MULTISPECIES: polyprenyltransferase [Rothia]
Protein Classification
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| MpPF26 super family | cl06629 | M penetrans paralogue family 26; These proteins include those ascribed to M penetrans ... |
110-178 | 1.00e-06 | ||
M penetrans paralogue family 26; These proteins include those ascribed to M penetrans paralogue family 26 in. This family contains a region of transmembrane helices. The actual alignment was detected with superfamily member NF040945: Pssm-ID: 471468 Cd Length: 99 Bit Score: 45.55 E-value: 1.00e-06
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| Name | Accession | Description | Interval | E-value | ||
| CCC_membrane | NF040945 | CCC motif membrane protein; Members of this family average about 150 amino acids in length and ... |
110-178 | 1.00e-06 | ||
CCC motif membrane protein; Members of this family average about 150 amino acids in length and are hydrophobic, with several probable transmembrane alpha helices. A notable feature is a Cys-rich cluster, often CCC, starting at about position 22. Members of both this family and NF040944 previously were both included in Pfam model PF07666. But while both families are hydrophobic, they appear not to be truly homologous. NF040944 identifies members of a paralogous family in Mycoplasma penetrans that includes protein MYPE2350, and consequently some members of this family have carried names suggesting (improperly, we think) a relationship to that family. Pssm-ID: 468876 Cd Length: 99 Bit Score: 45.55 E-value: 1.00e-06
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| Name | Accession | Description | Interval | E-value | ||
| CCC_membrane | NF040945 | CCC motif membrane protein; Members of this family average about 150 amino acids in length and ... |
110-178 | 1.00e-06 | ||
CCC motif membrane protein; Members of this family average about 150 amino acids in length and are hydrophobic, with several probable transmembrane alpha helices. A notable feature is a Cys-rich cluster, often CCC, starting at about position 22. Members of both this family and NF040944 previously were both included in Pfam model PF07666. But while both families are hydrophobic, they appear not to be truly homologous. NF040944 identifies members of a paralogous family in Mycoplasma penetrans that includes protein MYPE2350, and consequently some members of this family have carried names suggesting (improperly, we think) a relationship to that family. Pssm-ID: 468876 Cd Length: 99 Bit Score: 45.55 E-value: 1.00e-06
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| Blast search parameters | ||||
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