDII-NKKNGGLSDARNVGMAH 82
Cdd:COG0463    1 MPLVSVVIPTYNEEEYLEEALESLLAQTYPDFEIIVVDDGSTDGTAEILRELAAKDPRIRVIrLERNRGKGAARNAGLAA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997  83 VTTPYFTFHDGDDWVDPGYTAYFVRAFDEHPdVDIVSCGFWIDsekrheshpvgnkqsGGLIDKREAYLKMTNVFGSPVK 162
Cdd:COG0463   81 ARGDYIAFLDADDQLDPEKLEELVAALEEGP-ADLVYGSRLIR---------------EGESDLRRLGSRLFNLVRLLTN 144
                        170       180       190
                 ....*....|....*....|....*....|..
gi 896127997 163 GYTWNKGYKI---SVVKK--YHLRFVEDLAFM 189
Cdd:COG0463  145 LPDSTSGFRLfrrEVLEElgFDEGFLEDTELL 176
Glyco_tranf_GTA_type cd00761
Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a ...
9-120 8.98e-36

Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold; Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.


Pssm-ID: 132997 [Multi-domain]  Cd Length: 156  Bit Score: 125.31  E-value: 8.98e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   9 VIMPVYNMEKYLGRALEALAKQKDKNFKLLIVNDGSKDKTREVAEGYRDRFLYFD-IINKKNGGLSDARNVGMAHVTTPY 87
Cdd:cd00761    1 VIIPAYNEEPYLERCLESLLAQTYPNFEVIVVDDGSTDGTLEILEEYAKKDPRVIrVINEENQGLAAARNAGLKAARGEY 80
                         90       100       110
                 ....*....|....*....|....*....|...
gi 896127997  88 FTFHDGDDWVDPGYTAYFVRAFDEHPDVDIVSC 120
Cdd:cd00761   81 ILFLDADDLLLPDWLERLVAELLADPEADAVGG 113
Glycos_transf_2 pfam00535
Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, ...
8-177 5.04e-30

Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.


Pssm-ID: 425738 [Multi-domain]  Cd Length: 166  Bit Score: 110.95  E-value: 5.04e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997    8 TVIMPVYNMEKYLGRALEALAKQKDKNFKLLIVNDGSKDKTREVAEGYRDRFL-YFDIINKKNGGLSDARNVGMAHVTTP 86
Cdd:pfam00535   1 SVIIPTYNEEKYLLETLESLLNQTYPNFEIIVVDDGSTDGTVEIAEEYAKKDPrVRVIRLPENRGKAGARNAGLRAATGD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   87 YFTFHDGDDWVDPGYTAYFVRAFDEHPdVDIVSCGFWIDSEKRHESHPVGNKQSGGLIDKREAYLKMTNVFGspvkGYTW 166
Cdd:pfam00535  81 YIAFLDADDEVPPDWLEKLVEALEEDG-ADVVVGSRYVIFGETGEYRRASRITLSRLPFFLGLRLLGLNLPF----LIGG 155
                         170
                  ....*....|.
gi 896127997  167 NKGYKISVVKK 177
Cdd:pfam00535 156 FALYRREALEE 166
PRK10073 PRK10073
putative glycosyl transferase; Provisional
5-247 6.94e-29

putative glycosyl transferase; Provisional


Pssm-ID: 182223 [Multi-domain]  Cd Length: 328  Bit Score: 112.06  E-value: 6.94e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   5 PMLTVIMPVYNMEKYLGRALEALAKQKDKNFKLLIVNDGSKDKTREVAEGYRDRFLYFDIINKKNGGLSDARNVGMAHVT 84
Cdd:PRK10073   6 PKLSIIIPLYNAGKDFRAFMESLIAQTWTALEIIIVNDGSTDNSVEIAKHYAENYPHVRLLHQANAGVSVARNTGLAVAT 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997  85 TPYFTFHDGDDWVDPG-YTAYFVRAFDEhpDVDIVSC-GFWIDSEKRH--ESHPVGNKQSGGLIDKREaYLKM------- 153
Cdd:PRK10073  86 GKYVAFPDADDVVYPTmYETLMTMALED--DLDVAQCnADWCFRDTGEtwQSIPSDRLRSTGVLSGPD-WLRMalssrrw 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997 154 TNVfgspvkgyTWNKGYKISVVKKYHLRFV-----EDLAFMEDQIFNVKYVSltngfyYSPTPYYHYWqradsmVHDLNP 228
Cdd:PRK10073 163 THV--------VWLGVYRRDFIVKNNIKFEpglhhQDIPWTTEVMFNALRVR------YTEQSLYKYY------LHDTSV 222
                        250
                 ....*....|....*....
gi 896127997 229 KKIPDNFRANYRVWHQIIK 247
Cdd:PRK10073 223 SRLPRQGNKNLNYQRHYIK 241
BcsA COG1215
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1, ...
3-122 3.72e-28

Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility];


Pssm-ID: 440828 [Multi-domain]  Cd Length: 303  Bit Score: 109.45  E-value: 3.72e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   3 RQPMLTVIMPVYNMEKYLGRALEALAKQK--DKNFKLLIVNDGSKDKTREVAEGYRDRFLYFDII-NKKNGGLSDARNVG 79
Cdd:COG1215   27 DLPRVSVIIPAYNEEAVIEETLRSLLAQDypKEKLEVIVVDDGSTDETAEIARELAAEYPRVRVIeRPENGGKAAALNAG 106
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 896127997  80 MAHVTTPYFTFHDGDDWVDPGYTAYFVRAFdEHPDVDIVSCGF 122
Cdd:COG1215  107 LKAARGDIVVFLDADTVLDPDWLRRLVAAF-ADPGVGASGANL 148
WcaE COG1216
Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism];
3-109 1.04e-22

Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism];


Pssm-ID: 440829 [Multi-domain]  Cd Length: 202  Bit Score: 92.36  E-value: 1.04e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   3 RQPMLTVIMPVYNMEKYLGRALEALAKQKDKNFKLLIVNDGSKDKTREVAEGYRDRFLYFdIINKKNGGLSDARNVGMAH 82
Cdd:COG1216    1 MRPKVSVVIPTYNRPELLRRCLESLLAQTYPPFEVIVVDNGSTDGTAELLAALAFPRVRV-IRNPENLGFAAARNLGLRA 79
                         90       100
                 ....*....|....*....|....*..
gi 896127997  83 VTTPYFTFHDGDDWVDPGYTAYFVRAF 109
Cdd:COG1216   80 AGGDYLLFLDDDTVVEPDWLERLLAAA 106
GT_2_WfgS_like cd06433
WfgS and WfeV are involved in O-antigen biosynthesis; Escherichia coli WfgS and Shigella ...
8-211 1.35e-21

WfgS and WfeV are involved in O-antigen biosynthesis; Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133055 [Multi-domain]  Cd Length: 202  Bit Score: 89.53  E-value: 1.35e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   8 TVIMPVYNMEKYLGRALEALAKQKDKNFKLLIVNDGSKDKTREVAEGYRDRFLYFdiINKKNGGLSDARNVGMAHVTTPY 87
Cdd:cd06433    1 SIITPTYNQAETLEETIDSVLSQTYPNIEYIVIDGGSTDGTVDIIKKYEDKITYW--ISEPDKGIYDAMNKGIALATGDI 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997  88 FTFHDGDDWVDPGYTAYFVRAFDEHPDVDIVSCGFWIDSEKRHEshpvgnKQSGGLIDKREAYLKMTNVFGSPVkgyTWn 167
Cdd:cd06433   79 IGFLNSDDTLLPGALLAVVAAFAEHPEVDVVYGDVLLVDENGRV------IGRRRPPPFLDKFLLYGMPICHQA---TF- 148
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 896127997 168 kgYKISVVKKYHLrFVEDLAFMEDQIFNVKYVSLTNGFYYSPTP 211
Cdd:cd06433  149 --FRRSLFEKYGG-FDESYRIAADYDLLLRLLLAGKIFKYLPEV 189
CESA_like cd06423
CESA_like is the cellulose synthase superfamily; The cellulose synthase (CESA) superfamily ...
9-119 2.01e-18

CESA_like is the cellulose synthase superfamily; The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of Glucan.


Pssm-ID: 133045 [Multi-domain]  Cd Length: 180  Bit Score: 80.35  E-value: 2.01e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   9 VIMPVYNMEKYLGRALEALAKQKDKNFKLLIVNDGSKDKTREVAEGYRDRFLYFDII--NKKNGGLSDARNVGMAHVTTP 86
Cdd:cd06423    1 IIVPAYNEEAVIERTIESLLALDYPKLEVIVVDDGSTDDTLEILEELAALYIRRVLVvrDKENGGKAGALNAGLRHAKGD 80
                         90       100       110
                 ....*....|....*....|....*....|...
gi 896127997  87 YFTFHDGDDWVDPGYTAYFVRAFDEHPDVDIVS 119
Cdd:cd06423   81 IVVVLDADTILEPDALKRLVVPFFADPKVGAVQ 113
GT_2_like_c cd04186
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ...
9-120 5.42e-17

Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133029 [Multi-domain]  Cd Length: 166  Bit Score: 76.06  E-value: 5.42e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   9 VIMPVYNMEKYLGRALEALAKQKDKNFKLLIVNDGSKDKTREVAEGYRDRFLYfdIINKKNGGLSDARNVGMAHVTTPYF 88
Cdd:cd04186    1 IIIVNYNSLEYLKACLDSLLAQTYPDFEVIVVDNASTDGSVELLRELFPEVRL--IRNGENLGFGAGNNQGIREAKGDYV 78
                         90       100       110
                 ....*....|....*....|....*....|..
gi 896127997  89 TFHDGDDWVDPGYTAYFVRAFDEHPDVDIVSC 120
Cdd:cd04186   79 LLLNPDTVVEPGALLELLDAAEQDPDVGIVGP 110
Succinoglycan_BP_ExoA cd02525
ExoA is involved in the biosynthesis of succinoglycan; Succinoglycan Biosynthesis Protein ExoA ...
8-118 1.38e-14

ExoA is involved in the biosynthesis of succinoglycan; Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.


Pssm-ID: 133016 [Multi-domain]  Cd Length: 249  Bit Score: 71.49  E-value: 1.38e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   8 TVIMPVYNMEKYLGRALEALAKQKD--KNFKLLIVNDGSKDKTREVAEGYRDRFLYFDIINKKNGGLSDARNVGMAHVTT 85
Cdd:cd02525    3 SIIIPVRNEEKYIEELLESLLNQSYpkDLIEIIVVDGGSTDGTREIVQEYAAKDPRIRLIDNPKRIQSAGLNIGIRNSRG 82
                         90       100       110
                 ....*....|....*....|....*....|...
gi 896127997  86 PYFTFHDGDDWVDPGYTAYFVRAFdEHPDVDIV 118
Cdd:cd02525   83 DIIIRVDAHAVYPKDYILELVEAL-KRTGADNV 114
CESA_like_1 cd06439
CESA_like_1 is a member of the cellulose synthase (CESA) superfamily; This is a subfamily of ...
4-120 2.01e-14

CESA_like_1 is a member of the cellulose synthase (CESA) superfamily; This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.


Pssm-ID: 133061 [Multi-domain]  Cd Length: 251  Bit Score: 71.07  E-value: 2.01e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   4 QPMLTVIMPVYNMEKYLGRALEALAKQ---KDKnFKLLIVNDGSKDKTREVAEGYRDRFLYFdIINKKNGGLSDARNVGM 80
Cdd:cd06439   28 LPTVTIIIPAYNEEAVIEAKLENLLALdypRDR-LEIIVVSDGSTDGTAEIAREYADKGVKL-LRFPERRGKAAALNRAL 105
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 896127997  81 AHVTTPYFTFHDGDDWVDPGYTAYFVRAFdEHPDVDIVSC 120
Cdd:cd06439  106 ALATGEIVVFTDANALLDPDALRLLVRHF-ADPSVGAVSG 144
GT_2_like_d cd04196
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ...
8-124 6.82e-14

Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133039 [Multi-domain]  Cd Length: 214  Bit Score: 68.81  E-value: 6.82e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   8 TVIMPVYNMEKYLGRALEALAKQKDKNFKLLIVNDGSKDKTREVAEGY--RDRFLYFDIINKKNGGLsdARNV--GMAHV 83
Cdd:cd04196    1 AVLMATYNGEKYLREQLDSILAQTYKNDELIISDDGSTDGTVEIIKEYidKDPFIIILIRNGKNLGV--ARNFesLLQAA 78
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 896127997  84 TTPYFTFHDGDD-WvDPGYTAYFVRAFDEHPDVDIVSCGFWI 124
Cdd:cd04196   79 DGDYVFFCDQDDiW-LPDKLERLLKAFLKDDKPLLVYSDLEL 119
DPM_DPG-synthase_like cd04179
DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily; DPM1 is the ...
9-118 2.58e-13

DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.


Pssm-ID: 133022 [Multi-domain]  Cd Length: 185  Bit Score: 66.83  E-value: 2.58e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   9 VIMPVYNMEKYLGRALEAL--AKQKDKNFKLLIVNDGSKDKTREVAEGYRDRFLYFDII-NKKNGGLSDARNVGMAHVTT 85
Cdd:cd04179    1 VVIPAYNEEENIPELVERLlaVLEEGYDYEIIVVDDGSTDGTAEIARELAARVPRVRVIrLSRNFGKGAAVRAGFKAARG 80
                         90       100       110
                 ....*....|....*....|....*....|...
gi 896127997  86 PYFTFHDGDDWVDPGYTAYFVRAFDEHpDVDIV 118
Cdd:cd04179   81 DIVVTMDADLQHPPEDIPKLLEKLLEG-GADVV 112
GT2_RfbC_Mx_like cd04184
Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis; The rfbC gene ...
5-118 2.96e-13

Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis; The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.


Pssm-ID: 133027 [Multi-domain]  Cd Length: 202  Bit Score: 66.84  E-value: 2.96e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   5 PMLTVIMPVYNM-EKYLGRALEALAKQKDKNFKLLIVNDGS-KDKTREVAEGY--RDRFLYFdIINKKNGGLSDARNVGM 80
Cdd:cd04184    1 PLISIVMPVYNTpEKYLREAIESVRAQTYPNWELCIADDAStDPEVKRVLKKYaaQDPRIKV-VFREENGGISAATNSAL 79
                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 896127997  81 AHVTTPYFTFHDGDDWVDPGYTAYFVRAFDEHPDVDIV 118
Cdd:cd04184   80 ELATGEFVALLDHDDELAPHALYEVVKALNEHPDADLI 117
Glyco_tranf_2_3 pfam13641
Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include ...
4-120 5.74e-12

Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis.


Pssm-ID: 433372 [Multi-domain]  Cd Length: 230  Bit Score: 63.93  E-value: 5.74e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997    4 QPMLTVIMPVYNMEKYLGRALEALAKQKDKNFKLLIVNDGSKDKTREVAEGYRDRFLYFD---IINKKNGGL---SDARN 77
Cdd:pfam13641   1 PPDVSVVVPAFNEDSVLGRVLEAILAQPYPPVEVVVVVNPSDAETLDVAEEIAARFPDVRlrvIRNARLLGPtgkSRGLN 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 896127997   78 VGMAHVTTPYFTFHDGDDWVDPGYTAYFVRAFDeHPDVDIVSC 120
Cdd:pfam13641  81 HGFRAVKSDLVVLHDDDSVLHPGTLKKYVQYFD-SPKVGAVGT 122
Beta4Glucosyltransferase cd02511
UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of ...
6-99 2.46e-11

UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide; UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.


Pssm-ID: 133005 [Multi-domain]  Cd Length: 229  Bit Score: 61.92  E-value: 2.46e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   6 MLTVIMPVYNMEKYLGRALEALAKQKDKnfkLLIVNDGSKDKTREVAEGYRDRFLYFdiinkKNGGLSDARNVGMAHVTT 85
Cdd:cd02511    1 TLSVVIITKNEERNIERCLESVKWAVDE---IIVVDSGSTDRTVEIAKEYGAKVYQR-----WWDGFGAQRNFALELATN 72
                         90
                 ....*....|....
gi 896127997  86 PYFTFHDGDDWVDP 99
Cdd:cd02511   73 DWVLSLDADERLTP 86
DPG_synthase cd04188
DPG_synthase is involved in protein N-linked glycosylation; UDP-glucose:dolichyl-phosphate ...
9-94 2.78e-11

DPG_synthase is involved in protein N-linked glycosylation; UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.


Pssm-ID: 133031 [Multi-domain]  Cd Length: 211  Bit Score: 61.43  E-value: 2.78e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   9 VIMPVYNMEKYLGRALEA----LAKQKDKNFKLLIVNDGSKDKTREVAEGY-RDRFLYFDII-NKKNGGLSDARNVGMAH 82
Cdd:cd04188    1 VVIPAYNEEKRLPPTLEEaveyLEERPSFSYEIIVVDDGSKDGTAEVARKLaRKNPALIRVLtLPKNRGKGGAVRAGMLA 80
                         90
                 ....*....|..
gi 896127997  83 VTTPYFTFHDGD 94
Cdd:cd04188   81 ARGDYILFADAD 92
GT2_AmsE_like cd04195
GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis; AmsE is a ...
8-122 2.50e-10

GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis; AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.


Pssm-ID: 133038 [Multi-domain]  Cd Length: 201  Bit Score: 58.48  E-value: 2.50e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   8 TVIMPVYNMEK--YLGRALEALAKQKDKNFKLLIVNDGS-KDKTREVAEGYRDRFLYFDIINKKNGGLSDARNVGMAHVT 84
Cdd:cd04195    1 SVLMSVYIKEKpeFLREALESILKQTLPPDEVVLVKDGPvTQSLNEVLEEFKRKLPLKVVPLEKNRGLGKALNEGLKHCT 80
                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 896127997  85 TPYFTFHDGDDWVDPGYTAYFVRAFDEHPDVDIVSCGF 122
Cdd:cd04195   81 YDWVARMDTDDISLPDRFEKQLDFIEKNPEIDIVGGGV 118
beta3GnTL1_like cd06913
Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of ...
9-99 6.91e-10

Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine ; This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.


Pssm-ID: 133063 [Multi-domain]  Cd Length: 219  Bit Score: 57.47  E-value: 6.91e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   9 VIMPVYNMEKYLGRALEALAKQKDKN-FKLLIVNDGSKDKTREVAEGYRDRFLYFDIINKKNGGLSD-------ARNVGM 80
Cdd:cd06913    1 IILPVHNGEQWLDECLESVLQQDFEGtLELSVFNDASTDKSAEIIEKWRKKLEDSGVIVLVGSHNSPspkgvgyAKNQAI 80
                         90
                 ....*....|....*....
gi 896127997  81 AHVTTPYFTFHDGDDWVDP 99
Cdd:cd06913   81 AQSSGRYLCFLDSDDVMMP 99
GT2_Chondriotin_Pol_N cd06420
N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase; Chondroitin ...
9-97 9.65e-09

N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase; Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm to undergo cytokinesis and cell division. Chondroitin is synthesized as proteoglycans, sulfated and secreted to the cell surface or extracellular matrix.


Pssm-ID: 133042 [Multi-domain]  Cd Length: 182  Bit Score: 53.74  E-value: 9.65e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   9 VIMPVYNMEKYLGRALEALAKQKDKNFKLLIVNDGSKDKTREVAEGYRDRFLyFDIIN---KKNG-GLSDARNVGMAHVT 84
Cdd:cd06420    1 LIITTYNRPEALELVLKSVLNQSILPFEVIIADDGSTEETKELIEEFKSQFP-IPIKHvwqEDEGfRKAKIRNKAIAAAK 79
                         90
                 ....*....|....*...
gi 896127997  85 TPYFTFHDGD-----DWV 97
Cdd:cd06420   80 GDYLIFIDGDciphpDFI 97
Glyco_tranf_2_2 pfam10111
Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include ...
8-99 2.46e-08

Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis.


Pssm-ID: 313356 [Multi-domain]  Cd Length: 276  Bit Score: 53.82  E-value: 2.46e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997    8 TVIMPVYNMEK--YLGRALEALAKQKDKNFKLLIVNDGSKDKTREVAEGYRDRFL--YFDIINKKNGGLSDARNVGMAHV 83
Cdd:pfam10111   1 SVVIPVYNGEKthWIQERILNQTFQYDPEFELIIINDGSTDKTLEEVSSIKDHNLqvYYPNAPDTTYSLAASRNRGTSHA 80
                          90
                  ....*....|....*.
gi 896127997   84 TTPYFTFHDGDDWVDP 99
Cdd:pfam10111  81 IGEYISFIDGDCLWSP 96
DPM1_like cd06442
DPM1_like represents putative enzymes similar to eukaryotic DPM1; Proteins similar to ...
9-118 4.77e-08

DPM1_like represents putative enzymes similar to eukaryotic DPM1; Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. This protein family belongs to Glycosyltransferase 2 superfamily.


Pssm-ID: 133062 [Multi-domain]  Cd Length: 224  Bit Score: 52.54  E-value: 4.77e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   9 VIMPVYNMEKYLGRALEALAKQ-KDKNFKLLIVNDGSKDKTREVAEGYRDRFLYFDII-NKKNGGLSDARNVGMAHVTTP 86
Cdd:cd06442    1 IIIPTYNERENIPELIERLDAAlKGIDYEIIVVDDNSPDGTAEIVRELAKEYPRVRLIvRPGKRGLGSAYIEGFKAARGD 80
                         90       100       110
                 ....*....|....*....|....*....|..
gi 896127997  87 YFTFHDGDDWVDPGYTAYFVRAfDEHPDVDIV 118
Cdd:cd06442   81 VIVVMDADLSHPPEYIPELLEA-QLEGGADLV 111
GT_2_like_a cd02522
GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function; ...
7-60 3.83e-07

GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function; Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133013 [Multi-domain]  Cd Length: 221  Bit Score: 49.49  E-value: 3.83e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 896127997   7 LTVIMPVYNMEKYLGRALEALAKQKDKNFKLLIVNDGSKDKTREVAEGYRDRFL 60
Cdd:cd02522    1 LSIIIPTLNEAENLPRLLASLRRLNPLPLEIIVVDGGSTDGTVAIARSAGVVVI 54
DPM1_like_bac cd04187
Bacterial DPM1_like enzymes are related to eukaryotic DPM1; A family of bacterial enzymes ...
9-58 6.73e-07

Bacterial DPM1_like enzymes are related to eukaryotic DPM1; A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.


Pssm-ID: 133030 [Multi-domain]  Cd Length: 181  Bit Score: 48.24  E-value: 6.73e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 896127997   9 VIMPVYNMEKYLG---RALEALAKQKDKNFKLLIVNDGSKDKTREVAEGYRDR 58
Cdd:cd04187    1 IVVPVYNEEENLPelyERLKAVLESLGYDYEIIFVDDGSTDRTLEILRELAAR 53
GT_2_like_e cd04192
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ...
9-147 7.56e-07

Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133035 [Multi-domain]  Cd Length: 229  Bit Score: 48.82  E-value: 7.56e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   9 VIMPVYNMEKYLGRALEALAKQK--DKNFKLLIVNDGSKDKTREVAEGYR---DRFLYfdIINKKNGGLS---DARNVGM 80
Cdd:cd04192    1 VVIAARNEAENLPRLLQSLSALDypKEKFEVILVDDHSTDGTVQILEFAAakpNFQLK--ILNNSRVSISgkkNALTTAI 78
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 896127997  81 AHVTTPYFTFHDGDDWVDPGYTAYFVRAFDEHPDVDIVScgfwidsekrheshPVGNKQSGGLIDKR 147
Cdd:cd04192   79 KAAKGDWIVTTDADCVVPSNWLLTFVAFIQKEQIGLVAG--------------PVIYFKGKSLLAKF 131
PTZ00260 PTZ00260
dolichyl-phosphate beta-glucosyltransferase; Provisional
7-94 2.13e-06

dolichyl-phosphate beta-glucosyltransferase; Provisional


Pssm-ID: 240336 [Multi-domain]  Cd Length: 333  Bit Score: 48.22  E-value: 2.13e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   7 LTVIMPVYNMEKYLGRALEALAK------QKDKNFK--LLIVNDGSKDKTREVAEGYRdRFLYFDIIN------KKNGGL 72
Cdd:PTZ00260  72 LSIVIPAYNEEDRLPKMLKETIKylesrsRKDPKFKyeIIIVNDGSKDKTLKVAKDFW-RQNINPNIDirllslLRNKGK 150
                         90       100
                 ....*....|....*....|..
gi 896127997  73 SDARNVGMAHVTTPYFTFHDGD 94
Cdd:PTZ00260 151 GGAVRIGMLASRGKYILMVDAD 172
GT2_HAS cd06434
Hyaluronan synthases catalyze polymerization of hyaluronan; Hyaluronan synthases (HASs) are ...
7-119 2.24e-06

Hyaluronan synthases catalyze polymerization of hyaluronan; Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.


Pssm-ID: 133056 [Multi-domain]  Cd Length: 235  Bit Score: 47.63  E-value: 2.24e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   7 LTVIMPVYNM-EKYLGRALEALAKQKDKnfKLLIVNDGSKDKTREV---AEGYRDRFlyfdIINKKNGGLSDARNVGMAH 82
Cdd:cd06434    2 VTVIIPVYDEdPDVFRECLRSILRQKPL--EIIVVTDGDDEPYLSIlsqTVKYGGIF----VITVPHPGKRRALAEGIRH 75
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 896127997  83 VTTPYFTFHDGDDWVDPGYTAYFVRAFDEhPDVDIVS 119
Cdd:cd06434   76 VTTDIVVLLDSDTVWPPNALPEMLKPFED-PKVGGVG 111
GT_2_like_b cd04185
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ...
14-97 1.38e-05

Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133028 [Multi-domain]  Cd Length: 202  Bit Score: 44.93  E-value: 1.38e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997  14 YNMEKYLGRALEALAKQKDKNFKLLIVNDGSKDKTREV--AEGYRDRFLYfdIINKKNGGLSDARNVGMAHVttpyftFH 91
Cdd:cd04185    6 YNRLDLLKECLDALLAQTRPPDHIIVIDNASTDGTAEWltSLGDLDNIVY--LRLPENLGGAGGFYEGVRRA------YE 77

                 ....*.
gi 896127997  92 DGDDWV 97
Cdd:cd04185   78 LGYDWI 83
PRK10018 PRK10018
colanic acid biosynthesis glycosyltransferase WcaA;
1-106 3.49e-04

colanic acid biosynthesis glycosyltransferase WcaA;


Pssm-ID: 182197 [Multi-domain]  Cd Length: 279  Bit Score: 41.13  E-value: 3.49e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   1 MLRQPMLTVIMPVYNMEKYLGRALEALAKQKDKNFKLLIVNDGSK--DKTREVAEGYRD-RFLYfdIINKKNGGLSDARN 77
Cdd:PRK10018   1 MKDNPLISIYMPTWNRQQLAIRAIKSVLRQDYSNWEMIIVDDCSTswEQLQQYVTALNDpRITY--IHNDINSGACAVRN 78
                         90       100
                 ....*....|....*....|....*....
gi 896127997  78 VGMAHVTTPYFTFHDGDDWVDPGYTAYFV 106
Cdd:PRK10018  79 QAIMLAQGEYITGIDDDDEWTPNRLSVFL 107
CESA_CaSu_A2 cd06437
Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit ...
5-94 1.66e-03

Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex; Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants were significantly smaller, while the single mutant plants were almost normal.


Pssm-ID: 133059 [Multi-domain]  Cd Length: 232  Bit Score: 38.83  E-value: 1.66e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   5 PMLTVIMPVYNmEKYL-GRALEALAKQKDKNFKLLI-VNDGSKDKT----REVAEGYRDRFLY--FDIINKKNGGLSDAR 76
Cdd:cd06437    1 PMVTVQLPVFN-EKYVvERLIEAACALDYPKDRLEIqVLDDSTDETvrlaREIVEEYAAQGVNikHVRRADRTGYKAGAL 79
                         90
                 ....*....|....*...
gi 896127997  77 NVGMAHVTTPYFTFHDGD 94
Cdd:cd06437   80 AEGMKVAKGEYVAIFDAD 97
PLN02726 PLN02726
dolichyl-phosphate beta-D-mannosyltransferase
3-119 2.12e-03

dolichyl-phosphate beta-D-mannosyltransferase


Pssm-ID: 215385 [Multi-domain]  Cd Length: 243  Bit Score: 38.53  E-value: 2.12e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896127997   3 RQPMLTVIMPVYNMEKYLG-------RALEALakqkdKNFKLLIVNDGSKDKTREVAEG----YRDRFLyfdIINKKNG- 70
Cdd:PLN02726   7 GAMKYSIIVPTYNERLNIAlivylifKALQDV-----KDFEIIVVDDGSPDGTQDVVKQlqkvYGEDRI---LLRPRPGk 78
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 896127997  71 -GLSDARNVGMAHVTTPYFTFHDGDDWVDPGYTAYFVRAFDEhPDVDIVS 119
Cdd:PLN02726  79 lGLGTAYIHGLKHASGDFVVIMDADLSHHPKYLPSFIKKQRE-TGADIVT 127
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH